BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780381|ref|YP_003064794.1| flagellar basal body rod
protein FlgB [Candidatus Liberibacter asiaticus str. psy62]
(130 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780381|ref|YP_003064794.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040058|gb|ACT56854.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
asiaticus str. psy62]
Length = 130
Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET
Sbjct: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL
Sbjct: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
Query: 121 NSMVMHVVRG 130
NSMVMHVVRG
Sbjct: 121 NSMVMHVVRG 130
>gi|315121850|ref|YP_004062339.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495252|gb|ADR51851.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 183
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 112/130 (86%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQPITFF+IASQHANWLSERQK+VSENIANASTP YR+KDIS+FET+LN N MARTHE
Sbjct: 54 MQPITFFEIASQHANWLSERQKVVSENIANASTPGYRSKDISAFETVLNDNIAMARTHEA 113
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HLK D G + + I+APL Q GVQVSGNTVGITNELYK+G+IK+LYELNT+L+KKL
Sbjct: 114 HLKAMDFDGFYRHVRTIQAPLYQPIGVQVSGNTVGITNELYKAGNIKHLYELNTRLVKKL 173
Query: 121 NSMVMHVVRG 130
N M+MHVV+G
Sbjct: 174 NYMMMHVVKG 183
>gi|116250479|ref|YP_766317.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255127|emb|CAK06201.1| putative flagellar basal-body rod protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 130
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L N N MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDNSNINMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D S + V +A LDQ GVQ SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHLSGNDFSD-SGDIDVKDAALDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|209547925|ref|YP_002279842.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533681|gb|ACI53616.1| flagellar basal-body rod protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 130
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L++ + MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D S + V +A LDQ GVQ SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHLSGNDFSA-SGDIDVKDASLDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|86356309|ref|YP_468201.1| flagellar basal body rod protein FlgB [Rhizobium etli CFN 42]
gi|86280411|gb|ABC89474.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
Length = 130
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L++ + MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDRSDITMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +D S + V EA LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHFSGNDFSD-SGDIDVKEAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|241203103|ref|YP_002974199.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856993|gb|ACS54660.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 130
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP + AKD++ F+ +L N N MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFHAKDVTPFDAVLDNSNINMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D S + V +A LDQ GVQ SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHLSGNDFSD-SGDIDVKDAALDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|190890360|ref|YP_001976902.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
gi|190695639|gb|ACE89724.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
Length = 130
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L++ + MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHFSGNDFSETG-DIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|327193033|gb|EGE59945.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
Length = 130
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L++ + M RT+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMTRTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHFSGNDFSETG-DIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|222084862|ref|YP_002543391.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
gi|221722310|gb|ACM25466.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
Length = 130
Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
MQPI F +AS+ A WL RQ++V+ NIANA+TP +RAKD++ F+ +L NQN MA+T+
Sbjct: 1 MQPIQLFDLASRQAEWLQTRQEVVAGNIANANTPKFRAKDVTPFQAVLDNQNVGMAKTNP 60
Query: 60 THLK--ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL E SG + +V EA L+Q GVQ SGNTVG+ +EL KSG IK Y LNT L+
Sbjct: 61 AHLSGNEFSQSG---DINVEEASLNQEIGVQESGNTVGLEDELAKSGEIKRQYSLNTALV 117
Query: 118 KKLNSMVMHVVR 129
+ M++ V+
Sbjct: 118 SSFHRMMLMTVK 129
>gi|218460744|ref|ZP_03500835.1| flagellar basal body rod protein FlgB [Rhizobium etli Kim 5]
Length = 142
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L++ + MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDRSDIAMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
HL +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L
Sbjct: 61 AHLSGNDFSD-SGDIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSL 116
>gi|222147568|ref|YP_002548525.1| flagellar basal body rod protein FlgB [Agrobacterium vitis S4]
gi|221734556|gb|ACM35519.1| flagellar basal-body rod protein FlgB [Agrobacterium vitis S4]
Length = 130
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-QNFLMARTHE 59
M+PI F +AS+ A WLS RQ++++ NIANA+TP + AKDI+ F IL+ + F MART+
Sbjct: 1 MEPIKLFDVASRQAEWLSLRQEVIAGNIANANTPKFMAKDITPFNAILDVRQFGMARTNS 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ SD + + + EAPL+ GVQVSGN+V + +E+ K G I+ + LNT L+
Sbjct: 61 KHMASSDLN-TDLDVDIREAPLNGEIGVQVSGNSVALADEMTKMGEIQRQHSLNTNLVSS 119
Query: 120 LNSMVMHVVRG 130
N M++ V+G
Sbjct: 120 FNRMMLMTVKG 130
>gi|15964412|ref|NP_384765.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti 1021]
gi|307311554|ref|ZP_07591195.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
BL225C]
gi|307318909|ref|ZP_07598340.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
gi|3894106|emb|CAA11959.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
gi|15073589|emb|CAC45231.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
gi|306895323|gb|EFN26078.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
gi|306899571|gb|EFN30200.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
BL225C]
Length = 126
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M+PI F++AS+ A WL+ RQ +V+ NIANA+TP+YRAKD+ FE++L N MA TH
Sbjct: 1 MEPIQLFELASRQAQWLTVRQNVVAGNIANANTPHYRAKDVQPFESVLQNTGIQMAATHR 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ES + AHV E VQ SGNTV + EL K+G IK YELN L+K
Sbjct: 61 AHFTESPEA-----AHVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKS 115
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 116 FHRMILMTVR 125
>gi|20141426|sp|Q44335|FLGB_AGRT5 RecName: Full=Flagellar basal-body rod protein flgB
Length = 134
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ +Q MART
Sbjct: 5 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ HL ES L N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 65 NPAHLGEST---LSENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 121
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 122 KSFHRMMLMTVK 133
>gi|2459711|gb|AAB71787.1| FlgB [Agrobacterium tumefaciens]
Length = 134
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ +Q MART
Sbjct: 5 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ HL ES L N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 65 NPVHLGEST---LSENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 121
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 122 KSFHRMMLMTVK 133
>gi|159184364|ref|NP_353582.2| flagellar basal body rod protein FlgB [Agrobacterium tumefaciens
str. C58]
gi|159139678|gb|AAK86367.2| flagellar basal-body rod protein FlgB [Agrobacterium tumefaciens
str. C58]
Length = 130
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ +Q MART
Sbjct: 1 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 60
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ HL ES L N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 61 NPAHLGEST---LSENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 117
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 118 KSFHRMMLMTVK 129
>gi|227820855|ref|YP_002824825.1| flagellar basal body rod protein FlgB [Sinorhizobium fredii NGR234]
gi|227339854|gb|ACP24072.1| putative flagellar basal-body rod protein FlgB [Sinorhizobium
fredii NGR234]
Length = 126
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M PI F++AS+ A WL+ RQ +V+ NIANA+TP+YRAKD+ FE++L N MA TH
Sbjct: 1 MDPIQLFELASRQAQWLTVRQNVVAGNIANANTPHYRAKDVQPFESVLQNTGVQMAATHR 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ES + A V + + VQ SGNTV + E+ K+G IK YELN+ L+K
Sbjct: 61 AHFTESPDA-----AQVTDVGMIDDVAVQQSGNTVALEQEMMKTGEIKRDYELNSGLVKS 115
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 116 FHRMMLMTVR 125
>gi|150395482|ref|YP_001325949.1| flagellar basal body rod protein FlgB [Sinorhizobium medicae
WSM419]
gi|150026997|gb|ABR59114.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
Length = 126
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M+PI F++AS+ A WLS RQ +V+ NIANA+TP+Y+A+D+ FE++L N MA TH
Sbjct: 1 MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHR 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ES + A V E VQ SGNTV + EL K+G IK YELN L+K
Sbjct: 61 AHFTESADA-----AQVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKS 115
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 116 FHRMILMTVR 125
>gi|1086558|gb|AAB68965.1| FlgB [Agrobacterium tumefaciens]
Length = 134
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ +Q MART
Sbjct: 5 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ +ES L N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 65 NPAPPREST---LSENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 121
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 122 KSFHRMMLMTVK 133
>gi|325291942|ref|YP_004277806.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
gi|325059795|gb|ADY63486.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
Length = 130
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
MQPI F +AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ +Q MA+T
Sbjct: 1 MQPIQLFDLASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMAKT 60
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H H S+ L N V + P++ G+Q SGN+V + E+ K+G IK Y+LN L+
Sbjct: 61 HPAHFGASE---LSENIAVRDNPINNEIGMQESGNSVALAEEMTKTGEIKRQYDLNASLV 117
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 118 KSFHRMMLMTVK 129
>gi|163758012|ref|ZP_02165100.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
gi|162284301|gb|EDQ34584.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
Length = 125
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 82/132 (62%), Gaps = 11/132 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F++ S+ A+WL+ RQ +V+ NIAN +TP Y A+++++FE ++ + MA TH
Sbjct: 1 MQPIQLFELTSKQAHWLTVRQSVVAGNIANVNTPGYTAREVAAFEAVMQETGTRMAATHP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKLI 117
H++E G + ++ GV+V SGN+V + +EL K+G IK +YELN ++
Sbjct: 61 GHIQEDPMRGAVRS--------ERQNGVEVMPSGNSVNLPDELSKTGEIKRMYELNAGMV 112
Query: 118 KKLNSMVMHVVR 129
K + M++ VR
Sbjct: 113 KAFHRMMLLTVR 124
>gi|239834445|ref|ZP_04682773.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
3301]
gi|239822508|gb|EEQ94077.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
3301]
Length = 126
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M PI F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L MA T
Sbjct: 1 MGPIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGI---AGARLRPDDITEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|13472573|ref|NP_104140.1| flagellar basal body rod protein FlgB [Mesorhizobium loti
MAFF303099]
gi|14023319|dbj|BAB49926.1| flagellar basal-body rod protein; FlgB [Mesorhizobium loti
MAFF303099]
Length = 126
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+P++ F +A++ A WLS RQ ++ NIANA+TP Y A D+ FE +L++ + +T E
Sbjct: 1 MEPVSLFDLAAKQAQWLSVRQSAIAGNIANANTPGYTANDVEPFEKVLDRTAVSLQTTEA 60
Query: 61 -HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + NA P + + S NTV + ++L K+G ++ +ELNT ++K
Sbjct: 61 GHLGSAAT-----NAGFTVKPQEDDGVIMPSKNTVVLEDQLLKAGEVRRSFELNTAIVKA 115
Query: 120 LNSMVMHVVR 129
+SM+M V+
Sbjct: 116 FHSMMMMAVK 125
>gi|306846281|ref|ZP_07478842.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
gi|306273276|gb|EFM55145.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
Length = 126
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L MA T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGI---AATRLRPDDVTEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|254720613|ref|ZP_05182424.1| flagellar basal body rod protein FlgB [Brucella sp. 83/13]
gi|265985653|ref|ZP_06098388.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
gi|306838575|ref|ZP_07471412.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
gi|306841052|ref|ZP_07473776.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
gi|264664245|gb|EEZ34506.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
gi|306288941|gb|EFM60241.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
gi|306406361|gb|EFM62603.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
Length = 126
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L MA T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGI---AATRLRPDDITEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|121601960|ref|YP_989403.1| flagellar basal body rod protein FlgB [Bartonella bacilliformis
KC583]
gi|120614137|gb|ABM44738.1| flagellar basal-body rod protein FlgB [Bartonella bacilliformis
KC583]
Length = 128
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M P+ F +AS+ A WLS RQK V+ N+ANA+TP Y+A+D+ +F I+ N+ M TH
Sbjct: 1 MDPVNLFDLASKQAEWLSVRQKAVASNVANANTPGYQARDVQNFTDIVQNKAISMKVTHV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ A VI D GV SGN V + E+ K I LNT ++K
Sbjct: 61 QHMDLTENG---MEAQVIRP--DNAGGVTHSGNNVNLEEEMSKGAAIGREMSLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMLTVRG 126
>gi|300024609|ref|YP_003757220.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299526430|gb|ADJ24899.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 125
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQP+ F +A + WL++RQ ++S+N+ANA+TP Y+A+D+ SFE + + MA T+
Sbjct: 1 MQPLQLFDLAFRQNEWLAQRQSVISQNVANANTPGYKARDVESFEDAMRKAVPMAVTNPD 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + GL + +Q V VSGN V + E KSG + Y +NT++++
Sbjct: 61 HFSPA-GDGL---VQARDNDPNQAE-VLVSGNDVSLEQEFLKSGEVMRGYSMNTQIMRTF 115
Query: 121 NSMVMHVVRG 130
+ M+ V +G
Sbjct: 116 SGMLRSVTKG 125
>gi|153011527|ref|YP_001372741.1| flagellar basal body rod protein FlgB [Ochrobactrum anthropi ATCC
49188]
gi|151563415|gb|ABS16912.1| flagellar basal-body rod protein FlgB [Ochrobactrum anthropi ATCC
49188]
Length = 126
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L MA T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL ES + G+ + +QT SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-ESGADGITGARLRPDDITEQTH----SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|62317100|ref|YP_222953.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 1 str.
9-941]
gi|83269092|ref|YP_418383.1| flagellar basal body rod protein FlgB [Brucella melitensis biovar
Abortus 2308]
gi|189022365|ref|YP_001932106.1| flagellar basal body rod protein FlgB [Brucella abortus S19]
gi|237816662|ref|ZP_04595654.1| flagellar basal-body rod protein FlgB [Brucella abortus str. 2308
A]
gi|254691415|ref|ZP_05154669.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 6 str.
870]
gi|254695287|ref|ZP_05157115.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 3 str.
Tulya]
gi|254698385|ref|ZP_05160213.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 2 str.
86/8/59]
gi|254731830|ref|ZP_05190408.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 4 str.
292]
gi|256256601|ref|ZP_05462137.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 9 str.
C68]
gi|260544338|ref|ZP_05820159.1| flagellar basal-body rod protein FlgB [Brucella abortus NCTC 8038]
gi|260757029|ref|ZP_05869377.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 6 str.
870]
gi|260759599|ref|ZP_05871947.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 4 str.
292]
gi|260762843|ref|ZP_05875175.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 2 str.
86/8/59]
gi|260882839|ref|ZP_05894453.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 9 str.
C68]
gi|261215656|ref|ZP_05929937.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 3 str.
Tulya]
gi|297249957|ref|ZP_06933658.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 5 str.
B3196]
gi|62197293|gb|AAX75592.1| FlgB, flagellar basal-body rod protein [Brucella abortus bv. 1 str.
9-941]
gi|82939366|emb|CAJ12314.1| Flagellar basal-body rod protein FlgB [Brucella melitensis biovar
Abortus 2308]
gi|189020939|gb|ACD73660.1| Flagellar basal-body rod protein FlgB [Brucella abortus S19]
gi|237787475|gb|EEP61691.1| flagellar basal-body rod protein FlgB [Brucella abortus str. 2308
A]
gi|260097609|gb|EEW81483.1| flagellar basal-body rod protein FlgB [Brucella abortus NCTC 8038]
gi|260669917|gb|EEX56857.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 4 str.
292]
gi|260673264|gb|EEX60085.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 2 str.
86/8/59]
gi|260677137|gb|EEX63958.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 6 str.
870]
gi|260872367|gb|EEX79436.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 9 str.
C68]
gi|260917263|gb|EEX84124.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 3 str.
Tulya]
gi|297173826|gb|EFH33190.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 5 str.
B3196]
Length = 126
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA TP++RA+D+ F +L++ L M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANADTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGI---AATRLRPDDVTEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|328545508|ref|YP_004305617.1| flagellar basal-body rod protein B [polymorphum gilvum SL003B-26A1]
gi|326415249|gb|ADZ72312.1| Flagellar basal-body rod protein B [Polymorphum gilvum SL003B-26A1]
Length = 126
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M+P+ ++ASQH +WLS RQ ++ENIAN+ TP + A+D+ F ++ +Q L M TH
Sbjct: 1 MEPVYLTKLASQHNDWLSVRQATIAENIANSDTPGFAARDVVPFASVFDQTRLAMTATHG 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ G A E +T V SGN+V + EL K+G + + LNT L K
Sbjct: 61 AHM-----GGAAEQAEPAEVEKSETWQVTHSGNSVSLEQELMKAGEVARSHALNTSLAKS 115
Query: 120 LNSMVMHVVRG 130
+ M + V+G
Sbjct: 116 FHRMYLASVKG 126
>gi|17989434|ref|NP_542067.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. 16M]
gi|23499913|ref|NP_699353.1| flagellar basal body rod protein FlgB [Brucella suis 1330]
gi|161620233|ref|YP_001594119.1| flagellar basal body rod protein FlgB [Brucella canis ATCC 23365]
gi|225628622|ref|ZP_03786656.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
gi|225686009|ref|YP_002733981.1| flagellar basal body rod protein FlgB [Brucella melitensis ATCC
23457]
gi|254702573|ref|ZP_05164401.1| flagellar basal body rod protein FlgB [Brucella suis bv. 3 str.
686]
gi|254706295|ref|ZP_05168123.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
M163/99/10]
gi|254711411|ref|ZP_05173222.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
B2/94]
gi|254712010|ref|ZP_05173821.1| flagellar basal body rod protein FlgB [Brucella ceti M644/93/1]
gi|254715079|ref|ZP_05176890.1| flagellar basal body rod protein FlgB [Brucella ceti M13/05/1]
gi|256014939|ref|YP_003104948.1| flagellar basal body rod protein [Brucella microti CCM 4915]
gi|256029959|ref|ZP_05443573.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
M292/94/1]
gi|256043070|ref|ZP_05446014.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. Rev.1]
gi|256059611|ref|ZP_05449809.1| flagellar basal body rod protein FlgB [Brucella neotomae 5K33]
gi|256111946|ref|ZP_05452897.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 3
str. Ether]
gi|256158121|ref|ZP_05456039.1| flagellar basal body rod protein FlgB [Brucella ceti M490/95/1]
gi|256252925|ref|ZP_05458461.1| flagellar basal body rod protein FlgB [Brucella ceti B1/94]
gi|256262868|ref|ZP_05465400.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
str. 63/9]
gi|260564300|ref|ZP_05834785.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. 16M]
gi|261216789|ref|ZP_05931070.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
gi|261220016|ref|ZP_05934297.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
gi|261313739|ref|ZP_05952936.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M163/99/10]
gi|261319019|ref|ZP_05958216.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
B2/94]
gi|261319656|ref|ZP_05958853.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
gi|261323580|ref|ZP_05962777.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
gi|261753153|ref|ZP_05996862.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
686]
gi|265986978|ref|ZP_06099535.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M292/94/1]
gi|265989508|ref|ZP_06102065.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
str. Rev.1]
gi|265993393|ref|ZP_06105950.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
str. Ether]
gi|265996638|ref|ZP_06109195.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
gi|294853172|ref|ZP_06793844.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
gi|17985311|gb|AAL54331.1| flagellar basal-body rod protein flgb [Brucella melitensis bv. 1
str. 16M]
gi|23463490|gb|AAN33358.1| flagellar basal-body rod protein FlgB [Brucella suis 1330]
gi|161337044|gb|ABX63348.1| flagellar basal-body rod protein FlgB [Brucella canis ATCC 23365]
gi|225616468|gb|EEH13516.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
gi|225642114|gb|ACO02027.1| flagellar basal-body rod protein FlgB [Brucella melitensis ATCC
23457]
gi|255997599|gb|ACU49286.1| flagellar basal body rod protein [Brucella microti CCM 4915]
gi|260151943|gb|EEW87036.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. 16M]
gi|260918600|gb|EEX85253.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
gi|260921878|gb|EEX88446.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
gi|261292346|gb|EEX95842.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
gi|261298242|gb|EEY01739.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
B2/94]
gi|261299560|gb|EEY03057.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
gi|261302765|gb|EEY06262.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M163/99/10]
gi|261742906|gb|EEY30832.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
686]
gi|262550935|gb|EEZ07096.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
gi|262764263|gb|EEZ10295.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
str. Ether]
gi|263000177|gb|EEZ12867.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
str. Rev.1]
gi|263092703|gb|EEZ16912.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
str. 63/9]
gi|264659175|gb|EEZ29436.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M292/94/1]
gi|294818827|gb|EFG35827.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
gi|326410332|gb|ADZ67396.1| flagellar basal body rod protein FlgB [Brucella melitensis M28]
gi|326553624|gb|ADZ88263.1| flagellar basal body rod protein FlgB [Brucella melitensis M5-90]
Length = 126
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGI---AATRLRPDDVTEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|114706768|ref|ZP_01439668.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
gi|114537716|gb|EAU40840.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
Length = 126
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--H 58
M + F + S+ A+WLS RQ +V+EN+AN +TP Y AKDI+ FE +L+ N +A+T +
Sbjct: 1 MDQVYLFSLTSKQADWLSHRQALVAENVANVNTPGYTAKDITPFEQVLD-NTALAQTASN 59
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL G EA T V+ SGN+V + E+ K+G + Y LNT ++K
Sbjct: 60 PKHL-----VGFGGGTAEAEATEAVTWDVKHSGNSVAVEQEMMKAGEVSRDYSLNTSIVK 114
Query: 119 KLNSMVMHVVRG 130
+ M M +RG
Sbjct: 115 SFHRMFMTTIRG 126
>gi|319781684|ref|YP_004141160.1| flagellar basal body rod protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167572|gb|ADV11110.1| flagellar basal body rod protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 126
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M+P++ F +A++ A WL+ RQ V+ NIANA+TP Y A D+ FE +L++ + + T
Sbjct: 1 MEPVSLFDLAAKQAQWLAVRQSAVAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + NA P + V S N+V + ++L K+G ++ +ELNT ++K
Sbjct: 61 GHLGNAAT-----NAGFTIKPQEDDGVVMPSKNSVVLEDQLLKAGEVRRSFELNTAIVKA 115
Query: 120 LNSMVMHVVR 129
+SM+M V+
Sbjct: 116 FHSMMMMAVK 125
>gi|254699458|ref|ZP_05161286.1| flagellar basal body rod protein FlgB [Brucella suis bv. 5 str.
513]
gi|261749909|ref|ZP_05993618.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
513]
gi|261739662|gb|EEY27588.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
513]
Length = 126
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ + +QT SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGIAATRLRSDDVTEQTH----SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|319405398|emb|CBI79017.1| Flagellar basal-body rod protein flgB [Bartonella sp. AR 15-3]
Length = 128
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + FF++A++ ANWLS RQK ++ N+ANA+TP Y+A+D+ F IL N+ MA T+
Sbjct: 1 MDSVNFFEMANKQANWLSVRQKAIASNVANANTPGYKARDVEDFTAILQNKTISMAVTNI 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ HVI + V SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDITENG---METHVIRP--ESIMEVTHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMATVRG 126
>gi|260466622|ref|ZP_05812810.1| flagellar basal body rod protein [Mesorhizobium opportunistum
WSM2075]
gi|259029628|gb|EEW30916.1| flagellar basal body rod protein [Mesorhizobium opportunistum
WSM2075]
Length = 126
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M+P++ F +A++ A WL+ RQ ++ NIANA+TP Y A D+ FE +L++ + + T
Sbjct: 1 MEPVSLFDLAAKQAQWLAVRQSAIAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + NA P + V S N+V + ++L K+G ++ +ELNT ++K
Sbjct: 61 GHLGSAAT-----NAGFAIKPQEDDGVVMPSKNSVVLEDQLLKAGEVRRSFELNTAIVKA 115
Query: 120 LNSMVMHVVR 129
+SM+M V+
Sbjct: 116 FHSMMMMAVK 125
>gi|319403958|emb|CBI77546.1| Flagellar basal-body rod protein flgB [Bartonella rochalimae ATCC
BAA-1498]
Length = 128
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + FF++A++ ANWLS RQK ++ N+ANA+TP Y+A+D+ F +L N+ MA T+
Sbjct: 1 MDSVNFFEMANKQANWLSVRQKAIASNVANANTPGYKARDVEDFTAVLQNKTISMAVTNV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ H+I + V SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDITENG---METHIIRP--ENVMEVTHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMATVRG 126
>gi|319409190|emb|CBI82834.1| Flagellar basal-body rod protein flgB [Bartonella schoenbuchensis
R1]
Length = 128
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + F IA++ A+WL+ RQK ++ N+ANA+TP Y+A+D+ F T+L NQ MA T+
Sbjct: 1 MDSVNLFDIANKQADWLTVRQKAIASNVANANTPGYKARDVQDFPTVLQNQTISMAVTNV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +D +G+ A E ++ T SGN V + E+ K G + LNT ++K
Sbjct: 61 RHIDLTD-NGMEAQAIRSENIMEITH----SGNNVDLEEEMRKGGEVNREMSLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M+M V+G
Sbjct: 116 FHRMMMVTVKG 126
>gi|148557912|ref|YP_001257210.1| flagellar basal body rod protein FlgB [Brucella ovis ATCC 25840]
gi|148369197|gb|ABQ62069.1| flagellar basal-body rod protein FlgB [Brucella ovis ATCC 25840]
Length = 126
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+L E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LYL-EAEADGI---AATRLRPDDVTEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|319406973|emb|CBI80610.1| Flagellar basal-body rod protein flgB [Bartonella sp. 1-1C]
Length = 128
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + FF++A++ ANWLS RQK ++ N+ANA+TP Y+A+D+ F +L N+ MA T+
Sbjct: 1 MDSVNFFEMANKQANWLSVRQKAIASNVANANTPGYKARDVEDFTAVLQNKMISMAVTNI 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ H+I + V SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDITENG---METHIIRP--ENVMEVTHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMATVRG 126
>gi|260568519|ref|ZP_05838988.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40]
gi|260155184|gb|EEW90265.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40]
Length = 126
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
L E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LRL-EAEADGI---AATRLRPDDVTEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|163844343|ref|YP_001621998.1| flagellar basal body rod protein FlgB [Brucella suis ATCC 23445]
gi|163675066|gb|ABY39176.1| flagellar basal-body rod protein FlgB [Brucella suis ATCC 23445]
Length = 126
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ L M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E+++ G+ A P D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHL-EAEADGI---AATRLRPDDVTEQTH-SGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVR 129
+ M++ V +
Sbjct: 116 FHRMMLSVAK 125
>gi|90422607|ref|YP_530977.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisB18]
gi|90104621|gb|ABD86658.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisB18]
Length = 125
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M PI F +AS A WLS RQ +S N+ANA+TP Y+AKDI SF +L+ + +A T
Sbjct: 1 MGPIYLFDVASSQAQWLSLRQATISSNVANANTPGYQAKDIESFSKLLDGKLIPVAVTSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +SG N E + + SGN+V + E+ K+G + Y LNT ++K
Sbjct: 61 MHI----ASGTAANPG--ETREKDSWDIVHSGNSVSLEQEMLKAGDVNRDYSLNTAIVKS 114
Query: 120 LNSMVMHVVRG 130
M M +G
Sbjct: 115 FQRMFMSSTKG 125
>gi|90418394|ref|ZP_01226306.1| putative flagellar basal-body rod protein FlgB [Aurantimonas
manganoxydans SI85-9A1]
gi|90338066|gb|EAS51717.1| putative flagellar basal-body rod protein FlgB [Aurantimonas
manganoxydans SI85-9A1]
Length = 126
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M + F +ASQ +L++RQ +V+EN+AN TP Y +KD+SSF L+ L M+R+
Sbjct: 1 MDSLYIFGLASQRTAYLAQRQTVVAENVANVDTPGYTSKDLSSFTEALDATALRMSRSQA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL DS+G + V E P V+ SGN+V + E+ K+G + Y L T ++K
Sbjct: 61 MHLASLDSAGGGSDV-VNEMPWS----VKHSGNSVSLPQEMLKAGEVSREYALGTSVVKS 115
Query: 120 LNSMVMHVVRG 130
+ M++ +G
Sbjct: 116 FHRMLIMSAKG 126
>gi|319898634|ref|YP_004158727.1| flagellar basal-body rod protein flgB [Bartonella clarridgeiae 73]
gi|319402598|emb|CBI76143.1| Flagellar basal-body rod protein flgB [Bartonella clarridgeiae 73]
Length = 128
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + F++A++ A+WLS RQK ++ N+ANA+TP Y+A+D+ F +L N+ MA T+
Sbjct: 1 MDSVNLFEMANKQADWLSVRQKAIASNVANANTPGYKARDVDDFTAVLQNKTISMAVTNV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ AHV+ + T + SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDMTENG---MEAHVMRP--ENITEITHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M + V+G
Sbjct: 116 FHRMTIAAVKG 126
>gi|110632659|ref|YP_672867.1| flagellar basal body rod protein FlgB [Mesorhizobium sp. BNC1]
gi|110283643|gb|ABG61702.1| flagellar basal-body rod protein flgB [Chelativorans sp. BNC1]
Length = 135
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-QNFLMARTHE 59
M+P+ F +A+Q A WLS RQ V+ NIAN +TP+Y+A D+ FE +L+ M TH
Sbjct: 11 MEPVNLFDLATQQARWLSVRQAAVAGNIANINTPSYKALDVEPFEKVLDGTRVAMQATHA 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKLI 117
H H LD++ ++ S N+V + +EL K+G ++ +ELNT ++
Sbjct: 71 QH--------QHTGVTPASFSLDESENPKMLPSENSVVLEDELVKAGEVRRAFELNTAIV 122
Query: 118 KKLNSMVMHVVRG 130
K + M++ +G
Sbjct: 123 KAFHRMILMTAKG 135
>gi|158422261|ref|YP_001523553.1| flagellar basal body rod protein FlgB [Azorhizobium caulinodans ORS
571]
gi|158329150|dbj|BAF86635.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
Length = 169
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 30/142 (21%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
+ P+ F +AS+ A W S RQ ++ NIANA+TP Y+A+++ F ++N+ L MA T
Sbjct: 43 LDPLYLFDLASRQARWASVRQATITGNIANANTPGYQAREVEPFSAVMNKTRLSMATTEP 102
Query: 60 THL------------KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
H+ KESDS W V SGN+V + E+ K+ +
Sbjct: 103 GHMGVPFAGAETSKTKESDS----WE-------------VTASGNSVNLDQEMLKAADVN 145
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
Y LNT +++ N M++ VR
Sbjct: 146 RTYTLNTNIVRAFNRMILTSVR 167
>gi|115523176|ref|YP_780087.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisA53]
gi|115517123|gb|ABJ05107.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisA53]
Length = 134
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHETH 61
P+ F +AS HA WLS RQ +S N+ANA+TP YRA+DI F IL+ + +A T+ H
Sbjct: 10 PVYLFDVASSHAQWLSLRQASISSNVANANTPGYRAQDIEPFAKILDAKVVPVAVTNPRH 69
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + E D V SGN+V + E+ K+G I Y LNT ++K +
Sbjct: 70 ITTGSITSERAQGMRKEDSWD----VVHSGNSVSLEQEMLKAGDINRDYSLNTAIVKSFH 125
Query: 122 SMVM 125
M M
Sbjct: 126 RMFM 129
>gi|170748110|ref|YP_001754370.1| flagellar basal body rod protein FlgB [Methylobacterium
radiotolerans JCM 2831]
gi|170654632|gb|ACB23687.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
Length = 128
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M PI F +AS+ L+ RQ ++S NIANA+TP YRA+D++ F +L++ L MA T
Sbjct: 1 MSPIFLFNLASRQLQHLTARQAVISGNIANANTPGYRARDLTPFRDVLDKTVLTMAATRP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL E D G A A V SGN+V I +L KSG + LN ++K
Sbjct: 61 GHL-ELDEPG----ARPARASASGGWDVVHSGNSVSIEEQLMKSGEVSRDQALNGSVVKA 115
Query: 120 LNSMV 124
N M+
Sbjct: 116 FNRML 120
>gi|217976222|ref|YP_002360369.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
gi|217501598|gb|ACK49007.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
Length = 126
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 22/139 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
M I F ++SQ A WL+ RQ +++ N+ANA+TP + A D++ FE + N + +A T
Sbjct: 1 MGSIHLFDLSSQQARWLTVRQSVIAANVANANTPGFTASDVTPFEDVFNDASIRLAATDP 60
Query: 60 THL--------KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
H+ + S G W +TT SGN+V + NE+ K+G + +
Sbjct: 61 GHIGIDPLASDQVSVKDGAAW----------ETTH---SGNSVSLENEMMKAGEVNRSFS 107
Query: 112 LNTKLIKKLNSMVMHVVRG 130
LN+ ++K N M+M V+G
Sbjct: 108 LNSSIVKSFNQMLMASVKG 126
>gi|114765224|ref|ZP_01444356.1| Flagellar basal-body rod protein FlgB [Pelagibaca bermudensis
HTCC2601]
gi|114542359|gb|EAU45387.1| Flagellar basal-body rod protein FlgB [Roseovarius sp. HTCC2601]
Length = 133
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
++FFQ+ASQ WL RQ ++SEN+ANA TP+Y+AK +S F+ +L M T +
Sbjct: 6 MSFFQLASQRMTWLGARQAVISENVANADTPDYKAKKVSGFDAMLENADAMQGLKVTDTR 65
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SSG N + A D G + GNTV + + + + Y L +L ++ +S+
Sbjct: 66 HITSSGETPNGVRVTADEDAWEG-SIDGNTVALEQQTIDAAEVAGSYRLAAELYRRGHSL 124
Query: 124 VMHVVRG 130
+ V G
Sbjct: 125 LTIAVTG 131
>gi|296447441|ref|ZP_06889366.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
OB3b]
gi|296255061|gb|EFH02163.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
OB3b]
Length = 127
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 80/132 (60%), Gaps = 8/132 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
++P+ F + + ++LS RQ +V++N+ANA++P YRA D++ F +L+Q+ L M+ T+
Sbjct: 2 VEPVYLFDLVERQRSYLSARQALVAQNVANANSPGYRAVDLAPFTKVLDQSGLQMSETNS 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTT-GVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H++ S+ A +P ++T VSGN+V + E+ K+G I+ + ++T ++K
Sbjct: 62 LHVQ---SAAFDPQA---ASPKERTAWETTVSGNSVSLEQEMIKAGEIRGAFSIDTSILK 115
Query: 119 KLNSMVMHVVRG 130
+ M M ++G
Sbjct: 116 AFHGMWMATLKG 127
>gi|163850060|ref|YP_001638103.1| flagellar basal body rod protein FlgB [Methylobacterium extorquens
PA1]
gi|218528663|ref|YP_002419479.1| flagellar basal body rod protein FlgB [Methylobacterium
chloromethanicum CM4]
gi|240137194|ref|YP_002961663.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
AM1]
gi|254559206|ref|YP_003066301.1| flagellar basal-body rod protein flgB [Methylobacterium extorquens
DM4]
gi|163661665|gb|ABY29032.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
gi|218520966|gb|ACK81551.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
CM4]
gi|240007160|gb|ACS38386.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
AM1]
gi|254266484|emb|CAX22248.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
DM4]
Length = 129
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHETHL 62
+ F +ASQHA +L+ RQ ++ N+ANA+TP Y+A+D+ F +L + L MA T +HL
Sbjct: 5 VYLFDLASQHARFLATRQATIAGNVANANTPGYKARDVMPFAQVLARTGLDMASTATSHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ +G+ V EA +T V S + V + E+ K+G + + L+T ++K +
Sbjct: 65 G-TQGTGI----PVREAKPTETWEVLQSSSAVSLEQEMLKAGDVSRQHNLDTAVVKSFHR 119
Query: 123 MVMHVVRG 130
M+M V+G
Sbjct: 120 MLMAAVKG 127
>gi|323139651|ref|ZP_08074693.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC
49242]
gi|322395083|gb|EFX97642.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC
49242]
Length = 126
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M+P+ F + +WLS RQ +V++NIAN+ TP YRA+D+ F ++ + L MA ++
Sbjct: 1 MEPVHLFNLIDHQRSWLSTRQSLVAQNIANSDTPGYRARDVMPFARVMESSALEMAGSNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ S S A T G + SGN+V E+ K+G I+ Y L+T ++
Sbjct: 61 LHMHPSQSEAY-------AAATKPTDGWETTHSGNSVSPELEMIKAGEIRGAYTLDTNIL 113
Query: 118 KKLNSMVMHVVR 129
+ ++M + VR
Sbjct: 114 RSFHNMWLSAVR 125
>gi|89068701|ref|ZP_01156087.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
gi|89045664|gb|EAR51726.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
Length = 131
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ ++FF+IASQ WL RQ++VSENIANA TP YRA+D+S FE+++ ++ + +
Sbjct: 3 LEAMSFFRIASQRMQWLGTRQQVVSENIANADTPGYRARDVSPFESMVTRSDAGSGPAVS 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ SG V E + T V + GNTV + + K+ I Y L +L +K
Sbjct: 63 NPAHITGSGRGAAVDVRED--EGTWNVSLDGNTVVLEEQSIKASEISENYRLAAQLYRK 119
>gi|118589984|ref|ZP_01547388.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
gi|118437481|gb|EAV44118.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
Length = 126
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M+P+ ++ S +WLS RQ ++ENIANA+TP +R+KD+ F T++++ L M TH+
Sbjct: 1 MEPVFLTKLVSNSNDWLSVRQATIAENIANANTPGFRSKDLEPFTTVISRTQLAMTATHD 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL ++ + A + + V SGN+V + EL K+G + + LN + K
Sbjct: 61 GHLGQTMEA-----ARKSDVEKADSWTVTHSGNSVSLEQELMKAGEVARDHSLNASIAKS 115
Query: 120 LNSMVMHVVR 129
+ M + V+
Sbjct: 116 FHRMYLSAVK 125
>gi|182680551|ref|YP_001834697.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636434|gb|ACB97208.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 126
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M P+T + SQ A WL+ RQ +++NIA A+TP +++ D+ FE + +++ L M T
Sbjct: 1 MGPVTVLDLVSQQARWLTLRQATIAQNIAQANTPGFKSVDLLPFEQVYSESGLRMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D + A EA + T SGN+V + EL K+G I Y LNT + +
Sbjct: 61 KHLA-ADPNEADLTAGHTEAGWETTH----SGNSVSLEQELMKTGEIHGAYTLNTNIARS 115
Query: 120 LNSMVMHVVRG 130
M++ V+
Sbjct: 116 FQQMLLTAVKA 126
>gi|288962706|ref|YP_003453000.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288914972|dbj|BAI76456.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 130
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 9/122 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTH 58
+ I FFQ+A ++L++RQK+++EN+ NA+TP+Y+A+D+ SF+++++ + ART
Sbjct: 3 LSKIGFFQLAGTRLDYLAQRQKLIAENVVNANTPDYQARDLKSFDSLMDGIRPVEAARTS 62
Query: 59 ETHLKESDS-SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL S S +G +A L ++T SGN V + E+ K G + + L T L
Sbjct: 63 GLHLASSRSTAGFREEG---KAALWEST---PSGNAVSLEQEMIKGGETRDAFALTTSLF 116
Query: 118 KK 119
++
Sbjct: 117 QR 118
>gi|188579864|ref|YP_001923309.1| flagellar basal body rod protein FlgB [Methylobacterium populi
BJ001]
gi|179343362|gb|ACB78774.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
Length = 129
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHETHL 62
+ F +ASQHA +L+ RQ ++ N+ANA+TP Y+A+D+ F +L + L M+ T THL
Sbjct: 5 VYLFDLASQHARYLATRQATIAGNVANANTPGYKARDVVPFAQVLARTGLDMSSTANTHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ V E +T V S + V + E+ K+G + + L+T ++K +
Sbjct: 65 ATEGN-----RIPVRETKAAETWEVLQSSSAVSLEQEMLKAGDVSRQHNLDTAVVKSFHR 119
Query: 123 MVMHVVR 129
M+M V+
Sbjct: 120 MLMAAVK 126
>gi|170741833|ref|YP_001770488.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
gi|168196107|gb|ACA18054.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
Length = 127
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M I F +AS+ A +LS RQ V+ NIANA TP Y+A+D+ F +L++ L +A T +
Sbjct: 1 MSGIYLFGLASRRAQYLSVRQATVAGNIANADTPGYKARDVVPFAEVLSRAGLDLAATSQ 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ ++ A V P + +Q G++V + E+ KS I + LNT ++K
Sbjct: 61 GHLRAGTTT---PTAKV--KPSESWDAIQ-GGHSVSLEQEMLKSNDIARDFNLNTAVVKA 114
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 115 FHRMMLSGVR 124
>gi|163744318|ref|ZP_02151678.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45]
gi|161381136|gb|EDQ05545.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45]
Length = 119
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETI----LNQNFLMARTHETHLKESDSSGLH 71
WLS RQK+VSEN+AN +TPN++A+D+SSF ++ L+++ + TH+ H +G+
Sbjct: 3 WLSARQKVVSENVANVATPNFKARDVSSFASMLSGELSRDNGLVTTHDKHF-----TGVA 57
Query: 72 WNAHVIEAPLDQTT-GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ D++ G + GNTV + + K+ I Y L +L +K M+ V G
Sbjct: 58 QGTPGVREVTDRSVIGTTLDGNTVNLEEQAVKAAEIDDHYRLAAQLYRKSYDMLTMAVTG 117
>gi|218672512|ref|ZP_03522181.1| flagellar basal body rod protein FlgB [Rhizobium etli GR56]
Length = 80
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ MART+ H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y
Sbjct: 2 DIAMARTNPAHFSGNDLSD-SADIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQY 60
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+LNT L+ N M++ VR
Sbjct: 61 DLNTSLVSSFNRMMLMTVR 79
>gi|304392509|ref|ZP_07374449.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130]
gi|303295139|gb|EFL89499.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130]
Length = 133
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 20/130 (15%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHL 62
F +A QH+NW+ RQK+V+ NIA+A TP +R D++ F ++++ + MA TH H+
Sbjct: 19 LFSLAQQHSNWVEARQKVVAANIAHADTPGFRGSDVAPFASLMSADAKPVGMATTHAGHM 78
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT--NELYKSGHIKYLYELNTKLIKKL 120
S D GV V+ ++ GI+ +E+ + ++ + LNT ++K
Sbjct: 79 VADGS--------------DAKIGV-VARDSTGISLESEMAEISAVRREHGLNTAIVKSF 123
Query: 121 NSMVMHVVRG 130
+ + + +RG
Sbjct: 124 HRLYLTSIRG 133
>gi|312115252|ref|YP_004012848.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
17100]
gi|311220381|gb|ADP71749.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
17100]
Length = 124
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
IAS WL +++++++N+ANA+TP Y+A +I FE ++ H+ L+ +
Sbjct: 5 LDIASLQGRWLFAKERVLAQNVANANTPGYKAANIVPFEAVM---------HDIRLQMTS 55
Query: 67 SSGLHWNAHVIE----APLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S +H A V + A D G SG V + E+ KS + Y LN ++K +
Sbjct: 56 TSPMHLRAEVSQISSTAQEDAAGGETFYSGGDVNLDQEMLKSSEVMRDYALNASVVKTFH 115
Query: 122 SMVMHVVRG 130
SM+ +G
Sbjct: 116 SMISQAAKG 124
>gi|218506432|ref|ZP_03504310.1| flagellar basal body rod protein FlgB [Rhizobium etli Brasil 5]
Length = 86
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ M RT+ H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y
Sbjct: 8 DITMTRTNPAHFSGNDFSE-TGDIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQY 66
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+LNT L+ N M++ VR
Sbjct: 67 DLNTSLVSSFNRMMLMTVR 85
>gi|84502400|ref|ZP_01000536.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
HTCC2597]
gi|84389212|gb|EAQ02009.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
HTCC2597]
Length = 133
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
+ ++FF +AS+ NWL RQ+++++N+AN+ TP Y+A+D+S+F +L RT +
Sbjct: 3 LTDMSFFDLASRRMNWLGARQQVIAQNVANSDTPGYKARDVSNFAEVLRGAGGAGVRTTD 62
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ G ++ E + V + GN+V + + K+ I Y L +L +K
Sbjct: 63 SRHIGGVGGGAIDGVNIRED--EGAHEVSLDGNSVALEQQSIKAAEISENYRLAAQLYRK 120
Query: 120 LNSMVMHVVRG 130
+ M+ V G
Sbjct: 121 GHEMLTLAVTG 131
>gi|27381987|ref|NP_773516.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
USDA 110]
gi|27355157|dbj|BAC52141.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
110]
Length = 133
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-QNFLMARTHETH 61
P+ F++AS A +L RQ ++ N+ANA+TP ++A+D+ F +L+ +A T TH
Sbjct: 10 PLYLFELASSQARYLELRQSTIATNVANANTPGFKARDVEPFNKVLDGMPVRLATTSPTH 69
Query: 62 LK----ESDSSGL----HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ E+D+ W+ V SGN+V + E+ K + Y +N
Sbjct: 70 MQLSATETDTRATSKKDSWD-------------VVHSGNSVSLEQEMIKGNDVNRDYSMN 116
Query: 114 TKLIKKLNSMVMHVVR 129
+ +++ + M++ V+
Sbjct: 117 SAVVRSFHRMLLSSVK 132
>gi|83944174|ref|ZP_00956630.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
gi|83955125|ref|ZP_00963781.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
gi|83840454|gb|EAP79627.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
gi|83845041|gb|EAP82922.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
Length = 117
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
P + F +A + WL+ RQ +VSENIAN+ YRA+D+ SF ++L
Sbjct: 5 PTSLFSLAPKRLQWLATRQNVVSENIANSDVAGYRAQDVQSF--------------ASYL 50
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+++ S A V+EA + G +GN V + +L ++ +++ L +K +
Sbjct: 51 EDAGRSQRLQEAEVVEARV--LGGATATGNNVNLEEQLVEANSASGQFQMAASLYRKAHE 108
Query: 123 MVMHVV 128
MV V
Sbjct: 109 MVYAVA 114
>gi|218659923|ref|ZP_03515853.1| flagellar basal body rod protein FlgB [Rhizobium etli IE4771]
Length = 44
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPF 44
>gi|254503630|ref|ZP_05115781.1| hypothetical protein SADFL11_3669 [Labrenzia alexandrii DFL-11]
gi|222439701|gb|EEE46380.1| hypothetical protein SADFL11_3669 [Labrenzia alexandrii DFL-11]
Length = 177
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M+P+ ++ SQ+ WLS RQ ++ENIANA+TP + AKD+ F +++++ L M TH
Sbjct: 52 MEPVFLNKLVSQNNEWLSVRQAAIAENIANANTPGFGAKDVEPFVSVISKTHLAMTATHG 111
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+HL ++ + A + + V SGN+V + EL K+G + + LN + K
Sbjct: 112 SHLGQTMEA-----AKASDMEKADSWNVTHSGNSVSLEQELMKAGEVARDHSLNASIAKS 166
Query: 120 LNSMVMHVVR 129
+ M + VR
Sbjct: 167 FHKMYLAAVR 176
>gi|296534151|ref|ZP_06896647.1| probable flagellar basal-body rod protein FlgB [Roseomonas
cervicalis ATCC 49957]
gi|296265527|gb|EFH11656.1| probable flagellar basal-body rod protein FlgB [Roseomonas
cervicalis ATCC 49957]
Length = 129
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTH 58
+P +A Q NWL +RQK++++NIANA+TP ++ +D+ +FE +L + N +ART
Sbjct: 4 RPSDPLALAGQRLNWLEQRQKVLAQNIANANTPGFQPRDLQAFEQVLERAGANAPLARTD 63
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ + + V E D GN V + + K + L L +
Sbjct: 64 ARHIPARNEMQGRPDRKVSERSPD--------GNAVSLEEQALKVAATDQAHALAVNLHR 115
Query: 119 KLNSM 123
+ +M
Sbjct: 116 RWTAM 120
>gi|296531770|ref|ZP_06894592.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC 49957]
gi|296267909|gb|EFH13714.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC 49957]
Length = 133
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQNFL----MAR 56
I F+I+ L+ERQ ++++NIA+A TP YRA+D+ F+ +L L +A
Sbjct: 5 IDVFRISGARMRHLAERQNVLAQNIAHADTPLYRARDVKPFQFDSALLRGPALPMLHLAA 64
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T HL GL N I A Q+ GN+V + ++ K + Y+L T +
Sbjct: 65 TRPGHL------GLSRNGVTIAADRAQSYSEDPDGNSVNLEEQMVKQADVLKAYDLTTAV 118
Query: 117 IKKLNSMVMHVVRG 130
++ +++ V G
Sbjct: 119 YRRGAALLRTAVGG 132
>gi|288958047|ref|YP_003448388.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288910355|dbj|BAI71844.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 134
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLM--ARTHE 59
+ F++ S+ +WL++RQ+++S+NIANA TP Y+ +D+ SF L+ N + T
Sbjct: 6 LGIFKLMSRKMDWLTQRQEVLSQNIANADTPEYKGRDLKPFSFRDALSDNRRLTPVATSA 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + +G + P + GN V + +++ + Y+ T L KK
Sbjct: 66 GHLAGTRGAGGMAQEQKVRDPYETAP----DGNNVVLEDQMMRMSQSSMDYQTITNLYKK 121
Query: 120 LNSMVMHVVR 129
+M+ +R
Sbjct: 122 QVAMIKSAIR 131
>gi|254292928|ref|YP_003058951.1| flagellar basal-body rod protein FlgB [Hirschia baltica ATCC 49814]
gi|254041459|gb|ACT58254.1| flagellar basal-body rod protein FlgB [Hirschia baltica ATCC 49814]
Length = 149
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 20/138 (14%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAK--DISSFETILNQNFL-------- 53
+ F + + L ERQK++S+N++N STP Y K DISSF L + +
Sbjct: 7 MPIFGMMKARMDMLGERQKVLSQNVSNVSTPGYTPKDVDISSFNAALAKGKVGNNAGAGG 66
Query: 54 ------MARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
MA TH H+ S S G L A++ +AP +TT + GN V + +++ K
Sbjct: 67 PANAGAMAVTHPGHIAASASRGSLVAGAYIEKAPDSETT---LDGNGVVVEDQMMKIAET 123
Query: 107 KYLYELNTKLIKKLNSMV 124
+ +E L K SM+
Sbjct: 124 RMEFETMIGLYNKSLSMM 141
>gi|163794134|ref|ZP_02188107.1| Flagellar basal body protein [alpha proteobacterium BAL199]
gi|159180748|gb|EDP65267.1| Flagellar basal body protein [alpha proteobacterium BAL199]
Length = 132
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETILNQN--FLMARTHE 59
+T F++A Q +WL +RQ ++++NIAN++TPNYR+K++ + F++ L ++ M T++
Sbjct: 1 MTLFKMARQKMSWLGQRQTVLAQNIANSNTPNYRSKELQALDFDSALREHRPVQMQATNK 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + H V L V GN+V + +L K + Y+L + +K
Sbjct: 61 LHLSGTVAPKEHREEKVR---LKDVYEVNPDGNSVIMEEQLMKVSETQMQYQLAAGVYQK 117
>gi|23008565|ref|ZP_00049958.1| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 129
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHETHL 62
+ F +ASQHA +L+ RQ ++ N+ANA+T +Y+A+D+ F +L + L MA T THL
Sbjct: 5 VYLFDLASQHARYLAVRQATIAGNVANANTADYKARDVLPFAQVLARTGLDMASTAGTHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ S V E + V S ++V + E+ K+ + + L+T ++K +
Sbjct: 65 EAQGS-----RIPVRETQPREGWDVLESSSSVSLEQEMLKASDVSRQHNLDTAVVKSFHR 119
Query: 123 MVMHVVR 129
M+M +
Sbjct: 120 MLMAATK 126
>gi|260431753|ref|ZP_05785724.1| flagellar basal body rod protein FlgB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415581|gb|EEX08840.1| flagellar basal body rod protein FlgB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 129
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHET 60
+ F++A A +RQ ++S N+ANA TP YRA+DI FE L M T
Sbjct: 5 LNVFKVAYAMATHAGQRQAVISRNMANADTPGYRARDIEPFEKALENRQSTQTMIATRPG 64
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL + S+G W V E +D +GN V + E+ + +K ++ + K
Sbjct: 65 HLNAAGSNGHLWAEFVREGAVDP------NGNGVSLETEMLNAVEVKRQHDRAVAIYK 116
>gi|90415321|ref|ZP_01223255.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2207]
gi|90332644|gb|EAS47814.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2207]
Length = 128
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLK 63
F I + + ++R +++S+NIANA TP ++A+DI F+ +LN Q + TH H+
Sbjct: 9 FGIHEKALDLRAKRMEVLSQNIANADTPGFKARDI-DFKNVLNNVQQAGSIRTTHAAHVS 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ S+G V P G V GNTV I+ E K G Y+ + I+ +
Sbjct: 68 QASSAGADM---VYTVPF----GTSVDGNTVDISVEHAKYGKAAAEYQATLRFIEGNIAG 120
Query: 124 VMHVVRG 130
V +RG
Sbjct: 121 VRKALRG 127
>gi|209963544|ref|YP_002296459.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
gi|209957010|gb|ACI97646.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
Length = 131
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE------TILNQNFLMART 57
I F +AS+ ++L R ++++EN+ANA++P YRAKD+ F+ + + L
Sbjct: 6 IGLFHLASRRMDYLGARHQVIAENVANANSPGYRAKDLKGFDFQSAMQSAAVRPSLTDPA 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H L+E+ A E D GN V + ++ K+ ++ Y+L L
Sbjct: 66 HLAGLREARDFKEDRQAAAYEMAPD--------GNGVVLEEQMMKAAEVRQAYDLAAGLF 117
Query: 118 KKLNSMVMHVVRG 130
+K M+ G
Sbjct: 118 QKHVGMLRQAFTG 130
>gi|302384100|ref|YP_003819923.1| flagellar basal body rod protein [Brevundimonas subvibrioides ATCC
15264]
gi|302194728|gb|ADL02300.1| flagellar basal body rod protein [Brevundimonas subvibrioides ATCC
15264]
Length = 134
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQ--NFLMARTHETHLKESDSSG 69
+WL ERQ++V++N+ANA TP Y A+D+ + F + Q MART+ HL ++G
Sbjct: 17 SWLDERQRVVAQNVANADTPGYVARDLKAPTDFAAAMRQGGGLGMARTNAAHL----TTG 72
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
A D T + GN+V + ++ K + Y+ L +K SM+
Sbjct: 73 APVARFTSSASPDSET--TLDGNSVVVEEQMLKMAESRMAYDAAIGLYQKSMSML 125
>gi|83594158|ref|YP_427910.1| flagellar basal-body rod protein FlgB [Rhodospirillum rubrum ATCC
11170]
gi|83577072|gb|ABC23623.1| Flagellar basal-body rod protein FlgB [Rhodospirillum rubrum ATCC
11170]
Length = 152
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F++A +W ++RQK++SENIANA TPNYR+ D+ S +N M+ + +
Sbjct: 23 LAIFKMAKMRLDWSAQRQKVLSENIANADTPNYRSHDLKSLNF---KNLAMSEASKVAMV 79
Query: 64 ESDSSGLHWNAHVIE-APLDQTT-----GVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+D+ H + E P + T GN V + ++ K Y L+ +L+
Sbjct: 80 RTDAG--HLAPGIPEPGPYREVTERFPYESAADGNEVVLEEQMSALSDTKNQYNLSIELV 137
Query: 118 KKLNSMVMHVVRG 130
KK +M+ R
Sbjct: 138 KKHLNMIKIATRA 150
>gi|254464199|ref|ZP_05077610.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
Y4I]
gi|206685107|gb|EDZ45589.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
Y4I]
Length = 129
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHET 60
+ F+IA A +RQ +V++NIANA TP Y AKDI F + + M+ T +
Sbjct: 5 LNVFKIAYSMATHAGKRQALVAQNIANADTPGYHAKDIKPFTEVFAAGARQSSMSATRGS 64
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
HL + S + W A + TG +GN+V + EL K
Sbjct: 65 HLNGTAGSQMDW------AVISDETGSDPNGNSVSVEAELLK 100
>gi|312876493|ref|ZP_07736476.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796704|gb|EFR13050.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
lactoaceticus 6A]
Length = 133
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSS 68
+W +R +I+S NIANA TP Y+AKD+ FE L +N + T E H+KES SS
Sbjct: 16 DWAWKRNEIISNNIANADTPGYKAKDL-DFEAFLQKSLNQEENLELVTTDERHIKESSSS 74
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ IE LD + +++ NTV I E+ K
Sbjct: 75 ----QDNSIEV-LDSSLQMRLDQNTVDIEQEMGK 103
>gi|119384842|ref|YP_915898.1| flagellar basal body rod protein FlgB [Paracoccus denitrificans
PD1222]
gi|119374609|gb|ABL70202.1| flagellar basal-body rod protein FlgB [Paracoccus denitrificans
PD1222]
Length = 129
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF-ETILNQNFLMART----H 58
I ++AS ERQK+++ N+ANA TP +R++D++ F ET + R H
Sbjct: 5 IDTLRMASSLTAHAVERQKLIARNVANADTPGFRSRDLAGFAETYRSHGPTGMRASRPGH 64
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
T + D +G +A AP +GNTV + E+++S K ++L+ + K
Sbjct: 65 LTEGRGGDGAGRITDAGGEPAP---------NGNTVSLEEEMFRSAAAKRQFDLSLAVTK 115
Query: 119 KLNSMV 124
S+V
Sbjct: 116 SSLSLV 121
>gi|163785675|ref|ZP_02180209.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879056|gb|EDP73026.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
Length = 125
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S+ A++ ER KI+ NIANA TPNY+ KD+ FE +LN+N + + HL S + L
Sbjct: 12 SETASYFLERTKIIQSNIANADTPNYKPKDL-VFEKVLNENIQLKKDDPRHL--SPDTKL 68
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+++E + N V + +EL K +Y+ +++KK + + + G
Sbjct: 69 EIKKYIVE----DSYYSGYDKNKVDVEHELAKLSESSIMYKTLLEVMKKDLGKLKYAISG 124
>gi|302872574|ref|YP_003841210.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
obsidiansis OB47]
gi|302575433|gb|ADL43224.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
obsidiansis OB47]
Length = 133
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETHLKESDSS 68
+W +R +I+S NIANA TP Y+AKD+ +FE L ++F + T+E H+KES SS
Sbjct: 16 DWAWKRNEIISNNIANADTPGYKAKDL-NFEAFLQRSFNQEESLELVTTNERHIKESSSS 74
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ IE LD + +++ NTV I E+ K
Sbjct: 75 P----DNSIEV-LDSSFQMRLDQNTVDIEQEMGK 103
>gi|163738065|ref|ZP_02145481.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
BS107]
gi|163742539|ref|ZP_02149925.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
2.10]
gi|161384124|gb|EDQ08507.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
2.10]
gi|161388681|gb|EDQ13034.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
BS107]
Length = 138
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHET 60
+ F+IA A +RQ +VS+NIANA TP Y AKDI F+ + Q M +
Sbjct: 14 LNVFKIAYSMATHAGKRQALVSQNIANADTPGYNAKDIKPFKEVYAQGPRAGDMIASRSN 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
HL + +G+ W D NTV I E+ K +K
Sbjct: 74 HLHGASGNGMDWAVTATRGGGDPND------NTVSIETEILKGVEVK 114
>gi|312621565|ref|YP_004023178.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202032|gb|ADQ45359.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
kronotskyensis 2002]
Length = 133
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSS 68
+W ER KI+S NIANA TP Y+AKD+ +FE L ++ + T+E H+KES S+
Sbjct: 16 DWAWERNKIISNNIANADTPGYKAKDL-NFEAFLQRSLDQEESLELVTTNERHIKESSSN 74
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ IE LD + +++ NTV I E+ K
Sbjct: 75 P----DNSIEV-LDSSLQMRLDQNTVDIEQEMGK 103
>gi|144900469|emb|CAM77333.1| flagellar basal-body rod protein FlgB [Magnetospirillum
gryphiswaldense MSR-1]
Length = 132
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETH 61
+T +A +W++ RQ+++SENIANA+TP Y KD+ +F+ +L+Q+ + T+
Sbjct: 5 LTLVNLAQSRMDWIARRQEVLSENIANANTPKYIPKDLKPYNFKDVLDQSVPAVKLRATN 64
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQV--------SGNTVGITNELYKSGHIKYLYELN 113
AHV+ D+ V GN V + ++ K G K Y++
Sbjct: 65 -----------TAHVVPEFRDEQRVVDTKKVFESSPDGNAVVLEEQMAKVGEAKTAYDVA 113
Query: 114 TKLIKKLNSMV 124
L ++ M+
Sbjct: 114 AGLFQRQFKML 124
>gi|308050375|ref|YP_003913941.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
gi|307632565|gb|ADN76867.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
Length = 131
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKES--DSSGL 70
+ER +++S NIANA TPNY+A+D+ FE L Q+F +AR+HE H S GL
Sbjct: 20 AERAEVLSSNIANADTPNYKAQDL-DFEQALAGAKSRQSFALARSHEKHFDASIDPQPGL 78
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ PL TG GNTV + E
Sbjct: 79 KF-----RVPLHPDTG---DGNTVDLQTE 99
>gi|149182500|ref|ZP_01860973.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
gi|148849760|gb|EDL63937.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
Length = 129
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+ S +QK++S+NIAN TPNY+AK I SF+ LN++ T+ + + SG N
Sbjct: 16 NYSSAKQKVISQNIANVDTPNYKAKSI-SFKDQLNESISTFEAKRTNPRHFEFSGRGANG 74
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ I++ Q +GN V I E+ S I Y L +L K NS+ V+RG
Sbjct: 75 YYIKS---QPFQYNHNGNGVDIDKEMSDLASNQI-YFNALTDRLNGKFNSL-QSVIRG 127
>gi|254477691|ref|ZP_05091077.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11]
gi|214031934|gb|EEB72769.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11]
Length = 129
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHET 60
+ F+IA A +RQ +V++NIANA TP Y AKDI F+ + Q M +
Sbjct: 5 LNVFKIAYSMATHAGKRQALVAQNIANADTPGYNAKDIKPFKEVYEQRARPGDMIASRAN 64
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
HL + ++W A +Q G + N+V + E+ K +K
Sbjct: 65 HLNGGSGADMNW------AVTEQRGGGDPNDNSVSLEAEILKGVEVK 105
>gi|312792644|ref|YP_004025567.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179784|gb|ADQ39954.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 133
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLKESDSS 68
+W +R +I+S NIANA TP Y+ KD+ +FE L +N + T E H+KES SS
Sbjct: 16 DWAWKRNEIISNNIANADTPGYKVKDL-NFEAFLQKSLNQEENLELVTTDERHIKESSSS 74
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ IE LD + +++ NTV I E+ K
Sbjct: 75 ----QDNSIEV-LDSSLQMRLDQNTVDIEQEMGK 103
>gi|312135857|ref|YP_004003195.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
owensensis OL]
gi|311775908|gb|ADQ05395.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
owensensis OL]
Length = 133
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETHLKESDSS 68
+W +R +I+S NIANA TP Y+AKD+ +FE L ++F + T+E H+KES S+
Sbjct: 16 DWAWKRNEIISNNIANADTPGYKAKDL-NFEAFLQRSFNQEESLELVTTNERHIKESSSN 74
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ IE LD + +++ NTV I E+ K
Sbjct: 75 P----DNSIEV-LDSSFQMRLDQNTVDIEQEMGK 103
>gi|206890640|ref|YP_002248112.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742578|gb|ACI21635.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 111
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+I + + + RQKI++ NIANA TPNY+AKDI NF E K ++
Sbjct: 5 IKILEKVMDICTYRQKILASNIANADTPNYKAKDI---------NF-----QEELKKAAE 50
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S + VIEAP TT GNTV I E+ K +Y T+L M+
Sbjct: 51 SHNAEY--KVIEAP---TTMPNRDGNTVNIEVEMTKLAETMLMYNGATQLFSTRIRMLKD 105
Query: 127 VVRG 130
++G
Sbjct: 106 AIKG 109
>gi|229544390|ref|ZP_04433448.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
gi|229324875|gb|EEN90552.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
Length = 129
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
Query: 12 QHA-NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMA-RTHETHLKES-- 65
+HA + S RQK++S NIANA TPNY+A+D+ SF+ +L N + A RT H + S
Sbjct: 12 EHALQYASLRQKVISNNIANADTPNYKAQDV-SFKNVLEDSVNAISATRTDPRHFRFSAG 70
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
DSS E + T +GN+V I E+ + YE +L K S ++
Sbjct: 71 DSSS--------EIVTESGTTYNSNGNSVDIDTEMANLASNQIYYESLIELEKGKLSSLL 122
Query: 126 HVVRG 130
+VVRG
Sbjct: 123 NVVRG 127
>gi|259417088|ref|ZP_05741007.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B]
gi|259345994|gb|EEW57808.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B]
Length = 138
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL----NQNFLMARTHE 59
+ F IA A +RQ +VSENIANA TP Y AKDI F+ + Q ++A +
Sbjct: 14 LNVFNIAYSMATHAGKRQALVSENIANADTPGYLAKDIKPFKEVFAAGEAQGDMIA-SRS 72
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+H+ ++ SG W A + V +GN+V + ++
Sbjct: 73 SHINGANGSGFDW------AVTTDDSAVDPNGNSVSLEEQI 107
>gi|58039962|ref|YP_191926.1| flagellar basal-body rod protein FlgB [Gluconobacter oxydans 621H]
gi|58002376|gb|AAW61270.1| Flagellar basal-body rod protein FlgB [Gluconobacter oxydans 621H]
Length = 130
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHETHLKE 64
F + NWL RQ++++ NIAN+ TP+Y+AKD+S FE +++ + T H+
Sbjct: 14 LFSLGRDRMNWLQARQQVLAGNIANSDTPDYQAKDVSPFEAAMSEFDITPTVTQPGHIGY 73
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ S H IE +Q+ + GN V + ++ + + L + K SM
Sbjct: 74 NASG-----THTIETTSEQS----LDGNQVSLDQQMEQVADVNDQQHLAVNVYSKYLSM 123
>gi|77464909|ref|YP_354413.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
2.4.1]
gi|77389327|gb|ABA80512.1| hypothetical protein RSP_1331 [Rhodobacter sphaeroides 2.4.1]
Length = 127
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ Q ++HA R ++V+ N+ANA TP YRA+D+ FE+ + + T HL+
Sbjct: 8 VRMAQSMARHAGL---RTEVVAHNLANADTPGYRAQDLPDFESYASGTVGLRTTRPGHLR 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+++S P++ +GNTV + +E+ ++ + +EL
Sbjct: 65 SAEASATD------PVPVEGPGAASPNGNTVSLEDEMVRAVAARQQHEL 107
>gi|294679036|ref|YP_003579651.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
1003]
gi|294477856|gb|ADE87244.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
1003]
Length = 128
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--MARTHETH 61
+ FQ++ A + R+ +V+ N+ANA TP YRAKD+ SF M T H
Sbjct: 5 LEVFQMSQAMARHAALREGVVATNVANADTPGYRAKDVVSFADSYRTEHAQPMRATRPGH 64
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KL 120
L + S + VIE P ++ GN V I +E+ K+ +K ++ + K L
Sbjct: 65 LGANGS----YTVSVIEDPAPDSS--SPDGNGVSIEDEMVKAVDVKRQHDRALAIYKSSL 118
Query: 121 NSMVMHVVRG 130
N + + RG
Sbjct: 119 NVLRASLGRG 128
>gi|83309713|ref|YP_419977.1| flagellar basal body protein [Magnetospirillum magneticum AMB-1]
gi|82944554|dbj|BAE49418.1| Flagellar basal body protein [Magnetospirillum magneticum AMB-1]
Length = 133
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F++A +W+++RQ++++ NIANA+TP Y KDI L+ ++A T + +
Sbjct: 5 LGIFKMAKAQMDWIAQRQEVLASNIANANTPRYLPKDIKP----LDFKEVLAGTAQPDVG 60
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQV-----SGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ ++ H V +P T + GN V + ++ K G Y L +
Sbjct: 61 ATTTNAKHIVPEVTPSPFKAVTQRRTFESTPDGNAVILEEQIAKVGDANSKYNAAAALFQ 120
Query: 119 KLNSMV 124
K M+
Sbjct: 121 KYQKMI 126
>gi|197104390|ref|YP_002129767.1| probable flagellar basal-body rod protein [Phenylobacterium
zucineum HLK1]
gi|196477810|gb|ACG77338.1| probable flagellar basal-body rod protein [Phenylobacterium
zucineum HLK1]
Length = 139
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETH 61
I FQ+ + L+ERQK++++N+ANA TP Y +D+ F T L + MA T H
Sbjct: 9 IPLFQMLRGRLSHLTERQKVIAQNVANADTPGYVPQDVGPFGFRTRLQVSAAMAATQPGH 68
Query: 62 LKESDSSGLHWNAH-VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
++ ++ A+ E +TT ++GN V + E+ K + Y+
Sbjct: 69 MQPKNARSPSAAAYKARETASSETT---LNGNAVVLEEEMMKMAEARINYD 116
>gi|222530142|ref|YP_002574024.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor bescii
DSM 6725]
gi|222456989|gb|ACM61251.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor bescii
DSM 6725]
Length = 133
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQ--NFLMARTHETHLKESDSSG 69
+W ER KI+S NIANA TP Y+AKD+ + + LNQ + + T+E H+KES S+
Sbjct: 16 DWAWERNKIISNNIANADTPGYKAKDLNFRAFLQRSLNQEESLELVTTNERHIKESSSNP 75
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ +E LD + +++ NTV I E+ K
Sbjct: 76 ----DNSLEV-LDSSLQMRLDQNTVDIEQEMGK 103
>gi|23016628|ref|ZP_00056382.1| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 157
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F++A +W+++RQ++++ NIANA+TP Y KD+ L+ ++A T E +
Sbjct: 29 LGIFKMAKAQMDWIAQRQEVLAGNIANANTPRYLPKDLKD----LDFKQVLAGTTEPEVG 84
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQV-----SGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ ++ H V +P T + GN V + ++ K G Y L +
Sbjct: 85 AATTNAKHIVPEVTPSPFKAVTQRRTYESTPDGNAVILEEQMAKLGDANSKYNAAAALFQ 144
Query: 119 KLNSMV 124
K M+
Sbjct: 145 KYQKMI 150
>gi|126463751|ref|YP_001044865.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
17029]
gi|332559807|ref|ZP_08414129.1| FlgB2 [Rhodobacter sphaeroides WS8N]
gi|126105415|gb|ABN78093.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
17029]
gi|332277519|gb|EGJ22834.1| FlgB2 [Rhodobacter sphaeroides WS8N]
Length = 127
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ Q ++HA R ++V+ N+ANA TP YRA+D+ FE+ + + T HL+
Sbjct: 8 VRMAQSMARHAGL---RTEVVAHNLANADTPGYRAQDLPEFESYASGTVGLRTTRPGHLR 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK-------YLYELNTKL 116
+++S P++ +GNTV + +E+ ++ + +Y+ +++L
Sbjct: 65 SAEASAAD------PVPVEGPGAASPNGNTVSLEDEMVRAVAARQQHEMALAIYQSSSRL 118
Query: 117 IK 118
I+
Sbjct: 119 IR 120
>gi|254420343|ref|ZP_05034067.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
gi|196186520|gb|EDX81496.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
Length = 135
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQ--NFLMARTHETHLKESDSSG 69
WL ERQ++++EN+ANA TP Y +D+ + F L + RT+ H+ S+
Sbjct: 17 GWLDERQRVIAENVANADTPGYGGRDLKQPTDFAAALRSGGGLQVVRTNRAHIAPPVSAP 76
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
++P +TT + GN+V + ++ K + Y+ +K SM+ R
Sbjct: 77 RF---DPTKSPDSETT---LDGNSVVVEEQMLKMAESRMAYDAAIGFYQKSMSMLRMAAR 130
>gi|294635607|ref|ZP_06714084.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC
23685]
gi|291091059|gb|EFE23620.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC
23685]
Length = 137
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + + S
Sbjct: 9 FRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSRILEQGRPDGSSMALSL 67
Query: 67 SSGLHWNAHVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYELNTKLIKK 119
+S H A ++ P LD V + GNTV + E + ++Y +L T L +
Sbjct: 68 TSARHIPAQTVQPPTLDLLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDL-TVLTGQ 126
Query: 120 LNSMVMHVVRG 130
+ SM+ + +G
Sbjct: 127 IKSMMSVLQQG 137
>gi|146296277|ref|YP_001180048.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409853|gb|ABP66857.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 137
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFL-M 54
I F++ A +A W +R +++S NIANA TP Y+AKD+ +F+ L +QN L +
Sbjct: 5 FDKIDFYKKALDYA-W--KRNEVISNNIANADTPGYKAKDL-NFKAFLQAYLNDQNNLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
T + H+K SSG IE LD + +++ NTV I E+ K
Sbjct: 61 ITTDKRHIKAEQSSGTSTKDSAIEI-LDSSFQMRLDENTVDIEQEMGK 107
>gi|86139478|ref|ZP_01058047.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
gi|85823981|gb|EAQ44187.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
Length = 137
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHET 60
+ F+IA A+ +RQ +VSENIANA TP Y AKDI F+ + M + +
Sbjct: 14 LNVFKIAYSMASHAGKRQALVSENIANADTPGYHAKDIKPFKEVYAAGPRPGDMVASRGS 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
HL + S + W A G + N+V I E+ +K
Sbjct: 74 HLNGINGSNMDW------AVTTSAVGTDPNDNSVSIETEILNGVEVK 114
>gi|99082805|ref|YP_614959.1| flagellar basal body rod protein FlgB [Ruegeria sp. TM1040]
gi|99039085|gb|ABF65697.1| Flagellar basal-body rod protein flgB [Ruegeria sp. TM1040]
Length = 129
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL----NQNFLMAR 56
+ + F IA A +RQ +VSENIANA TP Y AKDI F + Q ++A
Sbjct: 2 FERLNVFNIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFREVFAASEAQGDMIA- 60
Query: 57 THETHLKESDSSGLHWNAHVIEAPLD 82
+ +H+ + SG W E+ +D
Sbjct: 61 SRGSHINGVNGSGFDWAVTTDESSVD 86
>gi|221640830|ref|YP_002527092.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
KD131]
gi|221161611|gb|ACM02591.1| Flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides
KD131]
Length = 127
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ Q ++HA R ++V+ N+ANA TP YRA+D+ FE+ + + T HL+
Sbjct: 8 VRMAQSMARHAGL---RTEVVAHNLANADTPGYRAQDLPDFESYASGTVGLRTTRPGHLR 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK-------YLYELNTKL 116
++++ P++ +GNTV + +E+ ++ + +Y+ +++L
Sbjct: 65 SAEATAAD------PVPVEGRGAASPNGNTVSLEDEMVRAVAARQQHEMALAIYQSSSRL 118
Query: 117 IK 118
I+
Sbjct: 119 IR 120
>gi|295706288|ref|YP_003599363.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
gi|294803947|gb|ADF41013.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
Length = 129
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETH 61
T FQ ++ S++Q+ +++NIAN TPNY++K + S F +L+ +T H
Sbjct: 6 TTFQTIENGISYASQKQQTIAQNIANVDTPNYKSKTVTRTSEFRDLLHNELEAYQTDSKH 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKL 120
+ SDSS VI + T Q +GN V + E+ + YE L +L K
Sbjct: 66 IPFSDSS-----QRVITQQGN--TSYQANGNNVDMDKEMADMAENQIYYEALVDRLNGKF 118
Query: 121 NSMVMHVVRG 130
NS+ V+RG
Sbjct: 119 NSL-QTVIRG 127
>gi|145298488|ref|YP_001141329.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851260|gb|ABO89581.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 132
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL----NQNFLMARTHETHLK-ESDSSGLHW 72
S+R +++S NIANA TP ++A+DI+ E + Q F MA T E H +SD+ GL
Sbjct: 20 SKRAEVLSSNIANADTPGFKARDINFSEALAQAQHQQGFGMATTSEKHFALQSDAPGLMQ 79
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNE 99
PL TG GNTV + E
Sbjct: 80 ----YRNPLQPDTG---DGNTVDVQQE 99
>gi|291617017|ref|YP_003519759.1| FlgB [Pantoea ananatis LMG 20103]
gi|291152047|gb|ADD76631.1| FlgB [Pantoea ananatis LMG 20103]
gi|327393468|dbj|BAK10890.1| flagellar basal-body rod protein FlgB [Pantoea ananatis AJ13355]
Length = 157
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + L +S H A
Sbjct: 37 NLRAQRQEILASNIANADTPGYQARDI-DFASELNRAMANGRAEGSSLALKVTSARHIEA 95
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
AP DQ + GNTV + E + Y+ + LI +M
Sbjct: 96 QTNSAPSMDLLYRIPDQPS---ADGNTVDMDRERTQFADNSLKYQTDLTLISSQIKGMMS 152
Query: 127 VVRG 130
V++G
Sbjct: 153 VLQG 156
>gi|315498436|ref|YP_004087240.1| flagellar basal-body rod protein flgb [Asticcacaulis excentricus CB
48]
gi|315416448|gb|ADU13089.1| flagellar basal-body rod protein FlgB [Asticcacaulis excentricus CB
48]
Length = 137
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I + WL +RQK+V++N+ANASTP ++ +D+ + + + L + +T L
Sbjct: 6 IGLLGALKEKMTWLGQRQKLVAQNVANASTPGFKPRDLKALDFA---SVLKGQQEQTELG 62
Query: 64 ESDSSGLHWNAH--------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
S ++ H N + +P +TT + GN+V + ++ K + YE
Sbjct: 63 LSVTNAGHMNVEGGNNFAPKAVVSPDSETT---MDGNSVVLEEQMLKMAESRMQYE 115
>gi|312126816|ref|YP_003991690.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
hydrothermalis 108]
gi|311776835|gb|ADQ06321.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
hydrothermalis 108]
Length = 132
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLKESDSS 68
+W +R +I+S NIANA TP Y+AKD+ +FE L + + T+E H+KES S
Sbjct: 16 DWAWKRNEIISNNIANADTPGYKAKDL-NFEAYLQRSLNQEEGLQLFTTNERHIKESSSP 74
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+ IE LD + +++ NTV I E+ K
Sbjct: 75 D-----NSIEV-LDSSLQMRLDQNTVDIEQEMGK 102
>gi|329849688|ref|ZP_08264534.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
C19]
gi|328841599|gb|EGF91169.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
C19]
Length = 137
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISS--FETILN-----QNFLMARTHETHLKESDS 67
W S+RQK+V+EN+ANASTP ++ D+S FE ++ N + T+ H+ + +
Sbjct: 17 GWHSDRQKVVAENVANASTPGFKPHDLSPQDFEKMVRGETPQGNLGLTMTNTQHM--APA 74
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ A V+ +P +TT + GN V + ++ + + ++ +K +M+
Sbjct: 75 TPFSPGAKVVLSPDSETT---MDGNAVVLEEQMLRMAESRMQFQAAVGFYEKSMAMMRMA 131
Query: 128 VR 129
V+
Sbjct: 132 VK 133
>gi|188534173|ref|YP_001907970.1| flagellar basal body rod protein FlgB [Erwinia tasmaniensis Et1/99]
gi|188029215|emb|CAO97087.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
Length = 137
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L++ R T L + +S H A
Sbjct: 17 NLRAQRQEILASNIANADTPGYQARDI-DFASQLSKAVENGRAQGTGLSLAVTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+++P +D + + GNTV + E + Y+ + LI +M V++
Sbjct: 76 ETLQSPSIDLMYRIPAQPALDGNTVDMDRERTEFADNSLKYQTDLTLISSQIKGMMSVLQ 135
Query: 130 G 130
G
Sbjct: 136 G 136
>gi|126734102|ref|ZP_01749849.1| flagellar basal-body rod protein FlgB, putative [Roseobacter sp.
CCS2]
gi|126716968|gb|EBA13832.1| flagellar basal-body rod protein FlgB, putative [Roseobacter sp.
CCS2]
Length = 128
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN--FLMARTHETH 61
+ FQ A A RQ +V+ NIANA TP+++A+ I+ F+ + N +M T +H
Sbjct: 5 LDLFQTAGAMARHAGTRQAVVARNIANADTPDFQAQAIAPFKDVYQDNGGAMMRATRPSH 64
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
+ +D+ N + +A + + +GNTV I +E+ S
Sbjct: 65 ISGADA---QPNIRMQQATVGDPS---PNGNTVSIEDEMLHS 100
>gi|56695105|ref|YP_165452.1| flagellar basal body rod protein FlgB [Ruegeria pomeroyi DSS-3]
gi|56676842|gb|AAV93508.1| flagellar basal-body rod protein; FlgB [Ruegeria pomeroyi DSS-3]
Length = 138
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF-ETILNQ--NFLMARTHET 60
+ F++A A RQ ++++N+ANA TP YR +DI+ F ET + M + +
Sbjct: 14 LNVFKMAYAMATHAGTRQAVIAQNMANADTPGYRERDIAPFAETFARETAGTAMQASRTS 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-K 119
HL + +S W AP + + N V I ++ K+ +K ++ + K
Sbjct: 74 HLNGTAASAASW------APFETNAAGDPNRNNVSIEEQMLKAVEVKRQHDRALAIYKSS 127
Query: 120 LNSMVMHVVRG 130
+N + + + RG
Sbjct: 128 MNMLRVGLGRG 138
>gi|294500942|ref|YP_003564642.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
B1551]
gi|294350879|gb|ADE71208.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
B1551]
Length = 129
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETH 61
T FQ ++ S++Q+ +++NIAN TPNY++K + S F +L+ +T H
Sbjct: 6 TTFQTIENGISYASQKQQTIAQNIANVDTPNYKSKTVSRTSEFRDLLHNELEAYQTDSKH 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQ--TTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIK 118
+ SDSS + + Q T Q +GN V + E+ + YE L +L
Sbjct: 66 IPFSDSS---------QRAITQQGNTSYQANGNNVDMDKEMADMAENQIYYEALVDRLNG 116
Query: 119 KLNSMVMHVVRG 130
K NS+ V+RG
Sbjct: 117 KFNSL-QTVIRG 127
>gi|126738583|ref|ZP_01754288.1| flagellar basal-body rod protein; FlgB [Roseobacter sp.
SK209-2-6]
gi|126720382|gb|EBA17088.1| flagellar basal-body rod protein; FlgB [Roseobacter sp.
SK209-2-6]
Length = 129
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHET 60
+ F+IA A +RQ +VSENIANA TP Y AKDI F+ I M +
Sbjct: 5 LNVFKIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFKEIYASGTRPGEMIASRSN 64
Query: 61 HLKESDSSGLHW 72
HL + S L W
Sbjct: 65 HLNGAVGSDLDW 76
>gi|269138579|ref|YP_003295279.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
gi|267984239|gb|ACY84068.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
gi|304558589|gb|ADM41253.1| Flagellar basal-body rod protein FlgB [Edwardsiella tarda FL6-60]
Length = 137
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + + S
Sbjct: 9 FRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSRVLEQGRPDGSGIALSL 67
Query: 67 SSGLHWNAHVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYELNTKLIKK 119
+S H A ++ P LD V + GNTV + E + ++Y +L T L +
Sbjct: 68 TSSRHIPAQTLQPPSLDLLFRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDL-TVLSGQ 126
Query: 120 LNSMVMHVVRG 130
+ SM+ + +G
Sbjct: 127 IKSMMSVLQQG 137
>gi|271500063|ref|YP_003333088.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
gi|270343618|gb|ACZ76383.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
Length = 139
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + LN+ RT + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELNKVMEQGRTSNQSVSLNLTSTRHIPA 75
Query: 75 HVIEAP-LDQ----TTGVQVSGNTVGITNEL--YKSGHIKY 108
+E P LD T + GNTV + E + +KY
Sbjct: 76 QAVEPPALDLLYRVPTQPALDGNTVDMDRERTNFADNSLKY 116
>gi|319790423|ref|YP_004152056.1| flagellar basal-body rod protein FlgB [Thermovibrio ammonificans
HB-1]
gi|317114925|gb|ADU97415.1| flagellar basal-body rod protein FlgB [Thermovibrio ammonificans
HB-1]
Length = 124
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ AN+ +R ++ NIANA TP YR +D+ FE L + RT H+ ++ S
Sbjct: 13 EGANYFYQRAVVIQGNIANADTPFYRPRDL-VFEQELQNQLHLKRTSPKHMDPTEPS--- 68
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
E L+ TG GN V +T EL K + +L + IKK
Sbjct: 69 --RPFKEVVLNDVTG--YDGNKVNVTKELAKLAETALMTKLLDEAIKK 112
>gi|16760050|ref|NP_455667.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142179|ref|NP_805521.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161847|ref|ZP_03347557.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213424677|ref|ZP_03357442.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582034|ref|ZP_03363860.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213615929|ref|ZP_03371755.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648923|ref|ZP_03378976.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865508|ref|ZP_03387627.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289828583|ref|ZP_06546408.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|291084685|ref|ZP_06540939.2| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|25298905|pir||AG0639 probable flagellar basal-body rod protein FlgB (proximal rod
protein) STY1213 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16502344|emb|CAD08298.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137809|gb|AAO69370.1| putative flagellar basal-body rod protein FlgB [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
Length = 138
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + S +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALSLTSSRHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ +P DQ + + GNTV + E + +KY L T L +L M
Sbjct: 76 QAVSSPAVDLLYRVPDQPS---LDGNTVDMDRERTQFADNSLKYQMGL-TVLGSQLKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|220925381|ref|YP_002500683.1| flagellar basal body rod protein FlgB [Methylobacterium nodulans
ORS 2060]
gi|219949988|gb|ACL60380.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
2060]
Length = 134
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAH 75
W RQK+++EN+ANA+TP ++A+D+ + + + +A + + +S +H
Sbjct: 18 WHQTRQKVLAENVANANTPGFKARDLRA--PVFRPDGSLAASGPAGIVVERTSPMHLAGT 75
Query: 76 VIEAPLDQTT----GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
P ++ V SGN V + +E+ K+ + Y+L L +K
Sbjct: 76 GATGPAEERERTRFDVVPSGNAVSLEDEMLKAADNQASYQLAASLYQK 123
>gi|293395580|ref|ZP_06639863.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
gi|291421899|gb|EFE95145.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
Length = 137
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + + S +S H A
Sbjct: 17 NLRAQRQEILAGNIANADTPGYQARDI-DFASQLNKVMAQGRASGSGVALSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 QNLQPPQLDLLFRVPDQPSIDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|307131612|ref|YP_003883628.1| flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
gi|306529141|gb|ADM99071.1| Flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
Length = 139
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T + + N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R +
Sbjct: 7 TALRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELNKVMEQGRASGQSVSL 65
Query: 65 SDSSGLHWNAHVIEAP-LDQ----TTGVQVSGNTVGITNEL--YKSGHIKY 108
S +S H A ++ P LD T + GNTV + E + +KY
Sbjct: 66 SLTSARHIPAQTVQPPELDLLYRVPTQPALDGNTVDMDRERTNFADNSLKY 116
>gi|89056689|ref|YP_512140.1| flagellar basal body rod protein FlgB [Jannaschia sp. CCS1]
gi|88866238|gb|ABD57115.1| flagellar basal-body rod protein FlgB [Jannaschia sp. CCS1]
Length = 117
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE 45
+ FQ+AS A + RQ +V++NIANA TP YRA+D++ F+
Sbjct: 5 LEIFQLASGLARHSASRQAVVAQNIANADTPGYRARDVADFQ 46
>gi|261339373|ref|ZP_05967231.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
ATCC 35316]
gi|288318174|gb|EFC57112.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
ATCC 35316]
Length = 138
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + R T + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFSSELKKVMERGRAEGTGVALAMTSSRHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ AP DQ + + GNTV + E + Y++ ++ +M+
Sbjct: 76 QAMTAPTADLLYRIPDQPS---LDGNTVDMDRERTQFADNSLKYQMGLTVLGGQIKGMMN 132
Query: 127 VVRG 130
V++G
Sbjct: 133 VLQG 136
>gi|212639570|ref|YP_002316090.1| flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
WK1]
gi|212561050|gb|ACJ34105.1| Flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
WK1]
Length = 126
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
FQI Q N+ S +QK+++ NIAN TPN++AKD+ F T +Q RT H +
Sbjct: 8 FQILEQGLNYSSLKQKVIANNIANVDTPNFKAKDV-QFRTEFHQALQAYRTDPRHFE 63
>gi|238788312|ref|ZP_04632106.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
33641]
gi|238723558|gb|EEQ15204.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
33641]
Length = 137
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRVNGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPSLDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|71906388|ref|YP_283975.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
gi|71846009|gb|AAZ45505.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
Length = 135
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
Q ++ F SQ N ++R ++++ NIANA TPNY+A+D SFE+ + QN + R + +
Sbjct: 6 QELSVF---SQAMNLRTQRHQVLASNIANADTPNYKARDF-SFESAM-QNAMAGRGNGSV 60
Query: 62 LKESDSSG---LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ SSG N + + T V GNTV + E + Y++ ++LI
Sbjct: 61 ALATTSSGHLQGAGNGGLAALQFRRETQSAVDGNTVDMDVERSEISENALQYQIVSQLI 119
>gi|238751759|ref|ZP_04613247.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380]
gi|238710030|gb|EEQ02260.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380]
Length = 137
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLQKVMEQGRVNGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|238764389|ref|ZP_04625339.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
33638]
gi|238697415|gb|EEP90182.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
33638]
Length = 137
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRVNGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|238793995|ref|ZP_04637613.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
29909]
gi|238726627|gb|EEQ18163.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
29909]
Length = 137
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRANGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|46200793|ref|ZP_00056513.2| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 132
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE--TILN--QNFLMARTHE 59
+T F++A +W ++RQ++++ N+ANA+TP Y +D+ F+ +L Q +A TH
Sbjct: 5 LTIFKMARARMDWAAQRQEVLAGNVANANTPRYLPRDVRKFDFKEMLAEVQAPPLATTHS 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY-------LYEL 112
H+ S+ L P + T +GN V + ++ K K +Y+
Sbjct: 65 QHIAGPASNPLA--VETTRKPFESTP----NGNGVVLEEQMAKISDTKGAHNMAADIYQK 118
Query: 113 NTKLIK 118
N K+++
Sbjct: 119 NLKMMR 124
>gi|300716215|ref|YP_003741018.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
gi|299062051|emb|CAX59167.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
Length = 137
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + +N+ R + L + +S H A
Sbjct: 17 NLRAQRQEILASNIANADTPGYQARDI-DFASQMNKVMEQGRAEGSGLSLAVTSARHIPA 75
Query: 75 HVIE-APLDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMVMHV 127
++ A +D V + GNTV + E + +KY +L T + ++ SM M V
Sbjct: 76 ETLQPASIDLMYRVPDQPAMDGNTVDMDRERTQFADNSLKYQTDL-TVISGQIKSM-MAV 133
Query: 128 VRG 130
++G
Sbjct: 134 LQG 136
>gi|238799104|ref|ZP_04642560.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
gi|238717051|gb|EEQ08911.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
Length = 137
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLQKVMEQGRASGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|123442787|ref|YP_001006764.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|332161319|ref|YP_004297896.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|2494519|sp|Q56893|FLGB_YEREN RecName: Full=Flagellar basal-body rod protein flgB
gi|793898|emb|CAA88192.1| flgB [Yersinia enterocolitica]
gi|122089748|emb|CAL12601.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|318605239|emb|CBY26737.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665549|gb|ADZ42193.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 137
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRASGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|257471392|ref|ZP_05635391.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|11386804|sp|P57419|FLGB_BUCAI RecName: Full=Flagellar basal-body rod protein flgB
gi|311086075|gb|ADP66157.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086646|gb|ADP66727.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087232|gb|ADP67312.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087751|gb|ADP67830.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 133
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHE 59
F Q N S+RQ+I+S NIANA TP Y++ D +F+ LN+ + +T
Sbjct: 9 FNFHQQALNLCSQRQEILSANIANADTPGYKSIDF-NFKNELNKTLYKNKKTIFLKKTSP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLI 117
HL E H N +++ T ++ GNTV + E + + IKY L I
Sbjct: 68 NHLNEK-----HKNLFLLKTIPVLTNQIKQDGNTVNMDRERIEFLNNSIKYQSSL--VFI 120
Query: 118 KKLNSMVMHVVRG 130
K +M+V++G
Sbjct: 121 KNEIKNMMYVLKG 133
>gi|95929846|ref|ZP_01312587.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
DSM 684]
gi|95134142|gb|EAT15800.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
DSM 684]
Length = 136
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFL-----MARTHETHLKESDSSGLHWNAH 75
Q+I++ N+ANA TP Y+AK + FE L Q MA TH H+ S G N
Sbjct: 25 QQIIAANVANAQTPGYQAKTFT-FEDALRQAATGKGTDMAVTHPQHI--STHGGSINNVT 81
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ T+G+ NTV + E+ + +YE T+L+ K S+V +VV+G
Sbjct: 82 GTVGEIRDTSGMG-DRNTVEVDQEMVNLAENQIMYEATTQLLNKKLSIVKYVVQG 135
>gi|168234100|ref|ZP_02659158.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469067|ref|ZP_03075051.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194455431|gb|EDX44270.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331910|gb|EDZ18674.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 138
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + S +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALSLTSSHHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ +P DQ + + GNTV + E + +KY L T L +L M
Sbjct: 76 QAVSSPAVDLLYRVPDQPS---LDGNTVDMDRERTQFADNSLKYQMGL-TVLGSQLKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|170743259|ref|YP_001771914.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
gi|168197533|gb|ACA19480.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
Length = 133
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAH 75
W RQK+++EN+ANA+TP ++A+D+ + + + +A + +S LH
Sbjct: 18 WHQTRQKVLAENVANANTPGFKARDLRA--PVFQPDGSVAAAGLPGIGVERTSPLHMAGT 75
Query: 76 VIEAPLDQTT---GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
D+T V SGN V + +E+ K+ + Y+L L +K
Sbjct: 76 GFTPSEDRTRTRFDVVPSGNAVSLEDEMLKAADNQADYQLAASLYQK 122
>gi|238758113|ref|ZP_04619293.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
gi|238703651|gb|EEP96188.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
Length = 137
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N S+RQ+++S NIANA TP ++A+DI F + L + R + T + S +S H A
Sbjct: 17 NLRSQRQEVLSSNIANADTPGFQARDI-DFSSQLKKVMEQGRVNGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKY 108
++ P LD V + GNTV + E + +KY
Sbjct: 76 STVQPPDLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKY 116
>gi|157738172|ref|YP_001490856.1| flagellar basal body rod protein FlgB [Arcobacter butzleri RM4018]
gi|315636315|ref|ZP_07891565.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
gi|157700026|gb|ABV68186.1| flagellar basal body rod protein FlgB [Arcobacter butzleri RM4018]
gi|315479404|gb|EFU70087.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
Length = 132
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKESDSS 68
+ N+ E+QK++S NIAN +TPNY+ KD+ F+ L++N + RT H+ D +
Sbjct: 12 EQLNFRGEKQKVISSNIANVNTPNYKTKDL-VFQEELDKNSNMLQLKRTTNNHMYNLDFT 70
Query: 69 GLHWNAHVIEAPLDQTTGV--QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N +I+ P G+ Q GN V + +++ + K L++ IK+ +++
Sbjct: 71 Q-SSNQKLIQVP-----GLVEQNDGNNVNLDSQMSEQSKNKILFDGIQATIKRDSNLFKS 124
Query: 127 VV 128
V+
Sbjct: 125 VI 126
>gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
Length = 130
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLKESDSSGLHWNAHVI 77
R + +SENI+NA TP YR K + SF+T + A+ T + HL ++ ++ AH
Sbjct: 21 RLRHLSENISNADTPGYRRK-LVSFQTAFSLGDAPAKVQTGKVHLDQTALEKVYDPAH-- 77
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL TG Q G+ V + EL + + YE N K+ +K++S +M ++R
Sbjct: 78 --PLADDTG-QYDGSNVNLLIELADAKEAQRSYEANLKMFEQTRKMSSGLMDLLR 129
>gi|238785500|ref|ZP_04629483.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
gi|238713602|gb|EEQ05631.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
Length = 137
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVVEQGRVSGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 STVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|300311349|ref|YP_003775441.1| Flagellar basal-body rod protein FlgB [Herbaspirillum seropedicae
SmR1]
gi|300074134|gb|ADJ63533.1| Flagellar basal-body rod FlgB protein [Herbaspirillum seropedicae
SmR1]
Length = 142
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---------QNFLMAR 56
FF+ N ++RQ++++ NIANA TPNY+A+D++ + + N +AR
Sbjct: 8 FFRFNEMAMNLRAQRQQVLASNIANADTPNYKARDVNFADALKNALDNKATAMPPLELAR 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGIT---NELYKSGHIKY 108
T TH+ + + + +PL T Q V GNTV + NE +G ++Y
Sbjct: 68 TAATHVPGTAPE--NGPGSIGGSPLLYRTVTQGSVDGNTVDLDVERNEFVDNG-LRY 121
>gi|23092312|gb|AAN08637.1| FlgB [Aeromonas hydrophila]
Length = 132
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 17/118 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLK-ESDSSGLH 71
S+R +++S NIANA TP ++A+DI +F L Q F +A T E H +SD+ GL
Sbjct: 20 SKRAEVLSSNIANADTPGFKARDI-NFSQALEEAQHQQGFGLATTSEKHFALQSDAPGLT 78
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
PL TG GNTV + E +S ++ E T L + +NS + +++
Sbjct: 79 Q----YRNPLQPDTG---DGNTVDVQQE--RSEFLRNSLEYQTSL-EFMNSKISGLLK 126
>gi|295096228|emb|CBK85318.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 138
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + R T + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFSSELKKVMERGRAEGTGVSLALTSSRHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ AP DQ + + GNTV + E + Y+ L+ +M
Sbjct: 76 QAMTAPTTDLLYRIPDQPS---LDGNTVDMDRERTQFADNSLQYQTGLTLLGGQIKGMMT 132
Query: 127 VVRG 130
V++G
Sbjct: 133 VLQG 136
>gi|295690699|ref|YP_003594392.1| flagellar basal-body rod protein Flgb [Caulobacter segnis ATCC
21756]
gi|295432602|gb|ADG11774.1| flagellar basal-body rod protein FlgB [Caulobacter segnis ATCC
21756]
Length = 150
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQ---------- 50
I F + +L+ERQ++V++N+ANA T YR +D+ F +++NQ
Sbjct: 9 IPLFGMLKSRLGYLTERQRLVAQNVANADTAGYRPQDLKQFSFQASLMNQTSGAVYRGGV 68
Query: 51 -----NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
M T +HL S++ W A A D T + GN V + +++ K +
Sbjct: 69 AAPTNGVRMIATSASHLAPSNAPS-AWRA---TAGADSET--TLDGNAVSLEDQMIKMTN 122
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
+ Y+ +K +M+ R
Sbjct: 123 ARMNYDAAISFYQKSMTMLRMAAR 146
>gi|237731004|ref|ZP_04561485.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
gi|226906543|gb|EEH92461.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
Length = 138
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+D+ F + L + + R + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDL-DFASELKKVMVRGREETGGVSLTLTSAQHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ AP DQ + + GNTV + E + +KY L T L ++ M
Sbjct: 76 QTVSAPSTELLYRIPDQPS---LDGNTVDMDRERTQFADNSLKYQMGL-TALGGQIKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC3088]
gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC3088]
Length = 124
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--MARTHETHL 62
+ F + Q S+R +++++NIANA TP ++A+D+ + + Q + TH+ HL
Sbjct: 3 SIFGVHEQALVLKSQRLQVLAKNIANADTPGFKARDVDFKQVLAAQAGFGSLVTTHKRHL 62
Query: 63 KE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
K S+ GL + + A LD GNTV I+ E K G Y + + +++
Sbjct: 63 KTALSNQDGLVYT-NPYNAGLD--------GNTVEISAEQAKYGEAAIEYRASLEFLQRR 113
Query: 121 NSMVMHVVRG 130
S + ++G
Sbjct: 114 ISGIKRALKG 123
>gi|22126393|ref|NP_669816.1| flagellar basal body rod protein FlgB [Yersinia pestis KIM 10]
gi|45441412|ref|NP_992951.1| flagellar basal body rod protein FlgB [Yersinia pestis biovar
Microtus str. 91001]
gi|51596008|ref|YP_070199.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
IP 32953]
gi|108807170|ref|YP_651086.1| flagellar basal body rod protein FlgB [Yersinia pestis Antiqua]
gi|108812486|ref|YP_648253.1| flagellar basal body rod protein FlgB [Yersinia pestis Nepal516]
gi|145598613|ref|YP_001162689.1| flagellar basal body rod protein FlgB [Yersinia pestis Pestoides F]
gi|149366254|ref|ZP_01888289.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
gi|153947522|ref|YP_001401293.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
IP 31758]
gi|162419951|ref|YP_001606470.1| flagellar basal body rod protein FlgB [Yersinia pestis Angola]
gi|165925964|ref|ZP_02221796.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938769|ref|ZP_02227324.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010954|ref|ZP_02231852.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211185|ref|ZP_02237220.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401128|ref|ZP_02306631.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420101|ref|ZP_02311854.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425829|ref|ZP_02317582.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469717|ref|ZP_02334421.1| flagellar basal-body rod protein FlgB [Yersinia pestis FV-1]
gi|170024650|ref|YP_001721155.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
YPIII]
gi|186895111|ref|YP_001872223.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
PB1/+]
gi|218928919|ref|YP_002346794.1| flagellar basal body rod protein FlgB [Yersinia pestis CO92]
gi|229896239|ref|ZP_04511409.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A]
gi|229897174|ref|ZP_04512330.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229897900|ref|ZP_04513051.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902868|ref|ZP_04517985.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
gi|270486648|ref|ZP_06203722.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
gi|294504033|ref|YP_003568095.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|21959380|gb|AAM86067.1|AE013854_3 cell-proximal portion of basal-body rod protein [Yersinia pestis
KIM 10]
gi|45436273|gb|AAS61828.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Microtus str. 91001]
gi|51589290|emb|CAH20911.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
IP 32953]
gi|108776134|gb|ABG18653.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
gi|108779083|gb|ABG13141.1| flagellar basal-body rod protein FlgB [Yersinia pestis Antiqua]
gi|115347530|emb|CAL20439.1| flagellar basal-body rod protein FlgB [Yersinia pestis CO92]
gi|145210309|gb|ABP39716.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides F]
gi|149292667|gb|EDM42741.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
gi|152959017|gb|ABS46478.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
IP 31758]
gi|162352766|gb|ABX86714.1| flagellar basal-body rod protein FlgB [Yersinia pestis Angola]
gi|165913383|gb|EDR32005.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922168|gb|EDR39345.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990298|gb|EDR42599.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166208365|gb|EDR52845.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166961796|gb|EDR57817.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049517|gb|EDR60925.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055228|gb|EDR65025.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751184|gb|ACA68702.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
YPIII]
gi|186698137|gb|ACC88766.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
PB1/+]
gi|229680315|gb|EEO76414.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
gi|229688941|gb|EEO81006.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693511|gb|EEO83560.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701162|gb|EEO89191.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A]
gi|262361781|gb|ACY58502.1| flagellar basal body rod protein [Yersinia pestis D106004]
gi|262366083|gb|ACY62640.1| flagellar basal body rod protein [Yersinia pestis D182038]
gi|270335152|gb|EFA45929.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
gi|294354492|gb|ADE64833.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|320015470|gb|ADV99041.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 137
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S +S H A
Sbjct: 17 NLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRANGTGVSLSLTSARHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P DQ + GNTV + E + +KY +L
Sbjct: 76 TTVQPPDLDLLFRIPDQPA---MDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|307823528|ref|ZP_07653757.1| flagellar basal-body rod protein FlgB [Methylobacter tundripaludum
SV96]
gi|307735513|gb|EFO06361.1| flagellar basal-body rod protein FlgB [Methylobacter tundripaludum
SV96]
Length = 130
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 31/129 (24%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----LMARTHETHLKESDSSGLH 71
+ +R +I++ N+ANA TPN++A+D+ F+++L Q+ M RTH H+
Sbjct: 18 FREKRGEILAANLANADTPNFKARDV-DFKSVLKQSMTSGVAMERTHAGHI--------- 67
Query: 72 WNAHVIEAPLDQTTG----------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
AP Q G V + GNTV E K Y+ + + I
Sbjct: 68 -------APQQQVVGANVMYRNPYQVSLDGNTVEAHVEQAKYAENAVQYQASLQFISNKF 120
Query: 122 SMVMHVVRG 130
S +M VRG
Sbjct: 121 SGLMTAVRG 129
>gi|74317655|ref|YP_315395.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
ATCC 25259]
gi|74057150|gb|AAZ97590.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
ATCC 25259]
Length = 133
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+RQ++++ NIANA TP+Y+A+D+ F+T L +T T L + L A
Sbjct: 20 DQRQQVLASNIANADTPHYKARDL-DFKTALQGALQGTQTGGTALATTAPGHLAGKAGGS 78
Query: 78 EAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYELN-TKLIKKLNSMVMHV 127
+A L T Q V GNTV + E YE N T+L +++ ++ +
Sbjct: 79 DAGLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRLNQQIKGLLAAI 131
>gi|21672601|ref|NP_660668.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008459|sp|Q8K9K9|FLGB_BUCAP RecName: Full=Flagellar basal-body rod protein flgB
gi|21623232|gb|AAM67879.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 133
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETI------LNQNFLMARTHETHLKESDSS 68
N ++RQ+I+S NIANA TPNY+A DI+ + + N + + +T HL +
Sbjct: 17 NLYAKRQEILSSNIANADTPNYKAMDINFKDEMDKITKKSNLDITLTKTSSHHL-----N 71
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
N + E + +Q +GNTV + E + YE N IK +M+V+
Sbjct: 72 PRKKNFFIFEVKPITSKEIQSNGNTVDMNRERIEFIKNTLKYEENLVFIKNEIKNIMNVL 131
Query: 129 RG 130
+G
Sbjct: 132 KG 133
>gi|212634345|ref|YP_002310870.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
WP3]
gi|212555829|gb|ACJ28283.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
WP3]
Length = 132
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S+R +++S NIANA TPNY+A+D+ F +N A++ ++ L + S G H++ +
Sbjct: 20 SQRAEVLSSNIANADTPNYKARDV-DFAKAMNS----AQSRQSGLAMAKSDGKHFDMAAL 74
Query: 78 -------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P TG GNTV I E Y+++ + S + +RG
Sbjct: 75 TQQNVAYRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDGKFSGMKKAIRG 131
>gi|154253012|ref|YP_001413836.1| flagellar basal-body rod protein FlgB [Parvibaculum lavamentivorans
DS-1]
gi|154156962|gb|ABS64179.1| flagellar basal-body rod protein FlgB [Parvibaculum lavamentivorans
DS-1]
Length = 142
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F + Q +WL+ RQ+++++N+AN+ TP Y AKD+ L+ L+ R+ + L
Sbjct: 6 LPIFDMMKQRLHWLTARQQVLAQNVANSDTPGYAAKDLKE----LDFGALVKRSGPS-LT 60
Query: 64 ESDSSGLHWNAHV-----IEAPLDQTTGVQV----------SGNTVGITNELYKSGHIKY 108
+ G H + V P Q+TG QV SGN+V + ++ K +
Sbjct: 61 PVATQGGHIGSPVSGHGNFFRP-GQSTGGQVVKKADFETSPSGNSVVLEEQMIKVAETQM 119
Query: 109 LYELNTKLIKK 119
Y+ T L K
Sbjct: 120 DYQTVTGLYSK 130
>gi|311068139|ref|YP_003973062.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
gi|310868656|gb|ADP32131.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
Length = 129
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ NIAN TPNY+AK + SF+ +LNQ + +T + D S N ++
Sbjct: 21 KQKVITNNIANIDTPNYKAKKV-SFQNLLNQESSRLESVKTDYRHVDFSDTGSNGSIVA- 78
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
+ T Q +GN V I E+
Sbjct: 79 --NSNTAYQQNGNNVDIDKEM 97
>gi|317047688|ref|YP_004115336.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
gi|316949305|gb|ADU68780.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
Length = 137
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N +ERQ+I++ NIANA TP Y+A+DI F + L++ R+ + L +
Sbjct: 9 LRFGTEALNLRAERQEILASNIANADTPGYQARDI-DFASQLSKVMENGRSEGSSLALNV 67
Query: 67 SSGLHWNAHVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+S H A P DQ GNTV + E + Y+ + LI
Sbjct: 68 TSARHIEAQTNSQPSMDLLYRIPDQPA---ADGNTVDMDRERTQFADNSLKYQTDLTLIS 124
Query: 119 KLNSMVMHVVRG 130
+M V++G
Sbjct: 125 SQIKGMMSVLQG 136
>gi|296102911|ref|YP_003613057.1| flagellar basal body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057370|gb|ADF62108.1| flagellar basal body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 139
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFSSELKKVMERGRAEGSGVALALTSSRHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ AP DQ + + GNTV + E + Y++ ++ +M+
Sbjct: 76 QAMTAPTTDLLYRIPDQPS---LDGNTVDMDRERTQFADNSLKYQMGLTVLGGQIKGMMN 132
Query: 127 VVRG 130
V++G
Sbjct: 133 VLQG 136
>gi|161503738|ref|YP_001570850.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865085|gb|ABX21708.1| hypothetical protein SARI_01823 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 138
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVSLTLTSSHHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ +P DQ + + GNTV + E + +KY L T L +L M
Sbjct: 76 QAVSSPAVDLLYRVPDQPS---LDGNTVDMDRERAQFADNSLKYQMGL-TVLGSQLKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|297538893|ref|YP_003674662.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301]
gi|297258240|gb|ADI30085.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301]
Length = 140
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDI-------SSFETILNQNFLMARTHETHL 62
H N L +RQ++++ NIANA TPN++A+DI S+ I F A+T HL
Sbjct: 12 HQNALRVRGQRQELIAANIANADTPNFKARDIDFKAAMQSAVAGINKDAFQTAKTSPLHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S +S + +A E V GNTV + E + YE + LI
Sbjct: 72 DGSRASNSNTSAAPGEPLFRPIIQGSVDGNTVDMDVERNQFADNGIRYEASLTLI 126
>gi|53724562|ref|YP_104795.1| flagellar basal body rod protein FlgB [Burkholderia mallei ATCC
23344]
gi|67641535|ref|ZP_00440312.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
horse 4]
gi|121600142|ref|YP_994288.1| flagellar basal body rod protein FlgB [Burkholderia mallei SAVP1]
gi|124384637|ref|YP_001028063.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
10229]
gi|126450078|ref|YP_001082870.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
10247]
gi|126451866|ref|YP_001064561.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
1106a]
gi|167001533|ref|ZP_02267328.1| flagellar basal-body rod protein FlgB [Burkholderia mallei PRL-20]
gi|167813798|ref|ZP_02445478.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
91]
gi|167822315|ref|ZP_02453786.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 9]
gi|167892407|ref|ZP_02479809.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
7894]
gi|167900905|ref|ZP_02488110.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
NCTC 13177]
gi|167917161|ref|ZP_02504252.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
BCC215]
gi|217424904|ref|ZP_03456400.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
576]
gi|226199738|ref|ZP_03795289.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pakistan 9]
gi|242317296|ref|ZP_04816312.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1106b]
gi|254174732|ref|ZP_04881393.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
10399]
gi|254182143|ref|ZP_04888740.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
gi|254188073|ref|ZP_04894585.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pasteur 52237]
gi|254196553|ref|ZP_04902977.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
S13]
gi|254201893|ref|ZP_04908257.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
gi|254207227|ref|ZP_04913578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
gi|254359729|ref|ZP_04976000.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
2002721280]
gi|52427985|gb|AAU48578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
23344]
gi|121228952|gb|ABM51470.1| flagellar basal-body rod protein FlgB [Burkholderia mallei SAVP1]
gi|124292657|gb|ABN01926.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
10229]
gi|126225508|gb|ABN89048.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1106a]
gi|126242948|gb|ABO06041.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
10247]
gi|147747787|gb|EDK54863.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
gi|147752769|gb|EDK59835.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
gi|148028943|gb|EDK86875.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
2002721280]
gi|157935753|gb|EDO91423.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pasteur 52237]
gi|160695777|gb|EDP85747.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
10399]
gi|169653296|gb|EDS85989.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
S13]
gi|184212681|gb|EDU09724.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
gi|217391924|gb|EEC31950.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
576]
gi|225928089|gb|EEH24125.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pakistan 9]
gi|238522486|gb|EEP85930.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
horse 4]
gi|242140535|gb|EES26937.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1106b]
gi|243062735|gb|EES44921.1| flagellar basal-body rod protein FlgB [Burkholderia mallei PRL-20]
Length = 163
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 15/103 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ F + L AR LK+ D
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTL------ARA----LKQ-D 56
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ NA + PL Q GV SG ++ T+ ++ +G++K +
Sbjct: 57 GAASAGNAAQL--PLAQPAGV-ASGMSMATTSGVHLAGNVKLI 96
>gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
Length = 135
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES-----DSSG 69
N+ RQ+I+S NIANA TP Y+AK + FE L + + + + ++S S G
Sbjct: 16 NFRQMRQEIISSNIANAETPGYKAKRV-DFEQALARALDVDGQQQLNTEDSRHFDVGSGG 74
Query: 70 L-HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ V E P V GNTV EL + K LY+ +LI K ++ + V
Sbjct: 75 FGNLQPEVYEDP---NGIVSEDGNTVDRDAELARMAENKILYDATVQLINKKFGLMKYAV 131
>gi|291613035|ref|YP_003523192.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus
ES-1]
gi|291583147|gb|ADE10805.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus
ES-1]
Length = 134
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILN---QNFLMARTHETHLKESDSS 68
N + RQ++++ NIANA TPNY+AKDI S+ + L+ + +A T HL +
Sbjct: 17 NLRAARQELIASNIANADTPNYKAKDIDFASALQGALSGSGEKLQVAVTSPLHLAGTTGE 76
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ + PL + GNTV + E + YE + K I V+ +
Sbjct: 77 SVMGAPVLYRKPLQPS----ADGNTVDMDVERAQFADNALRYEASVKFISDDVKDVLSAL 132
Query: 129 RG 130
+G
Sbjct: 133 QG 134
>gi|16764530|ref|NP_460145.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62179691|ref|YP_216108.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161614603|ref|YP_001588568.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553038|ref|ZP_02346788.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994038|ref|ZP_02575130.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168237256|ref|ZP_02662314.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244773|ref|ZP_02669705.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264033|ref|ZP_02686006.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467126|ref|ZP_02700968.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822617|ref|ZP_02834617.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445886|ref|YP_002040428.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449295|ref|YP_002045173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194737837|ref|YP_002114173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250045|ref|YP_002146869.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262046|ref|ZP_03162120.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198242083|ref|YP_002215963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200390920|ref|ZP_03217531.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930812|ref|ZP_03221685.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205353088|ref|YP_002226889.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857318|ref|YP_002243969.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224584322|ref|YP_002638120.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911006|ref|ZP_04654843.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|120293|sp|P16437|FLGB_SALTY RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|47669|emb|CAA36309.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|217058|dbj|BAA02861.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16419691|gb|AAL20104.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62127324|gb|AAX65027.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161363967|gb|ABX67735.1| hypothetical protein SPAB_02353 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404549|gb|ACF64771.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407599|gb|ACF67818.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194713339|gb|ACF92560.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630354|gb|EDX48980.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213748|gb|ACH51145.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197240301|gb|EDY22921.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289757|gb|EDY29118.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197936599|gb|ACH73932.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603365|gb|EDZ01911.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320271|gb|EDZ05475.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205272869|emb|CAR37798.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322410|gb|EDZ10249.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328023|gb|EDZ14787.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205336425|gb|EDZ23189.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341041|gb|EDZ27805.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347333|gb|EDZ33964.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709121|emb|CAR33454.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468849|gb|ACN46679.1| flagellar basal body rod protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261246385|emb|CBG24194.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992948|gb|ACY87833.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157715|emb|CBW17207.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912161|dbj|BAJ36135.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086386|emb|CBY96159.1| Flagellar basal-body rod protein flgB putative proximal rod protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|321223792|gb|EFX48855.1| Flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616544|gb|EFY13453.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620515|gb|EFY17379.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622509|gb|EFY19354.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629660|gb|EFY26435.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632620|gb|EFY29366.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636885|gb|EFY33588.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641577|gb|EFY38215.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644067|gb|EFY40613.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650032|gb|EFY46450.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653958|gb|EFY50281.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658490|gb|EFY54752.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663348|gb|EFY59550.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670082|gb|EFY66222.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674854|gb|EFY70945.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676676|gb|EFY72743.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682598|gb|EFY78617.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686649|gb|EFY82628.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322714161|gb|EFZ05732.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323129444|gb|ADX16874.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195763|gb|EFZ80939.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198345|gb|EFZ83449.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203171|gb|EFZ88201.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209174|gb|EFZ94111.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209678|gb|EFZ94607.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217866|gb|EGA02581.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222154|gb|EGA06538.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224926|gb|EGA09184.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229668|gb|EGA13791.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232893|gb|EGA16989.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240628|gb|EGA24670.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242942|gb|EGA26963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250259|gb|EGA34148.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252634|gb|EGA36472.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258838|gb|EGA42491.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261027|gb|EGA44620.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266936|gb|EGA50421.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269977|gb|EGA53426.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326623711|gb|EGE30056.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628168|gb|EGE34511.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332988065|gb|AEF07048.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 138
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALTLTSSHHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ +P DQ + + GNTV + E + +KY L T L +L M
Sbjct: 76 QAVSSPAVDLLYRVPDQPS---LDGNTVDMDRERTQFADNSLKYQMGL-TVLGSQLKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|83858797|ref|ZP_00952319.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
gi|83853620|gb|EAP91472.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
Length = 138
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 1 MQP--ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETIL-NQNFLMA 55
M+P I + + RQ++++EN+ANA+TP Y DI S FE +L Q L A
Sbjct: 1 MRPDDIPLLAMLRDTMGYHGARQRVIAENVANANTPGYTPNDIPRSEFERVLAGQQGLGA 60
Query: 56 ----RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
TH H ++ G AP +TT V+GN+V I ++ + + +E
Sbjct: 61 VGLRTTHAQHYG-GETGGGSAQFRTERAPDSETT---VNGNSVVIEEQMVDANENRMRFE 116
Query: 112 LNTKLIKKLNSMVMHVVR 129
L +K +M+ R
Sbjct: 117 TALSLYQKSLNMIRMASR 134
>gi|56413839|ref|YP_150914.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197362762|ref|YP_002142399.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56128096|gb|AAV77602.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197094239|emb|CAR59744.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 138
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFTSELKKVMVRGREETGGVALTLTSSHHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ +P DQ + + GNTV + E + +KY L T L +L M
Sbjct: 76 QAVSSPAVDLLYRVPDQPS---LDGNTVDMDRERTQFADNSLKYQMGL-TVLGSQLKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|270262404|ref|ZP_06190675.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
gi|270043088|gb|EFA16181.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
Length = 137
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F LN+ R + + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFAGQLNKVLAQGRVSGSGIALNMTSARHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 QNMQPPQLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|304397201|ref|ZP_07379080.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
gi|304355350|gb|EFM19718.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
Length = 137
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + +
Sbjct: 9 LKFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASELSRVMSNGRAEGSSMALKV 67
Query: 67 SSGLHWNAHVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+S H A AP DQ + GNTV + E + Y+ + LI
Sbjct: 68 TSARHIEAQTNGAPSMDMLYRIPDQPS---ADGNTVDMDRERTQFADNSLKYQTDLTLIS 124
Query: 119 KLNSMVMHVVRG 130
+M V++G
Sbjct: 125 SQIKGMMSVLQG 136
>gi|238755327|ref|ZP_04616670.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC 29473]
gi|238706463|gb|EEP98837.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC 29473]
gi|253317692|gb|ACT22781.1| flagellar basal body protein FlgB [Yersinia ruckeri]
Length = 137
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I+S NIANA TP ++A+DI F + L + R + + + S ++ H A
Sbjct: 17 NLRAQRQEILSANIANADTPGFQARDI-DFSSQLQKVMEQGRVNGSGMSLSLTAARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
I+ P LD V + GNTV + E + +KY +L
Sbjct: 76 QNIQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|149375037|ref|ZP_01892810.1| Flagellar basal body protein [Marinobacter algicola DG893]
gi|149360926|gb|EDM49377.1| Flagellar basal body protein [Marinobacter algicola DG893]
Length = 132
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSSGLHW 72
+R ++++ N+ANA TP Y+A+D+ F+ ++ + F M RTHE+H+ D+S +
Sbjct: 21 KRAEVLANNLANADTPGYKARDV-DFQAMMQKAQDSMSGFGMTRTHESHM---DTSSMGA 76
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNE 99
++ ++ Q + V GNTV E
Sbjct: 77 DSELLYRVPHQPS---VDGNTVDAQQE 100
>gi|323341389|ref|ZP_08081633.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
25644]
gi|323091266|gb|EFZ33894.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
25644]
Length = 121
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETHLKESDSSGLHWNAHV 76
R +++S NIAN +TPNY+AK + FE+ L+Q + + TH+ H++ +SG + +
Sbjct: 17 RSELISNNIANVNTPNYKAKRV-VFESQLSQAMDSLNLTETHKNHMQTGGTSGPYITS-- 73
Query: 77 IEAPLDQTTGVQVSGNTVGITNEL 100
+ TG Q +GN V + E+
Sbjct: 74 ------RNTGFQKNGNNVDVDTEM 91
>gi|221199736|ref|ZP_03572779.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2M]
gi|221208659|ref|ZP_03581659.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2]
gi|221215568|ref|ZP_03588531.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD1]
gi|221164556|gb|EED97039.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD1]
gi|221171470|gb|EEE03917.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2]
gi|221179975|gb|EEE12379.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2M]
Length = 162
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ T+ AR+ LK+++
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFASTL-------ARS----LKQAN 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
NA + PL Q GV SG T+ T + +G +K +
Sbjct: 58 GGLAPSNAAQL--PLAQPAGV-TSGMTMASTAPGHMAGTVKLI 97
>gi|251789165|ref|YP_003003886.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
gi|247537786|gb|ACT06407.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
Length = 139
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + S +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELNKVMEKGRVDGQSVSLSLTSSRHIPA 75
Query: 75 HVIEAP-LDQ----TTGVQVSGNTVGITNEL--YKSGHIKY 108
+ P LD T + GNTV + E + +KY
Sbjct: 76 QTAQPPALDLLYRVPTQPALDGNTVDMDRERTNFADNSLKY 116
>gi|296330832|ref|ZP_06873307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674350|ref|YP_003866022.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296151837|gb|EFG92711.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412594|gb|ADM37713.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 129
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ NIAN TPNY+AK + SF+ +L+Q +T + D SG N ++ +
Sbjct: 21 KQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLEAIKTDYRHIDFSGTDSNYSIVTS 79
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V + E+
Sbjct: 80 G---DTSYQQNGNNVDVDKEM 97
>gi|220924393|ref|YP_002499695.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
2060]
gi|219949000|gb|ACL59392.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
2060]
Length = 119
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
M + +A + A LS RQ V+ NIANA TP YRA+D+ F I
Sbjct: 1 MSGVYLIDLALREAQHLSARQATVAGNIANADTPGYRARDVVPFRPI 47
>gi|240139295|ref|YP_002963770.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
AM1]
gi|240009267|gb|ACS40493.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
AM1]
Length = 138
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDIS-------SFETILNQNF---LMARTHETHLKES 65
W RQ +++EN+ANA P +R +D++ T + + +ART TH+ +
Sbjct: 18 WHQARQALLAENVANADMPGFRPRDLAEPSAASMKLATPVAASVGGDGLARTDSTHIGMT 77
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S+G + + + V+ SGN V + E+ K+G + Y+L L +K
Sbjct: 78 ASAGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQSDYQLVASLYQK 126
>gi|254510289|ref|ZP_05122356.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
KLH11]
gi|221534000|gb|EEE36988.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
KLH11]
Length = 115
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF---LMARTHETHLKESDSSGL 70
A +RQ ++S N+ANA TP Y+ KDI+ F+ + + M T + HL S
Sbjct: 2 ATHAGQRQAVISRNMANADTPGYQPKDITPFQNVFENSAAGGAMTATRQGHL-HGISDAR 60
Query: 71 HW---NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
HW AH P +GN V + E+ K+ +K ++
Sbjct: 61 HWAEYKAHPASEP---------NGNGVSLEEEMLKAVDVKRQHD 95
>gi|209545548|ref|YP_002277777.1| putative flagellar basal-body rod protein FlgB [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533225|gb|ACI53162.1| putative flagellar basal-body rod protein FlgB [Gluconacetobacter
diazotrophicus PAl 5]
Length = 139
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
+A +WL R+ +++ N+ANA+TP Y KD++ F+ +L + M A+T H+
Sbjct: 17 LLGLAKDRLHWLEARESVLAGNVANANTPGYVPKDMTPFQGVLQEQMGMTLAQTEPGHM 75
>gi|167568104|ref|ZP_02361020.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
EO147]
gi|167574222|ref|ZP_02367096.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
C6786]
Length = 163
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ F + L AR LK+
Sbjct: 9 FAFGRQALDVRTYRQELLSSNIANADTPGYRARDV-DFSSTL------ARA----LKQ-- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
G + + PL Q GV SG ++ T+ + +G++K +
Sbjct: 56 -DGARSAGNAAQLPLAQPAGV-TSGMSMATTSGSHMAGNVKLI 96
>gi|126441479|ref|YP_001057319.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
668]
gi|126220972|gb|ABN84478.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
668]
Length = 163
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ F + L AR LK+ D
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTL------ARA----LKQ-D 56
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ NA + PL Q GV SG ++ T+ + +G++K +
Sbjct: 57 GAASAGNAAQL--PLAQPAGV-ASGMSMATTSGAHLAGNVKLI 96
>gi|308186390|ref|YP_003930521.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
gi|308056900|gb|ADO09072.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
Length = 137
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + +
Sbjct: 9 LKFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASELSRVMSNGRAEGSSMALKV 67
Query: 67 SSGLHWNAHVIEAP-LDQTTGV----QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A AP +D + GNTV + E + Y+ + LI
Sbjct: 68 TSARHIEAQTNGAPSMDMLYRIPDQPAADGNTVDMDRERTQFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMSVLQG 136
>gi|221233941|ref|YP_002516377.1| flagellar basal body rod protein FlgB [Caulobacter crescentus
NA1000]
gi|220963113|gb|ACL94469.1| flagellar basal-body rod protein FlgB [Caulobacter crescentus
NA1000]
Length = 147
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
I F + +L+ERQK+V++N+AN+ TP YR D+ F
Sbjct: 6 IPLFGMLKSRLGYLTERQKLVAQNVANSDTPGYRPSDLKPF 46
>gi|328543165|ref|YP_004303274.1| flagellar basal-body rod protein B [polymorphum gilvum
SL003B-26A1]
gi|326412911|gb|ADZ69974.1| Flagellar basal-body rod protein B [Polymorphum gilvum
SL003B-26A1]
Length = 133
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE-----TILNQNFLMARTH 58
+ FQ W RQ ++SEN+ANA +P YRA+D+ F+ + ART
Sbjct: 6 LPMFQALKSKMQWHQTRQSLLSENVANADSPQYRARDLKPFDLSKQVDLKPAGLATARTQ 65
Query: 59 ETHL 62
HL
Sbjct: 66 AGHL 69
>gi|321315384|ref|YP_004207671.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
gi|320021658|gb|ADV96644.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
Length = 129
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ NIAN TPNY+AK + SF+ +L+Q T +T + D S N ++ +
Sbjct: 21 KQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLETIKTDYRHVDFSDTDSNYSIVAS 79
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V + E+
Sbjct: 80 G---DTSYQQNGNNVDVDKEM 97
>gi|218530782|ref|YP_002421598.1| flagellar basal body rod protein FlgB [Methylobacterium
chloromethanicum CM4]
gi|254561751|ref|YP_003068846.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
DM4]
gi|218523085|gb|ACK83670.1| flagellar basal body rod protein FlgB [Methylobacterium
chloromethanicum CM4]
gi|254269029|emb|CAX24990.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
DM4]
Length = 138
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDIS-------SFETILNQNF---LMARTHETHLKES 65
W RQ +++EN+ANA P +R +D++ T + + +ART TH+ +
Sbjct: 18 WHQARQALLAENVANADMPGFRPRDLAEPSAASMKLATPVAASVGGDGIARTDSTHIGMT 77
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S+G + + + V+ SGN V + E+ K+G + Y+L L +K
Sbjct: 78 ASAGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQADYQLVASLYQK 126
>gi|162147438|ref|YP_001601899.1| flagellar basal-body rod protein flgB [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786015|emb|CAP55597.1| putative flagellar basal-body rod protein flgB [Gluconacetobacter
diazotrophicus PAl 5]
Length = 139
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
+A +WL R+ +++ N+ANA+TP Y KD++ F+ +L + M A+T H+
Sbjct: 17 LLGLAKDRLHWLEARESVLAGNVANANTPGYVPKDMTPFQGVLQEQMGMTLAQTEPGHM 75
>gi|190574266|ref|YP_001972111.1| flagellar basal body rod protein FlgB [Stenotrophomonas maltophilia
K279a]
gi|254523965|ref|ZP_05136020.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp. SKA14]
gi|190012188|emb|CAQ45811.1| putative flagellar basal-body rod protein FlgB [Stenotrophomonas
maltophilia K279a]
gi|219721556|gb|EED40081.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp. SKA14]
Length = 131
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHE 59
+ + +Q +R K+++ N+ NA TP Y+A+D+ F+ L + N LMA THE
Sbjct: 8 YLGVHAQAMPLREQRMKLIASNLGNADTPGYKAQDL-DFDAALRHAQGQDANGLMATTHE 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLI 117
H + SSGL+ E GVQ S GNTV E G Y + +
Sbjct: 67 QHYEI--SSGLNPFQIARE-------GVQPSLDGNTVDPDAERAAYGRAALEYRASLSFV 117
Query: 118 K-KLNSMVMHV 127
+ K+ SM+ +
Sbjct: 118 ESKVRSMLTAI 128
>gi|254487293|ref|ZP_05100498.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101]
gi|214044162|gb|EEB84800.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101]
Length = 115
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV-- 76
+RQ I S+N+AN+ TP Y AKDI++FET L + + ++ + +G H N V
Sbjct: 7 QRQAIASQNVANSDTPGYVAKDIAAFET------LYQSSRDGTVQRATRTG-HLNGSVDG 59
Query: 77 --IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ P + +GN V + E+ +S K ++ + + K S++ +
Sbjct: 60 MQVTEPFEVRDEASPNGNAVSLETEMLRSLDAKRQHDRSLAIYKSALSVLRSTI 113
>gi|53717911|ref|YP_106897.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
K96243]
gi|76809258|ref|YP_331876.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
1710b]
gi|134283584|ref|ZP_01770283.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
gi|167717657|ref|ZP_02400893.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
DM98]
gi|167736700|ref|ZP_02409474.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
14]
gi|167843905|ref|ZP_02469413.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
B7210]
gi|167909124|ref|ZP_02496215.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
112]
gi|254262000|ref|ZP_04953054.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1710a]
gi|254295811|ref|ZP_04963268.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
406e]
gi|52208325|emb|CAH34258.1| putative flagellar basal-body rod protein [Burkholderia
pseudomallei K96243]
gi|76578711|gb|ABA48186.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1710b]
gi|134244993|gb|EBA45088.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
gi|157805665|gb|EDO82835.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
406e]
gi|254220689|gb|EET10073.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1710a]
Length = 163
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ F + L AR LK+ D
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTL------ARA----LKQ-D 56
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ NA + PL Q GV SG ++ T+ + +G++K +
Sbjct: 57 GAASAGNAAQL--PLAQPAGV-ASGMSMATTSGAHLAGNVKLI 96
>gi|114762159|ref|ZP_01441627.1| hypothetical protein 1100011001331_R2601_14510 [Pelagibaca
bermudensis HTCC2601]
gi|114545183|gb|EAU48186.1| hypothetical protein R2601_14510 [Roseovarius sp. HTCC2601]
Length = 125
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-THE 59
Q + FQ A A RQ + ++NIANA TP Y A DI FE L + R T +
Sbjct: 2 FQNLNVFQTAMALAKHSGLRQALSAQNIANADTPGYHALDIPDFEATLRGSEGSQRATRD 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
HL GL + H+ E L + + V +GN+V I E+
Sbjct: 62 KHLH-----GLRQD-HLPEPTLRRAS-VDPNGNSVSIEGEM 95
>gi|317052364|ref|YP_004113480.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
S5]
gi|316947448|gb|ADU66924.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
S5]
Length = 141
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 20/123 (16%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFL----------MARTHETHLKESDS 67
S+ Q +++ N+ANA TPNY+AK++ FE L + L MARTHE+HL
Sbjct: 23 SKNQDVIATNVANAETPNYKAKEL-VFEDQLREAVLGRKEDKEMIPMARTHESHLPTGAK 81
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT----KLIKKLNSM 123
L V+ GN V + E+ + +Y+ +T K I+ L S
Sbjct: 82 PAFMPYMQ-----LQHNQTVRNDGNDVELEKEIGRMMENATMYQASTTIAAKKIEGLKSA 136
Query: 124 VMH 126
+M
Sbjct: 137 IME 139
>gi|157371210|ref|YP_001479199.1| flagellar basal body rod protein FlgB [Serratia proteamaculans 568]
gi|157322974|gb|ABV42071.1| flagellar basal-body rod protein FlgB [Serratia proteamaculans 568]
Length = 137
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F LN+ R + + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFAGQLNKVLEQGRVSGSGIALNMTSARHIPA 75
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYEL 112
++ P LD V + GNTV + E + +KY +L
Sbjct: 76 QNMQPPQLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDL 120
>gi|329890583|ref|ZP_08268926.1| flagellar basal body rod protein FlgB [Brevundimonas diminuta ATCC
11568]
gi|328845884|gb|EGF95448.1| flagellar basal body rod protein FlgB [Brevundimonas diminuta ATCC
11568]
Length = 134
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQ--NFLMARTHETHLKESDSSG 69
WL +RQ+++++N+AN+ TP Y A+D+ + F + M T+ H+ G
Sbjct: 17 GWLDDRQRVIAQNVANSDTPGYVARDLKTPTDFAEAMRTGGGLRMTTTNARHIS---PPG 73
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
AP +TT + GN+V + ++ K + Y+ +K M+
Sbjct: 74 QAARFEATRAPDSETT---LDGNSVVVEEQMLKMAESRMAYDAAIGFYQKSMQMI 125
>gi|254470270|ref|ZP_05083674.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062]
gi|211960581|gb|EEA95777.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062]
Length = 127
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILN 49
FQ Q W +RQ +++EN+ANA TP YR+KD+ SF +++
Sbjct: 1 MFQALRQKMQWHQQRQGVLAENVANADTPGYRSKDLKELSFSDMVD 46
>gi|296274028|ref|YP_003656659.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM
7299]
gi|296098202|gb|ADG94152.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM
7299]
Length = 135
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMA 55
M+P ++ ++ +ERQK++S NIAN +TP+Y+ KD+ SFE+ L + + +
Sbjct: 1 MKPSNVSELLFNTLSYRAERQKVISSNIANINTPDYKTKDL-SFESQLQEKNRQKDLQLI 59
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
T++ H+K +++ + V E + Q GN V + ++
Sbjct: 60 TTNQNHIKSKENNDKNPRMEVYEV---ENLQEQNDGNNVNLDTQM 101
>gi|319787124|ref|YP_004146599.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas suwonensis
11-1]
gi|317465636|gb|ADV27368.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas suwonensis
11-1]
Length = 139
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 1 MQPITFFQIASQHANWLS---ERQKIVSENIANASTPNYRAKDI-----------SSFET 46
+ PI+ + HA+ L +R K+++ N+ANA TP Y+A+D+ S
Sbjct: 2 LNPISSYM--GVHADALPLREQRMKLIASNLANADTPGYKAQDLDFNAALDAATRSRTGG 59
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD---QTTGVQVSGNTVGITNELYKS 103
+ N + A THE+HL+++ ++GL AP Q + + GNTV E
Sbjct: 60 VANGPGVPAATHESHLQDAIATGL--------APFQYTRQASQPSLDGNTVDADVERAAY 111
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVRG 130
G Y + ++ ++ + G
Sbjct: 112 GRAALEYRASLSFVEGKVRTLLTAITG 138
>gi|283833633|ref|ZP_06353374.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
29220]
gi|291071316|gb|EFE09425.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
29220]
Length = 138
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+D+ F + L + + R + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDL-DFASELKKVMVRGREQTGGVSLTLTSAQHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ P DQ + + GNTV + E + +KY L T L ++ M
Sbjct: 76 QTVSTPSTELLYRIPDQPS---LDGNTVDMDRERTQFADNSLKYQMGL-TALGGQIKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|167645331|ref|YP_001682994.1| flagellar basal body rod protein FlgB [Caulobacter sp. K31]
gi|167347761|gb|ABZ70496.1| flagellar basal-body rod protein FlgB, putative [Caulobacter sp.
K31]
Length = 139
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 26/135 (19%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISS--FETILNQ------------------NFLM 54
+LS+RQK++++N+ANA TP Y+ +D+ + F+ L+Q M
Sbjct: 7 GYLSDRQKVIAQNVANADTPEYQPRDLKAYTFKATLDQQTTGQPYRGGPVSPTATNGVQM 66
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T +H+ + + W A E P +TT + GN+V + +++ K + Y+
Sbjct: 67 MATSASHMAPARPAS-AWRAP--EGPDSETT---LDGNSVTLEDQMLKMTDARMNYDAAV 120
Query: 115 KLIKKLNSMVMHVVR 129
+K +++ R
Sbjct: 121 SFYQKSMALLKTSTR 135
>gi|237810458|ref|YP_002894909.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
MSHR346]
gi|237506387|gb|ACQ98705.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
MSHR346]
Length = 163
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ F + L AR LK+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTL------ARA----LKQ-- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
G + + PL Q GV SG ++ T+ + +G++K +
Sbjct: 56 -DGATSAGNAAQLPLAQPAGV-ASGMSMATTSGAHLAGNVKLI 96
>gi|254251188|ref|ZP_04944506.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
gi|124893797|gb|EAY67677.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
Length = 173
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ T+ AR+ LK+++
Sbjct: 19 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFASTL-------ARS----LKQAN 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
NA + P+ Q GV SG T+ T + +G +K +
Sbjct: 68 GGLAPSNA--AQLPMTQPAGV-TSGMTMASTAPGHMAGTVKLI 107
>gi|283784869|ref|YP_003364734.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium
ICC168]
gi|282948323|emb|CBG87906.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium
ICC168]
Length = 138
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+++DI F + L + + R + + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQSRDI-DFASELKKVMVRGRQETGGISLALTSAQHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+P DQ + + GNTV + E + +KY L T L ++ M
Sbjct: 76 QAFSSPSTELLYRVPDQPS---LDGNTVDMDRERTQFADNSLKYQMSL-TALGGQIKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|89098647|ref|ZP_01171529.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
gi|89086609|gb|EAR65728.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
Length = 135
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
N S +QK+V++NIANA TPNY+AKD+ SF+++L
Sbjct: 19 NQASLKQKVVAQNIANADTPNYKAKDV-SFKSVL 51
>gi|205373368|ref|ZP_03226172.1| flagellar basal body rod protein FlgB [Bacillus coahuilensis m4-4]
Length = 133
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKESDSSGLH 71
N+ +++QK +S+NIAN TPNY+AKD+ FE+ ++ + T + H+ +S
Sbjct: 17 NYSTDKQKAISQNIANVDTPNYKAKDV-KFESYFKKSVADIQANVTSDKHMSFKPTSATG 75
Query: 72 WNAHVIEAPLDQTTGV-QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN---SMVMHV 127
+A AP + + +GN V + E+ + Y LI++LN SM+ V
Sbjct: 76 TSA----APYSSSDFIYHHNGNGVDVDKEMADLATNQIYYN---SLIQQLNHKYSMITTV 128
Query: 128 VRG 130
V+G
Sbjct: 129 VKG 131
>gi|50120636|ref|YP_049803.1| flagellar basal body rod protein FlgB [Pectobacterium atrosepticum
SCRI1043]
gi|49611162|emb|CAG74608.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
SCRI1043]
Length = 138
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKTTSVRHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKY 108
+ P LD V + GNTV + E + +KY
Sbjct: 76 QSFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKY 116
>gi|260574406|ref|ZP_05842410.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
gi|259023302|gb|EEW26594.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
Length = 126
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 20 RQKIVSENIANASTPNYRAKDISSF-ETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
RQ++++ N+ANA TP ++A+D+ F ET M T H+ D + L
Sbjct: 21 RQEVIARNVANADTPGFKAQDLPDFAETYQAGEGAMRATRPGHITAPDLASL-------- 72
Query: 79 APLDQTTGVQVS--GNTVGITNELYKSGHIKYLYEL 112
P+ +T S GNTV + +E+ K+ ++ +++
Sbjct: 73 -PVPRTANGSASPNGNTVSLESEMVKAVEVRQQHDM 107
>gi|156934443|ref|YP_001438359.1| flagellar basal body rod protein FlgB [Cronobacter sakazakii ATCC
BAA-894]
gi|260597442|ref|YP_003210013.1| flagellar basal body rod protein FlgB [Cronobacter turicensis
z3032]
gi|156532697|gb|ABU77523.1| hypothetical protein ESA_02274 [Cronobacter sakazakii ATCC BAA-894]
gi|260216619|emb|CBA29911.1| Flagellar basal-body rod protein flgB [Cronobacter turicensis
z3032]
Length = 137
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQN------FLMARTHETHLKES 65
N ++RQ+I++ NIANA TP Y+A+DI S + +++Q +A T H+
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDIDFASQLKKVMDQGRASGSTMTLAMTSSRHIPAQ 76
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKYLYEL 112
S+G + + P DQ + + GNTV + E + +KY +L
Sbjct: 77 ASTGASLDL-LYRVP-DQPS---MDGNTVDMDRERTQFADNSLKYQTDL 120
>gi|209964218|ref|YP_002297133.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
gi|209957684|gb|ACI98320.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
Length = 135
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 31/42 (73%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE 45
I F++ S+ W S+RQ ++++N+AN+ TP+Y+ +D+ +F+
Sbjct: 6 IGLFKLISEKMAWHSQRQGVLAQNVANSDTPDYKPQDLVAFD 47
>gi|322832561|ref|YP_004212588.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
gi|321167762|gb|ADW73461.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
Length = 136
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
Q + N ++RQ+I+S NIANA TP Y+A+DI F + L + R + + S
Sbjct: 9 LQFQQEALNLRAQRQEILSANIANADTPGYQARDI-DFASQLQKVMEQGRASGSGISLSL 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQV------SGNTVGITNEL--YKSGHIKYLYELNTKLIK 118
+S H A ++ P D ++ GNTV + E + ++Y +L T L
Sbjct: 68 TSDRHIPASNVQ-PADMDLMYRIPDQPSADGNTVDMDRERTNFADNSVRYQTDL-TVLGG 125
Query: 119 KLNSMVMHVVRG 130
++ M M V++G
Sbjct: 126 QIKGM-MSVLQG 136
>gi|242238966|ref|YP_002987147.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
gi|242131023|gb|ACS85325.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
Length = 137
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + N ++RQ+I++ NIANA TP Y+A+DI F L + RT E+ L +
Sbjct: 9 FRFMQEALNLRAQRQEILAGNIANADTPGYQARDI-DFANELKKAMKQGRTSESSLSLTT 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+S H ++VSG + N LY+
Sbjct: 68 TSVRH---------------IEVSGESFPDLNLLYR 88
>gi|167835108|ref|ZP_02461991.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
MSMB43]
Length = 163
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ F + L AR LK+ D
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTL------ARA----LKQ-D 56
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ N + PL Q GV SG ++ T+ + +G++K +
Sbjct: 57 GAASAGNGATL--PLAQPAGV-TSGMSMAATSGAHLAGNVKLI 96
>gi|329901227|ref|ZP_08272752.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
IMCC9480]
gi|327549159|gb|EGF33751.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
IMCC9480]
Length = 150
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 22/136 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFL---------------MAR 56
N +RQ++++ NIANA TPNY+A+DI S+ ++ L ++ +AR
Sbjct: 17 NLRGQRQQLIASNIANADTPNYKARDIDFNSAMKSALARSGTATGATMATAAVQPAELAR 76
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYELNT 114
T THL S SG N+ V PL Q V GNTV + E YE
Sbjct: 77 TSTTHL--SAKSGHGGNSGVNGVPLLYRNIQQGAVDGNTVDMDAERNAFADNAIRYEAGI 134
Query: 115 KLIKKLNSMVMHVVRG 130
+I ++ ++G
Sbjct: 135 TMISGQIKSMLSAIQG 150
>gi|261419416|ref|YP_003253098.1| flagellar basal body rod protein FlgB [Geobacillus sp. Y412MC61]
gi|319766231|ref|YP_004131732.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
gi|261375873|gb|ACX78616.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC61]
gi|317111097|gb|ADU93589.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
Length = 129
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESDSSG 69
Q + + RQ+ +++NIANA TP Y+AKD+ F++ L + F + RT+ H +
Sbjct: 13 QGLRYAALRQQAIADNIANADTPGYKAKDV-RFQSELERAFRLEAKRTNPKHFSFPNEQ- 70
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN---SMVMH 126
N +I D T +GN+V I E+ K + Y LI++LN + +
Sbjct: 71 ---NGKII-VTTDTTVSYNHNGNSVDIDQEMSKLAENQIYY---NALIERLNGKFTTLKT 123
Query: 127 VVRG 130
V++G
Sbjct: 124 VIKG 127
>gi|56460255|ref|YP_155536.1| flagellar basal body protein [Idiomarina loihiensis L2TR]
gi|56179265|gb|AAV81987.1| Flagellar basal body protein [Idiomarina loihiensis L2TR]
Length = 134
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLK-ESDSSGL 70
++R ++++ NIANA TP Y+AK + F+ L Q N MARTHE H E G
Sbjct: 20 TQRAELIANNIANADTPGYKAKGL-DFQQALQQAQRGMENHKMARTHEQHFSVEVKPQG- 77
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELN 113
P TG GNTV + E LY ++Y +N
Sbjct: 78 ---TEKFRTPSQPDTG---DGNTVDVQLEQNLYAQNALEYEMTMN 116
>gi|238919256|ref|YP_002932771.1| flagellar basal body rod protein FlgB [Edwardsiella ictaluri
93-146]
gi|238868825|gb|ACR68536.1| flagellar basal-body rod protein FlgB, putative [Edwardsiella
ictaluri 93-146]
Length = 137
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + + +
Sbjct: 9 FRFQQDALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSRVLENGRPDGSGIALTL 67
Query: 67 SSGLHWNAHVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYELNTKLIKK 119
+S H A ++ P LD V + GNTV + E + ++Y +L T L +
Sbjct: 68 TSARHIPAQNVQPPSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDL-TVLSGQ 126
Query: 120 LNSMVMHVVRG 130
+ +M+ + +G
Sbjct: 127 IKNMMAVLQQG 137
>gi|163852028|ref|YP_001640071.1| flagellar basal body rod protein FlgB [Methylobacterium extorquens
PA1]
gi|163663633|gb|ABY31000.1| putative flagellar basal-body rod protein [Methylobacterium
extorquens PA1]
Length = 138
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDIS-------SFETILNQNF---LMARTHETHLKES 65
W RQ +++EN+ANA P +R +D++ T + + +ART TH+ +
Sbjct: 18 WHQARQALLAENVANADMPGFRPRDLAEPSAASMKLATPVAASVGGDGLARTDSTHIGMT 77
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S G + + + V+ SGN V + E+ K+G + Y+L L +K
Sbjct: 78 ASVGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQADYQLVASLYQK 126
>gi|317492431|ref|ZP_07950860.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919770|gb|EFV41100.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 149
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP ++A+DI F + L + R + + ++ +S H A
Sbjct: 29 NLRAQRQEILAANIANADTPGFQARDI-DFSSQLTRAIEQGRVNGSGVELKTTSSRHIPA 87
Query: 75 HVIEAP-LDQTTGV----QVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ P LD V + GNTV + E + ++Y +L T + ++ SM+ +
Sbjct: 88 QSFQPPELDMLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDL-TVISGQIKSMMSVL 146
Query: 128 VRG 130
+G
Sbjct: 147 QQG 149
>gi|329297213|ref|ZP_08254549.1| flagellar basal body rod protein FlgB [Plautia stali symbiont]
Length = 137
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + L +
Sbjct: 9 LRFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASQLSKAMQNGRAEGSSLALNV 67
Query: 67 SSGLHWNAHVIEAPL--------DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+S H A P DQ GNTV + E + Y+ + LI
Sbjct: 68 TSSRHIEAQTNSQPALDLLYRIPDQPA---ADGNTVDMDRERTQFADNSLKYQTDLTLIS 124
Query: 119 KLNSMVMHVVRG 130
+M V+ G
Sbjct: 125 SQIKGMMSVLLG 136
>gi|52080220|ref|YP_079011.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
14580]
gi|52785597|ref|YP_091426.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
14580]
gi|319646001|ref|ZP_08000231.1| FlgB protein [Bacillus sp. BT1B_CT2]
gi|52003431|gb|AAU23373.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
14580]
gi|52348099|gb|AAU40733.1| FlgB [Bacillus licheniformis ATCC 14580]
gi|317391751|gb|EFV72548.1| FlgB protein [Bacillus sp. BT1B_CT2]
Length = 129
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ N+AN TPNY+AK + SF+ +LN+ +T + D G N V+
Sbjct: 21 KQKVITNNLANVDTPNYKAKKV-SFKNVLNEESSRINAIKTDYRHIDFKGNEPNYSVVSR 79
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSMVMHVVRG 130
+ T Q +GN V + E+ + + Y+ L ++ K NS+ + G
Sbjct: 80 ---KNTTYQENGNNVDVDQEMSEMAKNQIQYQALVERISGKFNSLRTAITGG 128
>gi|289208111|ref|YP_003460177.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
K90mix]
gi|288943742|gb|ADC71441.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
K90mix]
Length = 136
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHL 62
I + N ++R ++++ NIANA TPNY+A+DI F ++L N MA TH+ H+
Sbjct: 11 ILPEAVNVRAKRMELLASNIANADTPNYKARDI-DFRSVLQAAAGEGGNMPMASTHQGHI 69
>gi|261821150|ref|YP_003259256.1| flagellar basal body rod protein FlgB [Pectobacterium wasabiae
WPP163]
gi|261605163|gb|ACX87649.1| flagellar basal-body rod protein FlgB [Pectobacterium wasabiae
WPP163]
Length = 138
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKTTSVRHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKY 108
+ P LD V + GNTV + E + +KY
Sbjct: 76 QNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKY 116
>gi|163781739|ref|ZP_02176739.1| flagellar basal body rod protein FlgB [Hydrogenivirga sp.
128-5-R1-1]
gi|159882959|gb|EDP76463.1| flagellar basal body rod protein FlgB [Hydrogenivirga sp.
128-5-R1-1]
Length = 124
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+R K++ NIANA TPNYRAKD+ + + + T H+K S G V+E
Sbjct: 19 KRHKVILSNIANADTPNYRAKDLQFKDEV--DRIPLKTTSRKHIKPSGGEGF----KVVE 72
Query: 79 APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ V N V + E+ K + YE+ K+I + + +++RG
Sbjct: 73 V---KRNLVGNDRNNVSVEEEMAKLTQNRIAYEVYMKMISGNINKLNNIIRG 121
>gi|253688975|ref|YP_003018165.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755553|gb|ACT13629.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 138
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKTTSVRHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKY 108
+ P LD V + GNTV + E + +KY
Sbjct: 76 QNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKY 116
>gi|127512276|ref|YP_001093473.1| flagellar basal body rod protein FlgB [Shewanella loihica PV-4]
gi|126637571|gb|ABO23214.1| flagellar basal-body rod protein FlgB [Shewanella loihica PV-4]
Length = 132
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSSGLH 71
S R +++S NIANA TP+Y+AKD+ F+ L M+R++E H + S H
Sbjct: 20 SARAEVISSNIANADTPHYKAKDL-DFDKALQAARTAQSGLAMSRSNEKHFDLAALSQQH 78
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ V P TG GNTV I E
Sbjct: 79 ISYRVPNQP---DTG---DGNTVDIQQE 100
>gi|227112518|ref|ZP_03826174.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|227328335|ref|ZP_03832359.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 138
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T + +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKTTSVRHIPA 75
Query: 75 HVIEAP-LDQTTGVQ----VSGNTVGITNEL--YKSGHIKY 108
+ P LD V + GNTV + E + +KY
Sbjct: 76 QNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKY 116
>gi|209884535|ref|YP_002288392.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
gi|209872731|gb|ACI92527.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
Length = 132
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 28/120 (23%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-------MARTHETHLKE---S 65
W ERQ+I++EN++N+ TPN+R +++ E ++ + M RT H++ S
Sbjct: 18 WHQERQRILAENVSNSDTPNFRPREL--VEPTFDKTGISGMRELSMVRTSANHIQAAGVS 75
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK--SGHIKY-----LYELNTKLIK 118
++ G H N P +GN V I +E+ K S + Y LY + LIK
Sbjct: 76 EAFGSHTNGGYETRP---------AGNAVNIEDEMLKVASNQMDYAAAASLYSKSLDLIK 126
>gi|56419751|ref|YP_147069.1| flagellar basal body rod protein FlgB [Geobacillus kaustophilus
HTA426]
gi|297530609|ref|YP_003671884.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
gi|56379593|dbj|BAD75501.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
gi|297253861|gb|ADI27307.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
Length = 129
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESDSSG 69
Q + + RQ+ +++NIANA TP Y+AKD+ F+ L + F + RT+ H +
Sbjct: 13 QGLRYAALRQQAIADNIANADTPGYKAKDV-RFQAELERAFRLEAKRTNPKHFSFPNEQ- 70
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN---SMVMH 126
N +I D T +GN+V I E+ K + Y LI++LN + +
Sbjct: 71 ---NGKII-VTTDTTVSYNHNGNSVDIDQEMSKLAENQIYY---NALIERLNGKFTTLKT 123
Query: 127 VVRG 130
V++G
Sbjct: 124 VIKG 127
>gi|89069823|ref|ZP_01157158.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus
HTCC2516]
gi|89044624|gb|EAR50740.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus
HTCC2516]
Length = 122
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ Q ++ A S RQ +V+ NIANA TP YRA+ + F + +A+T H
Sbjct: 5 LDVMQTSAAMARHASARQVLVARNIANADTPGYRAQSLPPFREVAGTGRALAQTRAGHFG 64
Query: 64 ES 65
S
Sbjct: 65 GS 66
>gi|330860609|emb|CBX70906.1| flagellar basal-body rod protein flgB [Yersinia enterocolitica
W22703]
Length = 96
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++RQ+I+S NIANA TP ++A+DI F + L + R T + S +S H A +
Sbjct: 3 AQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRASGTGVSLSLTSARHIPASTV 61
Query: 78 EAP--------LDQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 62 QPPDLDLLFRVPDQPS---MDGNTVDMDRE 88
>gi|258511108|ref|YP_003184542.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477834|gb|ACV58153.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 134
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+T F++ + + RQ + + NIANA TP Y+ +D+ +FET+L QN L + L
Sbjct: 1 MTVFELLQNALDASTLRQAVYANNIANAETPGYKRQDV-AFETLL-QNALSGQAS-GALG 57
Query: 64 ES------DSSGLHWNAHVIEAPL---DQTTGVQVSGNTVGITNE--LYKSGHIKY 108
E+ D+ NA P+ D +T V +GN V IT E L ++Y
Sbjct: 58 EAQIPIGGDAPSYDLNALPDVTPVVYTDPSTTVNSNGNNVDITEEMVLLAENQVRY 113
>gi|292487936|ref|YP_003530811.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430]
gi|292899155|ref|YP_003538524.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
49946]
gi|291199003|emb|CBJ46114.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
49946]
gi|291553358|emb|CBA20403.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430]
gi|312172057|emb|CBX80314.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
BAA-2158]
Length = 137
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEILASNIANADTPGYQARDI-DFASQLTKAVEHGRAQGSAMSLAVTSARHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
P DQ + + GNTV + E + Y+ + LI +M
Sbjct: 76 ETQRPPSMDLMYRIPDQPS---LDGNTVDMDRERTEFADNSLRYQTDLTLISSQIKGMMS 132
Query: 127 VVRG 130
++G
Sbjct: 133 ALQG 136
>gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
Length = 130
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART-HETHLKESDSSGLHWNAHV 76
++R + VSENIANA TP YR K +S T A T HL +S ++ +H
Sbjct: 19 AQRLQHVSENIANADTPGYRRKTVSFEATHAGTGTAGAVTVSRVHLDQSAPQRIYDPSH- 77
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL---IKKLNSMVMHVVR 129
PL TG G+TV + E+ + + YE N K+ ++++++ +M ++R
Sbjct: 78 ---PLADETG-HYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQMSAGLMDLLR 129
>gi|253998491|ref|YP_003050554.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
gi|313200566|ref|YP_004039224.1| flagellar basal-body rod protein flgb [Methylovorus sp. MP688]
gi|253985170|gb|ACT50027.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
gi|312439882|gb|ADQ83988.1| flagellar basal-body rod protein FlgB [Methylovorus sp. MP688]
Length = 142
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 22/125 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++RQ++++ NIANA TPNY+A+DI +F LN T + L S +S H +
Sbjct: 19 AQRQELIAANIANADTPNYKARDI-NFNDALNNALSGNDTPGSGLDVSKTSSAHLSGDPT 77
Query: 78 EA--------------PLDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELN--TKLIKK 119
PL Q + V GNTV + E + I+Y LN IKK
Sbjct: 78 SVDYVPTGKPGEPMFRPLIQGS---VDGNTVDMDVERNQFTDNAIRYEASLNMINGQIKK 134
Query: 120 LNSMV 124
L S +
Sbjct: 135 LLSAI 139
>gi|225850274|ref|YP_002730508.1| flagellar basal-body rod protein FlgB [Persephonella marina
EX-H1]
gi|225646074|gb|ACO04260.1| flagellar basal-body rod protein FlgB [Persephonella marina
EX-H1]
Length = 125
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
+ A++ ER K++ NIANA TP Y+ KD+ FE +L + + +T H+
Sbjct: 13 EKASYFLERTKVIQSNIANADTPFYKPKDL-VFEKVLTEQIKLKKTDPKHI 62
>gi|157961168|ref|YP_001501202.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
700345]
gi|157846168|gb|ABV86667.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
700345]
Length = 132
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S+R +I+S NIANA TP Y+A+D+ F +N A++ +T L + S H++ +
Sbjct: 20 SQRAEILSSNIANADTPGYKARDV-DFSKAMN----AAQSQQTGLAMAKSDSKHFDMAAL 74
Query: 78 -------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P TG GNTV I E Y+++ + S + +RG
Sbjct: 75 TQQHLGYRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSGMKKAIRG 131
>gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis
HTCC2601]
gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601]
Length = 130
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLM-ARTHETHLKESDSSGLHWNAHV 76
++R ++VSENIAN TP YR K + FE + + + +T L SD + W+ H
Sbjct: 19 ADRLRVVSENIANVDTPGYRRKTL-PFELGEGSDGVREVQAGDTRLDRSDLERI-WDPH- 75
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL G G V + EL + + YE N K+ ++++S +M ++R
Sbjct: 76 --HPLADPAGF-YDGTNVDLIVELADAREAQRSYEANLKMFEQTRQMSSSLMDLLR 128
>gi|302878273|ref|YP_003846837.1| flagellar basal-body rod protein FlgB [Gallionella
capsiferriformans ES-2]
gi|302581062|gb|ADL55073.1| flagellar basal-body rod protein FlgB [Gallionella
capsiferriformans ES-2]
Length = 134
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA--HVI 77
RQ++++ NIANA TP Y+A+DI +F + L QN L + + + S + L NA ++
Sbjct: 22 RQELLASNIANADTPGYKARDI-NFASAL-QNALAGTSVKLPMATSSAMHLEGNAGGQIM 79
Query: 78 EAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLI-KKLNSMV 124
AP+ Q S GNTV + E + YE + K KL M+
Sbjct: 80 GAPVQYRRPDQPSADGNTVNMDVERAQFADNALRYEASVKFTGDKLKDML 129
>gi|51598554|ref|YP_072742.1| flagellar basal body rod protein FlgB [Borrelia garinii PBi]
gi|51573125|gb|AAU07150.1| flagellar basal-body rod protein [Borrelia garinii PBi]
Length = 135
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL ++ L K SD S
Sbjct: 13 RYLDVLSLRQGVISDNIANVDTPNFKRSRI-SFESELEKAFLNKGKNDLSLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
GL + P LD + + +GN V I +E+ + +Y L T +
Sbjct: 72 GLKNPEYSDVKPHRVLDHFSTMNNNGNNVDIDSEIKALVQNQMMYHLMTNI 122
>gi|299131776|ref|ZP_07024971.1| flagellar basal body rod protein FlgB [Afipia sp. 1NLS2]
gi|298591913|gb|EFI52113.1| flagellar basal body rod protein FlgB [Afipia sp. 1NLS2]
Length = 131
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI--SSFE-TILN--QNFLMARTHETHLKESDSSGL 70
W ERQ++++EN++N+ TPN+R +D+ +F+ T +N M RT H++
Sbjct: 18 WHQERQRVLAENVSNSDTPNFRPRDLVEPTFDKTGINGMHEISMVRTSANHIQA------ 71
Query: 71 HWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKLIKK 119
A V E T G + +GN V I +E+ K + Y T L K
Sbjct: 72 ---AGVSETFGSNTGGYETRPAGNAVNIEDEMLKVASNQMDYAAATSLYTK 119
>gi|146311243|ref|YP_001176317.1| flagellar basal body rod protein FlgB [Enterobacter sp. 638]
gi|145318119|gb|ABP60266.1| flagellar basal-body rod protein FlgB [Enterobacter sp. 638]
Length = 138
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+D+ F + L + R T + + +S H A
Sbjct: 17 NLRAQRQEVLAGNIANADTPGYQARDM-DFSSELKKVMDRGRAEGTGVALALTSSRHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSM 123
+ AP DQ + + GNTV + E + +KY L T L ++ SM
Sbjct: 76 QAMTAPSTDLLYRIPDQPS---LDGNTVDMDRERTQFADNSLKYQTGL-TVLGGQIRSM 130
>gi|291277449|ref|YP_003517221.1| putative flagellar basal-body rod protein [Helicobacter mustelae
12198]
gi|290964643|emb|CBG40497.1| putative flagellar basal-body rod protein [Helicobacter mustelae
12198]
Length = 146
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------------NFLMARTHETHL 62
++ S RQ +++ NIAN TP YR KDI FE L Q MA+T + HL
Sbjct: 21 DYRSMRQDLIASNIANVDTPFYRPKDI-DFEHYLAQEKARIFDNKPHLELEMAQTSKNHL 79
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
K D+ + L + GN+V + E + G +Y+ T +KK
Sbjct: 80 KGGDTQSYRPTTFFRDGHL-----ARNDGNSVDLDVETSEMGKNSIMYQALTTALKKHRG 134
Query: 123 MVMHVV 128
+ + +
Sbjct: 135 IFTYAI 140
>gi|291484169|dbj|BAI85244.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
natto BEST195]
Length = 129
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ NIAN TPNY+AK + SF+ +L+Q +T + D S N ++ +
Sbjct: 21 KQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLEAIKTDYRHVDFSDADSNYSIVAS 79
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V + E+
Sbjct: 80 G---DTSYQQNGNNVDVDKEM 97
>gi|16078681|ref|NP_389500.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309493|ref|ZP_03591340.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313818|ref|ZP_03595623.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318742|ref|ZP_03600036.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323013|ref|ZP_03604307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. SMY]
gi|120292|sp|P24500|FLGB_BACSU RecName: Full=Flagellar basal-body rod protein flgB
gi|142915|gb|AAA22441.1| flgB [Bacillus subtilis]
gi|2633990|emb|CAB13491.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. subtilis str. 168]
Length = 129
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ NIAN TPNY+AK + SF+ +L+Q +T + D S N ++ +
Sbjct: 21 KQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLEAIKTDYRHVDFSDTDSNYSIVAS 79
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V + E+
Sbjct: 80 G---DTSYQQNGNNVDVDKEM 97
>gi|292669735|ref|ZP_06603161.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
43541]
gi|292648532|gb|EFF66504.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
43541]
Length = 140
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 31/127 (24%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------ARTH 58
I S+ S R +++S NIAN +TP +R + FE +L Q M RTH
Sbjct: 11 IDIGSRAMAAASLRHEVLSNNIANVNTPYFRRSHV-RFEDLLKQELGMDSDPLMKVVRTH 69
Query: 59 ETHLKESDSSGLHWNAH-VIEAPLDQTTGVQVSGNTVGIT--------NELYKS------ 103
+ HL + H A VIE D TT +++ GN V I N+LY S
Sbjct: 70 DRHL----PAAFHGKARAVIEQ--DATTNMRLDGNNVDIDIEMAEVAKNQLYYSALANAL 123
Query: 104 -GHIKYL 109
GHI L
Sbjct: 124 GGHINKL 130
>gi|220934391|ref|YP_002513290.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995701|gb|ACL72303.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
HL-EbGR7]
Length = 130
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 4 ITFFQIASQHANWL---SERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMAR 56
++F + HA+ L S R ++++ N+ANA TPNY+A+DI F L+Q + R
Sbjct: 3 LSFDKALGIHADALQLRSRRLELLASNLANADTPNYKARDI-DFRAALSQAQGGGVGLMR 61
Query: 57 THETHL 62
TH +HL
Sbjct: 62 THASHL 67
>gi|85706172|ref|ZP_01037267.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. 217]
gi|85669336|gb|EAQ24202.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. 217]
Length = 163
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
+ + F++A A RQ +VS+N+ANA TP+Y A+DI +F +++ +T TH
Sbjct: 37 EKLEIFRMAHAMARHAGARQAVVSQNMANADTPHYAARDIVAFA----ESYETDKT--TH 90
Query: 62 LKESDSSG-LHWNAHVI--EAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ + +G L H + + D T +GN+V + E+ ++ +K
Sbjct: 91 VSRATRTGHLLGQYHRLGFDVAEDPTAIKDPNGNSVSLETEMLRAVDVK 139
>gi|269836576|ref|YP_003318804.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus
DSM 20745]
gi|269785839|gb|ACZ37982.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus
DSM 20745]
Length = 138
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 12/70 (17%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NF 52
+ P F +Q + L+ RQ++ + N+ANA TP ++A + +FE L Q N
Sbjct: 6 IDPTRFL---AQALDGLALRQRVTANNVANADTPRFKASRV-TFEETLRQRLHDEPGGNL 61
Query: 53 LMARTHETHL 62
++ RTH +HL
Sbjct: 62 ILVRTHASHL 71
>gi|309779444|ref|ZP_07674205.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
gi|308921685|gb|EFP67321.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
Length = 151
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMART 57
F Q + S+R +I++ NIANA TPNY+A+D F++ L + + M+ T
Sbjct: 8 LFGFQEQALHLRSQRHQILASNIANADTPNYKARDF-DFQSALQKAVGQQGGNSLPMSAT 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGV-------------QVSGNTVGITNELYKSG 104
HL S + +++A L Q T + GNTV + E +
Sbjct: 67 AAGHL--SVDGAPAGDVSLMQASLSQQTKALQGEVQYRTSQQPSIDGNTVDMDGERMRFA 124
Query: 105 HIKYLYELNTKLI-KKLNSMVMHV 127
YE + ++ +K+ SM+ +
Sbjct: 125 DNTVRYEADLSIVTQKIKSMLAAI 148
>gi|307293790|ref|ZP_07573634.1| flagellar basal-body rod protein FlgB [Sphingobium chlorophenolicum
L-1]
gi|306879941|gb|EFN11158.1| flagellar basal-body rod protein FlgB [Sphingobium chlorophenolicum
L-1]
Length = 122
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 24/111 (21%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
F I + S+R +++ NIANASTP Y+A+DI E+ LKE+
Sbjct: 7 LFGIHGKALALRSQRLSLLASNIANASTPGYKARDID---------------FESALKEA 51
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQV------SGNTVGITNE--LYKSGHIKY 108
S A V +A +D + G +V GNTV ++ E L+ +KY
Sbjct: 52 TSRQGKSAADVSQA-VDDSMGYRVPLQSSLDGNTVELSTEQTLFAENAVKY 101
>gi|161526189|ref|YP_001581201.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
ATCC 17616]
gi|189349095|ref|YP_001944723.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
ATCC 17616]
gi|160343618|gb|ABX16704.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
ATCC 17616]
gi|189333117|dbj|BAG42187.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
17616]
Length = 162
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP YRA+D+ A T LK+++
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDVD-----------FASTLAHSLKQAN 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
NA + PL Q GV SG T+ T + +G +K +
Sbjct: 58 GGLAPSNAAQL--PLAQPAGV-TSGMTMVSTAPGHMAGTVKLI 97
>gi|224532015|ref|ZP_03672647.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
gi|224511480|gb|EEF81886.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
Length = 135
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN +TPN++ I SFE+ L + FL ++ +L K SD S
Sbjct: 13 RYLDVLSLRQSVISDNIANVNTPNFKRSKI-SFESELEKAFLNKNRNDLNLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
L ++ P LD + + +GN V I +E+ + +Y L T
Sbjct: 72 RLKNPEYLDIKPHRLLDHFSTMNNNGNNVDIDSEIKSLVQNQMMYHLMT 120
>gi|109899405|ref|YP_662660.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
atlantica T6c]
gi|109701686|gb|ABG41606.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
atlantica T6c]
Length = 133
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 8/52 (15%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS------SFETILNQNFLMARTHETHLK 63
+ER ++++ N+ANA+TP Y+A+DI+ S + NQN + RTHE H+K
Sbjct: 20 TERMEVLAGNLANANTPGYKARDINFQDAMRSAQNSRNQN--LTRTHENHIK 69
>gi|149912829|ref|ZP_01901363.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
gi|149813235|gb|EDM73061.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
Length = 129
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMART 57
Q + F+++ A RQ ++++N+AN+ TP Y A+D++ F T++ + F T
Sbjct: 2 FQNLDVFRLSHAMAVHAGTRQAVIAQNLANSDTPGYAARDVAPFSTLIGTDAPQFTSKAT 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
THL S S L I+ +GN+V + +E+ + +K ++ +
Sbjct: 62 RVTHLNAS-SGPLQ-----IDVSPRNDAQTDPNGNSVSVESEMLHAVSVKRQHDRAVAIY 115
Query: 118 K 118
K
Sbjct: 116 K 116
>gi|259908815|ref|YP_002649171.1| flagellar basal body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
gi|224964437|emb|CAX55946.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
gi|283478797|emb|CAY74713.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
12163]
gi|310767287|gb|ADP12237.1| flagellar basal body rod protein FlgB [Erwinia sp. Ejp617]
Length = 137
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEILASNIANADTPGYQARDI-DFASQLTKAVEHGRAQGSGMSLTVTSARHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ P DQ GNTV + E + Y+ + LI +M
Sbjct: 76 ETQQPPSMDLMYRIPDQPAS---DGNTVDMDRERTEFADNSLKYQTDLTLISSQIKGMMS 132
Query: 127 VVRG 130
++G
Sbjct: 133 ALQG 136
>gi|157146229|ref|YP_001453548.1| flagellar basal body rod protein FlgB [Citrobacter koseri ATCC
BAA-895]
gi|157083434|gb|ABV13112.1| hypothetical protein CKO_01986 [Citrobacter koseri ATCC BAA-895]
Length = 138
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+D+ F + L + + R + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDM-DFASELKKVMVRGREETGGIALKLTSAQHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+ +P DQ + + GNTV + E + +KY L T L ++ M
Sbjct: 76 QTVASPSVDLLYRIPDQPS---LDGNTVDMDRERTQFADNSLKYQTGL-TVLGGQIKGM- 130
Query: 125 MHVVRG 130
M+V++G
Sbjct: 131 MNVLQG 136
>gi|327480017|gb|AEA83327.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri DSM
4166]
Length = 134
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 8/54 (14%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMARTHETHL 62
+ S+R ++++ NIANA TPNY+A+D+ F ++L + F +ART E H+
Sbjct: 18 FRSQRAEVLANNIANADTPNYKARDL-DFSSVLAEQSARSQGGFGVARTSERHI 70
>gi|325918874|ref|ZP_08180951.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC
35937]
gi|325534911|gb|EGD06830.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC
35937]
Length = 133
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 13 HANWLS---ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLK 63
H + LS +R K+++ N++N TP Y+AKD+ +FE L LM T H +
Sbjct: 12 HGDALSLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGMQDGGLMQATDAKHYE 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNS 122
S+GL N I DQ + + GNTV E G Y + ++ K+ S
Sbjct: 71 VGGSAGL--NPFQITREADQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRS 125
Query: 123 MVMHVV 128
M+ +
Sbjct: 126 MLTAIT 131
>gi|82702450|ref|YP_412016.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
ATCC 25196]
gi|82410515|gb|ABB74624.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
ATCC 25196]
Length = 134
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETIL--NQNFLMARTHETH 61
F+ AN + RQ++++ NIANA TP Y+A+DI + E+ L + ++ + H
Sbjct: 9 FRFYEDAANLRAHRQQLIASNIANADTPQYKARDINFKDAMESALTGKRGVILVTSAPNH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ +G+ ++ T VQ V GNTV + E + YE N I
Sbjct: 69 IASPTGAGVAAGQQLL-----YRTAVQGSVDGNTVDMDVERNQFADNAVHYEANLTFI 121
>gi|326204629|ref|ZP_08194485.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
DSM 2782]
gi|325985196|gb|EGD46036.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
DSM 2782]
Length = 137
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETHLKES 65
S +A+W R +++S+N+AN TPNY+ KD+ +FE LN + R T E H+
Sbjct: 15 SLNASWA--RNEVISQNLANVDTPNYKRKDV-TFEEYLNDSLDSKRLEGNTTDERHIPIK 71
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+ + + D T +++ GN V I +E+
Sbjct: 72 SKNTDKIKPEITQDNSD--TSMRIDGNNVDIDSEM 104
>gi|213417746|ref|ZP_03350864.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 88
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + S +S H A
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALSLTSSRHIPA 75
Query: 75 HVIEAP 80
+ +P
Sbjct: 76 QAVSSP 81
>gi|260428994|ref|ZP_05782971.1| flagellar basal body rod protein FlgB [Citreicella sp. SE45]
gi|260419617|gb|EEX12870.1| flagellar basal body rod protein FlgB [Citreicella sp. SE45]
Length = 125
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-THET 60
Q + F+ A A +Q I S+N+ANA P YR +I F L Q R T T
Sbjct: 3 QSLDVFRTAMALARHSGLQQAISSQNVANADAPGYRGLEIPDFAETLRQPLTGQRATRAT 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS-----GHIKYL--YELN 113
HL + GL H A +D +GNTV + E+ + H K L Y N
Sbjct: 63 HLNGALQDGL-PEPHTRRATVDP------NGNTVSLETEMVTAVEASRAHNKALSIYRSN 115
Query: 114 TKLIK 118
L++
Sbjct: 116 LTLLR 120
>gi|91792661|ref|YP_562312.1| flagellar basal body rod protein FlgB [Shewanella denitrificans
OS217]
gi|91714663|gb|ABE54589.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans
OS217]
Length = 132
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN---- 73
S+R +++S NIANA+TP+Y+A+D+ F + + AR+H+ L S++S H++
Sbjct: 20 SQRAEVLSSNIANANTPHYKAQDV-DFASAMQS----ARSHQKGLSMSNTSEKHFDLTSL 74
Query: 74 --AHV-IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
H+ P TG GNTV I E Y+++ ++ S + +RG
Sbjct: 75 TQQHIKYRVPNQPDTG---DGNTVDIQKEQSSFMQNALEYQMSLGFLEGKFSGMRKALRG 131
>gi|195941352|ref|ZP_03086734.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi 80a]
gi|216264410|ref|ZP_03436402.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
gi|218249205|ref|YP_002374817.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
gi|221217697|ref|ZP_03589165.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
gi|224533198|ref|ZP_03673798.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
WI91-23]
gi|224533758|ref|ZP_03674346.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
CA-11.2a]
gi|225549095|ref|ZP_03770070.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
gi|225550185|ref|ZP_03771145.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
gi|226320595|ref|ZP_03796155.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 29805]
gi|226321612|ref|ZP_03797138.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi Bol26]
gi|1196315|gb|AAB51407.1| flagellar basal body rod protein [Borrelia burgdorferi]
gi|215980883|gb|EEC21690.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
gi|218164393|gb|ACK74454.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
gi|221192374|gb|EEE18593.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
gi|224511925|gb|EEF82326.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
WI91-23]
gi|224513051|gb|EEF83414.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
CA-11.2a]
gi|225369297|gb|EEG98750.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
gi|225370321|gb|EEG99759.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
gi|226232801|gb|EEH31554.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi Bol26]
gi|226234014|gb|EEH32735.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 29805]
gi|312148512|gb|ADQ31171.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi JD1]
gi|312149176|gb|ADQ29247.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi N40]
Length = 135
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL ++ +L K SD S
Sbjct: 13 RYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFLNEDKNDLNLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
G + P LD + + +GN V I +E+ + +Y L T
Sbjct: 72 GFKNLKYSDVKPHRVLDHFSTMNNNGNNVDIDSEVKALVQNQMMYHLMT 120
>gi|218549199|ref|YP_002382990.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ATCC 35469]
gi|218356740|emb|CAQ89368.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ATCC 35469]
gi|324113868|gb|EGC07842.1| flagellar basal-body rod protein FlgB [Escherichia fergusonii B253]
gi|325497619|gb|EGC95478.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ECD227]
Length = 163
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+D+ F + L + + R + + +S H A
Sbjct: 42 NLRAQRQEVLAANIANADTPGYQARDL-DFASELKKIMVRGRNEAQGVSLTLTSTQHIPA 100
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELN-TKLIKKLNSMV 124
+ AP DQ + + GNTV + E + Y++ T L ++ SM+
Sbjct: 101 QALTAPGAELLYRVPDQPS---LDGNTVDMDRERTQFADNSLRYQMGLTVLGGQIKSMM 156
>gi|313895777|ref|ZP_07829331.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
137 str. F0430]
gi|320529388|ref|ZP_08030476.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
gi|312975202|gb|EFR40663.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
137 str. F0430]
gi|320138354|gb|EFW30248.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
Length = 140
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTH 58
I S+ S R +++S NIAN +TPN+R + FE +L + +A RTH
Sbjct: 11 LDIGSRALAAASLRHEVLSNNIANVNTPNFRRSHV-RFEDLLQKELGLAEDPLMKVVRTH 69
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+ H + H VIE D TT +++ GN V I E+
Sbjct: 70 DRHFPLAFRGKAHG---VIEQ--DSTTNMRLDGNNVDIDIEM 106
>gi|152990370|ref|YP_001356092.1| flagellar basal-body rod protein FlgB [Nitratiruptor sp. SB155-2]
gi|151422231|dbj|BAF69735.1| flagellar basal-body rod protein FlgB [Nitratiruptor sp. SB155-2]
Length = 121
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A++ ER K++ NIANA TPN++ K++ FE L + +T H+ G
Sbjct: 12 ASFFFERSKVIQGNIANADTPNFKPKEL-VFEQELKNRMELKKTDPKHIDPQMQKG---- 66
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
E L Q G N V I EL K +Y+ ++ +KK
Sbjct: 67 -EFKEVELGQIRG--YDNNRVDIQEELAKLAESSIMYKSLSETLKK 109
>gi|296103614|ref|YP_003613760.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058073|gb|ADF62811.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 136
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q LS RQ I++ NIANA TP Y+A+DI Q A + K
Sbjct: 8 FRFQQQALGLLSRRQDILASNIANADTPGYKARDID-----FTQQLKAAMENNAMAKSPV 62
Query: 67 SSGLHWNAHV--IEAPLDQTTGV-------QVSGNTVGITNEL--YKSGHIKY 108
S L N H+ P D + + GNTV + E + +KY
Sbjct: 63 SLSLTSNKHIEGKARPFDDSQLLYRVPDQPSADGNTVDMDRERVNFADNAVKY 115
>gi|187478182|ref|YP_786206.1| flagellar basal body rod protein FlgB [Bordetella avium 197N]
gi|115422768|emb|CAJ49296.1| flagellar basal-body rod protein [Bordetella avium 197N]
Length = 135
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
FFQ Q + ++RQ+++S NIANA TPNY+A+D F+T + QN L R +
Sbjct: 11 FFQ---QAISLRAQRQEVLSSNIANADTPNYKARDF-DFKTAM-QNALDGRMQLPDTQLH 65
Query: 66 DSSGLHWNAHVIE---APLDQTTGVQVS--GNTVGITNE 99
+S H A + A L Q S GNTV + E
Sbjct: 66 LTSARHIPAKAVSSGPAELQYRLPYQASLDGNTVDMDIE 104
>gi|307945655|ref|ZP_07660991.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
gi|307771528|gb|EFO30753.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
Length = 138
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
I FQ W RQ ++SEN+ANA TP Y A+++++F
Sbjct: 10 IPLFQALKSKMQWHQVRQGVLSENVANADTPRYSAREVTAF 50
>gi|291334309|gb|ADD93970.1| predicted flagellar proximal rod protein [uncultured marine
bacterium MedDCM-OCT-S09-C247]
Length = 146
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++ ++ N S+R +I++ NIAN++TPN++AKD+ FE +LN + + T+ + D
Sbjct: 26 LRVHAEALNLRSQRNEILASNIANSATPNFKAKDL-DFEALLNSRMGFGKVNTTNSRHFD 84
Query: 67 SS 68
S
Sbjct: 85 IS 86
>gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
5427]
gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
5427]
Length = 122
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R+ I+SENI+N TP Y+ KD+ FETIL E +K+ ++GL+ E
Sbjct: 20 RKGIISENISNVDTPGYKRKDV-RFETIL----------EKEIKKGGTAGLNLKDIEPEI 68
Query: 80 PLD-QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
D + ++ GN V I E+ + + Y L+ ++NS
Sbjct: 69 YTDYANSSYRLDGNNVDIDVEMAEEAKVSARY---NALVTRVNS 109
>gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
Y4I]
gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
Y4I]
Length = 130
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R + VSENI+NA TP YR K + FE++ L + RT L S+ ++ +H
Sbjct: 21 RLRHVSENISNADTPGYRRKAV-PFESVRELRTDVEHVRTGRVTLDRSELEKVYDPSH-- 77
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM---VMHVVR 129
PL +G G+ V + E+ + + YE N K+ ++ SM +M ++R
Sbjct: 78 --PLADESG-HFEGSNVDLMIEIADAREAQRSYEANLKMFEQTRSMSASLMELLR 129
>gi|149203130|ref|ZP_01880101.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035]
gi|149143676|gb|EDM31712.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035]
Length = 129
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
+ + F++A A RQ +VS+N+ANA TP Y A+DI+ F +
Sbjct: 3 EKMEVFRMAHALAQHAGARQALVSQNMANADTPGYAARDIADFAVV 48
>gi|92114101|ref|YP_574029.1| flagellar basal-body rod protein FlgB [Chromohalobacter salexigens
DSM 3043]
gi|91797191|gb|ABE59330.1| flagellar basal-body rod protein FlgB [Chromohalobacter salexigens
DSM 3043]
Length = 139
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAH--- 75
ERQK+++ NIANA TPNY+A+D F L++ E L + +S H A
Sbjct: 21 ERQKVLANNIANADTPNYKARDF-DFSAELDRAMQSGGGREGGLSLATTSARHIPAQAPG 79
Query: 76 ----------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
V E P + GNTV + E Y+ NT ++ +
Sbjct: 80 GGGVHDLLYRVPEQP-------SLDGNTVDMDRERAAFADNALRYQANTTILTR 126
>gi|114798179|ref|YP_759000.1| flagellar basal body rod protein FlgB [Hyphomonas neptunium ATCC
15444]
gi|114738353|gb|ABI76478.1| putative flagellar protein [Hyphomonas neptunium ATCC 15444]
Length = 123
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ FQ+ A +E QK+ + N+ANA P ++A +I SFE L +RT +
Sbjct: 9 LQLFQVYGAMARHAAESQKVSATNVANADAPGFKAGEIESFEAFL------SRTMQAGGV 62
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
+ SG + AP D +GN V + E++ S
Sbjct: 63 DDMMSG--FKVGTSGAPADP------NGNNVSLEREVFNS 94
>gi|23009955|ref|ZP_00050813.1| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 138
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFL-----MARTHETHLKES 65
W RQ +++EN+ANA P +R +D+ SS +ART H+ S
Sbjct: 18 WHQARQALLAENVANADMPGFRPRDLAEPSRSSAGLAAPLGAAIGGDGLARTDTRHIGLS 77
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
SG + + + V+ SGN V + E+ K+G + Y+L L +K
Sbjct: 78 AESGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQSDYQLVASLYQK 126
>gi|111115119|ref|YP_709737.1| flagellar basal body rod protein FlgB [Borrelia afzelii PKo]
gi|216263868|ref|ZP_03435862.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
gi|110890393|gb|ABH01561.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
gi|215979912|gb|EEC20734.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
Length = 135
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL ++ +L K SD S
Sbjct: 13 RYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFLNKDKNDLNLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
L + P LD + + +GN V I +E+ + +Y L T
Sbjct: 72 ALKNPEYSDIKPHRVLDHFSTMNNNGNNVDIDSEIKALVQNQMMYHLMT 120
>gi|119775453|ref|YP_928193.1| flagellar basal body rod protein FlgB [Shewanella amazonensis SB2B]
gi|119767953|gb|ABM00524.1| flagellar basal-body rod protein FlgB [Shewanella amazonensis SB2B]
Length = 132
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHLKESDSSGLHW 72
+ER +++S NIANA TP+Y+A+D++ + + + MA+T E H S H
Sbjct: 20 AERAEVLSSNIANADTPHYKARDVNFADALQAARSQQRGMQMAQTSEGHFDLQALSRQHV 79
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNE 99
V P TG GNTV I E
Sbjct: 80 QFRVPNQP---DTG---DGNTVDIQQE 100
>gi|148380623|ref|YP_001255164.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str.
ATCC 3502]
gi|153932093|ref|YP_001384909.1| flagellar basal body rod protein FlgB [Clostridium botulinum A str.
ATCC 19397]
gi|153937135|ref|YP_001388378.1| flagellar basal body rod protein FlgB [Clostridium botulinum A str.
Hall]
gi|153941113|ref|YP_001391965.1| flagellar basal body rod protein FlgB [Clostridium botulinum F str.
Langeland]
gi|168183266|ref|ZP_02617930.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
gi|170757776|ref|YP_001782282.1| flagellar basal body rod protein FlgB [Clostridium botulinum B1
str. Okra]
gi|226950078|ref|YP_002805169.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
str. Kyoto]
gi|237796105|ref|YP_002863657.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
str. 657]
gi|148290107|emb|CAL84226.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
3502]
gi|152928137|gb|ABS33637.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str.
ATCC 19397]
gi|152933049|gb|ABS38548.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str.
Hall]
gi|152937009|gb|ABS42507.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F str.
Langeland]
gi|169122988|gb|ACA46824.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B1
str. Okra]
gi|182673652|gb|EDT85613.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
gi|226842504|gb|ACO85170.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
str. Kyoto]
gi|229262300|gb|ACQ53333.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
str. 657]
gi|295319982|gb|ADG00360.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F str.
230613]
Length = 133
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKESDSSGLHW 72
N S R K++S NIAN +TP+Y+ ++ ET+ + N M T E H+ + G+ +
Sbjct: 21 NASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMND----GVEF 76
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
++ +D +T ++ GN V I NE+ + +Y
Sbjct: 77 GQ--VKEEVDNSTSMRTDGNNVDIDNEMVNNSANALMY 112
>gi|88704309|ref|ZP_01102023.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis
KT71]
gi|88701360|gb|EAQ98465.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis
KT71]
Length = 146
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
+++ +++S NIAN+ TP Y+A+DI ++ ++ + M RTH HL S + G
Sbjct: 35 AQKTELLSANIANSDTPGYKARDIDFRAAMQSAMGAQDGMTRTHAAHLNASGTPGSTEPM 94
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ I T + GNTV E + ++Y LN L ++NS+ +RG
Sbjct: 95 YRI------PTQPSLDGNTVESQREHAEFMDNAMRYQASLNL-LDGRINSLRT-AIRG 144
>gi|308173580|ref|YP_003920285.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens DSM 7]
gi|307606444|emb|CBI42815.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens DSM 7]
gi|328911721|gb|AEB63317.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens LL3]
Length = 129
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETHLKESDSSGLHWNAHV 76
+QK+++ NIAN TPNY+AK + SF +L+Q N +T H+ +DS +
Sbjct: 21 KQKVITNNIANIDTPNYKAKKV-SFRNLLDQETSNLEAVKTDYRHVDFTDSGA----DYS 75
Query: 77 IEAPLDQTTGVQVSGNTVGITNEL 100
I + D T Q +GN V I E+
Sbjct: 76 IVSSGD--TSYQQNGNNVDIDKEM 97
>gi|15594639|ref|NP_212428.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi B31]
gi|223888689|ref|ZP_03623280.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b]
gi|1706829|sp|P52608|FLGB_BORBU RecName: Full=Flagellar basal-body rod protein flgB
gi|1165278|gb|AAA85617.1| FlgB [Borrelia burgdorferi]
gi|2688172|gb|AAC66654.1| flagellar basal-body rod protein (flgB) [Borrelia burgdorferi B31]
gi|223885505|gb|EEF56604.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b]
Length = 135
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL ++ +L K SD S
Sbjct: 13 RYLDVLSLRQSVISDNIANIDTPNFKRSKI-SFESELEKAFLNEDKNDLNLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
G + P LD + + +GN V I +E+ + +Y L T
Sbjct: 72 GFKNLKYSDVKPHRVLDHFSTMNNNGNNVDIDSEVKALVQNQMMYHLMT 120
>gi|16125205|ref|NP_419769.1| flagellar basal body rod protein FlgB [Caulobacter crescentus
CB15]
gi|13422229|gb|AAK22937.1| flagellar basal-body rod protein FlgB, putative [Caulobacter
crescentus CB15]
Length = 137
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSF 44
+L+ERQK+V++N+AN+ TP YR D+ F
Sbjct: 7 GYLTERQKLVAQNVANSDTPGYRPSDLKPF 36
>gi|152983100|ref|YP_001353453.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
Marseille]
gi|151283177|gb|ABR91587.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
Marseille]
Length = 141
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLKESDSSGLHWNA 74
S+R ++V+ NIANA TPNY+A+DI F+T LN+ + L +S +
Sbjct: 29 FSKRLEVVASNIANADTPNYKARDI-DFKTALNRALAAPDKIVPKGTLPQSSAVNDVLPK 87
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYEL 112
+ P Q+ V GNTV + E ++ + I+Y + +
Sbjct: 88 LLYRTPYQQS----VDGNTVELDTERAVFTTTAIRYEFAM 123
>gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
Length = 130
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKE 64
++S + R +IVSENIAN TP Y K I FET N M T L
Sbjct: 8 LSVSSSGLRAQASRLRIVSENIANVDTPGYHRKTI-PFETSGNARDGVQMVETGRVDLDR 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SD ++ H PL G G V + EL + + YE N K+ ++ M
Sbjct: 67 SDLERIYDPQH----PLADEAGF-YDGTNVDLIVELADAREAQRSYEANLKMFEQTRQM 120
>gi|94495414|ref|ZP_01301994.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
gi|94424802|gb|EAT09823.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
Length = 123
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
F I + S+R +++ NIANASTP Y+A+DI FE L + A + +
Sbjct: 7 LFGIHGKALALRSQRLSLLASNIANASTPGYKARDI-DFEAALKE----ATAQSSGATST 61
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKY 108
D +A PL + + GNTV ++ E L+ +KY
Sbjct: 62 DMGKAVEDAMGYRVPLQPS----LDGNTVELSTEQTLFAENAVKY 102
>gi|311280020|ref|YP_003942251.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1]
gi|308749215|gb|ADO48967.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1]
Length = 138
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIAN+ TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEILAANIANSDTPGYQARDI-DFASELKKVMDRGRAETSGVSLALTSERHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNE 99
+ AP DQ + + GNTV + E
Sbjct: 76 QTMSAPSVDLMYRVPDQPS---MDGNTVDMDRE 105
>gi|319649570|ref|ZP_08003726.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
gi|317398732|gb|EFV79414.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
Length = 131
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDIS---SFETIL 48
++ S +QK++S+NIANA TPNY+AKD S +F++ L
Sbjct: 16 DYSSLKQKVISQNIANADTPNYKAKDASFKEAFQSAL 52
>gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter
lacuscaerulensis ITI-1157]
Length = 128
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R + VSENI+NA TP YR K + FE + + + L +S S ++ H
Sbjct: 21 RLRHVSENISNADTPGYRRKTV-PFEAVHKDGADLVQAGRVRLDQSKLSRIYDPGH---- 75
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL +G G+ V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 76 PLADESG-HYQGSNVDLMIEIADAREAQRSYEANLKMFDQARQMSSSLMELLR 127
>gi|56551510|ref|YP_162349.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761154|ref|ZP_04759243.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260752883|ref|YP_003225776.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|4378861|gb|AAD19729.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
ZM4]
gi|56543084|gb|AAV89238.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374773|gb|EER64234.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552246|gb|ACV75192.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 117
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T F I ++R +++ NIANA+TPNY+A+DI F L + +ET
Sbjct: 6 TLFGIQGDALVLRNQRMAMLASNIANAATPNYKARDI-DFNKALGE---ATSGNETEEAV 61
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+D+ G P+D++ + GNTV + E + Y I+ S V
Sbjct: 62 NDAMGYR-------VPIDKS----IDGNTVELPTEQAQFAENGLKYRSTLTFIQDRMSDV 110
Query: 125 MHVVRG 130
M ++G
Sbjct: 111 MSSLKG 116
>gi|332284016|ref|YP_004415927.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7]
gi|330427969|gb|AEC19303.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7]
Length = 137
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD---SSGLHWNAH 75
+RQ++++ NIANA TPNY+A+D F LNQ M HL ++ +S H A
Sbjct: 21 KRQEVLAANIANADTPNYKARDF-DFTAALNQ--AMDGGGSMHLPDTQLALTSARHIPAK 77
Query: 76 VI---EAPLDQTTGVQVS--GNTVGITNE 99
+ APL +Q S GNTV + E
Sbjct: 78 AVTPDPAPLLYRQPLQPSMDGNTVDMDVE 106
>gi|238028852|ref|YP_002913083.1| flagellar basal body rod protein FlgB [Burkholderia glumae BGR1]
gi|237878046|gb|ACR30379.1| Flagellar basal-body rod protein FlgB [Burkholderia glumae BGR1]
Length = 167
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F + L ++ H+ +D
Sbjct: 14 FAFGRQALDVRAYRQELISSNIANADTPGYQARDV-DFASALGRSL----KHQAGQAAAD 68
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ + PL + GV SG T+ T + SG+ +
Sbjct: 69 --------NATQLPLARPAGV-TSGMTLAATEPGHMSGNTR 100
>gi|294013083|ref|YP_003546543.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum UT26S]
gi|292676413|dbj|BAI97931.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum UT26S]
Length = 122
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
F I + S+R +++ NIANASTP Y+A+DI FE+ L + A T + +
Sbjct: 7 LFGIHGKALALRSQRLSLLASNIANASTPGYKARDI-DFESALKE----ATTRQGK-SPA 60
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKY 108
D S +A PL + + GNTV ++ E L+ +KY
Sbjct: 61 DVSQAVDDAMGYRVPLQSS----LDGNTVELSTEQTLFAENAVKY 101
>gi|168180910|ref|ZP_02615574.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
2916]
gi|170758458|ref|YP_001787985.1| flagellar basal body rod protein FlgB [Clostridium botulinum A3
str. Loch Maree]
gi|169405447|gb|ACA53858.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A3
str. Loch Maree]
gi|182668259|gb|EDT80238.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
2916]
gi|322806997|emb|CBZ04567.1| flagellar basal-body rod protein FlgB [Clostridium botulinum H04402
065]
Length = 133
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKESDSSGLHWNAH 75
S R K++S NIAN +TP+Y+ ++ ET+ + N M T E H+ + G+ +
Sbjct: 24 SYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMND----GVEFGQ- 78
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
++ +D +T ++ GN V I NE+ + +Y
Sbjct: 79 -VKEEVDNSTSMRTDGNNVDIDNEMVNNSANALMY 112
>gi|257095362|ref|YP_003169003.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047886|gb|ACV37074.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 136
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH---LKESDSSGLHWNAHV 76
RQ++++ NIANA TPNYRA+D F L QN + R+ L + + L +A +
Sbjct: 22 RQQVLAANIANADTPNYRARDF-DFAAAL-QNAVSGRSQGQCGLTLATTAAGHLPGDAEL 79
Query: 77 IEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ L Q S GN+V + E + + YE T + ++ ++G
Sbjct: 80 GQIALKYRQPAQASADGNSVEMDVERAQFAENAFFYETGTTFLTAQIRTMLTALQG 135
>gi|171059415|ref|YP_001791764.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
gi|170776860|gb|ACB34999.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
Length = 134
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHETHLKESDSSGL 70
SERQ++++ NIANA TP Y A+D+ F + L Q +A TH H+ + G
Sbjct: 20 SERQRLIASNIANAETPGYVARDL-DFASALKQAVGEQSVGGALATTHGGHIPV--AVGA 76
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + A Q++ + NTV + E YE + I S +M ++G
Sbjct: 77 RSASQLTYATASQSS---LDNNTVDMDRERASFADNAVKYESTLRFINGSVSTLMSAIKG 133
>gi|170748653|ref|YP_001754913.1| flagellar basal body rod protein FlgB [Methylobacterium
radiotolerans JCM 2831]
gi|170655175|gb|ACB24230.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
Length = 133
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAH 75
W RQ +++EN+ANA P ++ +D+ E ++ T + L + + +
Sbjct: 18 WAQARQGVIAENVANADMPGFKPRDL--VEPRFDRATGALATTGSSLTLTSAGHMAPPGQ 75
Query: 76 VIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKL 116
+ A + G ++ SGN V + +E+ K+G + Y+L L
Sbjct: 76 SVGADSKRAKGFEIRPSGNGVNLEDEMMKAGENQSDYQLAASL 118
>gi|170694389|ref|ZP_02885543.1| flagellar basal-body rod protein FlgB [Burkholderia graminis C4D1M]
gi|170140812|gb|EDT08986.1| flagellar basal-body rod protein FlgB [Burkholderia graminis C4D1M]
Length = 163
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + + RQ+++S NIANA TP Y+A+D+ A + LK++
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDVD-----------FASSLAGALKKTG 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
++G H ++ PL Q GV SG ++ T + + SG
Sbjct: 58 AAG-HTASNTATLPLAQPAGV-TSGMSMAATAQGHMSG 93
>gi|134297201|ref|YP_001120936.1| flagellar basal body rod protein FlgB [Burkholderia vietnamiensis
G4]
gi|134140358|gb|ABO56101.1| flagellar basal-body rod protein FlgB [Burkholderia vietnamiensis
G4]
Length = 162
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F + L AR+ LK++D
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASAL------ARS----LKQTD 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
NA + P+ Q GV SG T+ T + +G K +
Sbjct: 58 GGLAPSNAAQL--PMAQPAGV-TSGMTMVSTAPGHMAGAAKLI 97
>gi|157376219|ref|YP_001474819.1| flagellar basal body rod protein FlgB [Shewanella sediminis
HAW-EB3]
gi|157318593|gb|ABV37691.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
HAW-EB3]
Length = 132
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN-----QNFL-MARTHETHLKESDSSGLH 71
S+R +++S NIANA TP+Y+A+D+ F+ + QN L M+R+ H + SG +
Sbjct: 20 SQRAQVISSNIANADTPHYKARDL-DFDKAMQAATSRQNGLSMSRSDVKHFDLTALSGQN 78
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
V P TG GNTV I E + Y+++ + S + +RG
Sbjct: 79 TAYRVPNQP---DTG---DGNTVDIQQEQSEFMQNALEYQMSLGFLDSKFSGLKKALRG 131
>gi|229029423|ref|ZP_04185506.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
gi|228731882|gb|EEL82781.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
Length = 135
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + LN N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSVLYKSNAADLNSNPDLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 69 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans
OCh 114]
gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
149]
gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans
OCh 114]
gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
149]
Length = 129
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHETHLKESDSSGLHWNAHVIE 78
R + +SENI+NA TP YR K + SFET Q T L +S ++ +H
Sbjct: 21 RLRHLSENISNADTPGYRRK-LVSFETAFGGQGVSTVETSRVRLDQSTLERVYDPSH--- 76
Query: 79 APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
P+ +G G+ V + EL + + YE N K+ +K++S +M ++R
Sbjct: 77 -PMADESGY-FDGSNVDLLIELSDAREAQRSYEANLKVFEQTRKMSSSLMELLR 128
>gi|110677658|ref|YP_680665.1| flagellar basal body rod protein FlgB [Roseobacter denitrificans
OCh 114]
gi|109453774|gb|ABG29979.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
denitrificans OCh 114]
Length = 132
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MART 57
+ F++A A E+Q + ++N+AN+ TP+Y+A+D+ F +++ T
Sbjct: 5 LEVFRMAHAMAVHAGEKQAVTAQNVANSDTPDYQARDVIPFSDTYSRDPANGGWGSQKAT 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGV-QVSGNTVGITNELYKS 103
+TH+ + A P+ GV +GNTV + NE+ KS
Sbjct: 65 RQTHINGA-------AAGQTPDPIIDENGVGSPNGNTVSLENEMLKS 104
>gi|225552255|ref|ZP_03773195.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
gi|225371253|gb|EEH00683.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
Length = 135
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL + +L K SD S
Sbjct: 13 RYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFLNEDKNNLNLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
G + P LD + + +GN V I +E+ + +Y L T
Sbjct: 72 GFKNLKYSDVKPHRVLDHFSTMNNNGNNVDIDSEVKALVQNQMMYHLMT 120
>gi|323947625|gb|EGB43629.1| flagellar basal-body rod protein FlgB [Escherichia coli H120]
Length = 138
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P+ DQ + + GNTV + E
Sbjct: 76 QALTPPIAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|42780836|ref|NP_978083.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 10987]
gi|42736756|gb|AAS40691.1| flagellar basal-body rod protein FlgB [Bacillus cereus ATCC 10987]
Length = 135
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + +++ T LK +
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNTTDLKTNADLYQ 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|154686034|ref|YP_001421195.1| flagellar basal body rod protein FlgB [Bacillus amyloliquefaciens
FZB42]
gi|154351885|gb|ABS73964.1| FlgB [Bacillus amyloliquefaciens FZB42]
Length = 129
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK+++ NIAN TPNY+AK + SF +L+Q +T + D +G + ++ +
Sbjct: 21 KQKVLTNNIANIDTPNYKAKKV-SFRNLLDQETSNLEAVKTDYRHVDFTGSGDDYSIVSS 79
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V I E+
Sbjct: 80 S---DTSYQQNGNNVDIDKEM 97
>gi|187926957|ref|YP_001893302.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
gi|241665286|ref|YP_002983645.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
gi|187728711|gb|ACD29875.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
gi|240867313|gb|ACS64973.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
Length = 151
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMART 57
F Q S+R +I++ NIANA TPNY+A+D F++ L + + M T
Sbjct: 8 LFGFQEQALRLRSQRHQILASNIANADTPNYKARDF-DFQSALQKAVGQQSGNSLPMTAT 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGV-------------QVSGNTVGITNE--LYK 102
HL + +++A L Q T + GNTV + E +
Sbjct: 67 AAGHLTVDGAPA--GEVALMQASLSQQTKALQGEVQYRTSQQPSIDGNTVDMDGERMRFA 124
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHV 127
++Y +LN + +K+ SM+ +
Sbjct: 125 DNTVRYEADLNI-VTQKIKSMLAAI 148
>gi|194014328|ref|ZP_03052945.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC 7061]
gi|194013354|gb|EDW22919.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC 7061]
Length = 131
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK++S NIAN TPNY++K++ +F +LN + +T+ D S N V+ +
Sbjct: 23 KQKVISNNIANIDTPNYKSKNV-AFHDMLNDASIKLDAKKTYQGHIDFSKTGSNYSVVSS 81
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V I E+
Sbjct: 82 ---NRTSYQENGNNVDIDQEM 99
>gi|219684621|ref|ZP_03539564.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
gi|219671983|gb|EED29037.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
Length = 135
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ ++S+NIAN TPN++ I SFE+ L + F ++ L K SD S
Sbjct: 13 RYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFSNKGKNDLSLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
GL + P LD + + +GN V I +E+ + +Y L T +
Sbjct: 72 GLKNPEYSDVKPHRVLDHFSTMNNNGNNVDIDSEIKALVQNQMMYSLMTNV 122
>gi|170725952|ref|YP_001759978.1| flagellar basal body rod protein FlgB [Shewanella woodyi ATCC
51908]
gi|169811299|gb|ACA85883.1| flagellar basal-body rod protein FlgB [Shewanella woodyi ATCC
51908]
Length = 132
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSSGLH 71
S+R +++S NIANA TP+Y+A+DI F+ L + M + H + S H
Sbjct: 20 SQRAEVISSNIANADTPHYKARDI-DFDKALQAATSQQRGLAMTGSDSKHFDLAALSEQH 78
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ V P TG GNTV I E
Sbjct: 79 YGYRVPNQP---DTG---DGNTVDIQQE 100
>gi|157692297|ref|YP_001486759.1| flagellar basal body rod protein FlgB [Bacillus pumilus SAFR-032]
gi|157681055|gb|ABV62199.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
Length = 129
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+QK++S NIAN TPNY++K++ +F +LN + +T+ D S N V+ +
Sbjct: 21 KQKVISNNIANIDTPNYKSKNV-AFHDMLNDASIKLDAKKTYQGHIDFSKTGSNYSVVSS 79
Query: 80 PLDQTTGVQVSGNTVGITNEL 100
T Q +GN V I E+
Sbjct: 80 ---NRTSYQENGNNVDIDQEM 97
>gi|54307267|ref|YP_128287.1| flagellar basal body rod protein FlgB [Photobacterium profundum
SS9]
gi|46911687|emb|CAG18485.1| Hypothetical FlgB putative flagellar basal-body rod protein
[Photobacterium profundum SS9]
Length = 139
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 4 ITFFQIASQHANWLS---ERQKIVSENIANASTPNYRAKDISSFETILNQ 50
I F Q H N L+ +R K+++ N+AN TPNY+A+DI SFE ++Q
Sbjct: 17 INFEQALGVHPNTLAFRTQRAKVLASNLANVDTPNYKARDI-SFEDAMSQ 65
>gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
Length = 130
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 24 VSENIANASTPNYRAKDISSFETIL--NQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
VSENIANA TP YR K + SFET ++ +L + ++ +H PL
Sbjct: 25 VSENIANADTPGYRRKTV-SFETAFAGSEGTGAVEVSRVNLDRRELQKIYDPSH----PL 79
Query: 82 DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL---IKKLNSMVMHVVR 129
TG G+TV + E+ + + YE N K+ ++++++ +M ++R
Sbjct: 80 ADETG-HYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQMSAGLMDLLR 129
>gi|332305612|ref|YP_004433463.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172941|gb|AEE22195.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 133
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 8/52 (15%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS------SFETILNQNFLMARTHETHLK 63
+ER ++++ N+ANA+TP Y+A+DI+ S ++ +QN + RTHE H+K
Sbjct: 20 TERMEVLAGNLANANTPGYKARDINFQDAMRSAQSGRSQN--LTRTHENHIK 69
>gi|323967014|gb|EGB62440.1| flagellar basal-body rod protein FlgB [Escherichia coli M863]
gi|323976554|gb|EGB71642.1| flagellar basal-body rod protein FlgB [Escherichia coli TW10509]
gi|327253472|gb|EGE65110.1| flagellar basal-body rod protein FlgB [Escherichia coli STEC_7v]
Length = 138
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDETSMVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|118588701|ref|ZP_01546109.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
gi|118438687|gb|EAV45320.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
Length = 134
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHET- 60
+ FQ W RQ ++++NIANA TP Y A+D+ SF+ + + L T T
Sbjct: 6 LPLFQALKSKMQWHQTRQSVLAQNIANADTPGYMARDVKEYSFKDHIGRQSLNLSTDTTA 65
Query: 61 --HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H++ S G A + E D T V SGN+V + ++ + Y+ T L
Sbjct: 66 SGHIR--GSLGATDKAKIEE---DDTFEVTPSGNSVNLEEQMMHITENQMDYQAATTLYT 120
Query: 119 K 119
K
Sbjct: 121 K 121
>gi|262273532|ref|ZP_06051346.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
gi|262222510|gb|EEY73821.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
Length = 124
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
++ +R K+++ N+AN TPNY+A+DI SFE ++ + +R H++ D S H+
Sbjct: 17 DFRIQRAKVIAGNLANVDTPNYKARDI-SFEQAMDS--IASRARMNHIQRRDVSQ-HYTL 72
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN-TKLIKKLNSM 123
E P+ + GNTV + E K +E + T L KLN +
Sbjct: 73 QYRE-PMQPSQ----DGNTVELGVEQAKFAENAMAFETSMTFLNMKLNGL 117
>gi|229195956|ref|ZP_04322709.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
gi|228587515|gb|EEK45580.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
Length = 135
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + +++ LK +
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNTADLKTNADLYQ 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H NA A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNAKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|159045787|ref|YP_001534581.1| flagellar basal body rod protein FlgB [Dinoroseobacter shibae DFL
12]
gi|157913547|gb|ABV94980.1| flagellar basal-body rod protein FlgB [Dinoroseobacter shibae DFL
12]
Length = 126
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ +T AS +ER +++ NIA+A TP YR +D+ F + M +
Sbjct: 1 MKNLTILNTASAMVAHANERHGVIARNIAHADTPGYRTQDLKDFTDSYRE---MTSSGLR 57
Query: 61 HLKESDSSGLHWNAHV-IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
++ + G H + ++ LD T V +GN+V + +E+ + ++ +EL + K
Sbjct: 58 ATRDDHAFGAHRGLDLSVQTVLD--TPVAPNGNSVSLEHEMIRMAENRHQHELALSVYK 114
>gi|225181614|ref|ZP_03735055.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus
AHT 1]
gi|225167722|gb|EEG76532.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus
AHT 1]
Length = 137
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSSGLHW 72
ER ++++ N+AN +TP ++ +D+ SFE L Q +A THE H+ S L
Sbjct: 22 ERNRVMAHNVANVNTPMFKRQDV-SFEKQLRQALAAPSRLPLATTHERHVGGQKS--LQD 78
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
H + D+++ ++ GN V I E+ + Y T+++ + S++ +V+
Sbjct: 79 VGHKVST--DRSSAMRSDGNNVDIDREMALMATNQLNYNAMTQVLNERYSLLRYVI 132
>gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
KLH11]
gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
KLH11]
Length = 128
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R + VSENI+NA TP YR K + FET+ + + L D ++ H
Sbjct: 21 RLRHVSENISNADTPGYRRKTV-PFETVKRGGAELVQVGHVKLDRRDPGQIYDPGH---- 75
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
P+ G G+ V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 76 PMADEAGY-YRGSNVDLMIEIADAREAQRSYEANLKMFDQTRQMSSSLMDLLR 127
>gi|325983735|ref|YP_004296136.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
gi|325533254|gb|ADZ27974.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
Length = 139
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---------RTHETHL 62
Q N + RQ++++ N+ANA TPN++A+DI F ++L + + T H+
Sbjct: 16 QALNLRAARQELLASNVANADTPNFKARDI-DFSSVLREKLSLTTNITQVGLITTSSGHI 74
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKY 108
S + L + + PL + GNTV + E + IKY
Sbjct: 75 STSPAGILGGDNLLYRVPLQPS----ADGNTVDMNMERTQFADNSIKY 118
>gi|295097206|emb|CBK86296.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 136
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN 49
F+ Q LS RQ++++ NIANA TP Y+A+DI + + N
Sbjct: 9 FRFQQQALGLLSRRQEVLASNIANADTPGYQARDIDFSQQLKN 51
>gi|167585191|ref|ZP_02377579.1| flagellar basal body rod protein FlgB [Burkholderia ubonensis Bu]
Length = 162
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F + L AR+ LK+ +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFSSTL------ARS----LKQVN 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
NA + PL Q GV SG T+ T + +G+ K +
Sbjct: 58 GGVAPSNAAQL--PLAQPAGV-TSGMTMASTAPGHMAGNAKLI 97
>gi|311694358|gb|ADP97231.1| fFlagellar basal-body rod protein FlgB [marine bacterium HP15]
Length = 139
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSS 68
+R ++++ N+ANA TP ++A+D+ F+ ++ + F MA+TH+ H+ S S+
Sbjct: 28 KRAEVLANNLANADTPGFKARDL-DFQAMMQKAQEQVSGFQMAKTHDAHMDTSPSA 82
>gi|222095367|ref|YP_002529427.1| flagellar basal body rod protein flgb [Bacillus cereus Q1]
gi|221239425|gb|ACM12135.1| flagellar basal-body rod protein FlgB [Bacillus cereus Q1]
Length = 172
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + +++ LK +
Sbjct: 46 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNTADLKTNADLYQ 104
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H NA A + QT +Q + GN+V +T E+
Sbjct: 105 TNEMHLPTVNAKNTYAKI-QTKSMQTNKDGNSVDVTTEM 142
>gi|117919769|ref|YP_868961.1| flagellar basal body rod protein FlgB [Shewanella sp. ANA-3]
gi|117612101|gb|ABK47555.1| flagellar basal-body rod protein FlgB [Shewanella sp. ANA-3]
Length = 134
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN--------QNFLMARTHETHLKESDSSG 69
+ER +++S NIANA TP+Y+A+D+ F LN +N L E H + +G
Sbjct: 20 AERAEVISSNIANADTPHYKARDV-DFSAALNIAKTQQQQRNSLEMTGDEQHFGLAQLTG 78
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ V P TG GNTV I E Y+++ + S + +R
Sbjct: 79 QYVKFRVPNQP---DTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSGMKKALR 132
Query: 130 G 130
G
Sbjct: 133 G 133
>gi|149202211|ref|ZP_01879184.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
gi|149144309|gb|EDM32340.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
Length = 128
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N +R +++ NIANA+TP ++A+D+ FET+LN ++ + +SGL+
Sbjct: 17 NLREQRGAMLASNIANAATPGFKARDM-DFETVLNAETGGGALATSNGRHFATSGLNAGQ 75
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P++ + + GNTV + E + Y+ + L+ + S + ++G
Sbjct: 76 AGYRVPVNPS----LDGNTVELAVEQMEFAENSLRYQTSLTLLNRRISGLNTAIKG 127
>gi|119899030|ref|YP_934243.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
gi|119671443|emb|CAL95356.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
Length = 133
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMAR 56
Q + F Q A N + RQ++++ NIANA TP+Y+A+DI E + N +A
Sbjct: 7 QQLQFHQTA---LNLQAHRQQLLASNIANADTPHYKARDIDFREALQGALGKQSNLALAT 63
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNE 99
T H+ V+E T +Q V GNTV + E
Sbjct: 64 TQSRHIAGG-------GGDVLEGATKYRTELQSAVDGNTVNMDVE 101
>gi|239817168|ref|YP_002946078.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110]
gi|239803745|gb|ACS20812.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110]
Length = 136
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIA+A TPNY+A+D F + L Q R + ++ + +S H A
Sbjct: 17 NLRTQRQEVLAANIAHADTPNYKARDF-DFASRLTQAVEHGRAAQQPVQMAATSARHIQA 75
Query: 75 HVIEAPLDQ------TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMV 124
+ ++ + + GNTV + E YE N ++ K+ S++
Sbjct: 76 DAPSSMPERDLLYRVPSQASIDGNTVEMDAERINFADNALRYEANLTVVSAKIKSLL 132
>gi|307546971|ref|YP_003899450.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM 2581]
gi|307218995|emb|CBV44265.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM 2581]
Length = 137
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----------NFLMAR 56
F Q + ERQ++++ NIANA TP Y+A+D+ F + L Q + R
Sbjct: 9 FNFQQQALSLRHERQQVLASNIANADTPGYKARDM-DFSSALEQAMQRGGGNAEGLALER 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
T HL +S L + + P DQ + + GNTV + E
Sbjct: 68 TSARHLA-GQASTLPRSELLYRVP-DQPS---LDGNTVDMDRE 105
>gi|152997585|ref|YP_001342420.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1]
gi|150838509|gb|ABR72485.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1]
Length = 130
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHL 62
+ S R +++ NIANA TPNY+A+DI SF++ LN + +A T+ H+
Sbjct: 18 FRSARAAVLANNIANADTPNYKARDI-SFDSFLNNESKKLQLAGTNSRHI 66
>gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040]
gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040]
Length = 130
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 24 VSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
VSENI+NA TP YR K + SF+++ L + R L ++ ++ +H PL
Sbjct: 25 VSENISNADTPGYRRKTV-SFQSVRDLETDVSQVRVGRVSLDRTELEQVYDPSH----PL 79
Query: 82 DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
TG G+ V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 80 ADETG-HYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQMSSSLMDLLR 129
>gi|146278634|ref|YP_001168793.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
ATCC 17025]
gi|145556875|gb|ABP71488.1| Flagellar basal body protein-like protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 127
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
+ + ++A A R +++ N+AN+ TP YRA+D+ FE+ + T H
Sbjct: 3 EKLELVRMAQAMARHAGARTDVIARNVANSDTPGYRARDLPDFESYAEGRTGLRGTRAGH 62
Query: 62 LK 63
L+
Sbjct: 63 LR 64
>gi|325921021|ref|ZP_08182903.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
19865]
gi|325548503|gb|EGD19475.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
19865]
Length = 182
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSSGLHW 72
+R K+++ N++N TP Y+AKD+ FE L LM T H + +S GL
Sbjct: 70 QRMKLIASNLSNVDTPGYKAKDM-DFEAALKSAEGVRDGSLMQTTDAKHYEIGNSGGL-- 126
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMVMHVV 128
N I DQ + + GNTV E G Y + ++ K+ SM+ +
Sbjct: 127 NPFQITRESDQPS---LDGNTVDADAERAAYGRAALEYRASLSFLESKVRSMLTAIT 180
>gi|170768328|ref|ZP_02902781.1| flagellar basal-body rod protein FlgB [Escherichia albertii
TW07627]
gi|170123094|gb|EDS92025.1| flagellar basal-body rod protein FlgB [Escherichia albertii
TW07627]
Length = 138
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE-SDSSGLHWN 73
N ++RQ++++ NIANA TP Y+A+DI F + L + + R ET + + +S H
Sbjct: 17 NLRAQRQEVLAANIANADTPAYQARDI-DFASEL-KRVMQRRRDETRVVALTLTSTQHIP 74
Query: 74 AHVIEAP--------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
A V+ P DQ + + GNTV + E + Y+++ + VM
Sbjct: 75 AQVLTPPSAELQYRIPDQPS---LDGNTVDMDRERTQFADNSLQYQMSLSALSSQIKGVM 131
Query: 126 HVVRG 130
+V++
Sbjct: 132 NVLQS 136
>gi|321445153|gb|EFX60611.1| hypothetical protein DAPPUDRAFT_342411 [Daphnia pulex]
Length = 136
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE----SDSSGLHWN 73
SERQ++++ NIANA TP Y+A+D+ F + L + AR + S +G
Sbjct: 20 SERQRLLASNIANADTPGYKARDM-DFASALREATGAARGGAMAATQAGHISPPAGARSE 78
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKY---LYELNTKLIKKLNSMVMH 126
A ++ A QT + NTV + E + IKY L +N+ + L+SM H
Sbjct: 79 AKLLWAAPSQT---NLDNNTVDMDRERASFADNSIKYEATLRFINSSVRTTLDSMKSH 133
>gi|323698499|ref|ZP_08110411.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. ND132]
gi|323458431|gb|EGB14296.1| flagellar basal-body rod protein FlgB [Desulfovibrio
desulfuricans ND132]
Length = 136
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 19 ERQKIVSENIANASTPNYRAKDI---SSFETILNQNFL--MARTHETHL 62
ERQ IV+ NIAN +TP Y+A+ + ++ LNQN L + RT + HL
Sbjct: 21 ERQNIVTGNIANVNTPGYKARRLEFEERLQSALNQNALGKLTRTQQDHL 69
>gi|163856432|ref|YP_001630730.1| flagellar basal body rod protein FlgB [Bordetella petrii DSM 12804]
gi|163260160|emb|CAP42462.1| flagellar basal-body rod protein FlgB [Bordetella petrii]
Length = 135
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q +ERQ+++S NIANA TPNY+A+D F+ + +N L R + +
Sbjct: 9 FRFYQQAIALRAERQEVLSSNIANADTPNYKARDF-DFQAAM-RNALDTRMRLPDTQLAL 66
Query: 67 SSGLHWNAHVI---EAPLDQTTGVQ--VSGNTVGITNE 99
+S H A + A L Q + GNTV + E
Sbjct: 67 TSARHIPAKAVTPDPAELLYRLPYQPSIDGNTVDMDAE 104
>gi|311105932|ref|YP_003978785.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
A8]
gi|310760621|gb|ADP16070.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
A8]
Length = 135
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
FFQ Q ++RQ+++S NIANA TPNY+A+D F+T +
Sbjct: 11 FFQ---QSLGLRAQRQEVLSSNIANADTPNYKARDF-DFKTAM 49
>gi|302392399|ref|YP_003828219.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum DSM
5501]
gi|302204476|gb|ADL13154.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum DSM
5501]
Length = 135
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFL-MARTHETHLKE 64
+ ++ + L +RQ+ +S NIAN TP+Y+ KD+ S +T LN + + TH+ H
Sbjct: 12 VLTKALDGLQQRQEAISNNIANVDTPDYKRKDVNFKSELKTALNNDSTGLTATHKNHF-- 69
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
S+ + + + D T ++ N V I E+
Sbjct: 70 --STNSNLDQLSLRIKTDSNTKMRSDQNNVDIDREM 103
>gi|15616943|ref|NP_240156.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|25403596|pir||B84969 flagellar basal-body rod protein flgB [imported] - Buchnera sp.
(strain APS)
gi|10039008|dbj|BAB13042.1| flagellar basal-body rod protein flgB [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 115
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHETHLKESDSSGLHW 72
RQ+I+S NIANA TP Y++ D +F+ LN+ + +T HL E H
Sbjct: 4 RQEILSANIANADTPGYKSIDF-NFKNELNKTLYKNKKTIFLKKTSPNHLNEK-----HK 57
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
N +++ T ++ GNTV + E + + IKY L IK +M+V++G
Sbjct: 58 NLFLLKTIPVLTNQIKQDGNTVNMDRERIEFLNNSIKYQSSL--VFIKNEIKNMMYVLKG 115
>gi|325529010|gb|EGD06023.1| flagellar basal body rod protein FlgB [Burkholderia sp. TJI49]
Length = 162
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 18/100 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F + L AR+ LK+++
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASAL------ARS----LKQAN 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
NA + P+ Q GV T G+T +GH+
Sbjct: 58 GGLAPSNAAQL--PMTQPAGV-----TSGMTMASTAAGHM 90
>gi|313683370|ref|YP_004061108.1| flagellar basal-body rod protein flgb [Sulfuricurvum kujiense DSM
16994]
gi|313156230|gb|ADR34908.1| flagellar basal-body rod protein FlgB [Sulfuricurvum kujiense DSM
16994]
Length = 142
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 12/65 (18%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL-----------NQNFLMARTHETHLK 63
++ + RQ ++S NIANA TP YR +DI SFE L +Q MA T+ HL
Sbjct: 17 DYRAARQDMISGNIANADTPFYRPRDI-SFEDTLAQKSAQIFGDKSQTLKMAHTNGAHLD 75
Query: 64 ESDSS 68
D++
Sbjct: 76 GIDAA 80
>gi|167623358|ref|YP_001673652.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
gi|167353380|gb|ABZ75993.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
Length = 132
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S+R +++S NIANA TPNY+A+D+ ++ A++ ++ L + S H++ +
Sbjct: 20 SQRAEVLSSNIANADTPNYKARDVD-----FSKAMGAAQSQQSGLAMTKSDTKHFD---M 71
Query: 78 EAPLDQTTGVQV-------SGNTVGITNE 99
A Q G +V GNTV I E
Sbjct: 72 AALTQQHVGYRVPNQPDTGDGNTVDIQQE 100
>gi|194365683|ref|YP_002028293.1| flagellar basal body rod protein FlgB [Stenotrophomonas maltophilia
R551-3]
gi|194348487|gb|ACF51610.1| flagellar basal-body rod protein FlgB [Stenotrophomonas maltophilia
R551-3]
Length = 131
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHE 59
+ + +Q +R K+++ N+ NA TP Y+A+D+ F+ L + N LM T+E
Sbjct: 8 YLGVHAQAMPLREQRMKLIASNLGNADTPGYKAQDL-DFDAALRHAQGQDANGLMTTTNE 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLI 117
H + SSGL+ E GVQ S GNTV E G Y + +
Sbjct: 67 QHYEI--SSGLNPFQIARE-------GVQPSLDGNTVDPDAERAAYGRAALEYRASLSFV 117
Query: 118 K-KLNSMVMHVV 128
+ K+ SM+ +
Sbjct: 118 ESKVRSMLTAIT 129
>gi|34557981|ref|NP_907796.1| flagellar basal body rod protein FlgB [Wolinella succinogenes DSM
1740]
gi|34483699|emb|CAE10696.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGB PROXIMAL ROD PROTEIN
[Wolinella succinogenes]
Length = 145
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------NQNFLMA 55
++A + ++ S RQ ++S NIAN TP YR +DI +FE +L N+ +
Sbjct: 13 ELAYKALDYRSLRQDLISSNIANVDTPMYRPRDI-NFEEVLTSESQKLFSNEQNKTLGLG 71
Query: 56 RTHETHLKESDSS 68
+T+ HL+ D+S
Sbjct: 72 QTNAMHLEPMDTS 84
>gi|192292777|ref|YP_001993382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
TIE-1]
gi|192286526|gb|ACF02907.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
TIE-1]
Length = 135
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 22/26 (84%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI 41
W ERQK+++ENI+N+ TPN+R +D+
Sbjct: 18 WHQERQKVLAENISNSDTPNFRPRDL 43
>gi|146341895|ref|YP_001206943.1| flagellar basal body rod protein FlgB [Bradyrhizobium sp. ORS278]
gi|146194701|emb|CAL78726.1| Putative flagellar basal-body rod protein flgB (putative proximal
rod protein) [Bradyrhizobium sp. ORS278]
Length = 135
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 20/115 (17%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI------SSFETILNQNFL-MARTHETHLKES--D 66
W ERQ+++SEN++N+ TPN++ KD+ S+ +++ L + RT H+ + D
Sbjct: 18 WHQERQRVLSENVSNSDTPNFKPKDLVEPKFDSTGQSVGGFAPLSLTRTSAAHITPASGD 77
Query: 67 SSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S+ N + G Q +GN V + E+ K + Y T L K
Sbjct: 78 SASFDQNRKI---------GFQTRPAGNAVSLEEEMLKVSANQMDYAAATSLYGK 123
>gi|316936688|gb|ADU60340.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 87
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + + +S H A
Sbjct: 11 NLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALTLTSSHHIPA 69
Query: 75 HVIEAP 80
+ +P
Sbjct: 70 QAVSSP 75
>gi|289666044|ref|ZP_06487625.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670503|ref|ZP_06491578.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 133
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 13 HANWLS---ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLK 63
H + L+ +R K+++ N++N TP Y+AKD+ +FE L LM T H +
Sbjct: 12 HGDALALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTDAKHYE 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNS 122
SGL N I DQ + + GNTV E G Y + ++ K+ S
Sbjct: 71 VGGGSGL--NPFQITRESDQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRS 125
Query: 123 MVMHVV 128
M+ +
Sbjct: 126 MLTAIT 131
>gi|39936949|ref|NP_949225.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
CGA009]
gi|39650806|emb|CAE29329.1| possible flagellar basal-body rod protein FlgB [Rhodopseudomonas
palustris CGA009]
Length = 168
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 22/26 (84%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI 41
W ERQK+++ENI+N+ TPN+R +D+
Sbjct: 51 WHQERQKVLAENISNSDTPNFRPRDL 76
>gi|330502731|ref|YP_004379600.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina
NK-01]
gi|328917017|gb|AEB57848.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina
NK-01]
Length = 135
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
I Q + ++R +++S NIANA TPNY+A+D+ + QN M R
Sbjct: 11 IHEQALGFRAQRAEVLSNNIANADTPNYKARDLDFASVLAEQNSRMQR 58
>gi|85712251|ref|ZP_01043302.1| Flagellar basal body protein [Idiomarina baltica OS145]
gi|85693878|gb|EAQ31825.1| Flagellar basal body protein [Idiomarina baltica OS145]
Length = 134
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLKESDSSGLH 71
++R ++++ NIANA TP Y+AK + F+ L Q+ +ARTHE H S
Sbjct: 20 TQRAELIANNIANADTPGYKAKGL-DFQQALAQAQRGIQSHSLARTHEKHFSVEISPQGQ 78
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELN 113
V P TG GNTV + E LY ++Y +N
Sbjct: 79 EKFRVPSQP---DTG---DGNTVDVQVEQNLYAKNALEYEMTMN 116
>gi|88858146|ref|ZP_01132788.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
D2]
gi|88819763|gb|EAR29576.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
D2]
Length = 134
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETHL 62
+R ++++ NIANA TP Y+AKDI + + + Q+ ++RTHE H
Sbjct: 21 QRAEVLASNIANADTPGYKAKDIDFAQALKSAKSAQSSQLSRTHEKHF 68
>gi|117923582|ref|YP_864199.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
gi|117607338|gb|ABK42793.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
Length = 137
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 14 ANWLS---ERQKIVSENIANASTPNYRAKDISSFE------TILNQNFLMARTHETHLKE 64
AN L RQ I++ NIANA TP Y+A+ + SFE T + + MAR+ HL
Sbjct: 15 ANLLDLRQRRQDIIAANIANADTPGYKARRL-SFEEELAKSTPRDGDLPMARSDPRHLPA 73
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+E P+ + N+V + E+ + + LY T+ + + +
Sbjct: 74 QGFLAASGEIQEVETPISKG-----DMNSVDMEQEMARQTANQLLYNYATQSLNGQITKM 128
Query: 125 MHVVRG 130
+RG
Sbjct: 129 KMAIRG 134
>gi|32490787|ref|NP_871041.1| hypothetical protein WGLp038 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165993|dbj|BAC24184.1| flgB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 136
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+F N + RQ I+S NIANA TP Y+++DI F+ +L +NF ++ +L
Sbjct: 8 YFNFQKAATNIFANRQAIISSNIANADTPKYQSRDI-DFKKLL-KNFNELDKNKRNLNLK 65
Query: 66 DSSGLHWNAHVIEAPLDQ---TTGVQVS--GNTVGITNE 99
+S H N + L + +Q S GNTV + E
Sbjct: 66 LTSKKHINKKNLFTSLGKLLYRVPIQASADGNTVDMDVE 104
>gi|294140181|ref|YP_003556159.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
gi|293326650|dbj|BAJ01381.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
Length = 132
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++R ++++ NIANA TP+Y+A+D+ +F+ L A + + L S S H++ +
Sbjct: 20 AQRAEVIASNIANADTPHYKARDV-NFDKALQ----AASSRQGGLAMSSSDSRHFD---L 71
Query: 78 EAPLDQTTGVQV-------SGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
EA Q G +V GNTV + E + Y+++ + S + +RG
Sbjct: 72 EALSQQNYGYRVPNQPDTGDGNTVDMQKEQSEFMQNALEYQMSLGFLDGKFSGLKKAIRG 131
>gi|78043872|ref|YP_359837.1| flagellar basal-body rod protein FlgB [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995987|gb|ABB14886.1| flagellar basal-body rod protein FlgB [Carboxydothermus
hydrogenoformans Z-2901]
Length = 136
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFE----TILNQ---NFLMARTHETHLKESDSSGLHW 72
RQ+ ++ NIAN +TP YR K++ FE LNQ NF + TH HL + +
Sbjct: 22 RQQAIAHNIANVNTPGYR-KEVVVFEEKVQEFLNQKKGNFSLKTTHPRHL-----TAKGF 75
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMVMHVVRG 130
+ E + +T +++ N V I E+ + + YE + +K L S+ M + G
Sbjct: 76 SLPFAEIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERLKGTLASLEMVITGG 134
>gi|293605000|ref|ZP_06687396.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
ATCC 43553]
gi|292816605|gb|EFF75690.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
ATCC 43553]
Length = 135
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F+ Q ++RQ+++S NIANA TPNY+A+D F+T +
Sbjct: 9 FRFYQQALGLRAQRQEVLSSNIANADTPNYKARDF-DFKTAM 49
>gi|21231400|ref|NP_637317.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768547|ref|YP_243309.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113066|gb|AAM41241.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573879|gb|AAY49289.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 133
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 3 PIT-FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMA 55
P T F I +R K+++ N++N TP Y+AKD+ +FE L LM
Sbjct: 4 PFTSFLGIHGDALTLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKAAEGVRDGGLMQ 62
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T H + ++GL N I DQ + + GNTV E G Y +
Sbjct: 63 ATDAKHYEIGSTAGL--NPFQITREADQPS---LDGNTVDPDAERAAYGRAALEYRASLS 117
Query: 116 LIK-KLNSMVMHVV 128
++ K+ SM+ +
Sbjct: 118 FLESKVRSMLTAIT 131
>gi|295399806|ref|ZP_06809787.1| flagellar basal-body rod protein FlgB [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111682|ref|YP_003989998.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
gi|294978209|gb|EFG53806.1| flagellar basal-body rod protein FlgB [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216783|gb|ADP75387.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
Length = 130
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHL 62
Q ++ + R+K+++ NIAN TPNY+AK + F T L+ Q RTH HL
Sbjct: 13 QGLDYAALREKVIANNIANVDTPNYKAKSV-QFRTELDRALQPLEAKRTHPKHL 65
>gi|188991644|ref|YP_001903654.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
campestris str. B100]
gi|167733404|emb|CAP51605.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 224
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSSGLHW 72
+R K+++ N++N TP Y+AKD+ +FE L LM T H + ++GL
Sbjct: 112 QRMKLIASNLSNVDTPGYKAKDL-NFEAALKAAEGVRDGGLMQATDAKHYEIGSTAGL-- 168
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMVMHVV 128
N I DQ + + GNTV E G Y + ++ K+ SM+ +
Sbjct: 169 NPFQITREADQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTAIT 222
>gi|255608368|ref|XP_002538891.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis]
gi|223509946|gb|EEF23492.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis]
Length = 156
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 19 ERQKIVSENIANASTPNYRAKDI---SSFETILNQNF----------LMARTHETHLKES 65
+RQ++++ NIANA TP Y+A+DI S+ ++ L Q+ M +T+ H+ +
Sbjct: 32 QRQELLASNIANADTPQYKARDIDFQSAMQSALQQSAGVGPATQPASEMQQTNNAHMNGN 91
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELNTKLIKKLNSM 123
+ + V+ L Q + V GNTV + E Y I+Y L T + K+
Sbjct: 92 AGNDYPGSGDVLFRSLRQGS---VDGNTVDMDVERNAYVDNGIRYEASL-TMMTDKIKE- 146
Query: 124 VMHVVRG 130
VM + G
Sbjct: 147 VMAAING 153
>gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
Length = 130
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAH 75
S R + VSENI+NA TP YR K + FE + L+ + L SD ++ +H
Sbjct: 19 STRLRHVSENISNADTPGYRRKTV-PFEAVRDLSADVEKVSVGPVRLDRSDLEQVYDPSH 77
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL +G G+ V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 78 ----PLADDSG-HYKGSNVDLMIEIADAREAQRSYEANLKMFEQGRQMSSSLMDLLR 129
>gi|310764863|gb|ADP09813.1| Flagellar basal-body rod protein FlgB [Erwinia sp. Ejp617]
Length = 147
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE----TILNQNFL-----MART 57
F + + LS RQ++++ NIANA TP Y A+DI + T+ NQ+ ++ T
Sbjct: 21 FLFQQEALSLLSRRQEVLASNIANADTPGYMARDIDFSQQLKNTLANQSMAKSPVSLSLT 80
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
E H++ L +A+++ DQ + GNTV + E
Sbjct: 81 AEKHIEG--KGRLFDDANLLYRTPDQPSA---DGNTVDMDRE 117
>gi|315296704|gb|EFU55999.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 16-3]
Length = 138
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ P DQ + + GNTV + E + Y+++ ++ +M+
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRERTQFADNSLQYQMSLSVLSGQIKGMMN 132
Query: 127 VVR 129
V++
Sbjct: 133 VLQ 135
>gi|27380925|ref|NP_772454.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
USDA 110]
gi|27354091|dbj|BAC51079.1| flgB [Bradyrhizobium japonicum USDA 110]
Length = 134
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------NFLMARTHETHLKESD 66
W ERQ+++SEN++N+ TP +R +D+ E L++ M T +H+ S
Sbjct: 18 WHQERQRVLSENVSNSDTPKFRPRDL--VEPKLDRAGAVTGSMGPLAMTVTSASHMTPSG 75
Query: 67 -SSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+SG N + G + +GN V + E+ K+ + Y T L K
Sbjct: 76 AASGFDQN---------RNAGFETRPAGNAVNLEEEMMKAASNQMDYAAATSLYSK 122
>gi|259907631|ref|YP_002647987.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
gi|224963253|emb|CAX54737.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
gi|283477473|emb|CAY73389.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
12163]
Length = 135
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE----TILNQNFL-----MART 57
F + + LS RQ++++ NIANA TP Y A+DI + T+ NQ+ ++ T
Sbjct: 9 FLFQQEALSLLSRRQEVLASNIANADTPGYMARDIDFSQQLKNTLANQSMAKSPVSLSLT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
E H++ L +A+++ DQ + GNTV + E
Sbjct: 69 AEKHIEG--KGRLFDDANLLYRTPDQPSA---DGNTVDMDRE 105
>gi|323527716|ref|YP_004229869.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
gi|323384718|gb|ADX56809.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
Length = 163
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
RQ+++S NIANA TP Y+A+D+ A + LK++ ++G H ++
Sbjct: 22 RQELLSSNIANADTPGYKARDVD-----------FASSLAGALKKTGATG-HAASNTAAL 69
Query: 80 PLDQTTGVQVSGNTVGITNELYKSG 104
P+ Q GV SG ++ T + SG
Sbjct: 70 PMAQPAGV-TSGMSMAATAPGHMSG 93
>gi|332088753|gb|EGI93865.1| flagellar basal-body rod protein FlgB [Shigella boydii 5216-82]
Length = 138
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|148554192|ref|YP_001261774.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii RW1]
gi|148499382|gb|ABQ67636.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii RW1]
Length = 115
Score = 40.8 bits (94), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
F I + S+R +++ NIANA+TPNY+A+DI +F A + T +
Sbjct: 5 LFGIHGKALELRSQRLSMLASNIANAATPNYKARDI---------DFQKALSDAT---DG 52
Query: 66 DSSGLHWNAHV-IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S+ +AH+ PL+ + + GNTV ++ E + Y+ ++ V
Sbjct: 53 MSAAQAADAHIGYRVPLETS----LDGNTVELSTEQNQFAENALRYKTTLSFLEGRIGTV 108
Query: 125 MHVVRG 130
M ++G
Sbjct: 109 MQALKG 114
>gi|146293693|ref|YP_001184117.1| flagellar basal body rod protein FlgB [Shewanella putrefaciens
CN-32]
gi|145565383|gb|ABP76318.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
CN-32]
gi|319427092|gb|ADV55166.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens 200]
Length = 134
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS-------SFETILNQNFLMARTHETHLKESDSSGL 70
+ER +++S NIANA TP+Y+A+D+ + +N L HE H ++ +G
Sbjct: 20 AERAEVISSNIANADTPHYKARDVDFSAAMQAARSQQQQRNHLDITDHERHFGLAELTGQ 79
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ V P TG GNTV I E
Sbjct: 80 YVKFRVPNQP---DTG---DGNTVDIQQE 102
>gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
CD2]
gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
CD2]
Length = 137
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSSGLHWN 73
R +++++NIAN TP Y+ K + SFE L N +F RT H+ SS
Sbjct: 22 RNEVIAQNIANVDTPGYKRKTV-SFEEQLSDAISKNSSFKGRRTDPRHIAIGGSSADEVK 80
Query: 74 AHVIE--APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+V E + LD +++ GN V I NE+ + YE+ LI+++
Sbjct: 81 INVSEDKSSLD----MRLDGNNVDIENEMAQMAENNIRYEV---LIQRI 122
>gi|239826610|ref|YP_002949234.1| flagellar basal body rod protein FlgB [Geobacillus sp. WCH70]
gi|239806903|gb|ACS23968.1| flagellar basal-body rod protein FlgB [Geobacillus sp. WCH70]
Length = 130
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHL 62
F + Q ++ S R+K+++ NIAN TPNY+AK++ F L+ Q RT+ HL
Sbjct: 8 FMMLEQGLDYASLREKVIANNIANVDTPNYKAKEV-RFRAELDRALQPLEAKRTNPKHL 65
>gi|317406204|gb|EFV86453.1| flagellar basal-body rod protein [Achromobacter xylosoxidans C54]
Length = 135
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
FFQ Q ++RQ+++S NIANA TPNY+A+D
Sbjct: 11 FFQ---QSLGLRAQRQEVLSSNIANADTPNYKARDFD 44
>gi|16129036|ref|NP_415591.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|24112484|ref|NP_706994.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
301]
gi|26247213|ref|NP_753253.1| flagellar basal body rod protein FlgB [Escherichia coli CFT073]
gi|30062611|ref|NP_836782.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
2457T]
gi|74311635|ref|YP_310054.1| flagellar basal body rod protein FlgB [Shigella sonnei Ss046]
gi|89107919|ref|AP_001699.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. W3110]
gi|110641249|ref|YP_668979.1| flagellar basal body rod protein FlgB [Escherichia coli 536]
gi|110805091|ref|YP_688611.1| flagellar basal body rod protein FlgB [Shigella flexneri 5 str.
8401]
gi|157157889|ref|YP_001462307.1| flagellar basal body rod protein FlgB [Escherichia coli E24377A]
gi|157160600|ref|YP_001457918.1| flagellar basal body rod protein FlgB [Escherichia coli HS]
gi|170020531|ref|YP_001725485.1| flagellar basal body rod protein FlgB [Escherichia coli ATCC 8739]
gi|170080724|ref|YP_001730044.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|170683265|ref|YP_001744107.1| flagellar basal body rod protein FlgB [Escherichia coli SMS-3-5]
gi|187732438|ref|YP_001880755.1| flagellar basal body rod protein FlgB [Shigella boydii CDC 3083-94]
gi|191168464|ref|ZP_03030252.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
gi|191172447|ref|ZP_03033988.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
gi|193064567|ref|ZP_03045647.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
gi|193069459|ref|ZP_03050413.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
gi|194428410|ref|ZP_03060950.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
gi|194438104|ref|ZP_03070197.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
gi|209918327|ref|YP_002292411.1| flagellar basal body rod protein FlgB [Escherichia coli SE11]
gi|218553652|ref|YP_002386565.1| flagellar basal body rod protein FlgB [Escherichia coli IAI1]
gi|218694607|ref|YP_002402274.1| flagellar basal body rod protein FlgB [Escherichia coli 55989]
gi|218700424|ref|YP_002408053.1| flagellar basal body rod protein FlgB [Escherichia coli IAI39]
gi|218704481|ref|YP_002412000.1| flagellar basal body rod protein FlgB [Escherichia coli UMN026]
gi|227886569|ref|ZP_04004374.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 83972]
gi|238900327|ref|YP_002926123.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|256018670|ref|ZP_05432535.1| flagellar basal body rod protein FlgB [Shigella sp. D9]
gi|256023229|ref|ZP_05437094.1| flagellar basal body rod protein FlgB [Escherichia sp. 4_1_40B]
gi|260843313|ref|YP_003221091.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O103:H2 str. 12009]
gi|260854556|ref|YP_003228447.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O26:H11 str. 11368]
gi|260867436|ref|YP_003233838.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O111:H- str. 11128]
gi|293404357|ref|ZP_06648351.1| flgB [Escherichia coli FVEC1412]
gi|293409439|ref|ZP_06653015.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
gi|293414368|ref|ZP_06657017.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
gi|293433363|ref|ZP_06661791.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
gi|298380137|ref|ZP_06989742.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
gi|300816775|ref|ZP_07096995.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
gi|300821146|ref|ZP_07101295.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
gi|300899592|ref|ZP_07117831.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
gi|300902464|ref|ZP_07120446.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
gi|300918675|ref|ZP_07135256.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
gi|300922599|ref|ZP_07138699.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
gi|300928375|ref|ZP_07143909.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
gi|300950168|ref|ZP_07164113.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
gi|300954387|ref|ZP_07166841.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
gi|300974377|ref|ZP_07172589.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
gi|300982624|ref|ZP_07176208.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
gi|301023260|ref|ZP_07187057.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
gi|301029712|ref|ZP_07192766.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
gi|301051143|ref|ZP_07197973.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
gi|301304988|ref|ZP_07211090.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
gi|301328557|ref|ZP_07221618.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
gi|301644985|ref|ZP_07244951.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
gi|306814078|ref|ZP_07448251.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
gi|307137708|ref|ZP_07497064.1| flagellar basal body rod protein FlgB [Escherichia coli H736]
gi|307310149|ref|ZP_07589799.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
gi|309798067|ref|ZP_07692442.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
gi|312971210|ref|ZP_07785388.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
gi|331641617|ref|ZP_08342752.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|331652126|ref|ZP_08353145.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
gi|331662479|ref|ZP_08363402.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
gi|331667473|ref|ZP_08368337.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
gi|331672593|ref|ZP_08373382.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
gi|331676864|ref|ZP_08377560.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
gi|331682575|ref|ZP_08383194.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
gi|332279739|ref|ZP_08392152.1| flagellar component of cell-proximal portion of basal-body rod
[Shigella sp. D9]
gi|78100008|sp|P0ABX0|FLGB_ECOL6 RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|78100009|sp|P0ABW9|FLGB_ECOLI RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|78100010|sp|P0ABX1|FLGB_SHIFL RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|26107614|gb|AAN79813.1|AE016759_87 Flagellar basal-body rod protein flgB [Escherichia coli CFT073]
gi|1787313|gb|AAC74157.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|4062650|dbj|BAA35881.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K12 substr. W3110]
gi|24051370|gb|AAN42701.1| flagellar basal-body rod protein FlgB (proximal rod protein)
[Shigella flexneri 2a str. 301]
gi|30040857|gb|AAP16588.1| flagellar basal-body rod protein FlgB (proximal rod protein)
[Shigella flexneri 2a str. 2457T]
gi|73855112|gb|AAZ87819.1| flagellar protein for cell-proximal portion of basal-body rod
[Shigella sonnei Ss046]
gi|110342841|gb|ABG69078.1| flagellar basal-body rod protein FlgB [Escherichia coli 536]
gi|110614639|gb|ABF03306.1| Flagellar basal body protein [Shigella flexneri 5 str. 8401]
gi|157066280|gb|ABV05535.1| flagellar basal-body rod protein FlgB [Escherichia coli HS]
gi|157079919|gb|ABV19627.1| flagellar basal-body rod protein FlgB [Escherichia coli E24377A]
gi|169755459|gb|ACA78158.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC 8739]
gi|169888559|gb|ACB02266.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|170520983|gb|ACB19161.1| flagellar basal-body rod protein FlgB [Escherichia coli SMS-3-5]
gi|187429430|gb|ACD08704.1| flagellar basal-body rod protein FlgB [Shigella boydii CDC 3083-94]
gi|190901483|gb|EDV61244.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
gi|190907331|gb|EDV66929.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
gi|192927819|gb|EDV82433.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
gi|192957207|gb|EDV87656.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
gi|194413462|gb|EDX29744.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
gi|194423040|gb|EDX39034.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
gi|209911586|dbj|BAG76660.1| flagellar basal-body rod protein FlgB [Escherichia coli SE11]
gi|218351339|emb|CAU97045.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 55989]
gi|218360420|emb|CAQ97972.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI1]
gi|218370410|emb|CAR18217.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI39]
gi|218431578|emb|CAR12457.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli UMN026]
gi|227836773|gb|EEJ47239.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 83972]
gi|238861101|gb|ACR63099.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|257753205|dbj|BAI24707.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O26:H11 str. 11368]
gi|257758460|dbj|BAI29957.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O103:H2 str. 12009]
gi|257763792|dbj|BAI35287.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O111:H- str. 11128]
gi|260449787|gb|ACX40209.1| flagellar basal-body rod protein FlgB [Escherichia coli DH1]
gi|281600493|gb|ADA73477.1| Flagellar basal-body rod protein flgB [Shigella flexneri 2002017]
gi|284920896|emb|CBG33959.1| flagellar basal-body rod protein FlgB [Escherichia coli 042]
gi|291324182|gb|EFE63604.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
gi|291428943|gb|EFF01968.1| flgB [Escherichia coli FVEC1412]
gi|291434426|gb|EFF07399.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
gi|291469907|gb|EFF12391.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
gi|298279835|gb|EFI21343.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
gi|299877400|gb|EFI85611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
gi|300297164|gb|EFJ53549.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
gi|300307089|gb|EFJ61609.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
gi|300318623|gb|EFJ68407.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
gi|300356863|gb|EFJ72733.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
gi|300397105|gb|EFJ80643.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
gi|300405496|gb|EFJ89034.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
gi|300410620|gb|EFJ94158.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
gi|300414169|gb|EFJ97479.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
gi|300421076|gb|EFK04387.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
gi|300450515|gb|EFK14135.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
gi|300463633|gb|EFK27126.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
gi|300526445|gb|EFK47514.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
gi|300530549|gb|EFK51611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
gi|300839706|gb|EFK67466.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
gi|300844949|gb|EFK72709.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
gi|301076714|gb|EFK91520.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
gi|305852715|gb|EFM53163.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
gi|306909867|gb|EFN40361.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
gi|307553075|gb|ADN45850.1| flagellar basal-body rod protein FlgB [Escherichia coli ABU 83972]
gi|308118350|gb|EFO55612.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
gi|309701345|emb|CBJ00646.1| flagellar basal-body rod protein FlgB [Escherichia coli ETEC
H10407]
gi|310336412|gb|EFQ01598.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
gi|313650477|gb|EFS14884.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2a str.
2457T]
gi|315060351|gb|ADT74678.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli W]
gi|315135705|dbj|BAJ42864.1| flgB [Escherichia coli DH1]
gi|315253874|gb|EFU33842.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 85-1]
gi|315291067|gb|EFU50430.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 153-1]
gi|315618243|gb|EFU98833.1| flagellar basal-body rod protein FlgB [Escherichia coli 3431]
gi|320173526|gb|EFW48722.1| Flagellar basal-body rod protein FlgB [Shigella dysenteriae CDC
74-1112]
gi|320200969|gb|EFW75553.1| Flagellar basal-body rod protein FlgB [Escherichia coli EC4100B]
gi|323156880|gb|EFZ43014.1| flagellar basal-body rod protein FlgB [Escherichia coli EPECa14]
gi|323163755|gb|EFZ49574.1| flagellar basal-body rod protein FlgB [Escherichia coli E128010]
gi|323165581|gb|EFZ51368.1| flagellar basal-body rod protein FlgB [Shigella sonnei 53G]
gi|323174798|gb|EFZ60413.1| flagellar basal-body rod protein FlgB [Escherichia coli LT-68]
gi|323175696|gb|EFZ61290.1| flagellar basal-body rod protein FlgB [Escherichia coli 1180]
gi|323185804|gb|EFZ71165.1| flagellar basal-body rod protein FlgB [Escherichia coli 1357]
gi|323379088|gb|ADX51356.1| flagellar basal-body rod protein FlgB [Escherichia coli KO11]
gi|323937813|gb|EGB34077.1| flagellar basal-body rod protein FlgB [Escherichia coli E1520]
gi|323942542|gb|EGB38709.1| flagellar basal-body rod protein FlgB [Escherichia coli E482]
gi|323962672|gb|EGB58250.1| flagellar basal-body rod protein FlgB [Escherichia coli H489]
gi|323973338|gb|EGB68527.1| flagellar basal-body rod protein FlgB [Escherichia coli TA007]
gi|324013347|gb|EGB82566.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 60-1]
gi|324017423|gb|EGB86642.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 117-3]
gi|324117356|gb|EGC11263.1| flagellar basal-body rod protein FlgB [Escherichia coli E1167]
gi|331038415|gb|EGI10635.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|331050404|gb|EGI22462.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
gi|331060901|gb|EGI32865.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
gi|331065058|gb|EGI36953.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
gi|331070236|gb|EGI41602.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
gi|331075553|gb|EGI46851.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
gi|331080206|gb|EGI51385.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
gi|332102091|gb|EGJ05437.1| flagellar component of cell-proximal portion of basal-body rod
[Shigella sp. D9]
gi|332342619|gb|AEE55953.1| flagellar basal-body rod protein FlgB [Escherichia coli UMNK88]
gi|332758231|gb|EGJ88554.1| flagellar basal-body rod protein FlgB [Shigella flexneri 4343-70]
gi|332759615|gb|EGJ89920.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2747-71]
gi|332761417|gb|EGJ91701.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-671]
gi|332767679|gb|EGJ97872.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2930-71]
gi|333005507|gb|EGK25025.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-218]
gi|333008274|gb|EGK27748.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-272]
gi|333019331|gb|EGK38614.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-304]
gi|333019764|gb|EGK39036.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-227]
Length = 138
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
Length = 130
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 24 VSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
VSENI+NA TP YR K + SF+ + L + + L S+ ++ +H PL
Sbjct: 25 VSENISNADTPGYRRKTV-SFQAVRDLETDVSQVKVGRVSLDRSELEQVYDPSH----PL 79
Query: 82 DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
TG G+ V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 80 ADETG-HYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQMSSSLMDLLR 129
>gi|218689026|ref|YP_002397238.1| flagellar basal body rod protein FlgB [Escherichia coli ED1a]
gi|218426590|emb|CAR07418.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli ED1a]
gi|324007913|gb|EGB77132.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 57-2]
Length = 138
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTKHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|187918168|ref|YP_001883731.1| flagellar basal body rod protein FlgB [Borrelia hermsii DAH]
gi|119861016|gb|AAX16811.1| flagellar basal-body rod protein FlgB [Borrelia hermsii DAH]
Length = 135
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE-----TILNQ---NFLMARTHE 59
+A ++ + LS RQ ++++NIAN TPN++ + +FE ILN+ N + R ++
Sbjct: 9 DLAHRYLDVLSLRQSVIADNIANVDTPNFKRSKV-TFEAELERAILNERASNLSLIRGND 67
Query: 60 THLKESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
HL +G ++ P LD + ++ GN V I +E+ + +Y L T +
Sbjct: 68 KHL-----NGFKELGYLDVKPSRMLDYLSILKNDGNNVDIDSEMKNLIQNQMIYSLFTNI 122
>gi|85060038|ref|YP_455740.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
gi|84780558|dbj|BAE75335.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
Length = 130
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
N ++RQ I++ NI NA TP Y+A+DI F T L++ R L + +S H
Sbjct: 10 NLRAQRQSIIAANIVNADTPGYQARDI-DFSTELSKALTQGRASGETLALTTTSAAH 65
>gi|51246505|ref|YP_066389.1| flagellar basal-body rod protein (FlgB) [Desulfotalea psychrophila
LSv54]
gi|50877542|emb|CAG37382.1| related to flagellar basal-body rod protein (FlgB) [Desulfotalea
psychrophila LSv54]
Length = 137
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ +Q+++S NIANA TP Y A+ +FE L + + + T L S+ + A
Sbjct: 22 ASKQEVISSNIANAETPGYAARRF-NFEEDLQKALSL---NSTELTTSNPRHIPLGASTF 77
Query: 78 EAPLDQTT-------GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ L+ TT G+ S N+V + +E+ + LYE + +L+KK MV + + G
Sbjct: 78 -SDLEGTTTIVPDKHGIGDS-NSVSMRDEMLALSENQLLYETSAQLLKKKLGMVKYAISG 135
>gi|15801190|ref|NP_287207.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
EDL933]
gi|15830705|ref|NP_309478.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. Sakai]
gi|168747151|ref|ZP_02772173.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4113]
gi|168758635|ref|ZP_02783642.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4401]
gi|168764485|ref|ZP_02789492.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4501]
gi|168767732|ref|ZP_02792739.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4486]
gi|168773918|ref|ZP_02798925.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4196]
gi|168783603|ref|ZP_02808610.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4076]
gi|168790008|ref|ZP_02815015.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC869]
gi|168802018|ref|ZP_02827025.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC508]
gi|195935463|ref|ZP_03080845.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. EC4024]
gi|208809503|ref|ZP_03251840.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4206]
gi|208815239|ref|ZP_03256418.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4045]
gi|208822644|ref|ZP_03262963.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4042]
gi|209398681|ref|YP_002269919.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4115]
gi|217328423|ref|ZP_03444505.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. TW14588]
gi|254792455|ref|YP_003077292.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. TW14359]
gi|261227022|ref|ZP_05941303.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK2000]
gi|261256256|ref|ZP_05948789.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK966]
gi|291282093|ref|YP_003498911.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str.
CB9615]
gi|12514611|gb|AAG55819.1|AE005317_8 flagellar biosynthesis, cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. EDL933]
gi|13360915|dbj|BAB34874.1| flagellar rod protein FlgB [Escherichia coli O157:H7 str. Sakai]
gi|187770374|gb|EDU34218.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4196]
gi|188018167|gb|EDU56289.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4113]
gi|188999105|gb|EDU68091.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4076]
gi|189354564|gb|EDU72983.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4401]
gi|189363078|gb|EDU81497.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4486]
gi|189365535|gb|EDU83951.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4501]
gi|189370453|gb|EDU88869.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC869]
gi|189375929|gb|EDU94345.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC508]
gi|208729304|gb|EDZ78905.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4206]
gi|208731887|gb|EDZ80575.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4045]
gi|208738129|gb|EDZ85812.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4042]
gi|209160081|gb|ACI37514.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4115]
gi|209773408|gb|ACI85016.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773410|gb|ACI85017.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773412|gb|ACI85018.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773414|gb|ACI85019.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773416|gb|ACI85020.1| flagellar rod protein FlgB [Escherichia coli]
gi|217318850|gb|EEC27276.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. TW14588]
gi|254591855|gb|ACT71216.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. TW14359]
gi|290761966|gb|ADD55927.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str.
CB9615]
gi|320189756|gb|EFW64412.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC1212]
gi|320637524|gb|EFX07324.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. G5101]
gi|320643085|gb|EFX12286.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
str. 493-89]
gi|320648543|gb|EFX17198.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
str. H 2687]
gi|320653857|gb|EFX21931.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659337|gb|EFX26906.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664472|gb|EFX31623.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. LSU-61]
gi|326339295|gb|EGD63109.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. 1125]
gi|326344744|gb|EGD68492.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. 1044]
Length = 138
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRNATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|320179227|gb|EFW54185.1| Flagellar basal-body rod protein FlgB [Shigella boydii ATCC 9905]
Length = 138
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRISDQPS---LDGNTVDMDRE 105
>gi|188997546|ref|YP_001931797.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932613|gb|ACD67243.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 122
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+++ ER K++ NIANA+TP Y+ D+ +FE +LN ++ T E H++
Sbjct: 12 SSFYFERTKVIQGNIANANTPFYKPVDL-TFEEVLNYQTVLKTTDERHIQ 60
>gi|188493729|ref|ZP_03000999.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
gi|188488928|gb|EDU64031.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
Length = 138
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|154174839|ref|YP_001408540.1| flagellar basal body rod protein FlgB [Campylobacter curvus
525.92]
gi|112803089|gb|EAU00433.1| flagellar basal-body rod protein FlgB [Campylobacter curvus
525.92]
Length = 144
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 13/59 (22%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ------------NFLMARTHETHLKESD 66
RQK++S NIAN TP Y+A+DI +FE++L Q +A+T E H D
Sbjct: 23 RQKLISGNIANIDTPFYKARDI-NFESVLRQKADEIYNAKSSKKLELAKTDEAHFAAVD 80
>gi|323705449|ref|ZP_08117024.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535351|gb|EGB25127.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 136
Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMA-RTHETHLKESDSSGLHWNA 74
R +++S NIAN TP ++ D+ +FE+ILN N L T + H+ + +S +
Sbjct: 22 RNEVISNNIANVDTPGFKRSDV-NFESILNDAINSNKLTGFVTDKNHIPINSTSIDNIEP 80
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSMVMHVVRG 130
+++ D +T +++ GN V I E+ + Y+ L ++ +LNS++ + G
Sbjct: 81 QIVQ---DNSTSMRLDGNNVDIDVEMSNLAKNQLYYDALAQRVSGELNSLLTAIKDG 134
>gi|253773903|ref|YP_003036734.1| flagellar basal body rod protein FlgB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161179|ref|YP_003044287.1| flagellar basal body rod protein FlgB [Escherichia coli B str.
REL606]
gi|297516832|ref|ZP_06935218.1| flagellar basal body rod protein FlgB [Escherichia coli OP50]
gi|242376877|emb|CAQ31594.1| flagellar basal-body rod protein FlgB, subunit of Flagellar Motor
Complex and Flagellum [Escherichia coli BL21(DE3)]
gi|253324947|gb|ACT29549.1| flagellar basal-body rod protein FlgB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973080|gb|ACT38751.1| flagellar basal-body rod protein B [Escherichia coli B str. REL606]
gi|253977294|gb|ACT42964.1| flagellar basal-body rod protein B [Escherichia coli BL21(DE3)]
Length = 138
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVIQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|315180489|gb|ADT87403.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
Length = 104
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAH 75
+ +ER +++ NIANA TPNY+AKD+ SF ++ +KE+ + G+ +
Sbjct: 5 FRTERTSVLASNIANADTPNYKAKDV-SFNVVMT----------GLMKETSAIGIQTES- 52
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ P+ ++ GNTV + +E + Y+ + + +K S + + G
Sbjct: 53 LYRIPVQRSR----DGNTVELQSEQARFAQNNMEYQQSLQFLKSKISGLKRAIEG 103
>gi|24374761|ref|NP_718804.1| flagellar basal body rod protein FlgB [Shewanella oneidensis MR-1]
gi|24349427|gb|AAN56248.1|AE015762_5 flagellar basal-body rod protein FlgB [Shewanella oneidensis MR-1]
Length = 134
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN--------QNFLMARTHETHLKESDSSG 69
SER ++++ NIANA TP+Y+A+D+ F LN +N L E H + +G
Sbjct: 20 SERAEVLASNIANADTPHYKARDV-DFSAALNVAKTQQQQRNSLEMTGDEQHFGLAQLTG 78
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ V P TG GNTV + E Y+++ + S + +R
Sbjct: 79 QYVKFRVPNQP---DTG---DGNTVDVQQEQSAFMQNALEYQMSLGFLDSKFSGMKKALR 132
Query: 130 G 130
G
Sbjct: 133 G 133
>gi|241766917|ref|ZP_04764723.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii
2AN]
gi|241362621|gb|EER58469.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii
2AN]
Length = 147
Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
H N L +ERQ+ ++ NIANA TP Y A+D + ET+ + T HL
Sbjct: 12 HGNALMLRAERQRAIASNIANADTPGYVARDFNFAETLREATGAGSATSAAHL 64
>gi|91210225|ref|YP_540211.1| flagellar basal body rod protein FlgB [Escherichia coli UTI89]
gi|215486282|ref|YP_002328713.1| flagellar basal body rod protein FlgB [Escherichia coli O127:H6
str. E2348/69]
gi|218557955|ref|YP_002390868.1| flagellar basal body rod protein FlgB [Escherichia coli S88]
gi|237706941|ref|ZP_04537422.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
gi|312968853|ref|ZP_07783060.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
gi|331646331|ref|ZP_08347434.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
gi|331657135|ref|ZP_08358097.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
gi|91071799|gb|ABE06680.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli
UTI89]
gi|215264354|emb|CAS08711.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O127:H6 str. E2348/69]
gi|218364724|emb|CAR02414.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli S88]
gi|222032826|emb|CAP75565.1| flagellar basal-body rod protein flgB [Escherichia coli LF82]
gi|226898151|gb|EEH84410.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
gi|294489848|gb|ADE88604.1| flagellar basal-body rod protein FlgB [Escherichia coli IHE3034]
gi|307627457|gb|ADN71761.1| flagellar basal body rod protein FlgB [Escherichia coli UM146]
gi|312286255|gb|EFR14168.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
gi|312945635|gb|ADR26462.1| flagellar basal body rod protein FlgB [Escherichia coli O83:H1 str.
NRG 857C]
gi|315287372|gb|EFU46783.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 110-3]
gi|320196445|gb|EFW71068.1| Flagellar basal-body rod protein FlgB [Escherichia coli WV_060327]
gi|323190585|gb|EFZ75857.1| flagellar basal-body rod protein FlgB [Escherichia coli RN587/1]
gi|323957897|gb|EGB53609.1| flagellar basal-body rod protein FlgB [Escherichia coli H263]
gi|330910887|gb|EGH39397.1| flagellar basal-body rod protein FlgB [Escherichia coli AA86]
gi|331045083|gb|EGI17210.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
gi|331055383|gb|EGI27392.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
Length = 138
Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTKHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPSAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|325295410|ref|YP_004281924.1| flagellar basal-body rod protein FlgB [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065858|gb|ADY73865.1| flagellar basal-body rod protein FlgB [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 124
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A++ ER KI+ NIANA TP Y+ +D+ FE L + +T H D S
Sbjct: 15 ASFFLERSKIIQSNIANADTPFYKPRDL-VFEKELESQLKLKKTDPRHF---DVSQSRKK 70
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSMVMHV 127
++E G + N V + EL K +++ LN L K++ + + +
Sbjct: 71 FKIVE--FQNVNGYDM--NKVNVNEELAKLAESAIMFKSLNEVLKKEIGKLKLSI 121
>gi|281178182|dbj|BAI54512.1| flagellar basal-body rod protein FlgB [Escherichia coli SE15]
Length = 138
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAP--------LDQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPSAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|262276420|ref|ZP_06054229.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
gi|262220228|gb|EEY71544.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
Length = 131
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKES 65
++R + ++ N+ANA+TP Y+A+D+ FE L NF ++RT+E H+ S
Sbjct: 20 AQRAETLASNLANANTPGYKAQDV-DFEQALQAATSGANFGLSRTNERHIPAS 71
>gi|15615024|ref|NP_243327.1| flagellar basal body rod protein FlgB [Bacillus halodurans C-125]
gi|10175081|dbj|BAB06180.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
Length = 132
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS---SFETILNQNFLMAR-THETHLKESDSSGLHWN 73
S +Q+ +S+NIAN TPNY+AK ++ F+ L+ L A+ THE H+ + S G
Sbjct: 20 SLQQRAISQNIANVDTPNYKAKKVNFQKVFDEALSNTRLQAKQTHEKHIAFNRSQG---- 75
Query: 74 AHVIEAPLD--QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN---SMVMHVV 128
+P++ + T +GN V + E+ + + Y LI+++N + + V+
Sbjct: 76 ----SSPVETIRQTAYNHNGNNVDVDLEMTELAKNQIYY---NALIERVNGNFNSLQTVI 128
Query: 129 RG 130
RG
Sbjct: 129 RG 130
>gi|299822286|ref|ZP_07054172.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
gi|299815815|gb|EFI83053.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
Length = 121
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAH 75
+L ++S+NIANA T Y+AK+ SSFE L Q + T+ H+ +S+G N
Sbjct: 14 YLQSSNTLISDNIANAQTAGYKAKE-SSFEQNLQQAGSLRETNPKHMA-GESAG-SANVR 70
Query: 76 VIEAPLDQTTGVQVSGNTVGITNEL 100
+ E + V GN V +T+E+
Sbjct: 71 ITE----KAGSVNEDGNNVNVTDEM 91
>gi|206974988|ref|ZP_03235903.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
gi|206747007|gb|EDZ58399.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
Length = 135
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + +++ LK +
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNAADLKSNPDLYQ 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|288553068|ref|YP_003425003.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
gi|288544228|gb|ADC48111.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
Length = 131
Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHL 62
F++ + + RQ+ +S+NIANA TPNY+AK + SF+ LN+ N +T+ H+
Sbjct: 9 FRVLERGLDGSQLRQRAISDNIANAGTPNYQAKKV-SFKHTLNEAMGTNLEANKTNAKHI 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
D S + V P T +GN V I +E+ + + Y LI ++N
Sbjct: 68 ---DFSTTNTGTKVYTNP---HTTYNHNGNNVDIDHEMSELAKNQIYYN---ALIDRMNG 118
Query: 123 M---VMHVVRG 130
+ V+RG
Sbjct: 119 RFQSLQTVIRG 129
>gi|258511368|ref|YP_003184802.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478094|gb|ACV58413.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 134
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH---ET 60
+T F++ + + RQ + + NIANA TP Y+ +D+ +FET+L ++ E
Sbjct: 1 MTVFELLQSALDASTLRQAVYANNIANAGTPGYKRQDV-AFETLLQSALGSGDSNALGEA 59
Query: 61 HLK---ESDSSGLHWNAHVI-EAPLDQTTGVQVSGNTVGITNE--LYKSGHIKY--LYEL 112
+ + S L +VI E D +T V +GN V IT E L ++Y L +
Sbjct: 60 QIPIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRYDTLVQD 119
Query: 113 NTKLIKKLNSMVM 125
+ + +L + +M
Sbjct: 120 ISDRLDRLRTAIM 132
>gi|258514000|ref|YP_003190222.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
DSM 771]
gi|257777705|gb|ACV61599.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
DSM 771]
Length = 134
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 18/122 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS--GLHWNAH 75
S RQ++++ NIAN +TP ++ + +FE+IL +N T LK SDS G +
Sbjct: 20 SLRQRVIANNIANINTPGFKKSSV-AFESILKKNL---NTGRIPLKYSDSRHFGAADSLD 75
Query: 76 VIEAPL--DQTTGVQVSGNTVGITNELYK--SGHIKY---LYELNTKLIKKLNSMVMHVV 128
I + + TT ++ GN V + E+ + I Y + ELN +LNS+ + V+
Sbjct: 76 AINPTVVKENTTSMRSDGNNVDVEQEMVRLVLNTINYNADIQELNN----RLNSLGV-VI 130
Query: 129 RG 130
RG
Sbjct: 131 RG 132
>gi|218288291|ref|ZP_03492590.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius LAA1]
gi|218241650|gb|EED08823.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius LAA1]
Length = 134
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH---ET 60
+T F++ + + RQ + + NIANA TP Y+ +D+ +FET+L ++ E
Sbjct: 1 MTVFELLQSALDASTLRQAVYANNIANAGTPGYKRQDV-AFETLLQSALGSGDSNALGEA 59
Query: 61 HLK---ESDSSGLHWNAHVI-EAPLDQTTGVQVSGNTVGITNE--LYKSGHIKY 108
+ + S L +VI E D +T V +GN V IT E L ++Y
Sbjct: 60 QIPIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRY 113
>gi|68164549|gb|AAY87278.1| predicted flagellar proximal rod protein [uncultured bacterium
BAC17H8]
Length = 128
Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 32/41 (78%), Gaps = 4/41 (9%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDISSFETILNQ 50
HA L ++R KI++ NIANA+TPN++A+DI +F+ ++N+
Sbjct: 11 HATALTVRAKRNKILASNIANAATPNFKARDI-NFQALINK 50
>gi|228914322|ref|ZP_04077937.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228845316|gb|EEM90352.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 138
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 23/120 (19%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 14 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNE 73
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLI 117
HL ++ + A + QT +Q + GN+V +T E+ + LY ++ I
Sbjct: 74 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEMLDLMKVNQLYGISINAI 125
>gi|83647176|ref|YP_435611.1| flagellar basal body rod protein FlgB [Hahella chejuensis KCTC
2396]
gi|83635219|gb|ABC31186.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396]
Length = 131
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I Q N + R ++++ NIANA TP +RA+DI F+ +L Q A++ E L+ +
Sbjct: 11 IHEQALNVRTRRAEVLANNIANADTPGFRARDI-DFKAVLRQ----AKSIEDSLEVVTTD 65
Query: 69 GLHWNAHVIEAPLD------QTTGVQVSGNTVGITNELYK 102
H I+ P + Q + GNTV E+ +
Sbjct: 66 DAHM---AIKTPAEGALLYRQPLQPSIDGNTVDTQTEIVQ 102
>gi|170289254|ref|YP_001739492.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
gi|281412856|ref|YP_003346935.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
RKU-10]
gi|170176757|gb|ACB09809.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
gi|281373959|gb|ADA67521.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
RKU-10]
Length = 127
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHETHLKESDSSGLHWNAHV 76
RQ + S NIAN STP Y+ K + +FE +L ++ + +++T+E HL S S V
Sbjct: 19 RQNVHSLNIANVSTPGYKRKYV-AFEELLKESEMKLKLSKTNEKHLIGSKS--------V 69
Query: 77 IEAP--LDQTTGVQVSGNTVGITNEL 100
+E +D TT ++ GN V I E+
Sbjct: 70 VEPRVLVDNTTTMRNDGNNVDIDYEM 95
>gi|148256780|ref|YP_001241365.1| flagellar basal body rod protein FlgB [Bradyrhizobium sp. BTAi1]
gi|146408953|gb|ABQ37459.1| Putative flagellar basal-body rod protein flgB (putative proximal
rod protein) [Bradyrhizobium sp. BTAi1]
Length = 135
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI--SSFETILN-----QNFLMARTHETHLKESDSS 68
W ERQ++++EN++N+ TPN++ KD+ F+ +ART H+ +
Sbjct: 18 WHQERQRVLAENVSNSDTPNFKPKDLVEPKFDATGQAVGGFAPLSLARTSTAHIAPASGE 77
Query: 69 GLHWNAHVIEAPLDQTTGV----QVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
A DQ V + +GN V + E+ K + Y T L K
Sbjct: 78 ---------SASFDQNRKVGFLTRPAGNAVSLEEEMLKVSANQMDYAAATSLYGK 123
>gi|170734377|ref|YP_001766324.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
MC0-3]
gi|169817619|gb|ACA92202.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
MC0-3]
Length = 162
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 18/100 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ T+ AR+ LK+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDVDFASTL-------ARS----LKQ-- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
+SG ++ + P+ Q GV T G++ +GH+
Sbjct: 56 TSGGLAPSNAAQLPMTQPAGV-----TSGMSMVSTAAGHM 90
>gi|296283243|ref|ZP_06861241.1| flagellar basal body rod protein FlgB [Citromicrobium bathyomarinum
JL354]
Length = 124
Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 17 LSERQKIVSENIANASTPNYRAKDIS--SFETILNQNF----------LMARTHETHLKE 64
LS+RQ+++++NIAN TP Y+A+++ SF +++ + + + ++
Sbjct: 4 LSDRQQVIAQNIANGDTPGYKAREVEAPSFAGMVDASGAGRVARPTVQISSEMRALGARQ 63
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
SS + + +++E D GN V + ++ K G ++ + T L +K
Sbjct: 64 QSSSAIILDENIVETKPD--------GNNVTLEEQVLKLGAVQSEFTALTNLYRK 110
>gi|146281768|ref|YP_001171921.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri
A1501]
gi|145569973|gb|ABP79079.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri
A1501]
Length = 134
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMARTHETHL 62
+ S+R ++++ NIANA TPNY+A+D+ F ++L + F RT + H+
Sbjct: 18 FRSQRAEVLANNIANADTPNYKARDL-DFGSVLAEQSAQGQGGFAATRTSDRHI 70
>gi|149195180|ref|ZP_01872271.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
TB-2]
gi|149134732|gb|EDM23217.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
TB-2]
Length = 142
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL----NQNF-------LMA 55
F I Q ++ RQ +++ NIANA TP YR KDI FE L N+ F +A
Sbjct: 9 FGIMEQALHYRKIRQDMIASNIANADTPFYRPKDI-RFEDALQEEINKKFNKPSKKLELA 67
Query: 56 RTHETHLKESD 66
+T+ HL+ D
Sbjct: 68 KTNPMHLEPKD 78
>gi|117621022|ref|YP_857346.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562429|gb|ABK39377.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 132
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS----SFETILNQNFLMARTHETHLK-ESDSSGLHW 72
S+R +++S NIANA TP ++A+DI+ E Q F +A T E H + D+ G+
Sbjct: 20 SKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHFALQMDAPGVTQ 79
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ PL TG GNTV + E
Sbjct: 80 YRN----PLQPDTG---DGNTVDVQQE 99
>gi|330830306|ref|YP_004393258.1| flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
gi|328805442|gb|AEB50641.1| Flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
Length = 132
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETHLK-ESDSSGLHW 72
++R +++S NIANA TP ++A+DI+ + + Q F +A T E H D+ G
Sbjct: 20 AKRAEVLSSNIANADTPGFKARDINFAQALQEAQSHQGFGLATTSEKHFALNMDAPGTVQ 79
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
PL TG GNTV + E +S ++ E T L
Sbjct: 80 ----YRNPLQPDTG---DGNTVDVQQE--RSEFLRNSLEYQTSL 114
>gi|217959227|ref|YP_002337775.1| flagellar basal body rod protein FlgB [Bacillus cereus AH187]
gi|229138443|ref|ZP_04267032.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
gi|217063551|gb|ACJ77801.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH187]
gi|228644980|gb|EEL01223.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
Length = 135
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + +++ LK +
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNTADLKTNADLYQ 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|325274805|ref|ZP_08140832.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51]
gi|324100050|gb|EGB97869.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51]
Length = 136
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 9/56 (16%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLK 63
+ ++R ++++ NIANA TPNY+A+D+ F ++L + F M RT+ H++
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDM-DFSSVLAAETSKQQSGRFAMERTNSRHIE 72
>gi|311992323|gb|ADQ26735.1| proximal rod protein [Aeromonas hydrophila]
Length = 131
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS----SFETILNQNFLMARTHETHLK-ESDSSGLHW 72
S+R +++S NIANA TP ++A+DI+ E Q F +A T E H + D+ G+
Sbjct: 19 SKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHFALQMDAPGVTQ 78
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
PL TG GNTV + E +S ++ E T L + +NS + +++
Sbjct: 79 ----YRNPLQPDTG---DGNTVDVQQE--RSEFLRNSLEYQTSL-EFMNSKISGLLK 125
>gi|290474969|ref|YP_003467853.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
bovienii SS-2004]
gi|289174286|emb|CBJ81076.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus bovienii SS-2004]
Length = 138
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV-- 76
+RQ+I+S NIANA TP Y+A+DI F L Q R +K +S H A
Sbjct: 21 QRQEILSANIANADTPGYQARDI-DFAAQLKQVMAEGRVTGNGMKLRLASDRHIPAQSQN 79
Query: 77 -IEAPLDQTTGVQ--VSGNTVGITNEL--YKSGHIKYLYELNTKLIKKLNSMV 124
+E L Q + GNTV + E + +KY EL T +L SM+
Sbjct: 80 RLEMDLLYRVPYQTAMDGNTVDMDVERSHFADNSLKYQAEL-TMTNSQLKSMM 131
>gi|254460063|ref|ZP_05073479.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
HTCC2083]
gi|206676652|gb|EDZ41139.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
HTCC2083]
Length = 124
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKES-- 65
+ HA L Q + ++N+ANA TP+++AK ++ F ++ + A T E HL +
Sbjct: 6 ASHAGRL---QVVAAQNMANADTPDFKAKTLTPFRELIATDAHTASQRATRERHLNGNLP 62
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ +G+ + +D+T +GN+V I +E+ +S + K ++
Sbjct: 63 EQNGI----QTAQVSVDETAQSDPNGNSVAIEDEILRSVNAKRQHD 104
>gi|324325761|gb|ADY21021.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 135
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 69 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|228964726|ref|ZP_04125833.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228794976|gb|EEM42475.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 152
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 26 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 85
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTK 115
+E HL ++ + A + QT +Q + GN+V +T E+ LY ++
Sbjct: 86 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVN 137
Query: 116 LI 117
I
Sbjct: 138 AI 139
>gi|170703093|ref|ZP_02893913.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
IOP40-10]
gi|171321835|ref|ZP_02910736.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
MEX-5]
gi|170131990|gb|EDT00498.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
IOP40-10]
gi|171092873|gb|EDT38125.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
MEX-5]
Length = 162
Score = 40.0 bits (92), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F + L ++ +TH
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSL-----KQTH----- 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
G ++ + P+ Q GV SG T+ T + +G K +
Sbjct: 58 --GGLAPSNAAQLPMAQPAGV-ASGMTMVSTAPGHMAGAAKLI 97
>gi|146307872|ref|YP_001188337.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina ymp]
gi|145576073|gb|ABP85605.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp]
Length = 135
Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHET 60
I Q + ++R ++++ NIANA TPNY+A+D+ F ++L + N +ART
Sbjct: 11 IHEQALGFRAQRAEVLANNIANADTPNYKARDL-DFASVLAEQNAKQQRGNVALARTDGR 69
Query: 61 HL 62
H+
Sbjct: 70 HI 71
>gi|75675325|ref|YP_317746.1| flagellar basal body rod protein FlgB [Nitrobacter winogradskyi
Nb-255]
gi|74420195|gb|ABA04394.1| Flagellar basal body rod protein [Nitrobacter winogradskyi
Nb-255]
Length = 135
Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI 41
W ERQ++++ENIAN+ TPN+R D+
Sbjct: 18 WHQERQRVLAENIANSDTPNFRPHDL 43
>gi|92116945|ref|YP_576674.1| flagellar basal body rod protein FlgB [Nitrobacter hamburgensis
X14]
gi|91799839|gb|ABE62214.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
Length = 135
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI 41
W ERQ++++ENIAN+ TPN++ +D+
Sbjct: 18 WHQERQRVLAENIANSDTPNFKPRDL 43
>gi|85716542|ref|ZP_01047512.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
gi|85696543|gb|EAQ34431.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
Length = 120
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI 41
W ERQ++++ENIAN+ TPN+R D+
Sbjct: 3 WHQERQRVLAENIANSDTPNFRPHDL 28
>gi|47566126|ref|ZP_00237164.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
gi|47557043|gb|EAL15373.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
Length = 135
Score = 40.0 bits (92), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + +++ LK +
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNTADLKTNPDLYQ 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|228907376|ref|ZP_04071234.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
gi|228852237|gb|EEM97033.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
Length = 135
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMKKSSALYKNNAADLKSNPDLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 69 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|71278001|ref|YP_268219.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
34H]
gi|71143741|gb|AAZ24214.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
34H]
Length = 132
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL----NQNFLMARTHETHL 62
FQ+ +Q S+R ++++ NIANA TP Y+AK + + + Q M+RT++ H
Sbjct: 9 FQLHTQGMLIRSQRAEVIASNIANADTPGYKAKGLDFNQALAQAANKQKMGMSRTNDKHF 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKY 108
D N+ P + TG GNTV + E LY ++Y
Sbjct: 69 ---DIRTELNNSVDYRVPNNPDTG---DGNTVDVQVERNLYLKNSMEY 110
>gi|326939357|gb|AEA15253.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 135
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTK 115
+E HL ++ + A + QT +Q + GN+V +T E+ LY ++
Sbjct: 69 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVN 120
Query: 116 LI 117
I
Sbjct: 121 AI 122
>gi|228938857|ref|ZP_04101457.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971738|ref|ZP_04132359.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978347|ref|ZP_04138724.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
gi|228781364|gb|EEM29565.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
gi|228787828|gb|EEM35786.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820706|gb|EEM66731.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 147
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 21 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 80
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTK 115
+E HL ++ + A + QT +Q + GN+V +T E+ LY ++
Sbjct: 81 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVN 132
Query: 116 LI 117
I
Sbjct: 133 AI 134
>gi|148546703|ref|YP_001266805.1| flagellar basal body rod protein FlgB [Pseudomonas putida F1]
gi|148510761|gb|ABQ77621.1| flagellar basal-body rod protein FlgB [Pseudomonas putida F1]
gi|313497758|gb|ADR59124.1| FlgB [Pseudomonas putida BIRD-1]
Length = 136
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 9/56 (16%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLK 63
+ ++R ++++ NIANA TPNY+A+D+ F ++L F M RT+ H++
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDM-DFSSVLAAETSKQQGGRFAMDRTNSRHIE 72
>gi|30019788|ref|NP_831419.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 14579]
gi|49480943|ref|YP_035863.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52143715|ref|YP_083114.1| flagellar basal body rod protein FlgB [Bacillus cereus E33L]
gi|196033492|ref|ZP_03100904.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
gi|296502343|ref|YP_003664043.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
BMB171]
gi|29895333|gb|AAP08620.1| Flagellar basal-body rod protein flgB [Bacillus cereus ATCC 14579]
gi|49332499|gb|AAT63145.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51977184|gb|AAU18734.1| flagellar basal-body rod protein [Bacillus cereus E33L]
gi|195993926|gb|EDX57882.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
gi|296323395|gb|ADH06323.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
BMB171]
Length = 135
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 69 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|228920454|ref|ZP_04083799.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229178152|ref|ZP_04305523.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
gi|228605282|gb|EEK62732.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
gi|228839084|gb|EEM84380.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 138
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 12 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 71
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTK 115
+E HL ++ + A + QT +Q + GN+V +T E+ LY ++
Sbjct: 72 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISVN 123
Query: 116 LI 117
I
Sbjct: 124 AI 125
>gi|33596137|ref|NP_883780.1| flagellar basal body rod protein FlgB [Bordetella parapertussis
12822]
gi|33601538|ref|NP_889098.1| flagellar basal body rod protein FlgB [Bordetella bronchiseptica
RB50]
gi|33573140|emb|CAE36787.1| flagellar basal-body rod protein FlgB [Bordetella parapertussis]
gi|33575974|emb|CAE33053.1| flagellar basal-body rod protein FlgB [Bordetella bronchiseptica
RB50]
Length = 135
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
FFQ Q ++RQ+++S NIANA TPNY+A+D
Sbjct: 11 FFQ---QSIALRAQRQEVLSSNIANADTPNYKARDF 43
>gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
Length = 130
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL--NQNFLMARTHETHLKESDSSGLHWNAH 75
++R + SENIANA TP YR K +SFE I+ Q+ T L +++ + +H
Sbjct: 19 TDRLRFTSENIANADTPGYRRK-TTSFEAIVEQGQSTGAVTTGPMVLDKTELDRVFDPSH 77
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
P+ +G G V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 78 ----PMADASGY-YQGTNVDLLIEIADAREAQRSYEANLKMFDQSRQMSSSLMELLR 129
>gi|228958023|ref|ZP_04119759.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228801648|gb|EEM48529.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 166
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 40 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 99
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 100 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 136
>gi|229058377|ref|ZP_04196761.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
gi|228719886|gb|EEL71476.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
Length = 161
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N + + + + LK S+
Sbjct: 35 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEKMNMSSALYKKNAADLK---SNPD 90
Query: 71 HWNAHVIEAPLD---------QTTGVQVS--GNTVGITNEL 100
+ +V+ P QT +Q + GN+V +T E+
Sbjct: 91 LYQTNVMHLPTANTKNTYAKIQTKSMQTNKDGNSVDVTTEM 131
>gi|192360466|ref|YP_001982403.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
Ueda107]
gi|190686631|gb|ACE84309.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
Ueda107]
Length = 133
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSSG 69
+ SER +++ N+AN TPNY+A+D+ F+ L Q F +A T+E H+ S G
Sbjct: 18 FRSERASVLANNLANIDTPNYKARDV-DFKQALGQQMKKAERFDVATTNEKHIPASTFVG 76
Query: 70 L 70
+
Sbjct: 77 V 77
>gi|188581885|ref|YP_001925330.1| flagellar basal body rod protein FlgB [Methylobacterium populi
BJ001]
gi|179345383|gb|ACB80795.1| putative flagellar basal-body rod protein [Methylobacterium populi
BJ001]
Length = 138
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFL--------MARTHETHLKES 65
W RQ +++EN+ANA +R +D++ S T+ + +ART H+ +
Sbjct: 18 WHQARQALLAENVANADMAGFRPRDLAEPSAATVGLAAPVGAAVGGDGIARTDAAHIGLT 77
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S+G + + + V+ SGN V + E+ K+G + Y+L L +K
Sbjct: 78 ASAGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQSDYQLVASLYQK 126
>gi|114570488|ref|YP_757168.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
gi|114340950|gb|ABI66230.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
Length = 150
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MQP--ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE 45
M+P + + Q ++ S+RQ++++ENIANA+TP Y +DI E
Sbjct: 1 MRPDDVPVLALLRQSMSFHSDRQQVIAENIANANTPGYTPRDIDESE 47
>gi|33592476|ref|NP_880120.1| flagellar basal body rod protein FlgB [Bordetella pertussis
Tohama I]
gi|33572122|emb|CAE41664.1| flagellar basal-body rod protein FlgB [Bordetella pertussis
Tohama I]
gi|332381893|gb|AEE66740.1| flagellar basal body rod protein FlgB [Bordetella pertussis CS]
Length = 135
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
FFQ Q ++RQ+++S NIANA TPNY+A+D
Sbjct: 11 FFQ---QSIALRAQRQEVLSSNIANADTPNYKARDF 43
>gi|222100201|ref|YP_002534769.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM
4359]
gi|221572591|gb|ACM23403.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM
4359]
Length = 137
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHETHLKESDSSGLHWNAHV 76
RQKI S NIAN STP Y+ K + +FE L ++ + +ART E HL S V
Sbjct: 29 RQKIHSLNIANVSTPGYKRKYV-AFEEFLKESKMRLELARTSEKHLGGSQ--------RV 79
Query: 77 IEAPL--DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+E + T ++ GN V I E+ + Y++ T+L+
Sbjct: 80 VEPRVLTQNDTTMRNDGNNVDIDYEMVQLVKNGLRYQVLTRLM 122
>gi|304438469|ref|ZP_07398409.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304368552|gb|EFM22237.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 139
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 20 RQKIVSENIANASTPNY-----RAKDISSFETILNQNFLM--ARTHETHLKESDSSGLHW 72
R +++S NIAN +TPN+ R +D+ E L + LM RTH+ HL + H
Sbjct: 24 RHEVLSNNIANVNTPNFKRSHVRFEDLLKKELGLEDDPLMPVVRTHDRHLPLAYRGKAHG 83
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNEL 100
VIE + TT +++ GN V I E+
Sbjct: 84 ---VIEQ--ENTTNMRLDGNNVDIDVEM 106
>gi|260779350|ref|ZP_05888242.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus
ATCC BAA-450]
gi|260605514|gb|EEX31809.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus
ATCC BAA-450]
Length = 120
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|206970568|ref|ZP_03231520.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
gi|218232483|ref|YP_002366428.1| flagellar basal body rod protein FlgB [Bacillus cereus B4264]
gi|229069295|ref|ZP_04202585.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
gi|229078925|ref|ZP_04211477.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
gi|206734204|gb|EDZ51374.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
gi|218160440|gb|ACK60432.1| flagellar basal-body rod protein FlgB [Bacillus cereus B4264]
gi|228704339|gb|EEL56773.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
gi|228713782|gb|EEL65667.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
Length = 135
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 69 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|163939549|ref|YP_001644433.1| flagellar basal body rod protein FlgB [Bacillus weihenstephanensis
KBAB4]
gi|163861746|gb|ABY42805.1| flagellar basal-body rod protein [Bacillus weihenstephanensis
KBAB4]
Length = 135
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N + + + + LK S+
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEKMNMSSGLYKKNAADLK---SNPD 64
Query: 71 HWNAHVIEAPLD---------QTTGVQVS--GNTVGITNEL 100
+ +V+ P QT +Q + GN+V +T E+
Sbjct: 65 LYQTNVMHLPTANTKNTYAKIQTKSMQTNKDGNSVDVTTEM 105
>gi|83719578|ref|YP_440798.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
E264]
gi|167617582|ref|ZP_02386213.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
Bt4]
gi|257140551|ref|ZP_05588813.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
E264]
gi|83653403|gb|ABC37466.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
E264]
Length = 163
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
F Q + + RQ+++S NIANA TP YRA+D+ T+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFSSTL 49
>gi|296282282|ref|ZP_06860280.1| flagellar basal-body rod protein FlgB [Citromicrobium bathyomarinum
JL354]
Length = 115
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++R ++ NIANA TP Y+A+DI F L + L S+S G A V
Sbjct: 17 AQRMAVLGSNIANAGTPGYKARDI-DFGAAL----------QARLAGSESEGAAQRATVY 65
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P T + GNTV + E Y +K + +RG
Sbjct: 66 RIP----TMASLDGNTVEMGTEQAAFAENAVAYTATLGFLKGRVETLTRAIRG 114
>gi|153831645|ref|ZP_01984312.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
gi|156976138|ref|YP_001447044.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC
BAA-1116]
gi|269960113|ref|ZP_06174489.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
gi|148872155|gb|EDL70972.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
gi|156527732|gb|ABU72817.1| hypothetical protein VIBHAR_04909 [Vibrio harveyi ATCC BAA-1116]
gi|269835084|gb|EEZ89167.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
Length = 120
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|254227980|ref|ZP_04921410.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|262396038|ref|YP_003287891.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|151939476|gb|EDN58304.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|262339632|gb|ACY53426.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
Length = 120
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|167579485|ref|ZP_02372359.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
TXDOH]
Length = 163
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
F Q + + RQ+++S NIANA TP YRA+D+ T+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFSSTL 49
>gi|2494517|sp|P70910|FLGB_BORHE RecName: Full=Flagellar basal-body rod protein flgB
gi|1621620|gb|AAB51473.1| flagellar rod protein FlgB [Borrelia hermsii]
Length = 135
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL---KE 64
+A ++ + LS RQ ++++NIAN TPN++ + +FE L + L R L +
Sbjct: 9 DLAHRYLDVLSLRQSVIADNIANVDTPNFKRSKV-TFEAELERAILNERASNLSLIRGND 67
Query: 65 SDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ +G ++ P LD + ++ GN V I +E+ + +Y L T +
Sbjct: 68 KNLNGFKELGYLDVKPSRMLDYLSILKNDGNNVDIDSEMKNLIQNQMIYSLFTNI 122
>gi|172061975|ref|YP_001809627.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria
MC40-6]
gi|171994492|gb|ACB65411.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
MC40-6]
Length = 162
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F + L ++ +TH
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSL-----KQTH----- 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
G ++ + P+ Q GV SG T+ T + +G K +
Sbjct: 58 --GGLAPSNAAQLPMAQPAGV-ASGMTMVSTAPGHMAGTAKLI 97
>gi|228933027|ref|ZP_04095890.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229090704|ref|ZP_04221937.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
gi|228692646|gb|EEL46372.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
gi|228826628|gb|EEM72399.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 138
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 12 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 71
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 72 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 108
>gi|91224202|ref|ZP_01259465.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
gi|269965641|ref|ZP_06179754.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
gi|91191113|gb|EAS77379.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
gi|269829709|gb|EEZ83945.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
Length = 120
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|15895434|ref|NP_348783.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
ATCC 824]
gi|15025158|gb|AAK80123.1|AE007716_12 Flagellar basal-body rod protein FlgB [Clostridium acetobutylicum
ATCC 824]
gi|325509580|gb|ADZ21216.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
EA 2018]
Length = 134
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKE 64
+ + S+ + SER K +S NIAN +T +Y+ +S + + N N M RT H+ +
Sbjct: 14 YGLLSKGLDATSERGKAISNNIANVNTKDYKRYYVSFEDNLKNSMDNLGMERTDSRHIND 73
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH--IKYLYELNTKLIKKLNS 122
S G I+ D + V GN V I +E+ ++Y Y L ++ ++N
Sbjct: 74 GASFG------DIQLKQDTASSVNEDGNNVDIDSEMSNDAQNTLEY-YTLINQISSRIN- 125
Query: 123 MVMHVVRG 130
M +V+ G
Sbjct: 126 MERNVING 133
>gi|94263246|ref|ZP_01287063.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
gi|94264090|ref|ZP_01287889.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
gi|93455506|gb|EAT05696.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
gi|93456464|gb|EAT06584.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
Length = 128
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFLMARTHETHL- 62
++ Q N +ERQ ++ NIAN TP Y+ +D + E ++ +ART+ H+
Sbjct: 11 IEVMHQALNLRNERQGLIQSNIANLETPGYKVQDFPFEKAMERAMSGRGQLARTNPGHIG 70
Query: 63 ---KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
E+ G + A E P+D + E+ K + +Y+ ++LI K
Sbjct: 71 VGPSEAARPGQYRQA---ERPVD-------------LEEEMLKLSENQLMYQATSQLITK 114
>gi|28900119|ref|NP_799774.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
RIMD 2210633]
gi|153837054|ref|ZP_01989721.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ3810]
gi|260365769|ref|ZP_05778265.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
K5030]
gi|260880691|ref|ZP_05893046.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AN-5034]
gi|260897703|ref|ZP_05906199.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
Peru-466]
gi|260899386|ref|ZP_05907781.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ4037]
gi|1272365|gb|AAA97473.1| LfgB [Vibrio parahaemolyticus]
gi|28808402|dbj|BAC61607.1| LfgB [Vibrio parahaemolyticus RIMD 2210633]
gi|149749642|gb|EDM60387.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ3810]
gi|308086275|gb|EFO35970.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
Peru-466]
gi|308091690|gb|EFO41385.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AN-5034]
gi|308109180|gb|EFO46720.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ4037]
gi|308115060|gb|EFO52600.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
K5030]
gi|328470098|gb|EGF41009.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
10329]
Length = 120
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|323492341|ref|ZP_08097494.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
gi|323313388|gb|EGA66499.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
Length = 120
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|228952123|ref|ZP_04114218.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229043497|ref|ZP_04191207.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
gi|229109200|ref|ZP_04238799.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
gi|229127069|ref|ZP_04256068.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
gi|229144355|ref|ZP_04272761.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
gi|228639142|gb|EEK95566.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
gi|228656422|gb|EEL12261.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
gi|228674210|gb|EEL29455.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
gi|228725875|gb|EEL77122.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
gi|228807655|gb|EEM54179.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 147
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 21 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 80
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 81 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 117
>gi|229149945|ref|ZP_04278173.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
gi|228633626|gb|EEK90227.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
Length = 147
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 21 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 80
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 81 NEMHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 117
>gi|206558965|ref|YP_002229725.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
J2315]
gi|198035002|emb|CAR50874.1| flagellar basal-body rod protein FlgB (putative proximal rod
protein) [Burkholderia cenocepacia J2315]
Length = 162
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ T+ AR+ LK+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDVDFASTL-------ARS----LKQ-- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
+SG ++ + P+ Q GV T G++ GH+
Sbjct: 56 TSGGLAPSNAAQLPMTQPAGV-----TSGMSMVSTAPGHM 90
>gi|170722895|ref|YP_001750583.1| flagellar basal body rod protein FlgB [Pseudomonas putida W619]
gi|169760898|gb|ACA74214.1| flagellar basal-body rod protein FlgB [Pseudomonas putida W619]
Length = 136
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 10/57 (17%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL---------NQNFLMARTHETHLK 63
+ ++R ++++ NIANA TPNY+A+D+ F ++L F M RT+ H++
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDM-DFSSVLAAESQKQQSGGRFAMDRTNSRHIE 73
>gi|113969603|ref|YP_733396.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-4]
gi|114046835|ref|YP_737385.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-7]
gi|113884287|gb|ABI38339.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-4]
gi|113888277|gb|ABI42328.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-7]
Length = 135
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN--------QNFL-MARTHETHLKESDSS 68
+ER +++S NIANA TP+Y+A+D+ F LN +N L M + H + +
Sbjct: 20 AERAEVISSNIANADTPHYKARDV-DFSAALNVAKTQQQQRNSLEMTGDEQQHFGLAQLT 78
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G + V P TG GNTV I E Y+++ + S + +
Sbjct: 79 GQYVKFRVPNQP---DTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSGMKKAL 132
Query: 129 RG 130
RG
Sbjct: 133 RG 134
>gi|322379368|ref|ZP_08053739.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
gi|322380861|ref|ZP_08054951.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
gi|321146712|gb|EFX41522.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
gi|321148186|gb|EFX42715.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
Length = 140
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 28/139 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------NQNFLM 54
+ + + ++ S RQ +++ NIAN TP YR +D+ FET+L +Q +
Sbjct: 7 YPLVYEAMDYRSLRQDLIASNIANVDTPFYRPRDV-DFETMLAHKKAEVFDHKKDQILQL 65
Query: 55 ARTHETH----LKESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
A+T++ H L ES + L + + H+ + GN+V + E + G +
Sbjct: 66 AKTNKRHLSPGLSESQKATLFFRDGHL----------AKNDGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y T +KK +V + +
Sbjct: 116 YLALTTALKKHRGIVNYAI 134
>gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
Length = 130
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--RTHETHLKESD 66
+A+ + R + VSENIAN TP YR K I +FE ++ Q T L +++
Sbjct: 10 VATSGMKAQASRLRHVSENIANTDTPGYRRKAI-TFEELVTQGRTTGAVETGPLRLDQTE 68
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ +H PL TG +G+ V + E+ + + YE N K+ ++ M
Sbjct: 69 LKRVYDPSH----PLADDTG-HYNGSNVNLLIEIADAREAQRSYEANLKMFDQVRQM 120
>gi|330445345|ref|ZP_08308997.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489536|dbj|GAA03494.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 131
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 18/105 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA--- 74
++R + ++ NIANA+TP Y+AKDI F+ LN A T ++ S ++G H NA
Sbjct: 20 AKRAETLASNIANANTPGYKAKDI-DFQRALN-----AATSGANIGLSRTNGRHINATTQ 73
Query: 75 ----HVIEAPLDQTTGVQVSGNTVG--ITNELYKSGHIKYLYELN 113
P TG GNTV + ++ I+Y L+
Sbjct: 74 VTGEQKFRVPTQPDTG---DGNTVDAQLEQNMFMQNSIEYQASLD 115
>gi|229166584|ref|ZP_04294336.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
gi|228616838|gb|EEK73911.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
Length = 161
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N + + + + LK S+
Sbjct: 35 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNMSSALYKKNAADLK---SNPD 90
Query: 71 HWNAHVIEAPLD---------QTTGVQVS--GNTVGITNEL 100
+ +V+ P QT +Q + GN+V +T E+
Sbjct: 91 LYQTNVMHLPTANTKNTYAKIQTKSMQTNKDGNSVDVTTEM 131
>gi|300722685|ref|YP_003711975.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
nematophila ATCC 19061]
gi|297629192|emb|CBJ89788.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus nematophila ATCC 19061]
Length = 138
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
FQ + ++RQ+I+S NIANA TP Y+A+DI
Sbjct: 9 FQFRQEALALRNQRQEILSANIANADTPGYQARDID 44
>gi|91976171|ref|YP_568830.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisB5]
gi|91682627|gb|ABE38929.1| putative flagellar basal-body rod protein FlgB [Rhodopseudomonas
palustris BisB5]
Length = 136
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI 41
W ERQK++SEN++N+ TPN++ +D+
Sbjct: 18 WHQERQKVLSENVSNSDTPNFQPRDL 43
>gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
BS107]
gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
2.10]
gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
2.10]
gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
BS107]
Length = 130
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R + VSENI+NA TP YR K + FE + L + L SD + +H
Sbjct: 21 RLRHVSENISNADTPGYRRKTV-PFEAVRDLRSDVEKVEVGPVRLDRSDLEQVFDPSH-- 77
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL +G G+ V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 78 --PLADESG-HYEGSNVDLMIEIADAREAQRSYEANLKMFEQGRQMSSSLMDLLR 129
>gi|258622485|ref|ZP_05717507.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
gi|258625237|ref|ZP_05720149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
gi|262173351|ref|ZP_06041028.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
gi|258582484|gb|EEW07321.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
gi|258585185|gb|EEW09912.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
gi|261890709|gb|EEY36696.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
Length = 120
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ 51
>gi|315452788|ref|YP_004073058.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
49179]
gi|315131840|emb|CBY82468.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
49179]
Length = 140
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH--ETHLKE 64
+ + + ++ + RQ +++ NIAN TP YR KD+ FET+L H + HLK
Sbjct: 7 YPLVYKAMDYRALRQDLIASNIANVDTPFYRPKDL-DFETMLAHKKAEVFDHQKDKHLKL 65
Query: 65 SDSSGLHWNAHVIE---APLDQTTG--VQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++++ H E A + G + GN+V I E + G +Y T +KK
Sbjct: 66 AETNPRHLEPKDFEDNKATIFFRDGHLAKNDGNSVDIDIETSEMGKNSTMYLALTTALKK 125
Query: 120 LNSMVMHVV 128
+V + +
Sbjct: 126 HRGIVNYAI 134
>gi|229160707|ref|ZP_04288699.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
gi|228622722|gb|EEK79556.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
Length = 154
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + LN N + +T
Sbjct: 28 SHYMNYLVTKRNTVSSNIANANTPGYQAQDVTFAEQMNKSSALYKSNSSDLNSNPDLYQT 87
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL + + A + QT +Q++ GN+V ++ E+
Sbjct: 88 NEMHLPTVNMKNTY--AKI------QTKSMQMNKDGNSVDVSTEM 124
>gi|218896676|ref|YP_002445087.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
gi|218543629|gb|ACK96023.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
Length = 135
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + + + LK +
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKNNAADLKSNPDLYQ 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNMKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|304316911|ref|YP_003852056.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778413|gb|ADL68972.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 136
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMA-RTHETHLKESDSSGLHWNA 74
R +++S NIAN TP ++ D+ +FE+ILN N L T + H+ + +S +
Sbjct: 22 RDEVISNNIANVDTPGFKRSDV-NFESILNDAINSNKLAGFVTDKNHIPINSTSIDNIEP 80
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSMVMHVVRG 130
+++ D +T +++ GN V I E+ + Y L ++ +LNS++ + G
Sbjct: 81 QIVQ---DNSTSMRLDGNNVDIDVEMSNLAKNQLYYSALAQRVSGELNSILTAIKDG 134
>gi|166712065|ref|ZP_02243272.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 133
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 13 HANWLS---ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLK 63
H + L+ +R K+++ N++N TP Y+AKD+ +FE L LM T H
Sbjct: 12 HGDALALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTDAKHYA 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNS 122
GL N I DQ + + GNTV E G Y + ++ K+ S
Sbjct: 71 VGGGGGL--NPFQITRESDQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRS 125
Query: 123 MVMHVV 128
M+ +
Sbjct: 126 MLTAIT 131
>gi|107023956|ref|YP_622283.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia AU
1054]
gi|116691043|ref|YP_836666.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
HI2424]
gi|105894145|gb|ABF77310.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia AU
1054]
gi|116649132|gb|ABK09773.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
HI2424]
Length = 162
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ T+ AR+ LK+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDVDFASTL-------ARS----LKQ-- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
+SG ++ + P+ Q GV T G++ GH+
Sbjct: 56 TSGGLAPSNAAQLPMAQPAGV-----TSGMSMVSTAPGHM 90
>gi|114777414|ref|ZP_01452411.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
PV-1]
gi|114552196|gb|EAU54698.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
PV-1]
Length = 133
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQN------FLMARTHETHLKESDSSGLHWNA 74
Q +++ NIANA TPN+ A D SF L++ T+ H+ +++ GL +
Sbjct: 22 QGVLASNIANADTPNFHA-DKRSFSDFLSELQTGKSIGAATTTNPMHISDTNEPGLSGSI 80
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMVMHVVRG 130
L Q + GN V + ++ + +YEL +LIK L+S+ + G
Sbjct: 81 ------LGQQPSASMDGNNVDMQQQMASMSENQLMYELTMRLIKGDLSSLANTIKEG 131
>gi|332533178|ref|ZP_08409047.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037460|gb|EGI73914.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
haloplanktis ANT/505]
Length = 135
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMARTHETHLKESDSSGL 70
S+R ++++ NIANA TP Y+AKDI F + L M RT++ H+ G
Sbjct: 20 SQRAELIATNIANADTPGYKAKDI-DFASALKAARSTQQSGNTMVRTNDKHI----GGGT 74
Query: 71 H--WNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYEL 112
H ++ P TG GN+V I E LY ++Y L
Sbjct: 75 HSMGSSESFRLPNQSDTG---DGNSVDIQVERNLYTQNAMEYQASL 117
>gi|229121295|ref|ZP_04250526.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
gi|228662140|gb|EEL17749.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
Length = 135
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E I L N + +T+E
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQINKSSALYKNNAADLKGNPDLYQTNE 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 71 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|254246962|ref|ZP_04940283.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
PC184]
gi|124871738|gb|EAY63454.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
PC184]
Length = 172
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ T+ AR+ LK+
Sbjct: 19 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDVDFASTL-------ARS----LKQ-- 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
+SG ++ + P+ Q GV T G++ GH+
Sbjct: 66 TSGGLAPSNAAQLPMAQPAGV-----TSGMSMVSTAPGHM 100
>gi|87119679|ref|ZP_01075576.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121]
gi|86165155|gb|EAQ66423.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121]
Length = 133
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 4 ITFFQIASQHANWL---SERQKIVSENIANASTPNYRAKDIS 42
I+F + H +L S+R +++ NIANA TPNY+A+DIS
Sbjct: 3 ISFESAFAGHDKFLKFRSDRSAVLANNIANADTPNYKARDIS 44
>gi|253702511|ref|YP_003023700.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21]
gi|251777361|gb|ACT19942.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21]
Length = 139
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH--ETHLKES 65
++ + + ++RQ +++ N+AN TP Y D+ SFE L T +H +
Sbjct: 12 ELLGKSLDLRAKRQSVIASNLANVETPGYAPSDL-SFEGRLKDALKQGATPAAPSHPRHI 70
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
G + ++ L Q TG + GN V + +E+ + + +Y +L+ K
Sbjct: 71 PLKGGSVSLDRVQGDLIQVTGSNMGPDGNGVELESEMGRMAENQIMYNATVQLLAKKFEG 130
Query: 124 VMHVVRG 130
+ +RG
Sbjct: 131 LKQAIRG 137
>gi|229132556|ref|ZP_04261405.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
gi|228650902|gb|EEL06888.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
Length = 161
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N + + + + LK S+
Sbjct: 35 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNMSSALYKKNTADLK---SNPD 90
Query: 71 HWNAHVIEAPLD---------QTTGVQVS--GNTVGITNEL 100
+ +V+ P QT +Q + GN+V +T E+
Sbjct: 91 LYQTNVMHLPTANTKNTYAKIQTKSMQTNKDGNSVDVTTEM 131
>gi|225863602|ref|YP_002748980.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
gi|229183935|ref|ZP_04311151.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
gi|225786134|gb|ACO26351.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
gi|228599587|gb|EEK57191.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
Length = 135
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 23/104 (22%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTH 58
++ N+L ++ VS NIANA+TP Y+A+D++ E I L N + +T+
Sbjct: 10 RYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQINISSALYKNNAADLKSNPDLYQTN 69
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
E HL + + A + QT +Q + GN+V +T E+
Sbjct: 70 EMHLPTVNMKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|91776306|ref|YP_546062.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
KT]
gi|91710293|gb|ABE50221.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
KT]
Length = 131
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-------THETHLKESDSSGL 70
+RQ++++ NIANA TP Y+A+DI +F Q A TH H+ + S
Sbjct: 19 GQRQELLAANIANADTPGYKARDI-NFADTFKQALTGASGGLKADTTHPGHIPATAS--- 74
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
H N + + + + V GNTV + E + YE + +I ++ ++G
Sbjct: 75 HQNGVLYRSIIQGS----VDGNTVDMDVERTQFADNALRYEASATMISGQIKKLLSAIQG 130
>gi|315127356|ref|YP_004069359.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas sp. SM9913]
gi|315015870|gb|ADT69208.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas sp. SM9913]
Length = 136
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQNF---LMARTHETHLKESDSSGLH 71
S+R ++++ NIANA TP Y+AKDI S+ +T + M RT+E H+ S
Sbjct: 20 SQRAEMLATNIANADTPGYKAKDIDFASALKTAKSNQLSGNTMVRTNEKHIAGGTRS--V 77
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKY 108
+ + P TG GN+V I E LY ++Y
Sbjct: 78 GSNELFRTPNQTDTG---DGNSVDIQVERNLYTQNAMEY 113
>gi|21242730|ref|NP_642312.1| flagellar basal body rod protein FlgB [Xanthomonas axonopodis pv.
citri str. 306]
gi|78047589|ref|YP_363764.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294625271|ref|ZP_06703910.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|294664588|ref|ZP_06729929.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|21108206|gb|AAM36848.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
gi|78036019|emb|CAJ23710.1| flagellar basal body protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292600445|gb|EFF44543.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292605645|gb|EFF48955.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 133
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 13 HANWLS---ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLK 63
H + L+ +R K+++ N++N TP Y+AKD+ +FE L L+ T H +
Sbjct: 12 HGDALTLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLLQTTDAKHYE 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNS 122
+GL+ EA DQ + + GNTV E G Y + ++ K+ S
Sbjct: 71 VGGGAGLNPFQFTREA--DQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRS 125
Query: 123 MVMHVV 128
M+ +
Sbjct: 126 MLTAIT 131
>gi|15644116|ref|NP_229165.1| flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
gi|148270548|ref|YP_001245008.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila RKU-1]
gi|4981924|gb|AAD36434.1|AE001790_6 flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
gi|147736092|gb|ABQ47432.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila RKU-1]
Length = 127
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHETH 61
T F Q + RQ + S NIAN STP Y+ K + +FE +L ++ + +++T+E H
Sbjct: 4 TNFYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYV-AFEELLKESEMKLKLSKTNEKH 62
Query: 62 LKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
L S +V+E +D TT ++ GN V I E+ + Y++ T+L+
Sbjct: 63 LIGS--------KNVVEPRVLVDNTTTMRNDGNNVDIDYEMVQLVKNGLRYQVLTRLM 112
>gi|154250381|ref|YP_001411206.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
Rt17-B1]
gi|154154317|gb|ABS61549.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
Rt17-B1]
Length = 131
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHETHLKES 65
+RQ+I ++NIANA TP Y+ K I +FE L ++ + MART E HL S
Sbjct: 22 KRQEIHAQNIANAETPGYKRKYI-AFEEYLQESKMKLQMARTSEKHLPSS 70
>gi|294084421|ref|YP_003551179.1| flagellar basal-body rod protein FlgB [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663994|gb|ADE39095.1| flagellar basal-body rod protein FlgB [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 128
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE 45
+ Q+ S + S+R I++ NIANA+TPN++A+DI +FE
Sbjct: 7 YLQVHSAALSLRSKRNDILASNIANAATPNFKARDI-NFE 45
>gi|209521586|ref|ZP_03270284.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
gi|209497969|gb|EDZ98126.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
Length = 165
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
F Q + + RQ+++S NIANA TP Y+A+DI
Sbjct: 9 FAFGRQAMDVRAYRQELLSSNIANADTPGYKARDI 43
>gi|37525838|ref|NP_929182.1| flagellar basal body rod protein FlgB [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36785267|emb|CAE14208.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
protein) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 137
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
F + + S RQ+I+S NIANA TP Y+A+DI F T L + R
Sbjct: 9 FHFQQEALSLRSRRQEILSANIANADTPGYQARDI-DFATQLKKTIAHGR 57
>gi|237653586|ref|YP_002889900.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
gi|237624833|gb|ACR01523.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
Length = 134
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILN---QNFLMART 57
I F Q A N + RQ++++ NIANA TP+Y+A+D+ ++ + LN + MA T
Sbjct: 9 IQFHQTA---LNLQAHRQQLIASNIANADTPHYKARDVDFRAALQGALNASREGVQMATT 65
Query: 58 HETHLKESDSSGL 70
H+ + + L
Sbjct: 66 QAGHIGSAPAPAL 78
>gi|228926779|ref|ZP_04089847.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832892|gb|EEM78461.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 138
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 12 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQT 71
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 72 NEMHLPTVNTKNKY--AKI------QTKSMQTNKDGNSVDVTTEM 108
>gi|253996322|ref|YP_003048386.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis JLW8]
gi|253983001|gb|ACT47859.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis JLW8]
Length = 135
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDI-------SSFETILNQN-FLMARTHETH 61
H N L +RQ++++ NIANA TPNY+A+D+ S+ N+ F +T + H
Sbjct: 12 HQNALRVRGQRQELIAANIANADTPNYKARDLDFGAAMKSAMAGAANKEAFNTNKTSDKH 71
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKY---LYELNTKL 116
L SS + P+ Q + V GNTV + E + I+Y + +N +L
Sbjct: 72 LDGIPSS---IGGGAMFRPIVQGS---VDGNTVDMDVERNQFADNAIRYEASIIMINGQL 125
Query: 117 IKKL 120
K L
Sbjct: 126 KKML 129
>gi|157362948|ref|YP_001469715.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
gi|157313552|gb|ABV32651.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
Length = 125
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMARTHETHLKE 64
FQI + RQ I ++NIANA TP Y+ K + FE +LNQ + M T E H++
Sbjct: 6 FQIIKTAMDVAILRQNIFAQNIANAETPGYKRKYV-VFEELLNQAMSMKMKTTDENHIQT 64
Query: 65 SDSS 68
S+
Sbjct: 65 EKSA 68
>gi|300696910|ref|YP_003747571.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum CFBP2957]
gi|299073634|emb|CBJ53154.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum CFBP2957]
Length = 153
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMART 57
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M T
Sbjct: 8 LFSFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKATGQQSGSSLPMTAT 66
Query: 58 HETHLKESDSSG-----------LHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSG 104
HL + + A ++ ++ T Q + GNTV + E +
Sbjct: 67 AAGHLTAAGAPAADVVPMQASLSAQSQADALQGEVEYRTSQQPSIDGNTVDMDGERMRFA 126
Query: 105 HIKYLYELNTKLI-KKLNSMVMHV 127
YE + ++ K+ SM+ +
Sbjct: 127 DNTVRYEADLSIVTAKIKSMLAAI 150
>gi|298530646|ref|ZP_07018048.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510020|gb|EFI33924.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
thiodismutans ASO3-1]
Length = 136
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHL 62
Q+ S+ + ERQ +VS N+AN TP Y+A+ + E + L+ MART H+
Sbjct: 10 QLTSRVLDMRLERQNVVSSNLANVKTPGYQARRVEFEEQLQSALNLDARGKMARTDPGHV 69
Query: 63 KES-DSSGLHWNAHVIEA 79
+ D G +NA I++
Sbjct: 70 SGAFDPQG--FNAQFIKS 85
>gi|292900255|ref|YP_003539624.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291200103|emb|CBJ47229.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
Length = 135
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE----TILNQNFL-----MART 57
F + + LS RQ++++ NIANA TP Y A+DI + T+ NQ+ ++ T
Sbjct: 9 FLFQQEALSLLSRRQEVLASNIANADTPGYLARDIDFSQQLKNTLANQSMAKSPVSLSLT 68
Query: 58 HETHLKESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNE 99
E H++ G + +A+++ DQ + GNTV + E
Sbjct: 69 AEKHIE---GKGRPFDDANLLYRTPDQPSA---DGNTVDMDRE 105
>gi|172057891|ref|YP_001814351.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
255-15]
gi|171990412|gb|ACB61334.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
255-15]
Length = 120
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 21/114 (18%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMA-RTHETHLKESDSSGLHWNAHVIEA 79
QK++S NIAN TP Y+AK + F +L+ M+ + H T + + ++E
Sbjct: 22 QKVISTNIANVDTPGYKAKRV-VFSDVLDSEMKMSLKRHAT---------IGTSGSIVE- 70
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN---SMVMHVVRG 130
Q++ ++ GN V I E+ + + YE L+++LN S + V+RG
Sbjct: 71 ---QSSAMRNDGNGVDIDLEMSELSRNQIEYE---ALVEQLNRKFSGIQSVIRG 118
>gi|292489136|ref|YP_003532023.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430]
gi|291554570|emb|CBA22186.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430]
gi|312173294|emb|CBX81549.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
BAA-2158]
Length = 147
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE----TILNQNFL-----MART 57
F + + LS RQ++++ NIANA TP Y A+DI + T+ NQ+ ++ T
Sbjct: 21 FLFQQEALSLLSRRQEVLASNIANADTPGYLARDIDFSQQLKNTLANQSMAKSPVSLSLT 80
Query: 58 HETHLKESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNE 99
E H++ G + +A+++ DQ + GNTV + E
Sbjct: 81 AEKHIE---GKGRPFDDANLLYRTPDQPSA---DGNTVDMDRE 117
>gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
Length = 130
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-----ETHLKESDSSGLHW 72
++R + VSENIANA TP YR K + SFE + M+ H L SD + ++
Sbjct: 19 AQRLRHVSENIANADTPGYRRKTV-SFEA---RAAGMSGVHHVETGRVRLDRSDLARVYE 74
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
+H P+ TG S N V + E+ + + YE N K+ ++++S +M ++R
Sbjct: 75 PSH----PMADETGHFDSSN-VQLVIEIADAREAQRSYEANLKMFDQARQMSSSLMDLLR 129
>gi|326796600|ref|YP_004314420.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
MMB-1]
gi|326547364|gb|ADZ92584.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
MMB-1]
Length = 131
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 4 ITFFQIASQHANWL---SERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
ITF Q + H L S R +++ NIANA TP+Y+A+DI +F+++L + +A
Sbjct: 3 ITFQQAFAGHDETLKFRSARASVLANNIANADTPHYKARDI-TFDSMLQSEVKCLDLAGN 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ H+ S + G +A + P + + GNTV + E
Sbjct: 62 DDQHIDGSSTFGSD-DALLYRNP----SQPSLDGNTVDMQRE 98
>gi|325288805|ref|YP_004264986.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus
DSM 8271]
gi|324964206|gb|ADY54985.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus
DSM 8271]
Length = 132
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDSS 68
+ LS R K++++NIAN TPN++ D+ +FE +L +Q M + HL
Sbjct: 18 DGLSLRNKVLADNIANVDTPNFKKSDV-NFEAVLQEAIGEDQALPMKMSLPGHLP---GV 73
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
G V++ D +T ++ GN V + E+ K
Sbjct: 74 GASAGTVVLQ---DNSTTIRNDGNNVDVDLEMSK 104
>gi|295678061|ref|YP_003606585.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
gi|295437904|gb|ADG17074.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
Length = 166
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
F Q + + RQ+++S NIANA TP Y+A+DI
Sbjct: 9 FAFGRQAMDVRAYRQELLSSNIANADTPGYKARDI 43
>gi|261856363|ref|YP_003263646.1| flagellar basal-body rod protein FlgB [Halothiobacillus
neapolitanus c2]
gi|261836832|gb|ACX96599.1| flagellar basal-body rod protein FlgB [Halothiobacillus
neapolitanus c2]
Length = 132
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
+ F I Q + S+R I++ NIANA TPN++A+D+S
Sbjct: 4 SIFGIHGQALVFQSQRMGILASNIANADTPNFKARDLS 41
>gi|221636051|ref|YP_002523927.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
5159]
gi|221157824|gb|ACM06942.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
5159]
Length = 138
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFL---MARTHETHLKESDSS 68
+ L+ RQ++ + N+ANA TP +R + + + +LN F + RT H+ + SS
Sbjct: 16 DALALRQQVTASNVANAETPGFRGQAVRFEDLLQAMLNGTFARLPLVRTDSRHIAVTASS 75
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V+E T + GN V I E+ Y ++++ + +M+ +
Sbjct: 76 PSALQPEVVEL---TGTRYRPDGNNVDIEREMGLLAETTLRYSAVSEVLARRLAMLRAMA 132
Query: 129 RG 130
G
Sbjct: 133 SG 134
>gi|126730139|ref|ZP_01745951.1| flagellar basal-body rod protein; FlgB [Sagittula stellata E-37]
gi|126709519|gb|EBA08573.1| flagellar basal-body rod protein; FlgB [Sagittula stellata E-37]
Length = 125
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-THET 60
Q + F+ A A +Q ++N+ANA TP Y +K ++ F + + Q R T E
Sbjct: 3 QNLDVFRTAMAMARHAGVQQAYSAQNMANADTPGYHSKAVAEFSSSVRQGLSGQRATRER 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
HL S S H E ++ T +GNTV + E+
Sbjct: 63 HLNGSTS-------HAPEI-TERDTPADPNGNTVSVEEEM 94
>gi|149184204|ref|ZP_01862522.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
gi|148831524|gb|EDL49957.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
Length = 115
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S+R ++ NIANA+TP Y+A+DI A + L+ +++SG A
Sbjct: 17 SQRLGVLGSNIANAATPGYKARDID-----------FAAALDARLEGAEASGATTGAIKY 65
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P T + GNTV + E Y ++ V +RG
Sbjct: 66 RVP----TMASLDGNTVEMATEQAAFAENAVAYSATLNFLRGRVETVTRAIRG 114
>gi|332294890|ref|YP_004436813.1| flagellar basal-body rod protein FlgB [Thermodesulfobium
narugense DSM 14796]
gi|332177993|gb|AEE13682.1| flagellar basal-body rod protein FlgB [Thermodesulfobium
narugense DSM 14796]
Length = 134
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQ---NFLMARTHET 60
F+I + +R +++++NIANA TP Y++ DI S + L + N + RT+
Sbjct: 8 FKILGFGLSGAYKRNEVLAQNIANADTPGYKSYDINFMSELKKALEEDQDNIPLKRTNPL 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
H+ SD+ L+ + V++ + G ++GN V
Sbjct: 68 HM--SDTPNLNKDFKVVK----RNEGTYINGNDV 95
>gi|224534383|ref|ZP_03674961.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S]
gi|224514485|gb|EEF84801.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S]
Length = 135
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KESDS--S 68
++ + LS RQ +VS+NIAN TPN++ I SFE L + L + +L K SD S
Sbjct: 13 RYLDVLSLRQSVVSDNIANVDTPNFKRSKI-SFEAELEKALLNKDKNNLNLIKSSDKHLS 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNEL 100
L + P LD + + +GN V I +E+
Sbjct: 72 RLKSPEYSDVKPHRVLDHFSTMNNNGNNVDIDSEI 106
>gi|300114802|ref|YP_003761377.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
C-113]
gi|299540739|gb|ADJ29056.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
C-113]
Length = 131
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLKES 65
S R +I++ N+AN TP Y+A+DI ++ + Q + TH HL S
Sbjct: 20 SRRAEILAANLANGDTPGYKARDIDFKAALQQAQGQGLSLQATHAGHLSHS 70
>gi|297617135|ref|YP_003702294.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus
DSM 12680]
gi|297144972|gb|ADI01729.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus
DSM 12680]
Length = 138
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 9 IASQHANWLSE-------RQKIVSENIANASTPNYRAKDISSFETILN------QNFLMA 55
I +Q N L + RQK+++ N+AN TP Y+A +++ E + N + +
Sbjct: 6 IGNQRINVLEKALDGAMLRQKVIANNLANVDTPGYKAMEVTFEEQLKNSMKEAGSEYNLK 65
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK-SGHIKYLYELNT 114
TH HL+ + S +V E + GN+V I E+ + S ++ Y ++T
Sbjct: 66 TTHPRHLQIPNISSFQVGINVAEG-----YTFRNDGNSVDIDREMARLSKNVVYYNAVST 120
Query: 115 KLIKKLNSMVMHVVRG 130
+ ++ + M + G
Sbjct: 121 SMSEEFKLLRMAITEG 136
>gi|75761145|ref|ZP_00741137.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228900325|ref|ZP_04064555.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222]
gi|74491373|gb|EAO54597.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228859360|gb|EEN03790.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222]
Length = 138
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + + + LK +
Sbjct: 12 SHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKNNAADLKSNPDLYQ 70
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 71 TNEMHLPTVNMKNTYAKI-QTKSMQTNKDGNSVDVTTEM 108
>gi|302037601|ref|YP_003797923.1| flagellar basal-body rod protein FlgB [Candidatus Nitrospira
defluvii]
gi|300605665|emb|CBK41998.1| Flagellar basal-body rod protein FlgB [Candidatus Nitrospira
defluvii]
Length = 135
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN 49
Q+ S+ + RQ++++ NIAN TP YRAKD++ + + N
Sbjct: 8 IQLLSRSLDLRGARQQVIAANIANEETPKYRAKDLNFGQALAN 50
>gi|197120202|ref|YP_002140629.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem]
gi|197089562|gb|ACH40833.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem]
Length = 139
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET--HLKESDSSGLHWNAH 75
++RQ +++ N+AN TP Y D+ SFE L T H + G +
Sbjct: 22 AKRQSVIASNLANVETPGYTPSDL-SFEGRLKDALKQGATPTATPHPRHIPLKGASVSLD 80
Query: 76 VIEAPLDQTTGVQVS--GNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
++ L Q TG + GN V + +E+ + + +Y +L+ K + +RG
Sbjct: 81 RVQGDLVQVTGSNMGPDGNGVELESEMGRMAENQIMYNATVQLLAKKFEGLKQAIRG 137
>gi|229172390|ref|ZP_04299949.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
gi|228610861|gb|EEK68124.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
Length = 135
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNVADLKSNPDLYQTNE 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 71 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|196039148|ref|ZP_03106455.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
gi|196030293|gb|EDX68893.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
Length = 135
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
+ N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + + + LK + GL+
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKNNAADLKS--NPGLYQ 67
Query: 73 ---------NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
N A + QT +Q + GN+V +T E+
Sbjct: 68 TNEMHLPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|208435439|ref|YP_002267105.1| flagellar basal-body rod protein [Helicobacter pylori G27]
gi|208433368|gb|ACI28239.1| flagellar basal-body rod protein [Helicobacter pylori G27]
Length = 140
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ S RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FDLVYKALDYRSLRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|124268257|ref|YP_001022261.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
gi|124261032|gb|ABM96026.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
Length = 150
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 21/24 (87%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
SERQ++++ NIANA TP Y+A+D+
Sbjct: 36 SERQRLIASNIANADTPGYQARDM 59
>gi|115353121|ref|YP_774960.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria AMMD]
gi|115283109|gb|ABI88626.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria AMMD]
Length = 162
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ T+ AR+ LK++
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDVDFASTL-------ARS----LKQAH 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
NA + P+ Q GV SG T+ T + +G K +
Sbjct: 58 GGLAPSNA--AQLPMAQPAGV-ASGMTMVSTAPGHMAGTAKLI 97
>gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
Length = 129
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R ++VSENIAN TP YR K ++ T + + L + ++ +H
Sbjct: 21 RLRVVSENIANVDTPGYRRKQLNFAVTRGDSSLARVEPGRMDLSRTPLEEVYDPSH---- 76
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL TG + G+ V + EL + + YE N K+ ++++S ++ ++R
Sbjct: 77 PLADETGKYL-GSNVDLMIELADAREAQRSYEANLKMFDQTRQMSSALLDLLR 128
>gi|228984827|ref|ZP_04144999.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775025|gb|EEM23419.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 135
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNE 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 71 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|196045109|ref|ZP_03112342.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
gi|218902858|ref|YP_002450692.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
gi|228945346|ref|ZP_04107701.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|300117338|ref|ZP_07055128.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
gi|301053280|ref|YP_003791491.1| flagellar basal body rod protein [Bacillus anthracis CI]
gi|196024111|gb|EDX62785.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
gi|218535408|gb|ACK87806.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
gi|228814318|gb|EEM60584.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|298725173|gb|EFI65825.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
gi|300375449|gb|ADK04353.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
str. CI]
Length = 135
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNE 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 71 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|330818588|ref|YP_004362293.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli BSR3]
gi|327370981|gb|AEA62337.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli BSR3]
Length = 162
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIANA TP Y+A+D+ F L + LK+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFGATLGR----------ALKQQA 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
NA + PL Q GV SG T+ T + SG +
Sbjct: 58 GQATTDNATRL--PLAQPAGV-TSGMTLVSTAPGHMSGDTR 95
>gi|325927872|ref|ZP_08189096.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
91-118]
gi|325541712|gb|EGD13230.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
91-118]
Length = 179
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLKESDSSGLHW 72
+R K+++ N++N TP Y+AKD+ +FE L L+ T H + +GL+
Sbjct: 67 QRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLLQTTDAKHYEVGGGAGLNP 125
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMVMHVV 128
EA DQ + + GNTV E G Y + ++ K+ SM+ +
Sbjct: 126 FQFTREA--DQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTAIT 177
>gi|114320054|ref|YP_741737.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226448|gb|ABI56247.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
MLHE-1]
Length = 134
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETHLKESDSSGLHW 72
+ER ++++ NIANA TP+Y+A+D+ F+ + Q + TH H S GL
Sbjct: 20 AERSQLLASNIANADTPHYKAQDM-DFQAAMRAAEGKQAQPLQATHAKHFAVSRGGGLAG 78
Query: 73 NAHVI-EAPLDQTTGVQVSGNTV 94
+ + P G + GNTV
Sbjct: 79 DPQALYRVP----HGPALDGNTV 97
>gi|224825161|ref|ZP_03698267.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
gi|224602832|gb|EEG09009.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
Length = 136
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
+F Q N ++R ++++ NIANA TPNY+A D+
Sbjct: 8 YFDFQQQALNLRAKRAEVIASNIANADTPNYKAVDL 43
>gi|153953775|ref|YP_001394540.1| flagellar basal body rod protein FlgB [Clostridium kluyveri DSM
555]
gi|219854391|ref|YP_002471513.1| hypothetical protein CKR_1048 [Clostridium kluyveri NBRC 12016]
gi|146346656|gb|EDK33192.1| FlgB [Clostridium kluyveri DSM 555]
gi|219568115|dbj|BAH06099.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 133
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMARTHETHLKESDSSGLHWNAH 75
SER K +S+N+AN +T Y+ K ++ E++ + N + E H+K + N
Sbjct: 24 SERSKAISDNLANVNTAGYKRKYVTFEESLKDSVYNLELKTDDEKHIK------IGSNYG 77
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN---SMVMHVVRG 130
IE D + ++ GN V + E+ +Y + L+ ++N SM +V+ G
Sbjct: 78 QIETKTDSSNSMREDGNNVDMDTEIVNQAANTLMY---SALVNQMNSRLSMERYVISG 132
>gi|238782789|ref|ZP_04626818.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
gi|238716212|gb|EEQ08195.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
Length = 135
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ L++RQ I++ NIAN TP Y A+DI +Q A K S
Sbjct: 9 FRFQQDALRLLTQRQDILASNIANVDTPGYLARDID-----FSQQLKTAVDRSAPEKGSL 63
Query: 67 SSGLHWNAHV 76
S GL AH+
Sbjct: 64 SLGLTSGAHI 73
>gi|297569163|ref|YP_003690507.1| flagellar basal-body rod protein FlgB [Desulfurivibrio alkaliphilus
AHT2]
gi|296925078|gb|ADH85888.1| flagellar basal-body rod protein FlgB [Desulfurivibrio alkaliphilus
AHT2]
Length = 128
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 25/122 (20%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHLK----ESD 66
N +ERQ ++ NIAN TP Y+ +D FE ++ Q +ART+ HL E+
Sbjct: 19 NLRNERQGMIQSNIANLETPGYKVQDF-PFERVMAQVVSGQGQVARTNPRHLAIDPVEAA 77
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+G E P+D + E+ K + +Y++ +LI K + H
Sbjct: 78 RAGRFREE---ERPVD-------------LDEEMLKLSENQMMYQVAAQLIAKKFEGLRH 121
Query: 127 VV 128
++
Sbjct: 122 II 123
>gi|253990130|ref|YP_003041486.1| flagellar basal body rod protein FlgB [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211639033|emb|CAR67647.1| flagellar basal-body rod protein flgb (putative proximal rod
protein) [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253781580|emb|CAQ84743.1| flagellar basal-body rod protein flgb (putative proximal rod
protein) [Photorhabdus asymbiotica]
Length = 137
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
F + + S RQ+I+S NIANA TP Y+A+DI
Sbjct: 9 FHFQQEALSLRSRRQEILSANIANADTPGYQARDID 44
>gi|300938638|ref|ZP_07153367.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
gi|300456423|gb|EFK19916.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
Length = 138
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+ +DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQTRDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|117623259|ref|YP_852172.1| flagellar basal body rod protein FlgB [Escherichia coli APEC O1]
gi|115512383|gb|ABJ00458.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli APEC
O1]
gi|323953241|gb|EGB49107.1| flagellar basal-body rod protein FlgB [Escherichia coli H252]
Length = 138
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTKHIPA 75
Query: 75 HVIEAPL---------DQTTGVQVSGNTVGITNE 99
+ PL DQ + + GNTV + E
Sbjct: 76 QAL-TPLSAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|229017031|ref|ZP_04173951.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
gi|229023212|ref|ZP_04179723.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
gi|228738137|gb|EEL88622.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
gi|228744302|gb|EEL94384.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
Length = 177
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+ ++ E + L N + +T
Sbjct: 51 SHYMNYLVTKRNTVSSNIANANTPGYKAQGVTFAEQMNMNNPLFKKNAADLKSNSDLYQT 110
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+E HL ++ + I+ L QT GN+V +T E+ LY ++ I
Sbjct: 111 NEMHLPTANMKNTYAK---IQTKLMQTNK---DGNSVDVTTEMLDLMKTNQLYGISINAI 164
>gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
Length = 130
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R + VSENI+NA TP YR K + FE L + +T L SD ++ +H
Sbjct: 21 RLRHVSENISNADTPGYRRKSV-PFEAARDLENDVERVKTGRVVLDRSDLENVYDPSH-- 77
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM---VMHVVR 129
PL +G G+ V + E+ + + Y+ N K+ ++ M +M ++R
Sbjct: 78 --PLADESG-HYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRGMSASLMDLLR 129
>gi|118477179|ref|YP_894330.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis str.
Al Hakam]
gi|118416404|gb|ABK84823.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
Hakam]
Length = 138
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 14 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNISSALYKNNAADLKSNPDLYQTNE 73
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 74 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 108
>gi|4433373|dbj|BAA21014.1| FlgB protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 66
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDIS 42
N ++RQ+I++ NIANA TP Y+A+DI
Sbjct: 17 NLRAQRQEILAANIANADTPGYQARDID 44
>gi|242309756|ref|ZP_04808911.1| flagellar basal-body rod protein flgb proximal rod protein
[Helicobacter pullorum MIT 98-5489]
gi|239523757|gb|EEQ63623.1| flagellar basal-body rod protein flgb proximal rod protein
[Helicobacter pullorum MIT 98-5489]
Length = 144
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+A + ++ S R+ ++S NIAN STP YR KDI +FE ++
Sbjct: 12 LAQEALDYRSLRRDMISSNIANVSTPMYRPKDI-NFEQMM 50
>gi|71736840|ref|YP_275566.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557393|gb|AAZ36604.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 135
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-DFSSVLAAQNDKVQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLMYRTPSQPSLDQNT 97
>gi|90423028|ref|YP_531398.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisB18]
gi|90105042|gb|ABD87079.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisB18]
Length = 136
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 16 WLSERQKIVSENIANASTPNYRAKD-ISSFETILNQ--------NFLMARTHETHLKESD 66
W ERQ+++++NIAN+ TP ++ ++ I T Q + M RT +H+ S
Sbjct: 18 WHQERQRVLADNIANSDTPGFKPRELIEPKFTPSGQLAAGGPMGSLPMLRTSASHI--SA 75
Query: 67 SSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNT 114
+ G+ A D+ +G Q +GN V + +E+ K+ + Y T
Sbjct: 76 AGGIESFAQ------DRNSGFQTRPAGNAVNLEDEMLKTSSNQMDYAAAT 119
>gi|330961193|gb|EGH61453.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 135
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-EFSSVLAAETDKTQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + + P LDQ T
Sbjct: 75 GMGNNDGTLMYRTPSQPSLDQNT 97
>gi|284007176|emb|CBA72462.1| flagellar basal body rod protein FlgB [Arsenophonus nasoniae]
Length = 135
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+RQ I+S NIA+A TP Y+A+DI F L +N + + L + +S H+
Sbjct: 21 QRQAILSANIAHADTPGYQARDI-DFSAQLEKNLMANSVTDKQLSMTVTSV----NHIAV 75
Query: 79 APLDQTTG---------VQVSGNTVGITNEL--YKSGHIKYLYELN 113
P + T V + GNTV + E + +KY +L+
Sbjct: 76 QPANSLTADLLYRVPHQVAMDGNTVDMDMERSHFADNSVKYQTDLS 121
>gi|257484952|ref|ZP_05638993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|298487860|ref|ZP_07005900.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157585|gb|EFH98665.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|331011039|gb|EGH91095.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 135
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-DFSSVLAAENDKVQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLLYRTPSQPSLDQNT 97
>gi|66046710|ref|YP_236551.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
syringae B728a]
gi|63257417|gb|AAY38513.1| Flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
syringae B728a]
gi|320329349|gb|EFW85342.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330880519|gb|EGH14668.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330889088|gb|EGH21749.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
mori str. 301020]
gi|330953718|gb|EGH53978.1| flagellar basal body rod protein FlgB [Pseudomonas syringae Cit
7]
gi|330972410|gb|EGH72476.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330986465|gb|EGH84568.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 135
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-DFSSVLAAENDKVQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLMYRTPSQPSLDQNT 97
>gi|91785637|ref|YP_560843.1| flagellar basal body rod protein FlgB [Burkholderia xenovorans
LB400]
gi|91689591|gb|ABE32791.1| Flagellar basal-body rod protein FlgB [Burkholderia xenovorans
LB400]
Length = 164
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
F Q + + RQ+++S NIANA TP Y+A+D+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYKARDV 43
>gi|163750573|ref|ZP_02157811.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
gi|161329728|gb|EDQ00717.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
Length = 132
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSSGLH 71
++R ++++ NIANA TP+Y+A+D+ +F+ L M+R+ H D + L
Sbjct: 20 AKRAEVIASNIANADTPHYKARDV-NFDKALQAATSRQGGLAMSRSDSRHF---DLTALS 75
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ P TG GNTV + E
Sbjct: 76 QQNYGYRVPNQPDTG---DGNTVDMQKE 100
>gi|325982375|ref|YP_004294777.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
gi|325531894|gb|ADZ26615.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
Length = 136
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ 50
RQ+++S N+ANA TPN++AKDI F ++L++
Sbjct: 22 RQELLSSNVANADTPNFKAKDI-DFASMLHE 51
>gi|149189833|ref|ZP_01868113.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
gi|148836319|gb|EDL53276.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
Length = 120
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
Q N+ +R K+++ N+AN TP Y AKD+ SF T++ Q
Sbjct: 14 QALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMKQ 51
>gi|330811238|ref|YP_004355700.1| flagellar basal-body rod protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379346|gb|AEA70696.1| Putative flagellar basal-body rod protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 135
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
I Q ++ ++R ++++ NIANA TPNY+A+D+ + + QN
Sbjct: 11 IHEQALSFRAQRAEVLANNIANADTPNYKARDLDFSKVLAEQN 53
>gi|88811798|ref|ZP_01127052.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
gi|88791189|gb|EAR22302.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
Length = 131
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHL 62
F + +Q ++R ++++ NIANA TP+Y+A+D F +L+Q N + TH H+
Sbjct: 9 FGLPAQALELRAKRTQLLASNIANADTPHYKARDF-DFSNVLHQARADNATVRTTHAHHI 67
Query: 63 KESDSSGLHWNAHVIE--APLDQTTGVQVSGNTVGITNE 99
+ GL I+ P + + + GNTV + E
Sbjct: 68 R---PGGLSVGNSTIQYRVPANPS----LDGNTVELDRE 99
>gi|255021351|ref|ZP_05293399.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
ATCC 51756]
gi|254969214|gb|EET26728.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
ATCC 51756]
Length = 137
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETI 47
RQ++++ NIANA+TPNYRA DI +T+
Sbjct: 22 RQQLLAANIANANTPNYRAVDIPFAKTL 49
>gi|120554030|ref|YP_958381.1| flagellar basal body rod protein FlgB [Marinobacter aquaeolei
VT8]
gi|120323879|gb|ABM18194.1| flagellar basal-body rod protein FlgB [Marinobacter aquaeolei
VT8]
Length = 132
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 4 ITFFQIASQHANWLSERQK---IVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
ITF + H + L R K +++ N+ANA TP Y+A+D+ F+ ++ + F M
Sbjct: 3 ITFDKALGIHEHALQARVKRAEVLANNLANADTPGYKARDV-DFQAMMQKAQDSMTGFGM 61
Query: 55 ARTHETHLKES 65
TH H+ S
Sbjct: 62 TTTHSGHMDTS 72
>gi|187925764|ref|YP_001897406.1| flagellar basal body rod protein FlgB [Burkholderia phytofirmans
PsJN]
gi|187716958|gb|ACD18182.1| flagellar basal-body rod protein FlgB [Burkholderia phytofirmans
PsJN]
Length = 164
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
F Q + + RQ+++S NIANA TP Y+A+D+
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYKARDV 43
>gi|119503641|ref|ZP_01625724.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2080]
gi|119460703|gb|EAW41795.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2080]
Length = 133
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV- 76
S+R ++S NIANA TPNY+A+DI +F A T ++ +ES H+
Sbjct: 19 SQRMNLLSANIANAETPNYKARDI---------DFRAAMTQASNSQESTQLRATQAKHMT 69
Query: 77 -------IEAPLD--QTTGVQVSGNTVGITNE--LYKSGHIKYLYELN 113
+E+ + Q + +Q +GNTV E + +KY LN
Sbjct: 70 GFESQLGVESDIKYRQPSSLQENGNTVETHREHAEFMENALKYQASLN 117
>gi|229155314|ref|ZP_04283425.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
gi|228628239|gb|EEK84955.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
Length = 135
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 23/103 (22%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKGNPDLYQTNE 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
HL ++ + A + QT +Q + GN+V +T E+
Sbjct: 71 MHLPTVNTKNTY--AKI------QTKSMQTNKDGNSVDVTTEM 105
>gi|220913735|ref|YP_002489044.1| flagellar basal-body rod protein FlgB [Arthrobacter
chlorophenolicus A6]
gi|219860613|gb|ACL40955.1| flagellar basal-body rod protein FlgB [Arthrobacter
chlorophenolicus A6]
Length = 113
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ +T +AS + L+ RQ+ ++ NIAN +TPNY+AK +S E
Sbjct: 2 LESVTSAALASAL-DGLALRQRTIANNIANINTPNYKAKRVS---------------FED 45
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
L S G + +EA L+ T Q++GN V + E
Sbjct: 46 ELAASVRRGNGHTSASVEASLEPT---QLNGNNVNLDTE 81
>gi|78776566|ref|YP_392881.1| flagellar basal body rod protein FlgB [Sulfurimonas denitrificans
DSM 1251]
gi|78497106|gb|ABB43646.1| Flagellar basal-body rod protein FlgB [Sulfurimonas denitrificans
DSM 1251]
Length = 143
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
+A++ ++ + RQ ++S NIANA TP YR +D+ +T+ Q
Sbjct: 11 LAAKALDYRAIRQDMISSNIANADTPFYRPRDVRFEDTLAEQ 52
>gi|88799018|ref|ZP_01114599.1| Flagellar basal body protein [Reinekea sp. MED297]
gi|88778245|gb|EAR09439.1| Flagellar basal body protein [Reinekea sp. MED297]
Length = 132
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 1 MQPITFFQIASQHANWL---SERQKIVSENIANASTPNYRAKDISSFETILN------QN 51
M + F H N L SER +++ N+ANA TP ++A+D+ F+ IL Q+
Sbjct: 1 MSALGFENSLGIHDNALLVRSERSSVLANNLANADTPGFKARDM-DFKAILRGEVEKQQS 59
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
MA T+ H+ G W + PL + + GNTV
Sbjct: 60 LEMAETNSRHIPGRQHEG--WE-KLYRHPLQPS----IDGNTV 95
>gi|331006031|ref|ZP_08329373.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC1989]
gi|330420160|gb|EGG94484.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC1989]
Length = 133
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL 48
S+R +++EN+ANA TP Y+AKDI F+ IL
Sbjct: 20 SDRAGLLAENLANADTPGYKAKDI-DFKGIL 49
>gi|220929471|ref|YP_002506380.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
H10]
gi|219999799|gb|ACL76400.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
H10]
Length = 137
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A+W R +++S+N+AN TPNY+ KD+ +FE LN + + E N
Sbjct: 18 ASWT--RNEVISQNLANIDTPNYKRKDV-TFEQYLNDSLDSRKLEGITTDERHIPIKSKN 74
Query: 74 AHVI--EAPLDQT-TGVQVSGNTVGITNEL 100
+ E LD + T +++ GN V + +E+
Sbjct: 75 IEKVKPEITLDNSDTSMRIDGNNVDVDSEM 104
>gi|254516986|ref|ZP_05129044.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
NOR5-3]
gi|219674491|gb|EED30859.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
NOR5-3]
Length = 135
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF---LMARTHETHLKES 65
I+ Q +++ ++++ NIAN+ TP Y+A+DI + N + + RTH HL S
Sbjct: 15 ISPQVLALRAQKTELLAANIANSDTPGYKARDIDFSAAMANASGAQEALTRTHAAHLSTS 74
Query: 66 DSSG 69
+ G
Sbjct: 75 GTPG 78
>gi|238924173|ref|YP_002937689.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656]
gi|238875848|gb|ACR75555.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656]
gi|291524902|emb|CBK90489.1| flagellar basal-body rod protein FlgB [Eubacterium rectale DSM
17629]
gi|291529043|emb|CBK94629.1| flagellar basal-body rod protein FlgB [Eubacterium rectale M104/1]
Length = 128
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLK 63
+ + ++ A+ +R+ I++ NI+N TP Y+ KD+ +FE +L+Q + + + +
Sbjct: 9 YVNVLTKAADASYQREAILANNISNVDTPGYKRKDL-NFEGVLSQELGRCKHQSLDKKIS 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK--SGHIKY 108
E D+S L N + + ++ GN V I E + S IKY
Sbjct: 68 ELDTSKLTANVYTDHSNY----SYRMDGNNVDIDTENVELASEQIKY 110
>gi|294339846|emb|CAZ88209.1| putative Flagellar basal-body rod protein flgB (Putative proximal
rod protein) [Thiomonas sp. 3As]
Length = 135
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+++S NIANA+TP Y+A D+ F +T LK ++ L N
Sbjct: 17 NLRAQRQQLLSANIANANTPGYKAVDV-DFSAAFKAALSGQQTGGLPLKTENARQLAGNV 75
Query: 75 HVIEAPLDQT-------TGVQVSGNTVGITNE--LYKSGHIKYLYELN--TKLIKKLNSM 123
AP V ++GN+V + E ++ I+Y +L T IK L S
Sbjct: 76 ----APAGSNFIAYQAGNNVSLNGNSVDMNREQAAFQKNSIQYEADLTFLTGKIKTLTSA 131
Query: 124 V 124
+
Sbjct: 132 I 132
>gi|28869137|ref|NP_791756.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213967585|ref|ZP_03395733.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato T1]
gi|237799203|ref|ZP_04587664.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806222|ref|ZP_04592926.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|301385710|ref|ZP_07234128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tomato Max13]
gi|302060078|ref|ZP_07251619.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tomato K40]
gi|302134837|ref|ZP_07260827.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28852377|gb|AAO55451.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927886|gb|EEB61433.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato T1]
gi|331017029|gb|EGH97085.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
gi|331022058|gb|EGI02115.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027335|gb|EGI07390.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 135
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-EFSSVLAAENDKAQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLMYRTPSQPSLDQNT 97
>gi|15646166|ref|NP_208350.1| flagellar basal body rod protein FlgB [Helicobacter pylori 26695]
gi|217031712|ref|ZP_03437216.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
gi|298737152|ref|YP_003729682.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
gi|2314742|gb|AAD08599.1| flagellar basal-body rod protein (flgB) [Helicobacter pylori
26695]
gi|216946559|gb|EEC25159.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
gi|298356346|emb|CBI67218.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
Length = 140
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ S RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRSLRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|330875980|gb|EGH10129.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967087|gb|EGH67347.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 135
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-EFSSVLAAENDKAQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLMYRTPSQPSLDQNT 97
>gi|307720252|ref|YP_003891392.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
DSM 16294]
gi|306978345|gb|ADN08380.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
DSM 16294]
Length = 143
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
++ + RQ ++S NIANA TP Y+ +DI SFE + L+A+ +E + NA
Sbjct: 17 DYRAARQDMISSNIANADTPYYKPRDI-SFE-----DALIAKKNELY---------QDNA 61
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELY-KSGHI 106
H ++ + +Q I LY + GH+
Sbjct: 62 HQLKMAQTNSGHLQPKAQASQIKPTLYFRDGHM 94
>gi|30261742|ref|NP_844119.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Ames]
gi|47526962|ref|YP_018311.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
'Ames Ancestor']
gi|49184572|ref|YP_027824.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Sterne]
gi|65319011|ref|ZP_00391970.1| COG1815: Flagellar basal body protein [Bacillus anthracis str.
A2012]
gi|165869479|ref|ZP_02214138.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0488]
gi|167633168|ref|ZP_02391493.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0442]
gi|167639175|ref|ZP_02397448.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0193]
gi|170686191|ref|ZP_02877413.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0465]
gi|170706512|ref|ZP_02896972.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0389]
gi|177650628|ref|ZP_02933595.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0174]
gi|190566366|ref|ZP_03019284.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
Tsiankovskii-I]
gi|227815499|ref|YP_002815508.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
684]
gi|229601762|ref|YP_002866142.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0248]
gi|254683232|ref|ZP_05147093.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
CNEVA-9066]
gi|254723820|ref|ZP_05185606.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
A1055]
gi|254734584|ref|ZP_05192296.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Western North America USA6153]
gi|254740993|ref|ZP_05198681.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Kruger B]
gi|254755236|ref|ZP_05207270.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Vollum]
gi|254759772|ref|ZP_05211796.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Australia 94]
gi|30255970|gb|AAP25605.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
Ames]
gi|47502110|gb|AAT30786.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
'Ames Ancestor']
gi|49178499|gb|AAT53875.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
Sterne]
gi|164714919|gb|EDR20437.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0488]
gi|167512965|gb|EDR88338.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0193]
gi|167531206|gb|EDR93884.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0442]
gi|170128610|gb|EDS97477.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0389]
gi|170669888|gb|EDT20629.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0465]
gi|172083772|gb|EDT68832.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0174]
gi|190562501|gb|EDV16468.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
Tsiankovskii-I]
gi|227006070|gb|ACP15813.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
684]
gi|229266170|gb|ACQ47807.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0248]
Length = 135
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----DSS 68
+ N+L ++ VS NIANA+TP Y+A+D+ +F +N++ + + + LK + ++
Sbjct: 11 YMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKNNAADLKSNPDLYQTN 69
Query: 69 GLH---WNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+H N A + QT +Q + GN+V +T E+
Sbjct: 70 EMHVPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 105
>gi|289679032|ref|ZP_06499922.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
syringae FF5]
gi|302185586|ref|ZP_07262259.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
syringae 642]
gi|330899398|gb|EGH30817.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330943204|gb|EGH45611.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330975973|gb|EGH76039.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 135
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-EFSSVLAAETDKAQNGHFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLMYRTPSQPSLDQNT 97
>gi|120598229|ref|YP_962803.1| flagellar basal body rod protein FlgB [Shewanella sp. W3-18-1]
gi|120558322|gb|ABM24249.1| flagellar basal-body rod protein FlgB [Shewanella sp. W3-18-1]
Length = 134
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS-------SFETILNQNFLMARTHETHLKESDSSGL 70
+ER +++S NIANA TP+Y+A+D+ + +N L +E H ++ +G
Sbjct: 20 AERAEVISSNIANADTPHYKARDVDFSAAMQAARSQQQQRNHLDMGDNERHFGLAELTGQ 79
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ V P TG GNTV I E
Sbjct: 80 YVKFRVPNQP---DTG---DGNTVDIQQE 102
>gi|152980267|ref|YP_001353108.1| FlgB flagellar basal body protein [Janthinobacterium sp.
Marseille]
gi|151280344|gb|ABR88754.1| FlgB flagellar basal body protein [Janthinobacterium sp.
Marseille]
Length = 139
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
+RQ+I++ NIANA TPN++A+D+
Sbjct: 20 GQRQQILASNIANADTPNFKARDV 43
>gi|134095100|ref|YP_001100175.1| basal-body rod protein [Herminiimonas arsenicoxydans]
gi|133739003|emb|CAL62051.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
protein) [Herminiimonas arsenicoxydans]
Length = 139
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 22/24 (91%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
++RQ++++ NIANA TPN++A+DI
Sbjct: 20 AQRQQLLASNIANADTPNFKARDI 43
>gi|203287754|ref|YP_002222769.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
gi|201084974|gb|ACH94548.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
Length = 135
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ + L RQ +V++NIAN TPN++ + +FE L + L +T+ L ++
Sbjct: 9 DLTHRYLDVLGLRQSVVADNIANVDTPNFKRSKV-TFEAELERAILNEKTNNLSLIRGNN 67
Query: 68 ---SGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
G ++ P LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHLDGFKELGYLDVKPQRMLDHLSTLNNNGNNVDIDSEMKSLVQNQMMYRLFTNI 122
>gi|163803166|ref|ZP_02197049.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
gi|159173066|gb|EDP57899.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
Length = 120
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T+++Q
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMDQ 51
>gi|268680293|ref|YP_003304724.1| flagellar basal-body rod protein FlgB [Sulfurospirillum
deleyianum DSM 6946]
gi|268618324|gb|ACZ12689.1| flagellar basal-body rod protein FlgB [Sulfurospirillum
deleyianum DSM 6946]
Length = 144
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQN-----FLM 54
Q+ N + RQ ++S NIAN TP Y+A+DI FE+ L QN M
Sbjct: 10 QLLEAGLNARAMRQDLISSNIANIDTPFYKARDI-DFESALIEKKREIYGQNSTADTLEM 68
Query: 55 ARTHETHLK 63
A+T +HLK
Sbjct: 69 AQTDTSHLK 77
>gi|229189840|ref|ZP_04316851.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
gi|228593648|gb|EEK51456.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
Length = 147
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES----D 66
S + N+L ++ VS NIAN +TP Y+A+D+ +F +N++ + + + LK +
Sbjct: 21 SHYMNYLVTKRNTVSSNIANGNTPGYKAQDV-TFAEQMNKSSALYKNNAADLKSNPDLYQ 79
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
++ +H N A + QT +Q + GN+V +T E+
Sbjct: 80 TNKMHLPTVNTKNTYAKI-QTKSMQTNKDGNSVDVTTEM 117
>gi|300693334|ref|YP_003749307.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum PSI07]
gi|299075371|emb|CBJ34666.2| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum PSI07]
Length = 175
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMART 57
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M T
Sbjct: 30 LFGFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKAVGQQSGSSLPMTAT 88
Query: 58 HETHLKESDSSG-----------LHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSG 104
HL + + A ++ + T Q + GNTV + E +
Sbjct: 89 AAGHLTAAGAPAADVTPMQASLSAQSQADALQGEVQYRTSQQPSIDGNTVDMDGERMRFA 148
Query: 105 HIKYLYELNTKLI-KKLNSMVMHV 127
YE + ++ K+ SM+ +
Sbjct: 149 DNTVRYEADLSIVTAKIKSMLAAI 172
>gi|313610105|gb|EFR85430.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
F2-208]
Length = 133
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL-------NQNFL-----MARTHETHL 62
N+L ++VS NIANA+TPN++A + +SFE L QN + + +T+ HL
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSIESAGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D NA V ++ + GN V +T+E+ +Y L + NS
Sbjct: 72 AGTDID--ETNAKVTT----KSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|229102342|ref|ZP_04233050.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
gi|229115184|ref|ZP_04244594.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
gi|228668324|gb|EEL23756.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
gi|228680989|gb|EEL35158.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
Length = 135
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 9 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMSKSSALYKNNAADLKSNPDLYQT 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL + + A + QT +Q + GN+V +T E+
Sbjct: 69 NEMHLPTVNMKNTY--AKI------QTKSMQKNQDGNSVDVTTEM 105
>gi|119953093|ref|YP_945302.1| flagellar basal body rod protein FlgB [Borrelia turicatae 91E135]
gi|119861864|gb|AAX17632.1| flagellar basal-body rod protein FlgB [Borrelia turicatae 91E135]
Length = 137
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+A ++ + LS RQ ++++N+AN TPN++ + +FE+ L + L+ +
Sbjct: 11 DLAHRYLDVLSLRQSVIADNVANVDTPNFKRSKV-TFESELERAIFNEGASSLSLRRGNG 69
Query: 68 ---SGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
G ++ P LD + + +GN V I +E+ + +Y L T +
Sbjct: 70 KHLDGFKELGYLDVKPRRMLDYLSTLNNNGNNVDIDSEMKNLAQNQMMYSLFTNI 124
>gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2]
Length = 143
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDI-------SSFETILNQNFL----MARTHETHLKESD 66
++R +++S N+ANA+TP Y+AKDI S+ Q+ L + RTH+ H+ D
Sbjct: 20 TDRMEVISGNLANANTPGYKAKDIDFNKAMESAMSAQDGQHKLGGGSLVRTHDKHIG-GD 78
Query: 67 SSGLHWNAHV-IEAPLDQTTGVQVSGNTVGITNE 99
S + N + P TG GNTV + E
Sbjct: 79 VSSVASNFEMQYRIPTQPDTG---DGNTVEVQAE 109
>gi|289627760|ref|ZP_06460714.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651650|ref|ZP_06482993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330866419|gb|EGH01128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 137
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 36/56 (64%), Gaps = 9/56 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHL 62
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N +F + +T+ H+
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-DFSSVLAAENDKVQNGHFALNKTNSRHI 71
>gi|327399356|ref|YP_004340225.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
gi|327181985|gb|AEA34166.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
Length = 132
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILN--QNFLMART-HETHLKESDSSGLHWNAHV 76
RQ +++ NIANA TPNY+AK I F IL QN L + +E H+K + ++
Sbjct: 22 RQDLIASNIANADTPNYKAKHI-PFNDILKLRQNDLKLKVDNEKHIKPKEDLD-----YI 75
Query: 77 IEAPLDQTTGVQVSGNTVGITNEL 100
++ +D V+ N V + EL
Sbjct: 76 VKKDVDDYL-VKNDQNNVKLDKEL 98
>gi|299068729|emb|CBJ39968.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum CMR15]
Length = 153
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMART 57
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M T
Sbjct: 8 LFDFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKATGQQSGNSLPMTAT 66
Query: 58 HETHLKESDSSG-----------LHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSG 104
HL + + A ++ + T Q + GNTV + E +
Sbjct: 67 AAGHLTAAGAQAGDVVPMQASLSAQSQADPLQGEVQYRTSQQPSIDGNTVDMDGERMRFA 126
Query: 105 HIKYLYELNTKLI-KKLNSMVMHV 127
YE + ++ K+ SM+ +
Sbjct: 127 DNTVRYEADLSIVTAKIKSMLAAI 150
>gi|82777312|ref|YP_403661.1| flagellar basal body rod protein FlgB [Shigella dysenteriae Sd197]
gi|81241460|gb|ABB62170.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
Sd197]
Length = 138
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ++++ NIANA TP Y+ +DI F + L + R + + +S H A
Sbjct: 17 NLRAQRQEVLAANIANADTPGYQVRDI-DFASELKKVMQRGRDATSVVALMMTSTQHIPA 75
Query: 75 HVIEAPL--------DQTTGVQVSGNTVGITNE 99
+ P DQ + + GNTV + E
Sbjct: 76 QALTPPTAELQYRIPDQPS---LDGNTVDMDRE 105
>gi|229096229|ref|ZP_04227202.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
gi|228687189|gb|EEL41094.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
Length = 138
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMART 57
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T
Sbjct: 12 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMSKSSALYKNNAADLKSNPDLYQT 71
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNEL 100
+E HL + + A + QT +Q + GN+V +T E+
Sbjct: 72 NEMHLPTVNMKNTY--AKI------QTKSMQKNQDGNSVDVTTEM 108
>gi|163733138|ref|ZP_02140582.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
litoralis Och 149]
gi|161393673|gb|EDQ17998.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
litoralis Och 149]
Length = 141
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------FLM 54
+ + F+++ A ++Q + ++N+AN+ TP+++AKD+ +F +
Sbjct: 11 FEKLELFRMSHAMAVHAGQKQAVTAQNVANSDTPDFKAKDLIAFSDAYRLDPSNGGWGSQ 70
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGV-QVSGNTVGITNELYKS 103
T +TH+ + A P+ GV +GNTV + NE+ KS
Sbjct: 71 KATRQTHIHGA-------AAGQTPDPIVDENGVGSPNGNTVSLENEMLKS 113
>gi|319944138|ref|ZP_08018416.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
51599]
gi|319742632|gb|EFV95041.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
51599]
Length = 154
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 39/142 (27%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ-----------------------NFLM 54
+ RQ+ ++ NIANA TPN++AKD F L + +
Sbjct: 22 ASRQETIASNIANADTPNFKAKDF-DFGAALREASGMPASDAGSSAALPAAEGGLSTVAL 80
Query: 55 ARTHETH------LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
ARTH H LK L + H + +D GNTV + E +
Sbjct: 81 ARTHRGHQQLGGALKSGGKPDLKY-VHPEQPSMD--------GNTVDLNRERAQFSQNAV 131
Query: 109 LYELNTKLIKKLNSMVMHVVRG 130
YE + + + +M +RG
Sbjct: 132 GYEASLRFLNGRIKTMMTAIRG 153
>gi|320325090|gb|EFW81159.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
glycinea str. B076]
Length = 135
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 14/83 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHETHLKESD 66
N+ ++R ++++ NI+NA TPN++A+D+ F ++L N F + +T+ H+ E++
Sbjct: 17 NFRAQRAEVLANNISNADTPNFKARDL-DFSSVLAAENDKVQNGYFALNKTNSRHI-EAE 74
Query: 67 SSGLHWNAHVIEAP----LDQTT 85
G + P LDQ T
Sbjct: 75 GMGNDDGTLMYRTPSQPSLDQNT 97
>gi|254932010|ref|ZP_05265369.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HPB2262]
gi|290894007|ref|ZP_06556982.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J2-071]
gi|290556453|gb|EFD89992.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J2-071]
gi|293583562|gb|EFF95594.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HPB2262]
gi|332311134|gb|EGJ24229.1| Flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
Scott A]
Length = 133
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDIS---SFETIL---NQNFL-----MARTHETHLK 63
N+L ++VS NIANA+TPN++A + S SF + L QN + + +T+ HL
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHLA 72
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+D NA V ++ + GN V +T+E+ +Y L + NS
Sbjct: 73 GTDID--ETNAKVTT----KSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSS 125
Query: 124 VMHVVRG 130
+ RG
Sbjct: 126 INTAARG 132
>gi|32266906|ref|NP_860938.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
51449]
gi|32262958|gb|AAP78004.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
51449]
Length = 144
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 29/131 (22%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------------NFL 53
+ I + ++ S RQ +++ N+AN TP YR KD+ +FE L++
Sbjct: 10 YPIVHKALDYRSIRQDMIASNLANVDTPFYRPKDV-NFEQYLSRENKKIFGTAPRSYKLE 68
Query: 54 MARTHETHLK----ESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+A+T HL + D++ + W + H+ + GN+V + E + G
Sbjct: 69 LAKTSSKHLDTRRIDKDTATMFWRDGHL----------AKNDGNSVDLDVETSEMGKNST 118
Query: 109 LYELNTKLIKK 119
+Y+ T +K+
Sbjct: 119 MYQALTSALKR 129
>gi|89902474|ref|YP_524945.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
T118]
gi|89347211|gb|ABD71414.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
T118]
Length = 150
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL 48
+ERQ++++ NIANA TP Y A+D++ + +L
Sbjct: 20 AERQRVIASNIANADTPGYVARDLNFKDAML 50
>gi|296135676|ref|YP_003642918.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12]
gi|295795798|gb|ADG30588.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12]
Length = 135
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N ++RQ+++S NIANA+TP Y+A D+ F +T LK ++ L N
Sbjct: 17 NLRAQRQQLLSANIANANTPGYKAVDL-DFSAAFKAALSGQQTGGLPLKTENARQLAGNV 75
Query: 75 HVIEAPLDQT-------TGVQVSGNTVGITNE--LYKSGHIKYLYELN--TKLIKKLNSM 123
AP V ++GN+V + E ++ I+Y +L T IK L S
Sbjct: 76 ----APAGSNFIAYQAGNNVSLNGNSVDMNREQAAFQKNSIQYEADLTFLTGKIKTLTSA 131
Query: 124 V 124
+
Sbjct: 132 I 132
>gi|292492360|ref|YP_003527799.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
Nc4]
gi|291580955|gb|ADE15412.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
Nc4]
Length = 133
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ 50
S R ++++ N+ANA TP Y+A+DI F+T L Q
Sbjct: 20 SRRAELLAANLANADTPGYKARDI-DFKTALQQ 51
>gi|254503455|ref|ZP_05115606.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
gi|222439526|gb|EEE46205.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
Length = 129
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
+ FQ W RQ +++ENIAN+ +P + A+D+ ++
Sbjct: 1 MPLFQALKSKMQWHQTRQGVLAENIANSDSPEFEARDVKAY 41
>gi|85058008|ref|YP_453710.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
gi|84778528|dbj|BAE73305.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
Length = 137
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI 41
N L+ RQ +++ NIANA TP Y+A+DI
Sbjct: 17 NILNRRQDVLAANIANADTPGYQARDI 43
>gi|167034947|ref|YP_001670178.1| flagellar basal body rod protein FlgB [Pseudomonas putida GB-1]
gi|166861435|gb|ABY99842.1| flagellar basal-body rod protein FlgB [Pseudomonas putida GB-1]
Length = 136
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL---------NQNFLMARTHETHLKESD 66
+ ++R ++++ NIANA TPNY+A+D+ F ++L F + RT+ H+ E+D
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDM-DFASVLAAESDKQQSGGRFSLDRTNSRHI-EAD 75
Query: 67 SSGLHWNAHVIEAPL----DQTT 85
+ PL DQ T
Sbjct: 76 GLAMADETLKYRTPLQPSIDQNT 98
>gi|162661125|gb|EDQ48677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 515
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ARTHETHLKESDSSGLHWNA 74
++R I++ NIANA TP Y+AKD+ E + N M + T + H+ S+ + ++
Sbjct: 401 TQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKSI-YDT 459
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNE 99
V P Q + + NTV + E
Sbjct: 460 QVAFRPASQNS---LDRNTVDLDQE 481
>gi|157164065|ref|YP_001467063.1| flagellar basal body rod protein FlgB [Campylobacter concisus
13826]
gi|112800415|gb|EAT97759.1| flagellar basal-body rod protein FlgB [Campylobacter concisus
13826]
Length = 144
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 13/59 (22%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETIL------------NQNFLMARTHETHLKESD 66
RQK++S N+AN TP Y+A+D+ FE +L ++ +A+T+E H+ D
Sbjct: 23 RQKLISGNLANVDTPFYKARDV-RFEDVLREKANEIYNVSESKKLNLAKTNEAHMAAVD 80
>gi|46906961|ref|YP_013350.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
serotype 4b str. F2365]
gi|47095276|ref|ZP_00232887.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
1/2a F6854]
gi|224498792|ref|ZP_03667141.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
Finland 1988]
gi|254829367|ref|ZP_05234054.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N3-165]
gi|254900054|ref|ZP_05259978.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
J0161]
gi|254911393|ref|ZP_05261405.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
J2818]
gi|254935720|ref|ZP_05267417.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
F6900]
gi|254993618|ref|ZP_05275808.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J2-064]
gi|255025678|ref|ZP_05297664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J2-003]
gi|46880227|gb|AAT03527.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
serotype 4b str. F2365]
gi|47016347|gb|EAL07269.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
1/2a F6854]
gi|258601780|gb|EEW15105.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N3-165]
gi|258608303|gb|EEW20911.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
F6900]
gi|293589330|gb|EFF97664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
J2818]
Length = 133
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+L ++VS NIANA+TPN++A + +SFE L + + + T ES + N
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNST---ESAGNLTKTNT 68
Query: 75 -HVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H+ +D+T + GN V +T+E+ +Y L + NS +
Sbjct: 69 KHLAGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSSIN 127
Query: 126 HVVRG 130
RG
Sbjct: 128 TAARG 132
>gi|308064341|gb|ADO06228.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Sat464]
Length = 140
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLGYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|187778745|ref|ZP_02995218.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
15579]
gi|187772370|gb|EDU36172.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
15579]
Length = 133
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKESDSSGLHWNAH 75
S R + +S NIAN +TP Y+ ++ ET+ + N M T E H+ G
Sbjct: 24 SYRGRAISNNIANYNTPGYKRHYVTFEETLKDNLNNINMKVTTEKHMNNGAEFGQ----- 78
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
++ +D +T ++ GN V I NE+ + +Y
Sbjct: 79 -VKEEVDNSTSMRTDGNNVDIDNEMVNNSANALMY 112
>gi|78485815|ref|YP_391740.1| flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
XCL-2]
gi|78364101|gb|ABB42066.1| Flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
XCL-2]
Length = 133
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 19 ERQKIVSENIANASTPNYRAKDIS 42
ERQ I++ NIANA TPN++A+D+
Sbjct: 17 ERQSILANNIANADTPNFKARDVD 40
>gi|255022491|ref|ZP_05294477.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J1-208]
Length = 133
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL-------NQNFL-----MARTHETHL 62
N+L ++VS NIANA+TPN++A + +SFE L QN + + +T+ HL
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSIESAGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTG-VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+D A L +G + GN V +T+E+ +Y L + N
Sbjct: 72 AGTD-------IDETNAKLTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|1857439|gb|AAC45657.1| FlgB [Proteus mirabilis]
Length = 139
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + ++RQ+I++ NIANA TP ++A+DI F L + RT L+ +
Sbjct: 9 FHFQQEALSLRNKRQEILAANIANADTPGFQARDI-DFAAELKKTMENGRTGSHGLQLTM 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNE---LY-KSGHIKYLYEL 112
+S H + +EA L Q S GNTV + E LY +KYL ++
Sbjct: 68 TSERHIPIKPGYRLEADLLYRVPHQTSMDGNTVDMDMERSNLYVPDNSVKYLADV 122
>gi|254255084|ref|ZP_04948401.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
gi|124899729|gb|EAY71572.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
Length = 160
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTH 58
+ER +I++ N+AN +TP ++A+DI +S E +L + A H
Sbjct: 59 TERTRILASNLANGATPGFQARDIDFRASLERMLTDDAFAAAAH 102
>gi|16802752|ref|NP_464237.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
EGD-e]
gi|224501985|ref|ZP_03670292.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
R2-561]
gi|254830299|ref|ZP_05234954.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
10403S]
gi|284801040|ref|YP_003412905.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5578]
gi|284994182|ref|YP_003415950.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5923]
gi|16410099|emb|CAC98788.1| lmo0710 [Listeria monocytogenes EGD-e]
gi|284056602|gb|ADB67543.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5578]
gi|284059649|gb|ADB70588.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5923]
Length = 133
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+L ++VS NIANA+TPN++A + +SFE L + R + ES + N
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSL---RASGQNSAESAGNLTKTNT 68
Query: 75 -HVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H+ +D+T + GN V +T+E+ +Y L + NS +
Sbjct: 69 KHLAGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSSIN 127
Query: 126 HVVRG 130
RG
Sbjct: 128 TAARG 132
>gi|149911705|ref|ZP_01900313.1| flagellar basal body protein [Moritella sp. PE36]
gi|149805235|gb|EDM65252.1| flagellar basal body protein [Moritella sp. PE36]
Length = 131
Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKESDSSGLHWN 73
R ++++ NIANA TP ++A+D+ SF+ L +F +++T E H+ S
Sbjct: 21 RRAEVLASNIANADTPGFKARDL-SFKDALASATQGSSFNLSKTSERHISGGRSMASDLQ 79
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNE 99
+ P TG GNTV + E
Sbjct: 80 YRIPNQP---DTG---DGNTVDVQTE 99
>gi|229592133|ref|YP_002874252.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
SBW25]
gi|312962591|ref|ZP_07777081.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
WH6]
gi|229363999|emb|CAY51549.1| putative flagellar basal-body rod protein [Pseudomonas
fluorescens SBW25]
gi|311283171|gb|EFQ61762.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
WH6]
Length = 135
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
I Q + ++R ++++ NIANA TPNY+A+D+ F +L
Sbjct: 11 IHEQALGFRAQRAEVLANNIANADTPNYKARDL-DFSAVL 49
>gi|160897165|ref|YP_001562747.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
gi|160362749|gb|ABX34362.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
Length = 129
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ARTHETHLKESDSSGLHWNA 74
++R I++ NIANA TP Y+AKD+ E + N M + T + H+ S+ + ++
Sbjct: 15 TQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKSI-YDT 73
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNE 99
V P Q + + NTV + E
Sbjct: 74 QVAFRPASQNS---LDRNTVDLDQE 95
>gi|225159034|ref|ZP_03725344.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium TAV2]
gi|224802413|gb|EEG20675.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium TAV2]
Length = 144
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-FETILNQNF-LMARTHETHLKE 64
+Q+A + + RQ+ ++ NIANA TP +R D+SS F L F A + ++
Sbjct: 21 YQLARKLLDAAVLRQEAIASNIANAETPGFRRLDVSSDFAATLRARFNEAAASGSERVQM 80
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK----SGHIKYLYELNTKLIKKL 120
SD ++E +T V+ GN+V + EL S +L E+ ++ IK+L
Sbjct: 81 SD-----LTPRLMEDASART--VRPDGNSVELETELLAMNRNSVEYDFLTEVVSRHIKQL 133
>gi|77165841|ref|YP_344366.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
19707]
gi|76884155|gb|ABA58836.1| Flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
19707]
Length = 131
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLKES 65
S R ++++ N+AN TP Y+A+DI ++ + Q + TH H+ S
Sbjct: 20 SRRAEVLAANLANGDTPGYKARDIDFKAALQQAQGQGLPLQATHAGHVSHS 70
>gi|254853086|ref|ZP_05242434.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
R2-503]
gi|255521220|ref|ZP_05388457.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J1-175]
gi|300764523|ref|ZP_07074516.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N1-017]
gi|258606435|gb|EEW19043.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
R2-503]
gi|300514877|gb|EFK41931.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N1-017]
Length = 133
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+L ++VS NIANA+TPN++A + +SFE L + + + T ES + N
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNST---ESAGNLTKTNT 68
Query: 75 -HVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H+ +D+T + GN V +T+E+ +Y L + NS +
Sbjct: 69 KHLAGTEIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSSIN 127
Query: 126 HVVRG 130
RG
Sbjct: 128 TAARG 132
>gi|70731826|ref|YP_261568.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
Pf-5]
gi|68346125|gb|AAY93731.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
Pf-5]
Length = 155
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 21/102 (20%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTHET 60
I Q + ++R ++++ NIANA TPNY+A+D+ F +L N F + T+
Sbjct: 31 IHEQALGFRAKRAEVLANNIANADTPNYKARDL-DFSAVLAEQNQKAQNGTFALNMTNNR 89
Query: 61 H-----LKESDSSGLHW-------NAHVIEAPLDQTTGVQVS 90
H L D S L+ + + ++A L+Q++ Q S
Sbjct: 90 HIEAQGLSSGDESLLYRTPMQPSIDQNTVDAQLEQSSYAQNS 131
>gi|301631994|ref|XP_002945076.1| PREDICTED: flagellar basal-body rod protein flgB-like [Xenopus
(Silurana) tropicalis]
Length = 141
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDI 41
H N L +ERQ++++ NIANA TP Y A+D
Sbjct: 12 HGNALMLRAERQRVIASNIANADTPGYVARDF 43
>gi|121533766|ref|ZP_01665593.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
Nor1]
gi|121307757|gb|EAX48672.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
Nor1]
Length = 164
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 20 RQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R K++S NIAN +TP ++ ++ + LN ++RTH+ H+ + G ++ V
Sbjct: 54 RHKVISNNIANVNTPGFKRSEVHFEEQLKQALNAKSGLSRTHQRHIA---AKGDDFSVEV 110
Query: 77 IEAPLDQTTGVQVSGNTVGITNEL 100
I T + GN V I E+
Sbjct: 111 ITV---NNTAYRADGNNVDIDFEM 131
>gi|78067840|ref|YP_370609.1| flagellar basal body rod protein FlgB [Burkholderia sp. 383]
gi|77968585|gb|ABB09965.1| Flagellar basal-body rod protein FlgB [Burkholderia sp. 383]
Length = 162
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + + RQ+++S NIAN+ TP Y+A+D+ T+ AR+ LK++
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANSDTPGYQARDVDFASTL-------ARS----LKQTG 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
NA + P+ Q GV T G++ +GH+
Sbjct: 58 GGLAPSNAAQL--PMAQPAGV-----TSGMSMVSTAAGHM 90
>gi|223040425|ref|ZP_03610699.1| flagellar basal-body rod protein FlgB [Campylobacter rectus
RM3267]
gi|222878275|gb|EEF13382.1| flagellar basal-body rod protein FlgB [Campylobacter rectus
RM3267]
Length = 145
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNF--LMARTHETHLKESDSSGLHW 72
RQ+++S NIAN TP Y+A+DI +FE L+Q + R LK + + H+
Sbjct: 24 RQQMISSNIANIDTPFYKARDI-AFEAALSQTAQEIYGRDENKILKLAQTDDAHF 77
>gi|186477694|ref|YP_001859164.1| flagellar basal body rod protein FlgB [Burkholderia phymatum
STM815]
gi|184194153|gb|ACC72118.1| flagellar basal-body rod protein FlgB [Burkholderia phymatum
STM815]
Length = 163
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
F Q + + RQ+++S NIAN+ TP Y+A+DI
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANSDTPGYKARDI 43
>gi|254437531|ref|ZP_05051025.1| flagellar basal-body rod protein FlgB [Octadecabacter antarcticus
307]
gi|198252977|gb|EDY77291.1| flagellar basal-body rod protein FlgB [Octadecabacter antarcticus
307]
Length = 105
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS-SGLHWNAHVIEAPL 81
+++ NIANA+TPN++A+D+ FE + + + +T + DS +GL + PL
Sbjct: 1 MLASNIANAATPNFKARDL-DFEQEMARQVGDSPLRKTSARHMDSLAGLGGSGVQFRQPL 59
Query: 82 DQTTGVQVSGNTVGITNE 99
+ + + GNTV I+ E
Sbjct: 60 NPS----LDGNTVEISVE 73
>gi|312884837|ref|ZP_07744529.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367489|gb|EFP95049.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 120
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
N+ +R K+++ N+AN TP Y AKD+ SF T+++Q
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-SFATVVSQ 51
>gi|17548563|ref|NP_521903.1| flagellar basal-body rod protein FlgB [Ralstonia solanacearum
GMI1000]
gi|17430811|emb|CAD17493.1| probable flagellar basal-body rod protein flgb [Ralstonia
solanacearum GMI1000]
Length = 165
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMART 57
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M T
Sbjct: 20 LFGFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKAAGQQSGNSLPMTAT 78
Query: 58 HETHLKESDSSG-----------LHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSG 104
HL + + A ++ + T Q + GNTV + E +
Sbjct: 79 AAGHLTAAGAPAGDVVPMQASLSAQSKADPLQGEVQYRTSQQPSIDGNTVDMDGERMRFA 138
Query: 105 HIKYLYELNTKLI-KKLNSMVMHV 127
YE + ++ K+ SM+ +
Sbjct: 139 DNTVRYEADLSIVTAKIKSMLAAI 162
>gi|217965192|ref|YP_002350870.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HCC23]
gi|217334462|gb|ACK40256.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HCC23]
gi|307570249|emb|CAR83428.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
Length = 133
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDIS---SFETIL---NQNFL-----MARTHETHLK 63
N+L ++VS NIANA+TPN++A + S SF + L QN + + +T+ HL
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHLA 72
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG-VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D A L +G + GN V +T+E+ +Y L + NS
Sbjct: 73 GTD-------IDETNAKLTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|157373210|ref|YP_001471810.1| flagellar basal body rod protein FlgB [Shewanella sediminis
HAW-EB3]
gi|157315584|gb|ABV34682.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
HAW-EB3]
Length = 116
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
I Q ++ ER KI++ N+ANA TP Y+AKD+ +F+ ++
Sbjct: 11 IHPQTLDFRVERTKILAGNLANAETPGYKAKDL-NFQALM 49
>gi|330447900|ref|ZP_08311548.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492091|dbj|GAA06045.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 120
Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
Q ++ +R K+++ N+AN TP Y AKDI F+ I NQ
Sbjct: 14 QTLDFRVQRAKVLASNLANVDTPGYLAKDI-RFDAIANQ 51
>gi|255321465|ref|ZP_05362623.1| flagellar basal-body rod protein FlgB [Campylobacter showae
RM3277]
gi|255301321|gb|EET80580.1| flagellar basal-body rod protein FlgB [Campylobacter showae
RM3277]
Length = 145
Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ 50
RQ+++S NIAN TP Y+A+DI +FE L+Q
Sbjct: 24 RQQMISSNIANIDTPFYKARDI-AFEAALSQ 53
>gi|254458790|ref|ZP_05072214.1| flagellar basal-body rod protein FlgB [Campylobacterales
bacterium GD 1]
gi|207084556|gb|EDZ61844.1| flagellar basal-body rod protein FlgB [Campylobacterales
bacterium GD 1]
Length = 143
Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDIS 42
S ++ + RQ ++S NIANA TP YR +DIS
Sbjct: 13 SDALDYRAMRQDMISSNIANADTPFYRPRDIS 44
>gi|196247642|ref|ZP_03146344.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
gi|196212426|gb|EDY07183.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
Length = 129
Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
Q + S RQ+ +++NIAN TP Y+AKD+ F+ LN+ + RT+ H
Sbjct: 13 QGLRYASLRQQAIADNIANVDTPGYKAKDV-RFQAELNRALQLEAKRTNPNHF 64
>gi|332525069|ref|ZP_08401249.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
gi|332108358|gb|EGJ09582.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
Length = 150
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
SERQ++++ NIANA TP Y A+D
Sbjct: 20 SERQRVIASNIANADTPGYVARDF 43
>gi|308185346|ref|YP_003929479.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180]
gi|308061266|gb|ADO03162.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180]
Length = 140
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 28/139 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---------NQN---FLM 54
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L NQ+ +
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVLAEKKAEIFENQSSKVLPL 65
Query: 55 ARTHETHLK----ESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
A T+ HL D + L + + H+ + GN+V + E + G +
Sbjct: 66 AHTNPRHLDFENSAKDGASLFFRDGHL----------AKNDGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK M+ + +
Sbjct: 116 YLALSSALKKYRGMINYAI 134
>gi|254434266|ref|ZP_05047774.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani
AFC27]
gi|207090599|gb|EDZ67870.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani
AFC27]
Length = 148
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLKES 65
S R ++++ N+AN TP Y+A+DI ++ + Q + TH H+ S
Sbjct: 37 SRRAEVLAANLANGDTPGYKARDIDFKAALQQAQGQGLPLQATHAGHVSHS 87
>gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
HTCC2516]
gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
HTCC2516]
Length = 128
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S R + VSENIAN+ TP YR K + +F L +S + AH
Sbjct: 19 SARLRHVSENIANSDTPGYRRKTV-TFRDAFGATAGEVAVGPVRLDDSALERIFDPAH-- 75
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
PL +G G+ V + E+ + + YE N K+ +++ M
Sbjct: 76 --PLADESG-HFEGSNVDLLIEIADAREAQRSYEANLKMFEQVRQM 118
>gi|224373714|ref|YP_002608086.1| flagellar basal body rod protein FlgB [Nautilia profundicola AmH]
gi|223588710|gb|ACM92446.1| flagellar basal-body rod protein FlgB [Nautilia profundicola AmH]
Length = 143
Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI---LNQNF--------LMA 55
F I + ++ RQ +++ NIANA TP YR KDI E + +++ F +A
Sbjct: 9 FDILEKSLHYRKIRQDMIASNIANADTPYYRPKDIRFEEALQAEVDKKFNIRTAPKLELA 68
Query: 56 RTHETHLKESDSSG 69
+T H+ D S
Sbjct: 69 KTEPGHMAAPDESS 82
>gi|291288219|ref|YP_003505035.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
DSM 12809]
gi|290885379|gb|ADD69079.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
DSM 12809]
Length = 136
Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHLKESDSSGLHW 72
S + +++ENIAN TP Y+A+D+ ++ + + + RT+E HL + G+
Sbjct: 21 SVKNGVIAENIANKDTPGYKAQDLEFYDVMDEVLGTGKKLPLTRTNEKHLPPA-GRGVDP 79
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNEL 100
++ V + V+ GN V + E+
Sbjct: 80 SSFVYQQ---NNPSVRNDGNDVNVDYEM 104
>gi|212637782|ref|YP_002314307.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
WP3]
gi|212559266|gb|ACJ31720.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
WP3]
Length = 116
Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
I Q ++ ER K+++ N+ANA TP Y+A+D+ F+ +++Q
Sbjct: 11 IHPQTLDFRVERSKMLAGNLANAETPGYKARDL-DFKAVMSQ 51
>gi|15612532|ref|NP_224185.1| flagellar basal body rod protein FlgB [Helicobacter pylori J99]
gi|4156088|gb|AAD07041.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
Length = 140
Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|332674371|gb|AEE71188.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 83]
Length = 140
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|188528351|ref|YP_001911038.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Shi470]
gi|188144591|gb|ACD49008.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Shi470]
Length = 140
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|104782846|ref|YP_609344.1| flagellar basal body rod protein FlgB [Pseudomonas entomophila
L48]
gi|95111833|emb|CAK16557.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudomonas entomophila L48]
Length = 135
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+ ++R ++++ NIANA TPNY+A+D+ F ++L
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDM-DFSSVL 49
>gi|114562339|ref|YP_749852.1| flagellar basal body rod protein FlgB [Shewanella frigidimarina
NCIMB 400]
gi|114333632|gb|ABI71014.1| flagellar basal-body rod protein FlgB [Shewanella frigidimarina
NCIMB 400]
Length = 132
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 15/89 (16%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN---- 73
++R +++S NIANA+TP+Y+A+D+ +F + + A +H+ L S ++ H++
Sbjct: 20 AQRAEVISSNIANANTPHYKAQDV-NFASAMQ----AASSHQKGLSMSQTTEKHFDLTAL 74
Query: 74 --AHV-IEAPLDQTTGVQVSGNTVGITNE 99
HV P TG GNTV E
Sbjct: 75 SQQHVQYRMPNQADTG---DGNTVDTQKE 100
>gi|317011795|gb|ADU85542.1| flagellar basal body rod protein FlgB [Helicobacter pylori
SouthAfrica7]
Length = 140
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|108563933|ref|YP_628249.1| flagellar basal body rod protein FlgB [Helicobacter pylori HPAG1]
gi|107837706|gb|ABF85575.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
Length = 140
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|317182785|dbj|BAJ60569.1| flagellar basal body rod protein FlgB [Helicobacter pylori F57]
Length = 140
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|121997322|ref|YP_001002109.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
SL1]
gi|121588727|gb|ABM61307.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
SL1]
Length = 135
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETHL 62
F + Q ER ++++ NIANA TP Y+A+D+ E + Q + T H+
Sbjct: 9 FSVPEQAMRLRGERNELLASNIANADTPGYKARDMDFREAMRQASEPQPQPLQATSPQHV 68
Query: 63 KESDSSGL 70
+ SS +
Sbjct: 69 QPPPSSSM 76
>gi|207091984|ref|ZP_03239771.1| flagellar basal body rod protein FlgB [Helicobacter pylori
HPKX_438_AG0C1]
Length = 140
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|261840252|gb|ACY00018.1| flagellar basal body rod protein FlgB [Helicobacter pylori 52]
Length = 140
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|254780091|ref|YP_003058198.1| flagellar basal body rod protein FlgB [Helicobacter pylori B38]
gi|254002004|emb|CAX30263.1| Flagellar basal-body rod protein DlgB [Helicobacter pylori B38]
Length = 140
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|203284215|ref|YP_002221955.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
gi|201083658|gb|ACH93249.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
Length = 135
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS---S 68
++ + L RQ +V++NIAN TPN++ + +FE L + L +T+ L ++
Sbjct: 13 RYLDVLGLRQSVVADNIANVDTPNFKRSKV-TFEAELERAILNEKTNNLSLIRGNNKHLD 71
Query: 69 GLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
G ++ P LD + + +GN V I +E+ + +Y L T +
Sbjct: 72 GFKELGYLDVKPQRMLDHLSTLNNNGNNVDIDSEMKSLVQNQMMYGLFTNI 122
>gi|308183714|ref|YP_003927841.1| flagellar basal body rod protein FlgB [Helicobacter pylori
PeCan4]
gi|308065899|gb|ADO07791.1| flagellar basal body rod protein FlgB [Helicobacter pylori
PeCan4]
Length = 140
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|261838847|gb|ACX98613.1| flagellar basal-body rod protein [Helicobacter pylori 51]
Length = 140
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|217033828|ref|ZP_03439253.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
gi|216943726|gb|EEC23169.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
gi|297380733|gb|ADI35620.1| flagellar basal-body rod protein FlgB [Helicobacter pylori v225d]
gi|308062842|gb|ADO04730.1| flagellar basal body rod protein FlgB [Helicobacter pylori Cuz20]
Length = 140
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|315585966|gb|ADU40347.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 35A]
gi|317178282|dbj|BAJ56071.1| flagellar basal body rod protein FlgB [Helicobacter pylori F16]
Length = 140
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|119469947|ref|ZP_01612752.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Alteromonadales bacterium TW-7]
gi|119446657|gb|EAW27930.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Alteromonadales bacterium TW-7]
Length = 135
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
S+R ++++ NIANA TP Y+AKDI
Sbjct: 20 SQRAEVLASNIANADTPGYKAKDI 43
>gi|296127541|ref|YP_003634793.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM
12563]
gi|296019357|gb|ADG72594.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM
12563]
Length = 142
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+A + N R +++++NIAN STPN++ D+ +FE L + + K +DS
Sbjct: 15 VAKKLLNVYGLRAEVIADNIANVSTPNFKRSDV-TFEYQLARALDSEKYDGMEAKRTDSR 73
Query: 69 GLHWNAHVIE-----AP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ H+ AP +D T + N V I E+ + Y++ T+++
Sbjct: 74 --HFPFHMPMNYQDVAPTLTVDYDTSYRNDKNNVDIDKEMAEEAKNTLRYQMFTQIV 128
>gi|116619478|ref|YP_821634.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter
usitatus Ellin6076]
gi|116222640|gb|ABJ81349.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter
usitatus Ellin6076]
Length = 136
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDI 41
++ + LS RQK+V+ NIANA TP Y +D+
Sbjct: 37 RYMDLLSARQKLVASNIANADTPGYLTQDL 66
>gi|317181262|dbj|BAJ59048.1| flagellar basal body rod protein FlgB [Helicobacter pylori F32]
Length = 140
Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|317013373|gb|ADU83981.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Lithuania75]
Length = 140
Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|210135738|ref|YP_002302177.1| flagellar basal body rod protein FlgB [Helicobacter pylori P12]
gi|210133706|gb|ACJ08697.1| flagellar basal-body rod protein FlgB [Helicobacter pylori P12]
gi|317179761|dbj|BAJ57549.1| flagellar basal body rod protein FlgB [Helicobacter pylori F30]
Length = 140
Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|296157459|ref|ZP_06840294.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
gi|295892231|gb|EFG72014.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
Length = 164
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
F + + + RQ+++S NIANA TP Y+A+D+
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDV 43
>gi|307638244|gb|ADN80694.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
gi|325996837|gb|ADZ52242.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
gi|325998429|gb|ADZ50637.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
Length = 140
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L +
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVLAE 49
>gi|313624694|gb|EFR94651.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL J1-023]
Length = 133
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+L ++VS NIANA+TPN++A + +SFE + R+ ++ ES + N
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESFGASL---RSSGSNNIESTGNLTKTNT 68
Query: 75 -HVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H+ LD+T + GN V +T+E+ +Y L + NS +
Sbjct: 69 KHLAGTDLDETNAKLTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSSIN 127
Query: 126 HVVRG 130
RG
Sbjct: 128 TAARG 132
>gi|317014994|gb|ADU82430.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Gambia94/24]
Length = 140
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|109948141|ref|YP_665369.1| flagellar basal body rod protein FlgB [Helicobacter acinonychis
str. Sheeba]
gi|109715362|emb|CAK00370.1| flagellar basal-body rod protein FlgB [Helicobacter acinonychis
str. Sheeba]
Length = 140
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 7 FGLVYRALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVL 47
>gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus
denitrificans BC]
gi|330826752|ref|YP_004390055.1| flagellar basal-body rod protein FlgB [Alicycliphilus
denitrificans K601]
gi|317119097|gb|ADV01586.1| flagellar basal-body rod protein FlgB [Alicycliphilus
denitrificans BC]
gi|329312124|gb|AEB86539.1| flagellar basal-body rod protein FlgB [Alicycliphilus
denitrificans K601]
Length = 138
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDI 41
H N L SERQ+ ++ NIANA TP Y A+D
Sbjct: 12 HGNALLLRSERQRAIASNIANADTPGYVARDF 43
>gi|307731366|ref|YP_003908590.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
gi|307585901|gb|ADN59299.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
Length = 163
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + + RQ+++S NIANA TP Y+A+D+ A + LK++
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDVD-----------FASSLAGALKKTG 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
++G H ++ + Q GV T G++ GH+
Sbjct: 58 AAG-HTASNTATLAMAQPAGV-----TSGMSMAATAPGHL 91
>gi|2105145|gb|AAB57896.1| FlgB [Treponema denticola]
Length = 139
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ----------NFLMARTHETHLKESDS 67
S R + S N+AN+ PN++ ++ +FE+ L + F +A TH H+K ++
Sbjct: 21 SLRYTVTSNNLANSDVPNFKRTEV-NFESELKRAFDSEKNAKGAFQLATTHPLHIKSNEP 79
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + + LD T + +GN V +E K I+ Y+L
Sbjct: 80 --IDYKTVSLCVVLDYLTAEKANGNNVNPEDEAMKVLKIQMQYQL 122
>gi|94500238|ref|ZP_01306771.1| flagellar basal body rod protein [Oceanobacter sp. RED65]
gi|94427537|gb|EAT12514.1| flagellar basal body rod protein [Oceanobacter sp. RED65]
Length = 131
Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETHL 62
R +I++ N+ANA TP+Y+A+DI F +L+ ++ M +TH+ H+
Sbjct: 23 RAEILANNLANADTPHYKARDI-DFNAMLDGAMSSRSIGMEKTHKAHI 69
>gi|26991080|ref|NP_746505.1| flagellar basal body rod protein FlgB [Pseudomonas putida KT2440]
gi|24986115|gb|AAN69969.1|AE016635_5 flagellar basal-body rod protein FlgB [Pseudomonas putida KT2440]
Length = 136
Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+ ++R ++++ NIANA TPNY+A+D+ F ++L
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDM-DFASVL 49
>gi|86750886|ref|YP_487382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
HaA2]
gi|86573914|gb|ABD08471.1| flagellar basal-body rod protein FlgB [Rhodopseudomonas palustris
HaA2]
Length = 145
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA- 74
W ERQK+++EN++N+ TP ++ +D+ + + L A + L +S H A
Sbjct: 27 WHQERQKVLAENVSNSDTPGFQPRDLVA-PKFNSAGQLTASSAGGALPMMMTSASHMKAP 85
Query: 75 -HVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKL 116
+ D+ G Q +GN V + +++ K + Y T L
Sbjct: 86 GGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSANQMDYAAATSL 130
>gi|90408057|ref|ZP_01216228.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3]
gi|90310814|gb|EAS38928.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3]
Length = 133
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETH 61
S R +I++ N+ NA TP+Y+A+D++ E +L+ ++RT+E H
Sbjct: 20 SRRAEILASNLTNADTPDYKARDLNFKEALLSARSGSGISLSRTNEIH 67
>gi|47091673|ref|ZP_00229469.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
4b H7858]
gi|226223341|ref|YP_002757448.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
Clip81459]
gi|254824010|ref|ZP_05229011.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J1-194]
gi|47019992|gb|EAL10729.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
4b H7858]
gi|225875803|emb|CAS04506.1| Putative flagellar basal-body rod protein FlgB [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293593238|gb|EFG00999.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J1-194]
gi|328467275|gb|EGF38355.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 1816]
Length = 133
Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDIS---SFETIL---NQNFL-----MARTHETHLK 63
N+L ++VS NIANA+TPN++A + S SF + L QN + +T+ HL
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSTESAGNLTKTNTKHLA 72
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+D NA V ++ + GN V +T+E+ +Y L + NS
Sbjct: 73 GTDID--ETNAKVTT----KSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSS 125
Query: 124 VMHVVRG 130
+ RG
Sbjct: 126 INTAARG 132
>gi|116872099|ref|YP_848880.1| flagellar basal body rod protein FlgB [Listeria welshimeri serovar
6b str. SLCC5334]
gi|116740977|emb|CAK20097.1| flagellar basal-body rod protein FlgB [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 133
Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+L ++VS NIANA+TPN++A + +SFE + R + ES + NA
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESFGSSL---RASGGNSIESTGNLTKTNA 68
Query: 75 -HVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H+ LD+T + GN V +++E+ +Y L + NS +
Sbjct: 69 KHLAGTDLDETNAKLTTKSGSINEDGNNVNVSSEMISLTKNNQMYALAISAL-NYNSSIN 127
Query: 126 HVVRG 130
RG
Sbjct: 128 TAARG 132
>gi|239995128|ref|ZP_04715652.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii ATCC
27126]
Length = 144
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 12/63 (19%)
Query: 18 SERQKIVSENIANASTPNYRAKDI------------SSFETILNQNFLMARTHETHLKES 65
+ER +++S N+ANA+TP Y+A+DI +S T + + M RT++ HL +
Sbjct: 20 TERMEVISGNLANANTPGYKARDIDFNKAMQSAMREASGGTANHASSGMVRTNDRHLSGN 79
Query: 66 DSS 68
+S
Sbjct: 80 STS 82
>gi|217077496|ref|YP_002335214.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
TCF52B]
gi|217037351|gb|ACJ75873.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
TCF52B]
Length = 127
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQ 50
+RQ+I S+NIANA TPNY+ K I FE +LN+
Sbjct: 18 KRQEIHSQNIANAETPNYKRKYI-VFEELLNE 48
>gi|224417698|ref|ZP_03655704.1| flagellar basal body rod protein FlgB [Helicobacter canadensis
MIT 98-5491]
gi|253827047|ref|ZP_04869932.1| flagellar basal body rod protein [Helicobacter canadensis MIT
98-5491]
gi|313141241|ref|ZP_07803434.1| flagellar basal body rod protein FlgB [Helicobacter canadensis
MIT 98-5491]
gi|253510453|gb|EES89112.1| flagellar basal body rod protein [Helicobacter canadensis MIT
98-5491]
gi|313130272|gb|EFR47889.1| flagellar basal body rod protein FlgB [Helicobacter canadensis
MIT 98-5491]
Length = 144
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+A + ++ S R+ +++ NIAN STP YR KDI +FE ++
Sbjct: 12 LAQEALDYRSLRRDMIAGNIANVSTPMYRPKDI-NFEQMM 50
>gi|328475671|gb|EGF46420.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 220]
Length = 139
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 17/97 (17%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDIS---SFETIL---NQNFL-----MARTHETHLK 63
N+L ++VS NIANA+TPN++A + S SF + L QN + + +T+ HL
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHLA 72
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+D NA V ++ + GN V +T+E+
Sbjct: 73 GTDID--ETNAKVT----TKSGSINEDGNNVNVTSEM 103
>gi|225849146|ref|YP_002729310.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643923|gb|ACN98973.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 122
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
++ +++ ER K++ NIAN +TP Y+ KD+ FE + M T+ H+ + S +
Sbjct: 9 NKMSSFYFERFKVIQGNIANVNTPFYKPKDL-KFEEVFKNFIPMKLTNPKHINPAGSEDI 67
>gi|134280730|ref|ZP_01767440.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
gi|125657215|gb|ABN48703.1| flagellar basal body protein [Burkholderia pseudomallei]
gi|134247752|gb|EBA47836.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
Length = 124
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 38/123 (30%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ER K+++ N+AN TP YRA+D+ + L E+ G H
Sbjct: 20 AERTKVIASNLANLDTPGYRARDLD---------------FKRSLAEAGGDGAHAR---- 60
Query: 78 EAPLDQTTG-----------VQVSGNTV--GITNELYKSGHIKY---LYELNTKLIKKLN 121
P D TG GNTV GI + + + L LNTK IK L
Sbjct: 61 --PGDALTGGVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTK-IKGLQ 117
Query: 122 SMV 124
+ +
Sbjct: 118 TAI 120
>gi|58582192|ref|YP_201208.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84624085|ref|YP_451457.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|58426786|gb|AAW75823.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368025|dbj|BAE69183.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 132
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 13 HANWLS---ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLK 63
H + L+ +R K+++ N++N TP Y+AKD+ +FE L LM T H
Sbjct: 12 HGDALALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTDAKHYA 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNS 122
G N I DQ + + GNTV E G Y + ++ K+ S
Sbjct: 71 ---VGGGGLNPFQITRESDQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRS 124
Query: 123 MVMHVV 128
M+ +
Sbjct: 125 MLTAIT 130
>gi|85710161|ref|ZP_01041226.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
gi|85688871|gb|EAQ28875.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
Length = 117
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T F I S+R +++ NIANA+TP ++A+D+ F LN R E
Sbjct: 4 TIFGIHGAALELRSQRMGVIASNIANAATPGFKARDM-DFNAALNARLETQRGAPAAFGE 62
Query: 65 SD 66
+
Sbjct: 63 PE 64
>gi|264678617|ref|YP_003278524.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|299533500|ref|ZP_07046879.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
S44]
gi|262209130|gb|ACY33228.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|298718507|gb|EFI59485.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
S44]
Length = 127
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 19 ERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHL 62
+R ++++ NIANA TP Y+AKDI ++ E Q + T+++HL
Sbjct: 16 KRMEVLASNIANADTPGYQAKDIDFKAALEETQRQMLTVQSTNKSHL 62
>gi|152975155|ref|YP_001374672.1| flagellar basal body rod protein FlgB [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023907|gb|ABS21677.1| flagellar basal-body rod protein FlgB [Bacillus cytotoxicus NVH
391-98]
Length = 135
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHE 59
+ N+L ++ +S NI+NA+TP Y+A+D++ E + L N + +T++
Sbjct: 11 YMNYLVTKRNTISNNISNANTPGYKAQDVTFSEQMQMSNELYKKNASDLKTNSSLYQTNK 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
HL ++ + A + E + V GN+V +T E+
Sbjct: 71 LHLPTANVKNTY--AKIQEKSMQ----VNKDGNSVDVTTEM 105
>gi|226944489|ref|YP_002799562.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
gi|226719416|gb|ACO78587.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
Length = 136
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI 41
N SER ++++ N+ANA TP +RA+D
Sbjct: 17 NLRSERHQVLAANVANADTPEFRARDF 43
>gi|126668555|ref|ZP_01739509.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
gi|126626960|gb|EAZ97603.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
Length = 136
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSS--GL 70
+R +I++ N+ANA TP ++A+DI F+ I+ + F M T+ H+ E + L
Sbjct: 21 QRAEILANNLANADTPGFKARDI-DFQAIMKRAQSNASGFGMNTTNSGHITEGGGAPGSL 79
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
N + P + V GNTV E
Sbjct: 80 GDNDLLYRTPHQPS----VDGNTVDAQQE 104
>gi|183220164|ref|YP_001838160.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189910284|ref|YP_001961839.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167774960|gb|ABZ93261.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778586|gb|ABZ96884.1| Flagellar basal-body rod protein FlgB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 143
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG-------- 69
++R+K++++NIANA PN++ ++ FE++L + + + + S
Sbjct: 22 TQRRKVITDNIANADVPNFKRSEV-VFESMLKRAIESEKIEKEKAVPTKISNDRHIEFFK 80
Query: 70 -LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L + + LD T ++ GN V I E+ ++ + Y L +I +LN
Sbjct: 81 PLDYRDAKPKTNLDYLTTMRPDGNNVDIEKEVVEANQNQMSYSL---MIDRLN 130
>gi|330839540|ref|YP_004414120.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
gi|329747304|gb|AEC00661.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
Length = 137
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHETHLKESDSSGLH 71
RQ+++S NIAN +TPN++ ++ FE +L + + RTH+ H+ S
Sbjct: 24 RQEVISHNIANVNTPNFKKSNV-VFEDLLAKELDLDAEGGLKIVRTHDRHMPIS-----F 77
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+ + LD+++ ++ N V I E+
Sbjct: 78 RGRALAKIELDKSSSMRYDNNNVDIDVEM 106
>gi|255030210|ref|ZP_05302161.1| flagellar basal body rod protein FlgB [Listeria monocytogenes LO28]
Length = 107
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
N+L ++VS NIANA+TPN++A + +SFE L + R + ES + N
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSL---RASGQNSAESAGNLTKTNT 68
Query: 75 -HVIEAPLDQTTG--------VQVSGNTVGITNEL 100
H+ +D+T + GN V +T+E+
Sbjct: 69 KHLAGTDIDETNAKVTTKSGSINEDGNNVNVTSEM 103
>gi|229826299|ref|ZP_04452368.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
49176]
gi|229789169|gb|EEP25283.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
49176]
Length = 131
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
+ A+WL R ++S NIAN TP Y+ KD+ FE+ L + + + +D L
Sbjct: 16 AADASWL--RNNLISNNIANNDTPGYKRKDV-QFESYLAMELIRGGSLRHRVANADLDRL 72
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
A+ A L + GN V I E YL E + L+SM R
Sbjct: 73 DGIAYTDYASL----SYRADGNNVDIHTE------NTYLAENQIRYYTLLDSMTQEFSR 121
>gi|254519425|ref|ZP_05131481.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA]
gi|226913174|gb|EEH98375.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA]
Length = 141
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFE---TILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R+K+++ N+AN +T +++ K SFE T Q F + +T + HL N +
Sbjct: 32 REKVIANNMANINTKDFK-KSYVSFEENLTKATQEFSLKKTKKEHLNR------ELNDSL 84
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSMVMHVVRG 130
I D++T ++ GN V + E +Y L T+ KLN M V+ G
Sbjct: 85 ISVKQDKSTSMRTDGNNVDMDLEKVNQAANTLMYNALITQANSKLN-MTKSVISG 138
>gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
168]
gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
168]
Length = 131
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKD---ISSFETILNQN 51
S+R + +++NIAN TPNY+ KD +S+ ++I +QN
Sbjct: 16 SKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQN 52
>gi|189426356|ref|YP_001953533.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
gi|189422615|gb|ACD97013.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
Length = 146
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------NQNF 52
T + + + + Q ++S NIANA TP Y K + FE L + F
Sbjct: 9 TTIDVLGKSIDLRTRNQNLISSNIANAETPGYTPKSL-EFEQQLQSAVKKSTTRRGDSQF 67
Query: 53 LMARTHETH--LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
A TH H L+ V+E P +T G GN+V + NE+ + + L+
Sbjct: 68 SGATTHPAHIPLRGGGERISQVRGTVVETPA-KTPG--RDGNSVEMENEMSRMMQNQVLF 124
Query: 111 ELNTKLIKK 119
+ +L+ K
Sbjct: 125 NASVQLLSK 133
>gi|49077262|gb|AAT49657.1| PA1077 [synthetic construct]
Length = 136
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
I Q ++ ++R ++++ N+ANA TPNY+A+D+ F +L
Sbjct: 11 IHQQALSFRAQRAEVLANNLANADTPNYKARDL-DFAAVL 49
>gi|15596274|ref|NP_249768.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
PAO1]
gi|107100522|ref|ZP_01364440.1| hypothetical protein PaerPA_01001547 [Pseudomonas aeruginosa
PACS2]
gi|116049006|ref|YP_792192.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218892959|ref|YP_002441828.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
LESB58]
gi|254234213|ref|ZP_04927536.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
C3719]
gi|254239435|ref|ZP_04932757.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
2192]
gi|296390559|ref|ZP_06880034.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
PAb1]
gi|313106032|ref|ZP_07792291.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
39016]
gi|9946993|gb|AAG04466.1|AE004539_8 flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
PAO1]
gi|115584227|gb|ABJ10242.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166144|gb|EAZ51655.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
C3719]
gi|126192813|gb|EAZ56876.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
2192]
gi|218773187|emb|CAW28999.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
LESB58]
gi|310878793|gb|EFQ37387.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
39016]
Length = 135
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
I Q ++ ++R ++++ N+ANA TPNY+A+D+ F +L
Sbjct: 11 IHQQALSFRAQRAEVLANNLANADTPNYKARDL-DFAAVL 49
>gi|317153715|ref|YP_004121763.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis
Aspo-2]
gi|316943966|gb|ADU63017.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis
Aspo-2]
Length = 136
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETH 61
Q+ ++ + ERQ +V NI+N TP Y+A+ + FE L Q M RT ++H
Sbjct: 10 QLTAKVLDLRLERQNVVMGNISNVDTPEYKARRL-EFEDKLQQALNHDARGKMTRTQQSH 68
Query: 62 L 62
L
Sbjct: 69 L 69
>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3]
Length = 135
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLKESDSSGLHWNAHVI 77
R + VSENI+NA TP YR K + FE ++ + R T L + +H
Sbjct: 26 RLRHVSENISNADTPGYRRKTV-PFEVERGRDDGVERVTTGRVKLDRRQLPDIFDPSH-- 82
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
PL TG G+ V + E+ + + YE N KL +++++ +M ++R
Sbjct: 83 --PLADETG-HYQGSNVDLMIEIADAREAQRSYEANLKLFDQARQMSASLMELLR 134
>gi|77460472|ref|YP_349979.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
Pf0-1]
gi|77384475|gb|ABA75988.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Pseudomonas fluorescens Pf0-1]
Length = 135
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+ ++R ++++ NIANA TPNY+A+D+ F +L
Sbjct: 18 FRAQRAEVLANNIANADTPNYKARDL-EFSKVL 49
>gi|255017933|ref|ZP_05290059.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
F2-515]
Length = 96
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 19/98 (19%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETHL 62
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ HL
Sbjct: 2 NYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSTESAGNLTKTNTKHL 60
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+D NA V ++ + GN V +T+E+
Sbjct: 61 AGTDID--ETNAKVTT----KSGSINEDGNNVNVTSEM 92
>gi|54308094|ref|YP_129114.1| flagellar basal body rod protein FlgB [Photobacterium profundum
SS9]
gi|46912520|emb|CAG19312.1| putative polar flagellar FlgB [Photobacterium profundum SS9]
Length = 131
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA--- 74
+R +I++ NIANA+TP Y+AKD+ L A T ++ S ++G H +A
Sbjct: 20 GKRAEILASNIANANTPGYKAKDMDFGRA------LKAATSGANIGLSQTNGRHISASAN 73
Query: 75 ----HVIEAPLDQTTGVQVSGNTV 94
+ P TG GNTV
Sbjct: 74 IMGEQMYRVPTQPDTG---DGNTV 94
>gi|115523570|ref|YP_780481.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisA53]
gi|115517517|gb|ABJ05501.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisA53]
Length = 136
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDI--SSFETILNQ-------NFLMARTHETHLKESD 66
W ERQ+++++NIAN+ TP ++ +D+ F+ + M RT H+ +
Sbjct: 18 WHQERQRVLADNIANSDTPAFKPRDLIEPKFDASGRPAAGSPIGSLPMMRTSTAHI--AP 75
Query: 67 SSGLHWNAHVIEAPLDQTTGVQV--SGNTVGITNELYKSGHIKYLYELNTKL 116
G A D+ G Q +GN V + +E+ K + Y T L
Sbjct: 76 PGGTESFAP------DRKGGFQTRPTGNAVNLEDEMLKVSSNQGSYAAATAL 121
>gi|224437871|ref|ZP_03658818.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
18818]
gi|313144320|ref|ZP_07806513.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
18818]
gi|313129351|gb|EFR46968.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
18818]
Length = 144
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 27/130 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------------FLM 54
+ + + ++ S RQ +++ NIAN TP YR KD++ + + +N +
Sbjct: 10 YSVVYKALDYRSIRQDMIASNIANVDTPFYRPKDVNFEQYLARENKRIFGTGERSYKLDI 69
Query: 55 ARTHETHLKE----SDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
A+T + HL DS+ + W + H+ + GN+V + E + G +
Sbjct: 70 AKTAKGHLDSRRNVKDSATMFWRDGHL----------AKNDGNSVDLDVETSEMGKNSTM 119
Query: 110 YELNTKLIKK 119
Y+ T +++
Sbjct: 120 YQALTSALRR 129
>gi|332531615|ref|ZP_08407512.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
19624]
gi|332038978|gb|EGI75407.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
19624]
Length = 161
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDI---SSFETILNQ 50
SERQ+ ++ NIAN TP Y+A+D S+ + L Q
Sbjct: 20 SERQRTIASNIANGDTPGYQARDFDFKSAMQEALGQ 55
>gi|197285513|ref|YP_002151385.1| flagellar basal body rod protein FlgB [Proteus mirabilis HI4320]
gi|227356004|ref|ZP_03840396.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
gi|194683000|emb|CAR43449.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
gi|227163992|gb|EEI48894.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
Length = 137
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + ++RQ+I++ NIANA TP ++A+DI F L + RT L+ +
Sbjct: 9 FHFQQEALSLRNKRQEILAANIANADTPGFQARDI-DFAAELKKTMENGRTGSHGLQLTM 67
Query: 67 SSGLHW---NAHVIEAPLDQTTGVQVS--GNTVGITNEL--YKSGHIKY 108
+S H + +EA L Q S GNTV + E + +KY
Sbjct: 68 TSERHIPIKPGYRLEADLLYRVPHQTSMDGNTVDMDMERSNFADNSVKY 116
>gi|260886628|ref|ZP_05897891.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
gi|260863771|gb|EEX78271.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
Length = 142
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHETHLKESDSSGLH 71
RQ+++S NIAN +TPN++ ++ FE +L + + RTH+ H+ S
Sbjct: 29 RQEVISHNIANVNTPNFKKSNV-VFEDLLAKELDLDAEGGLKIVRTHDRHMPIS-----F 82
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+ + LD+++ ++ N V I E+
Sbjct: 83 RGRALAKIELDKSSSMRYDNNNVDIDVEM 111
>gi|220904842|ref|YP_002480154.1| flagellar basal body rod protein FlgB [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869141|gb|ACL49476.1| flagellar basal-body rod protein FlgB [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 137
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 19 ERQKIVSENIANASTPNYRAKDIS---SFETILNQNF--LMARTHETHL 62
+RQ I++ N+AN TPNY+ +++S +T L Q+ M+RT H+
Sbjct: 21 DRQNIIAGNLANIDTPNYKPRELSFEKELQTALGQDMEGQMSRTSAEHI 69
>gi|20807892|ref|NP_623063.1| flagellar basal body protein [Thermoanaerobacter tengcongensis MB4]
gi|20516457|gb|AAM24667.1| Flagellar basal body protein [Thermoanaerobacter tengcongensis MB4]
Length = 131
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETI----LNQNFLMAR-THETHLKESDSSGLHWNA 74
R +++ NIAN TPN++ ++ FE I LN N L TH H+
Sbjct: 18 RSNVIANNIANVDTPNFKRSEV-KFEEILQEALNGNKLKGYITHPRHIPIGPPPIDSIKP 76
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK-YLYELNTKLIKKLNSMVMHVVRG 130
+ + TT +++ GN V I E+ + + Y Y L ++ +LNS++ V G
Sbjct: 77 EIYQV---NTTSMRLDGNNVDIDYEMSQLAKNQLYYYALVQRVSGELNSIMTAVKDG 130
>gi|332140543|ref|YP_004426281.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
'Deep ecotype']
gi|327550565|gb|AEA97283.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
'Deep ecotype']
Length = 144
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 21/25 (84%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS 42
+ER +++S N+ANA+TP Y+A+DI
Sbjct: 20 TERMEVISGNLANANTPGYKARDID 44
>gi|90577341|ref|ZP_01233152.1| flagellar basal body rod protein [Vibrio angustum S14]
gi|90440427|gb|EAS65607.1| flagellar basal body rod protein [Vibrio angustum S14]
Length = 120
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
Q ++ +R K+++ N+AN TP Y AKDI F+ I++Q
Sbjct: 14 QTLDFRVQRAKVLASNLANVDTPGYLAKDI-RFDAIVSQ 51
>gi|317010251|gb|ADU80831.1| flagellar basal body rod protein FlgB [Helicobacter pylori
India7]
Length = 140
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + + ++ + RQ +++ NIAN TP YR +D+ FE++L
Sbjct: 7 FGLVYKALDYRALRQDMIASNIANVDTPFYRPRDL-DFESVL 47
>gi|160880852|ref|YP_001559820.1| flagellar basal-body rod protein FlgB [Clostridium
phytofermentans ISDg]
gi|160429518|gb|ABX43081.1| flagellar basal-body rod protein FlgB [Clostridium
phytofermentans ISDg]
Length = 128
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
RQ+++S N+AN TPNY+ KD+ +FE+ L + + + +++ S L + + A
Sbjct: 23 RQELLSNNLANNDTPNYKRKDL-NFESYLKKELKGDEDLDKRVAKANLSKLDGSIYTDRA 81
Query: 80 PLDQTTGVQVSGNTVGITNE 99
L + GN V + E
Sbjct: 82 NL----SYRYDGNNVDVDVE 97
>gi|254182895|ref|ZP_04889488.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
gi|184213429|gb|EDU10472.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
Length = 131
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 38/123 (30%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ER K+++ N+AN TP YRA+D+ + L E+ G H
Sbjct: 27 AERTKVIASNLANLDTPGYRARDLD---------------FKRSLAEAGGDGAHAR---- 67
Query: 78 EAPLDQTTG-----------VQVSGNTV--GITNELYKSGHIKY---LYELNTKLIKKLN 121
P D TG GNTV GI + + + L LNTK IK L
Sbjct: 68 --PGDALTGGVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTK-IKGLQ 124
Query: 122 SMV 124
+ +
Sbjct: 125 TAI 127
>gi|251797448|ref|YP_003012179.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
gi|247545074|gb|ACT02093.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
Length = 132
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQN------FLMARTHETHLKESDSSGLHWN 73
RQ +V+ NIAN TPN++ ++ FE +L+Q RT+E H+ +SG+
Sbjct: 19 RQGVVANNIANVDTPNFKRSEV-LFEELLSQEMGGQTALQGKRTNERHIPIGRTSGIVPT 77
Query: 74 AHV 76
A +
Sbjct: 78 AQI 80
>gi|188576753|ref|YP_001913682.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188576944|ref|YP_001913873.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521205|gb|ACD59150.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521396|gb|ACD59341.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 117
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETHLKESDSSGLHW 72
+R K+++ N++N TP Y+AKD+ +FE L LM T H G
Sbjct: 6 QRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTDAKHYA---VGGGGL 61
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KLNSMVMHVV 128
N I DQ + + GNTV E G Y + ++ K+ SM+ +
Sbjct: 62 NPFQITRESDQPS---LDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTAIT 115
>gi|182412251|ref|YP_001817317.1| flagellar basal-body rod protein FlgB [Opitutus terrae PB90-1]
gi|177839465|gb|ACB73717.1| flagellar basal-body rod protein FlgB [Opitutus terrae PB90-1]
Length = 144
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS-SFETILNQNFLMARTHETHLKES 65
+Q+A + + RQ+ ++ N+ANA TP Y DI+ FE L + E
Sbjct: 25 YQLARKLLDAAVLRQEAIASNVANAETPGYHRLDIAPDFEAQLKSSLAAG--------EL 76
Query: 66 DSSGLHWNAHVIEAPLDQTT-GVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+SG ++E D T ++ GNTV I EL +E T+L+
Sbjct: 77 GTSGERLKPRLVE---DLTARSLRPDGNTVEIERELLAMNKNAVQHEYLTELV 126
>gi|167905087|ref|ZP_02492292.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
NCTC 13177]
Length = 134
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
+ER K+++ N+AN TP YRA+D+
Sbjct: 30 AERTKVIASNLANLDTPGYRARDL 53
>gi|326319094|ref|YP_004236766.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375930|gb|ADX48199.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 147
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDI 41
H N L +ERQ+ ++ NIANA TP Y A+D
Sbjct: 12 HGNALMLRAERQRAIASNIANADTPGYVARDF 43
>gi|83747657|ref|ZP_00944693.1| FlgB [Ralstonia solanacearum UW551]
gi|207728343|ref|YP_002256737.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
MolK2]
gi|207739740|ref|YP_002258133.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
IPO1609]
gi|83725709|gb|EAP72851.1| FlgB [Ralstonia solanacearum UW551]
gi|206591589|emb|CAQ57201.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
MolK2]
gi|206593122|emb|CAQ60028.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
IPO1609]
Length = 153
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
F Q S+R ++++ NIANA TP+Y+A+D F++ L +
Sbjct: 8 LFSFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQK 51
>gi|167750733|ref|ZP_02422860.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702]
gi|167656412|gb|EDS00542.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702]
gi|291532067|emb|CBK97652.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum 70/3]
gi|291558196|emb|CBL35313.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum V10Sc8a]
Length = 127
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+I Q + L ++Q+I+++NIAN TP Y K + F +L KE
Sbjct: 9 FRITEQGLSVLWQKQQIIAQNIANQDTPGYNCKYL-DFYAVLKDRMESTSVVGGKAKEG- 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGI---TNELYK 102
S + V E D T Q GN V + +NEL K
Sbjct: 67 SKQVELATRVYE---DTATNTQPDGNNVDVDSQSNELAK 102
>gi|158320509|ref|YP_001513016.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
OhILAs]
gi|158140708|gb|ABW19020.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
OhILAs]
Length = 131
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETHLKESDSS 68
A+W R ++++ NIANA TPN++ D+ FE +L ++ ++ T+ H+ +
Sbjct: 14 ASW--RRNEVITNNIANAETPNFKRSDV-IFEDVLREHLNASKLKGTITNANHIP---IN 67
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G H + D T ++ N V I E+ + + +Y L T I+ + +V+
Sbjct: 68 GGHLKDIQPQIKTDHTYSARIDNNNVEIDVEMAERAKNEIMYNLLTTRIQSGFKKIKYVI 127
>gi|56130699|ref|YP_145602.1| putative flagellar basal-body rod protein [Ralstonia
metallidurans CH34]
gi|94152373|ref|YP_581780.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|187928838|ref|YP_001899325.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
gi|56068689|emb|CAI11251.1| putative flagellar basal-body rod protein [Cupriavidus
metallidurans CH34]
gi|93358743|gb|ABF12830.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|187725728|gb|ACD26893.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
Length = 140
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILN------QNFL-MARTHETHLKES 65
+ R +++S NIANA TPNY+A+DI F L+ QNF M T H++ S
Sbjct: 25 TRRFELLSANIANADTPNYKARDI-DFSAELDRVMGSGQNFAGMTMTSPRHIEAS 78
>gi|152985328|ref|YP_001349653.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
PA7]
gi|150960486|gb|ABR82511.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
PA7]
Length = 135
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
I Q ++ ++R ++++ N+ANA TPNY+A+D+ F +L
Sbjct: 11 IHPQALSFRAQRAEVLANNLANADTPNYKARDL-DFGAVL 49
>gi|78355403|ref|YP_386852.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217808|gb|ABB37157.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 155
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTHETHLK---ESDSSG 69
+RQ ++ N+AN TP Y+A+++ FE L + ARTHE H+ + ++ G
Sbjct: 40 KRQNVIMSNMANVRTPGYKAREL-DFEKDLQAALSLGTEGKIARTHEKHVPATFDPETFG 98
Query: 70 LHW 72
W
Sbjct: 99 PEW 101
>gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
Length = 126
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R + VSENIANA TP Y K + SF+ ++ + A L S+ ++ H
Sbjct: 21 RLRHVSENIANADTPGYHRKTM-SFQEAMDGGTVEA--GPVRLDRSELVKIYDPGH---- 73
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
PL TG G+ V + E+ + + YE N K+ + M
Sbjct: 74 PLADETG-HYDGSNVDLVIEIADAREAQRSYEANLKMFDQARQM 116
>gi|241763741|ref|ZP_04761789.1| protein of unknown function DUF47 [Acidovorax delafieldii 2AN]
gi|241367046|gb|EER61431.1| protein of unknown function DUF47 [Acidovorax delafieldii 2AN]
Length = 215
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAK---DISSFETILNQ-----NFLMART 57
FF++ +QHA + E + S+ +AN S P+ R K D+ + E ++ N L+
Sbjct: 13 FFEMFNQHAERIVEAARAFSQLVANYSDPHLRDKYNQDVDNAERAADRVTQDVNRLI--- 69
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+T + D +H + ++ D +Q S T+ + + + + I L +L+ K
Sbjct: 70 HKTFITPIDREQIHTLINTMD---DVADLIQDSAETMALYDVHHMTDEITRLTDLSVKCC 126
Query: 118 KKLNSMV 124
++L V
Sbjct: 127 ERLRDAV 133
>gi|120613056|ref|YP_972734.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli
AAC00-1]
gi|120591520|gb|ABM34960.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli
AAC00-1]
Length = 147
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 13 HANWL---SERQKIVSENIANASTPNYRAKDI 41
H N L +ERQ+ ++ NIANA TP Y A+D
Sbjct: 12 HGNALMLRAERQRAIASNIANADTPGYVARDF 43
>gi|160903120|ref|YP_001568701.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
gi|160360764|gb|ABX32378.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
Length = 133
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAK 39
FQI + LS RQ ++S+NIAN TP Y+ K
Sbjct: 7 FQIIPNTMDALSLRQNVISQNIANYETPGYKRK 39
>gi|118475637|ref|YP_891881.1| flagellar basal body rod protein FlgB [Campylobacter fetus subsp.
fetus 82-40]
gi|118414863|gb|ABK83283.1| flagellar basal-body rod protein FlgB [Campylobacter fetus subsp.
fetus 82-40]
Length = 146
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
RQK+++ NIAN TP Y++KD+ FE+ L+A+ +E + K S L
Sbjct: 24 RQKLIASNIANIDTPFYKSKDV-DFESA-----LIAKKNEIYSKNSGEPKLEL 70
>gi|310816826|ref|YP_003964790.1| flagellar basal-body rod protein FlgB, putative
[Ketogulonicigenium vulgare Y25]
gi|308755561|gb|ADO43490.1| flagellar basal-body rod protein FlgB, putative
[Ketogulonicigenium vulgare Y25]
Length = 126
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
Q + F A+ A S+R + NIANA TP YRA+ I F
Sbjct: 3 QNLALFGTAADMAAHASQRINQTAINIANADTPGYRAQTIGGF 45
>gi|221069325|ref|ZP_03545430.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
KF-1]
gi|220714348|gb|EED69716.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
KF-1]
Length = 137
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL 48
+ERQ+ ++ NIANA TP Y A+D + E ++
Sbjct: 20 AERQRAIASNIANADTPGYVARDFNFREALM 50
>gi|126175149|ref|YP_001051298.1| flagellar basal body rod protein FlgB [Shewanella baltica OS155]
gi|125998354|gb|ABN62429.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS155]
Length = 134
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 21/25 (84%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS 42
++R +++S NIANA TP+Y+A+D+
Sbjct: 20 AQRAEVISSNIANADTPHYKARDVD 44
>gi|264676567|ref|YP_003276473.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|299531289|ref|ZP_07044699.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
S44]
gi|262207079|gb|ACY31177.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|298720696|gb|EFI61643.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
S44]
Length = 137
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL 48
+ERQ+ ++ NIANA TP Y A+D + E ++
Sbjct: 20 AERQRAIASNIANADTPGYVARDFNFREALM 50
>gi|153001475|ref|YP_001367156.1| flagellar basal body rod protein FlgB [Shewanella baltica OS185]
gi|160876206|ref|YP_001555522.1| flagellar basal body rod protein FlgB [Shewanella baltica OS195]
gi|217972595|ref|YP_002357346.1| flagellar basal body rod protein FlgB [Shewanella baltica OS223]
gi|304409981|ref|ZP_07391600.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
gi|307302306|ref|ZP_07582064.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
gi|151366093|gb|ABS09093.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS185]
gi|160861728|gb|ABX50262.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS195]
gi|217497730|gb|ACK45923.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS223]
gi|304351390|gb|EFM15789.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
gi|306914344|gb|EFN44765.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
gi|315268396|gb|ADT95249.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS678]
Length = 134
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 21/25 (84%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS 42
++R +++S NIANA TP+Y+A+D+
Sbjct: 20 AQRAEVISSNIANADTPHYKARDVD 44
>gi|317133492|ref|YP_004092806.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
YUAN-3]
gi|315471471|gb|ADU28075.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
YUAN-3]
Length = 125
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNF----LMA----------RTHETHLKE 64
+R ++S+N+ANA TP Y+ K + SFE L+Q L A + +
Sbjct: 22 QRSNVISDNVANADTPGYQQKSV-SFEDQLSQAISDGSLSAGELDSVSPQVQVESGTISS 80
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
SDS+G+ ++E +Q +Q S T G++++L
Sbjct: 81 SDSNGVDMETQMVELMRNQ---LQYSYLTRGVSDQL 113
>gi|147678427|ref|YP_001212642.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
gi|146274524|dbj|BAF60273.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
Length = 133
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 20 RQKIVSENIANASTPNYRAKDI---SSFETILNQNFL-MARTHETHLKESDSSGLHWNAH 75
R ++++ NIANA+TP ++ + S F+ L +N + MA TH H+ ++ L
Sbjct: 20 RHRVIANNIANANTPGFKKSAVEFESLFKEALGRNPVGMAVTHPRHMGKAP---LLSELQ 76
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+E ++ T ++ GN V I E+ Y+ + + + +++ +V+ G
Sbjct: 77 PVEK-INNATSMRTDGNNVDIDEEMVNLAANDIHYQAMARELSERYALLSYVITG 130
>gi|183598614|ref|ZP_02960107.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC
25827]
gi|188020793|gb|EDU58833.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC
25827]
Length = 137
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
F Q + RQ I++ NIANA TP Y+A+DI
Sbjct: 9 FAFQQQALSIREARQTILAANIANADTPGYQARDID 44
>gi|157959905|ref|YP_001499939.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
700345]
gi|157844905|gb|ABV85404.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
700345]
Length = 116
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
++ ER K+++ N+ANA TP Y+A+D+ F ++ Q
Sbjct: 17 DFRVERSKMLAGNLANAETPGYKARDL-DFNAVMTQ 51
>gi|260768786|ref|ZP_05877720.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
gi|260616816|gb|EEX42001.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
Length = 93
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+++ NIANA TPNY+AKD+ SF ++ +KE+ + G+ + + P+
Sbjct: 1 MLASNIANADTPNYKAKDV-SFNVVMT----------GLMKETSAIGIQTES-LYRIPVQ 48
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
++ GNTV + +E + Y+ + + +K S + + G
Sbjct: 49 RSR----DGNTVELQSEQARFAQNNMEYQQSLQFLKSKISGLKRAIEG 92
>gi|308050027|ref|YP_003913593.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
gi|307632217|gb|ADN76519.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
Length = 116
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
Q ++ ER K++S N+ANA TP Y A+D+ F ++ Q
Sbjct: 13 GQTLDFRVERAKVLSGNLANAETPGYLARDL-DFSRLMTQ 51
>gi|197335280|ref|YP_002156703.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11]
gi|197316770|gb|ACH66217.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11]
Length = 131
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
SER ++++ NIA A+TP Y+AK + Q L + T + + S + G H NA
Sbjct: 20 SERAEMLATNIAQANTPGYKAKGMDF------QKALQSATSKASMGLSRTDGRHINASTR 73
Query: 78 EA-------PLDQTTGVQVSGNTVGITNE 99
A P TG GNTV + E
Sbjct: 74 MAGEIQYRLPTQPDTG---DGNTVDVDLE 99
>gi|150021010|ref|YP_001306364.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
BI429]
gi|149793531|gb|ABR30979.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
BI429]
Length = 127
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+RQ+I S+NIANA TPNY+ K I FE + N++ + + T N H+
Sbjct: 18 KRQEIHSQNIANAETPNYKRKYI-VFEELFNESKMRLKLKTTS-----------NQHIKS 65
Query: 79 AP--------LDQTTGVQVSGNTVGITNEL 100
P + + T + GN V I E+
Sbjct: 66 VPDVVNLILKVQKNTSLTNDGNNVDIDVEI 95
>gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
Y25]
gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
Y25]
Length = 127
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T IA+ + R + SENIANA TP Y K +S N + A L
Sbjct: 6 TTLSIAASGMQAQASRMRFTSENIANADTPGYHRKLVSFRAAHANDGTVEA--SRVRLDR 63
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + ++ AH PL G SG+ V + E+ + YE N K+ ++ M
Sbjct: 64 APLAEIYDPAH----PLANDQG-NYSGSNVDLLIEIADAREASRSYEANLKVFDQVRQM 117
>gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
1003]
gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
1003]
Length = 131
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S R + VSENIANA TP Y K + FE + Q A E E D L A +
Sbjct: 19 SMRLRHVSENIANADTPGYHRK-VVRFEELAAQKDGGATGVELGPVELDQKEL---ARIY 74
Query: 78 E--APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHVVR 129
+ +PL G G+ V + E+ + + YE N ++ ++++S +M ++R
Sbjct: 75 DPGSPLADENGY-YDGSNVDLVVEIADARQAQRSYEANLRMFDQTRQMSSALMELLR 130
>gi|315281375|ref|ZP_07870012.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL
S4-120]
gi|313614972|gb|EFR88479.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL
S4-120]
Length = 133
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFE 45
N+L ++VS NIANA+TPN++A + +SFE
Sbjct: 13 NYLQTANQVVSSNIANANTPNFKASE-ASFE 42
>gi|258404781|ref|YP_003197523.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense
DSM 5692]
gi|257797008|gb|ACV67945.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense
DSM 5692]
Length = 136
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHETHLKESD 66
Q N + ++++ NIANA TP Y ++ + FE L F M THE H D
Sbjct: 16 QSLNLRARNHEMLTSNIANAETPGYASQHL-QFEEQLRAAFDPEAQKMEATHEDHFGFVD 74
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ VI P G VS N V + E+ + + YE +++ + + + +
Sbjct: 75 DIN-QVDGEVISDP-----GKAVSDNGVRMEQEMARLSENQIKYETAARILSRKFASLEY 128
Query: 127 VVR 129
V++
Sbjct: 129 VIQ 131
>gi|167626152|ref|YP_001676446.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
gi|167356174|gb|ABZ78787.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
Length = 116
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
++ ER K+++ N+ANA TP Y+A+D+ F++++ Q
Sbjct: 17 DFRVERSKMLAGNLANAETPGYKARDL-DFKSVMLQ 51
>gi|94987302|ref|YP_595235.1| flagellar basal body rod protein FlgB [Lawsonia intracellularis
PHE/MN1-00]
gi|94731551|emb|CAJ54914.1| Flagellar basal body protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 137
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETHL 62
+RQ ++ NIAN +TP YR + I FE L + M+RT E HL
Sbjct: 21 QRQNVIMSNIANVNTPRYRPRTI-EFEDQLQKALGLDMRGRMSRTEENHL 69
>gi|85858814|ref|YP_461016.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
gi|85721905|gb|ABC76848.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
Length = 128
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I S + S+R KI+ NIAN +P+Y+ KD + ++ A L +
Sbjct: 11 ILSGMLGFRSQRNKIILSNIANMDSPDYKPKDY-----VFKRDLSRAVADRGQLTLLKTD 65
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKY--LYELNTKLIKKLNSMV 124
G H A + E D V+ +G V + E+ H++Y E+ + K LN+++
Sbjct: 66 GKHLPADLNEISDDDFEVVE-TGKNVNMDTEMTHLAENHLRYNLTVEMLARKFKGLNTVL 124
>gi|256830789|ref|YP_003159517.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
DSM 4028]
gi|256579965|gb|ACU91101.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
DSM 4028]
Length = 136
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETI------LNQNFLMARTHETHL 62
+RQ IVS N+AN +TP Y+A+ + FE L+++ +ARTH H
Sbjct: 21 QRQNIVSANLANINTPGYKARTL-EFEKDLQAALGLSESGAVARTHPDHF 69
>gi|213963359|ref|ZP_03391615.1| glycogen debranching enzyme-related protein [Capnocytophaga
sputigena Capno]
gi|213954027|gb|EEB65353.1| glycogen debranching enzyme-related protein [Capnocytophaga
sputigena Capno]
Length = 648
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 25 SENIANASTPNYRAK-DISSFETILN---QNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
S+N+A T + + D +SFE L F++ + ET +K +G HW
Sbjct: 250 SKNLAKDFTKYLKERADRNSFEECLQYTASQFIIQKAGETRIK----AGYHWYDSTTRDT 305
Query: 81 LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G+ +SG+T I +E+ +S +KY Y N + + +++ +++ V
Sbjct: 306 FIALPGIALSGSTAKIFDEVLQSA-LKYCY--NGRFARDISTHIVNPV 350
>gi|268589985|ref|ZP_06124206.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM
1131]
gi|291314704|gb|EFE55157.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM
1131]
Length = 137
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
F Q + RQ +++ NIANA TP Y+A+DI
Sbjct: 9 FAFQQQALSIREARQTVLASNIANADTPGYQARDID 44
>gi|118581823|ref|YP_903073.1| flagellar basal-body rod protein FlgB [Pelobacter propionicus DSM
2379]
gi|118504533|gb|ABL01016.1| flagellar basal-body rod protein FlgB [Pelobacter propionicus DSM
2379]
Length = 140
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
I S++ + +++ +VS NIANA TPNY K + FE L N + T+
Sbjct: 11 IDILSKNIDLRAKQHNLVSSNIANAETPNYVPKAL-VFEDELQGAIKGNPTTTGSTTNPR 69
Query: 61 HLKESDSSG-LH-WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ G +H VIE+P +T G GN V + E+ + + LY + +++
Sbjct: 70 HIPLKGGGGTIHSVQGQVIESPA-KTPG--KDGNAVELEGEMSRMVENQILYNASVQILT 126
Query: 119 KLNSMVMHVVRG 130
K + ++G
Sbjct: 127 KKFEGLRTAIKG 138
>gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
BON]
gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
BON]
Length = 137
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI----LNQNFLMAR-THETHLK 63
+ S+ + L R +++S+N+AN TP ++A + +FE + L+ N L + T+ H+
Sbjct: 13 VLSKALDGLWMRNQVISDNVANVDTPGFKASKV-AFEDVLKGALDDNALKGKVTNIKHIP 71
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
S V+++ Q T +++ GN V I E+
Sbjct: 72 IGALSAKDVQPQVLQS---QNTSMRMDGNNVDIDLEM 105
>gi|16799793|ref|NP_470061.1| flagellar basal body rod protein FlgB [Listeria innocua
Clip11262]
gi|16413170|emb|CAC95950.1| lin0718 [Listeria innocua Clip11262]
gi|313620053|gb|EFR91568.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL
S4-378]
Length = 133
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFE 45
N+L ++VS NIANA+TPN++A + +SFE
Sbjct: 13 NYLQTANQVVSNNIANANTPNFKASE-ASFE 42
>gi|121596114|ref|YP_988010.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
gi|120608194|gb|ABM43934.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
Length = 151
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
SERQ+ ++ NIANA TP Y A+D
Sbjct: 33 SERQRAIASNIANADTPGYVARDF 56
>gi|90411002|ref|ZP_01219016.1| flagellar basal body protein [Photobacterium profundum 3TCK]
gi|90328215|gb|EAS44526.1| flagellar basal body protein [Photobacterium profundum 3TCK]
Length = 131
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKES 65
+R + ++ NIANA+TP Y+AKD+ F+ L N ++RT+ H+ S
Sbjct: 20 GKRAETLASNIANANTPGYKAKDM-DFDRALKAATSGANVGLSRTNGRHISAS 71
>gi|327441058|dbj|BAK17423.1| flagellar basal body protein [Solibacillus silvestris StLB046]
Length = 130
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
+ + + K +++NIAN TPNY+ K++ SF+ +LN
Sbjct: 17 YATMKNKTIAQNIANVDTPNYKTKEV-SFKDVLND 50
>gi|114330358|ref|YP_746580.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91]
gi|114307372|gb|ABI58615.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91]
Length = 136
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS--GLHWNAH 75
+ RQ+++S NIANA TP+++AKD + + QN R ++ L + S GL
Sbjct: 20 AARQELLSGNIANADTPSFKAKDFDFSKAM--QNVQSPRQVQSALATTSSRHIGLSDFRS 77
Query: 76 VIEAPLDQTTGVQ--VSGNTVGITNEL--YKSGHIKY 108
+ P Q + GNTV + E + I+Y
Sbjct: 78 ITSVPEQYRVPQQPSIDGNTVDMDTERMQFMDNAIRY 114
>gi|119715009|ref|YP_921974.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
gi|119535670|gb|ABL80287.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
Length = 118
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+ ++ RQ++ ++NIAN TP YRA + FET L
Sbjct: 18 DGIALRQRVTADNIANVDTPGYRASSV-DFETSL 50
>gi|222112269|ref|YP_002554533.1| flagellar basal-body rod protein flgb [Acidovorax ebreus TPSY]
gi|221731713|gb|ACM34533.1| flagellar basal-body rod protein FlgB [Acidovorax ebreus TPSY]
Length = 138
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
SERQ+ ++ NIANA TP Y A+D
Sbjct: 20 SERQRAIASNIANADTPGYVARDF 43
>gi|77918799|ref|YP_356614.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus DSM
2380]
gi|77544882|gb|ABA88444.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus DSM
2380]
Length = 141
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHL 62
+ S+ + ++Q++++ NIAN+ TP Y + SFE L NQ+ + + H
Sbjct: 13 VLSKVLDLRQQKQELIASNIANSQTPGYIPVQL-SFEEDLARALQNNQSAPGQPSDQPHP 71
Query: 63 K--ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ + GL I+ DQ G+ GN V + +L + LYE T+++ K
Sbjct: 72 RHIPIAAGGLDTLQGQIQRRPDQ--GLSNDGNGVDLDKQLIAQSENQLLYETTTQILSKK 129
Query: 121 NSMVMHVVR 129
S + +V +
Sbjct: 130 LSTLKYVCQ 138
>gi|148980305|ref|ZP_01815992.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
gi|145961324|gb|EDK26634.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
Length = 115
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILN 49
+R ++S NIAN TPNY+A D+ FE +L+
Sbjct: 20 DRAAVLSSNIANVDTPNYKAMDL-RFEAVLS 49
>gi|71907892|ref|YP_285479.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
gi|71847513|gb|AAZ47009.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
Length = 153
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
RQ++++ NIANA TP Y+A DI FE + + T L + +S H + + A
Sbjct: 38 RQQLIASNIANADTPGYKAVDI-DFEEAMRIAQSASPIPPTML--ATTSIGHISGEAVSA 94
Query: 80 ----PLDQTTGVQVS--GNTVGITNELYK---------------SGHIKYLYELNTKL 116
PL Q S GNTV + E K SGH K L EL L
Sbjct: 95 QPPYPLKYQVPSQDSADGNTVEMDVERTKFSENSIMYQFSVDRVSGHFKMLMELYQSL 152
>gi|89895708|ref|YP_519195.1| hypothetical protein DSY2962 [Desulfitobacterium hafniense Y51]
gi|89335156|dbj|BAE84751.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 129
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMARTHETHLKES--DSS 68
S R K+++ N+AN TP+++ D+ F+ +L + + T E HL+++ DSS
Sbjct: 17 SLRYKVLANNVANVDTPDFKRSDV-DFDLLLGEAMGQTGGELPLKVTSERHLQKTGFDSS 75
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
G V++A Q T + GN V I E+
Sbjct: 76 G------VVQA---QGTTYRNDGNNVDIDKEM 98
>gi|260222464|emb|CBA32054.1| Flagellar basal-body rod protein flgB [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 166
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 18 SERQKIVSENIANASTPNYRAKDI 41
+ERQ++++ NIANA TP Y +D
Sbjct: 40 AERQRVIASNIANADTPGYSGRDF 63
>gi|167948873|ref|ZP_02535947.1| Flagellar basal-body rod protein FlgB [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 127
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHLKE 64
+ R ++++ N+ANA TP Y+A+D F +L Q + TH +H+++
Sbjct: 16 ARRSELIASNLANADTPGYKARDF-DFHKVLQQAQGEPVRLRTTHPSHIQD 65
>gi|320354314|ref|YP_004195653.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus
DSM 2032]
gi|320122816|gb|ADW18362.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus
DSM 2032]
Length = 137
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKESDSSG 69
+ ++ Q+++ NIANA TP Y A+ SFE L Q T H+ + SS
Sbjct: 19 DLRAKNQEVIGSNIANAETPGYSAQAF-SFEDQLKSAMTGQGLHPVATRPDHIPLAPSS- 76
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
L A + D TTG+ N+V + E+ K + LYE ++KK S++ + +
Sbjct: 77 LEQVAGTVSRKRD-TTGIG-DENSVSVDQEMIKLSQNEILYEAAAAMLKKKLSLLKYAIN 134
Query: 130 G 130
G
Sbjct: 135 G 135
>gi|330720176|gb|EGG98565.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC2047]
Length = 108
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 23 IVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKESDSSGLHWNAHVI 77
+++ NIANA TP Y+++D+ F+ +L +Q + RT+ H + NA
Sbjct: 1 MLANNIANADTPGYQSRDM-DFKALLMQAKSDQGVNLKRTNSRHFSTA-------NAMET 52
Query: 78 EAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
A L T +Q V GNTV + E + ++ + + + + +M ++G
Sbjct: 53 GAGLQYRTPMQPSVDGNTVDLQMEQAEYAENALAFQTSFTFLNRKFTGLMKAIKG 107
>gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
Length = 130
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESDSSGLHWNAH 75
++R + VSENI+NA TP YR K + F + L + T L ++ + ++ H
Sbjct: 19 AKRLRHVSENISNADTPGYRRKTV-PFLAVRELQNDAEKVETGRVTLDRTELTNIYDPTH 77
Query: 76 VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM---VMHVVR 129
P+ TG G+ V + E+ + + Y+ N K+ ++ SM +M ++R
Sbjct: 78 ----PMADDTG-HYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRSMSASLMDLLR 129
>gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1]
gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1]
Length = 130
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL----MARTHETHLKE 64
+A+ ++R VSENIANA TP Y+ K I+SFE + + F RT L +
Sbjct: 10 VAASGMRAQTQRLTHVSENIANADTPGYQRK-ITSFE--VERGFSAVEGQVRTGPVRLDQ 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + +H P+ G G+ V + EL + YE N ++ ++ M
Sbjct: 67 TALPVIFDPSH----PMADEAG-SYEGSNVDLVIELADAREANRSYEANLRIFDQIRQM 120
>gi|160896082|ref|YP_001561664.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
gi|160361666|gb|ABX33279.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
Length = 160
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETI 47
+ERQ+ ++ NIANA TP Y A+D + E +
Sbjct: 43 AERQRAIASNIANADTPGYVARDFNFREAL 72
>gi|73539447|ref|YP_299814.1| flagellar basal body rod protein FlgB [Ralstonia eutropha JMP134]
gi|72122784|gb|AAZ64970.1| Flagellar basal-body rod protein FlgB [Ralstonia eutropha JMP134]
Length = 135
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++RQ +++ NIA+A TP Y+A+D F + L Q R + + S +S H A
Sbjct: 20 TQRQSVIASNIAHADTPGYKARDF-DFSSTLAQTMERGRRPD-GVSLSTTSVRHLPAQAP 77
Query: 78 ---EAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYELNTKLI-KKLNSMVMHV 127
+A L +Q V GNTV + E +E N ++ K+ +M+ +
Sbjct: 78 TRDDADLAYRIPLQSSVDGNTVEMDTERVAFADNSVHFESNLTVVSSKIKTMLAAI 133
>gi|83589620|ref|YP_429629.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
39073]
gi|83572534|gb|ABC19086.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
39073]
Length = 132
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSSGLHWN 73
RQ+ ++ NIAN +TP ++ + SFE L++ + RT+ HL SGL
Sbjct: 20 RQRTIAHNIANVNTPGFKRYQV-SFEDQLSRALGLEPGLPLYRTNPYHLP---PSGLELA 75
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNEL 100
V D +T ++ GN V I E+
Sbjct: 76 PQVSR---DTSTTMRQDGNNVDIDREM 99
>gi|120610560|ref|YP_970238.1| hypothetical protein Aave_1880 [Acidovorax citrulli AAC00-1]
gi|120589024|gb|ABM32464.1| protein of unknown function DUF47 [Acidovorax citrulli AAC00-1]
Length = 215
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAK---DISSFETILNQ-NFLMART-HET 60
FF++ +QHA+ + E + S+ +AN + P+ R K D+ + E ++ + RT H+T
Sbjct: 13 FFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADRVTHEVNRTLHKT 72
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D +H +I D +Q S T+ + + + + I L +L+ K ++L
Sbjct: 73 FITPIDREQIHS---LINTMDDVADLIQDSAETMALYDVRHMTEEISRLTDLSLKCCERL 129
Query: 121 NSMV 124
V
Sbjct: 130 RDAV 133
>gi|218133657|ref|ZP_03462461.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
43243]
gi|217991032|gb|EEC57038.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
43243]
Length = 131
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILN 49
WL R ++++ NIAN TP Y+ KD+ SFE LN
Sbjct: 21 WL--RNEVLTNNIANVDTPGYKRKDV-SFEKYLN 51
>gi|291519600|emb|CBK74821.1| flagellar basal-body rod protein FlgB [Butyrivibrio fibrisolvens
16/4]
Length = 132
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES---- 65
+ A+W RQ ++ N+AN TP Y+ KDI F ++L + + THE L +
Sbjct: 15 CAADASW--RRQTLILNNLANDDTPGYKRKDI-EFGSVLKKELM--ETHERTLDRAVNVL 69
Query: 66 DSSGLHWNAH 75
D +G H + +
Sbjct: 70 DDNGNHVDGY 79
>gi|297584032|ref|YP_003699812.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
MLS10]
gi|297142489|gb|ADH99246.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
MLS10]
Length = 134
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---------QNFLMARTH 58
Q+ N + RQ +S+N+AN TPNY+AK +T+ N Q R
Sbjct: 10 QLLETSLNASARRQDTISDNVANVDTPNYKAK-----KTVFNHQLQRAMDDQRLRANRLD 64
Query: 59 ETHLK-----ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-L 112
+ H++ SD+ H+IE T +GN V I E+ + Y L
Sbjct: 65 DRHIEFGGPPRSDA------PHIIER---TNTQYNHNGNNVDIDKEMADMAENQIYYNAL 115
Query: 113 NTKLIKKLNSMVMHVVRG 130
++ + NS+ + RG
Sbjct: 116 IDRMNGRFNSVRTAMGRG 133
>gi|91794998|ref|YP_564649.1| flagellar basal body rod protein FlgB [Shewanella denitrificans
OS217]
gi|91717000|gb|ABE56926.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans
OS217]
Length = 116
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQ 50
++ ER KI++ N+ NA TP Y+AKD+ F ++ Q
Sbjct: 17 DFRVERSKILAGNLVNAETPGYQAKDL-DFSVLMAQ 51
>gi|94312666|ref|YP_585875.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|93356518|gb|ABF10606.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|222834412|gb|EEE72889.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
F+ + ++RQ +++ NIA+A TP Y+A+D F + L Q+
Sbjct: 8 FRFQQDALSLRTQRQSVIASNIAHADTPGYKARDF-DFASTLAQS 51
>gi|170748127|ref|YP_001754387.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654649|gb|ACB23704.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
Length = 246
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMAR 56
MQ + +++Q A L +R V+ N+AN T YRA+++ FETIL+Q + A
Sbjct: 1 MQSSLYVTLSAQMA--LEQRLNTVAANVANLGTVGYRAEEV-KFETILSQAGHRDVAFAT 57
Query: 57 THETHL 62
ET L
Sbjct: 58 PGETFL 63
>gi|326318077|ref|YP_004235749.1| putative phosphate transport regulator [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374913|gb|ADX47182.1| putative phosphate transport regulator [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 215
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAK---DISSFETILNQ-NFLMART-HET 60
FF++ +QHA+ + E + S+ +AN + P+ R K D+ + E ++ + RT H+T
Sbjct: 13 FFEMFNQHADRIVEAARAFSQLVANYNDPHLRDKYNQDVDNAERAADRVTHEVNRTLHKT 72
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D +H +I D +Q S T+ + + + + I L +L+ K ++L
Sbjct: 73 FITPIDREQIHS---LINTMDDVADLIQDSAETMALYDVRHMTEEITRLTDLSLKCCERL 129
Query: 121 NSMV 124
V
Sbjct: 130 RDAV 133
>gi|238927421|ref|ZP_04659181.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
gi|238884703|gb|EEQ48341.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
Length = 139
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--------LMAR 56
+ ++S+ + + R +++S NIAN +TP +R + FE +L + + R
Sbjct: 9 SVIDVSSRALSAANLRHEVLSNNIANVNTPYFRRSHV-RFEDLLRKELGLEDDPLMKLVR 67
Query: 57 THETHLKESDSSGLHWNAHV-IEAPLDQTTGVQVSGNTVGITNEL 100
TH+ HL H H IE + TT +++ GN V I E+
Sbjct: 68 THDRHL----PIPYHGKTHAFIEQ--ESTTNMRLDGNNVDIDIEM 106
>gi|260767920|ref|ZP_05876854.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP
102972]
gi|260615950|gb|EEX41135.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP
102972]
gi|315179623|gb|ADT86537.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
Length = 120
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
N+ +R K+++ N+AN TP Y AKD+ +F+T++
Sbjct: 17 NFRVQRTKVLASNLANVDTPGYLAKDL-TFKTVM 49
>gi|289523577|ref|ZP_06440431.1| flagellar basal-body rod protein FlgB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503269|gb|EFD24433.1| flagellar basal-body rod protein FlgB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 135
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHETHLK--ESD 66
LS+R + +S+N+AN +TP Y A+ +FE L + +A THE H+ D
Sbjct: 16 LSKRFEAISQNVANTNTPGY-ARSEVTFEDELREALSVSKRPKLPLATTHEAHITNLPRD 74
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
G+ H + L + GN V + E+ K + Y L+ K
Sbjct: 75 IKGITPKEHRVVGEL-----ARWDGNGVDLDIEMSKLAQARMTYTALASLMSK 122
>gi|323498423|ref|ZP_08103419.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM
21326]
gi|323316496|gb|EGA69511.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM
21326]
Length = 131
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 12 QHANWLSERQ-KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
QH L ER +++S NIA A+TP Y++K + Q L A T E + S + G
Sbjct: 13 QHTVGLRERNAEVISTNIAQANTPGYKSKGMDF------QKALQAATSEASIGLSRTDGR 66
Query: 71 HWNAH-------VIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELN 113
H A + P TG GNTV + E L+ I++ L+
Sbjct: 67 HIPASTRVTGEVMYRLPSQPDTG---DGNTVDVDLERNLFMQNQIRHQASLD 115
>gi|261253617|ref|ZP_05946190.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP
102891]
gi|260937008|gb|EEX92997.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP
102891]
Length = 131
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 12 QHANWLSERQ-KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
QH + ER +++S NIA A+TP Y+AK + Q L A T E + S + G
Sbjct: 13 QHTVGVRERNAEVMSTNIAQANTPGYKAKGMDF------QKALQAATSEASIGLSRTDGR 66
Query: 71 HWNAH-------VIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELN 113
H A + P TG GNTV + E L+ I++ L+
Sbjct: 67 HIAASTQVTGEVMYRLPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLD 115
>gi|300870978|ref|YP_003785849.1| flagellar basal body rod protein FlgB [Brachyspira pilosicoli
95/1000]
gi|300688677|gb|ADK31348.1| flagellar basal body rod protein, FlgB [Brachyspira pilosicoli
95/1000]
Length = 142
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + N R +++++NIAN STPN++ D+ +FE L + + K +D
Sbjct: 15 IAKKLLNVYGLRAEVIADNIANVSTPNFKRSDV-TFEYQLARALDSEKYDGIEAKRTDPR 73
Query: 69 GLHWNAHVIEAP------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+N + + +D T + N V I E+ + Y++ ++++
Sbjct: 74 HFPFNMPMDYSEVSPTITVDYDTNYRNDKNNVDIDKEMAEEAKNTLRYQMFSQIV 128
>gi|238796901|ref|ZP_04640405.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
gi|238719161|gb|EEQ10973.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
Length = 137
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETIL----------NQNFLMARTHETHLKES 65
L++RQ I++ NIAN TP Y A+D+ F L N +A T TH+
Sbjct: 18 LLTQRQDILASNIANVDTPGYLARDM-DFSQQLKNAVDRSAPDNAPLTLALTSGTHIAGV 76
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL--YKSGHIKY 108
+ ++ N + P DQ + GNTV + E + +KY
Sbjct: 77 -APAINSNQLLYRIP-DQPSA---DGNTVDMDRERVSFADNSMKY 116
>gi|225619784|ref|YP_002721041.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae
WA1]
gi|225214603|gb|ACN83337.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae
WA1]
Length = 142
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+A + N R +++++NIAN STPN++ D+ +FE L + + K +DS
Sbjct: 15 VAKKLLNVYGLRAEVIADNIANVSTPNFKRSDV-TFEYQLARALDSENYNGMEAKRTDSR 73
Query: 69 GLHWNAHVIE-----AP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ H+ +P +D T + N V I E+ + Y++ T+++
Sbjct: 74 --HFPFHMPMDYKQVSPTITVDYDTSYRNDKNNVDIDKEMAEEAKNTLRYQMFTQIV 128
>gi|226327749|ref|ZP_03803267.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
gi|225203453|gb|EEG85807.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
Length = 136
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+RQ+I++ NIANA TP ++A+DI F + L + RT
Sbjct: 21 KRQEILAANIANADTPGFQARDI-DFASELKKTIENGRT 58
>gi|298345987|ref|YP_003718674.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
gi|304390255|ref|ZP_07372209.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315654574|ref|ZP_07907480.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333]
gi|315657520|ref|ZP_07910402.1| flagella basal body rod protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236048|gb|ADI67180.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
gi|304326737|gb|EFL93981.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315491038|gb|EFU80657.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333]
gi|315491992|gb|EFU81601.1| flagella basal body rod protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 115
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
+ LS RQ+++++NIAN TP + A + SFE L + TH+ + S
Sbjct: 15 DGLSMRQRVIADNIANIQTPGFLAGKV-SFENELARAVQFGHPATTHIATARS------- 66
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
L+ T ++ GN V + E S ++L T+ I
Sbjct: 67 ------LEPT---RIDGNNVNLDTETISSVDTVLRFQLATQAI 100
>gi|59712484|ref|YP_205260.1| flagellar basal body rod protein FlgB [Vibrio fischeri ES114]
gi|24459274|gb|AAL86627.1| FlgB [Vibrio fischeri ES114]
gi|59480585|gb|AAW86372.1| flagellar proximal rod protein FlgB [Vibrio fischeri ES114]
Length = 131
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ER ++++ NIA A+TP Y+AK + Q L + T + + S + G H NA
Sbjct: 20 AERAEMLATNIAQANTPGYKAKGMDF------QKALQSATSKASMGLSRTDGRHINASTR 73
Query: 78 EA-------PLDQTTGVQVSGNTVGITNE 99
A P TG GNTV + E
Sbjct: 74 MAGEIQYRLPTQPDTG---DGNTVDVDLE 99
>gi|224825774|ref|ZP_03698878.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
gi|224601998|gb|EEG08177.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
Length = 118
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 18 SERQKIVSENIANASTPNYRAKDIS 42
+ER K+++ NIAN +TP Y+A+D+
Sbjct: 20 AERTKVLASNIANETTPGYQARDVD 44
>gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
2.4.1]
gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
KD131]
gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter
sphaeroides 2.4.1]
gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
KD131]
Length = 128
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R + VSENIANA TP Y K +S E + + + T L S+ ++ H
Sbjct: 23 RLRHVSENIANADTPGYHRKTVSFQE---DPDSGLVSTGPVRLDRSELQKIYAPGH---- 75
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
PL G G+ V + E+ + + YE N ++ + M ++
Sbjct: 76 PLAGEDGY-YDGSNVDLVVEIADAREAQRSYEANLRMFDQARQMTQSLL 123
>gi|56964037|ref|YP_175768.1| flagellar basal body rod protein FlgB [Bacillus clausii KSM-K16]
gi|56910280|dbj|BAD64807.1| flagellar basal-body rod protein FlgB [Bacillus clausii KSM-K16]
Length = 131
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHL 62
+ S +QK +S N+AN TPN++ K + SF+ +L + RT E HL
Sbjct: 16 YSSTKQKAISTNLANVDTPNFKEKTV-SFDQVLQAVGEKTGHLQAKRTDERHL 67
>gi|67538610|ref|XP_663079.1| hypothetical protein AN5475.2 [Aspergillus nidulans FGSC A4]
gi|40743445|gb|EAA62635.1| hypothetical protein AN5475.2 [Aspergillus nidulans FGSC A4]
gi|259485076|tpe|CBF81841.1| TPA: PKS-like enzyme, putative (JCVI) [Aspergillus nidulans FGSC
A4]
Length = 229
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/72 (18%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSEN----IANASTPNYRAKDISSFETILNQNFLMARTHET 60
+F+ ++ + W+ +Q+++ E + ++ T +Y+ KDI + + +++L + +
Sbjct: 47 SFWSMSGKEVEWMDPQQRLMLEGAYECLESSGTTSYKGKDIGCYIGVFGEDWLDIQAKVS 106
Query: 61 HLKESDSSGLHW 72
H + ++GL +
Sbjct: 107 HNSDGKTAGLSF 118
>gi|149927795|ref|ZP_01916046.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
gi|149823417|gb|EDM82648.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
Length = 150
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 25/129 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------------ 48
Q +++ + RQ++++ NI+N TPNY+A D F++ L
Sbjct: 9 MQFSAEALKLRARRQEVLTSNISNVDTPNYKAVDF-DFQSALKAATGEKGSMGSPSNPGL 67
Query: 49 -NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE--LYKSGH 105
N +A TH+ H+ ++G+ A +++ + + GN+V I E +
Sbjct: 68 GNGAGALAVTHQGHITGKGNAGMST-AEMLQ--FRRGNNAAIDGNSVDIDRERAAFAENT 124
Query: 106 IKYLYELNT 114
+KY L +
Sbjct: 125 VKYEAALRS 133
>gi|32474823|ref|NP_867817.1| flagellar basal-body rod protein FlgB [Rhodopirellula baltica SH 1]
gi|32445363|emb|CAD75364.1| probable flagellar basal-body rod protein FlgB [Rhodopirellula
baltica SH 1]
Length = 188
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFL---MARTHETHLKESDSSGL 70
+ R ++++ NIAN STP+YR++D+ F+T L ++ + + + D S
Sbjct: 21 FTERRHELLAGNIANLSTPDYRSRDLDQGQFQTALAESIRDRGKGPSPAPEIAQPDLSQG 80
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITN 98
H + V + P G + G TVG+ N
Sbjct: 81 HIPSWVHD-PF----GTAIRGGTVGMPN 103
>gi|327539963|gb|EGF26562.1| flagellar basal-body rod protein FlgB [Rhodopirellula baltica WH47]
Length = 186
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 16 WLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFL---MARTHETHLKESDSSGL 70
+ R ++++ NIAN STP+YR++D+ F+T L ++ + + + D S
Sbjct: 19 FTERRHELLAGNIANLSTPDYRSRDLDQGQFQTALAESIRDRGKGPSPAPEIAQPDLSQG 78
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITN 98
H + V + P G + G TVG+ N
Sbjct: 79 HIPSWVHD-PF----GTAIRGGTVGMPN 101
>gi|119947180|ref|YP_944860.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii
37]
gi|119865784|gb|ABM05261.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii
37]
Length = 117
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 26/34 (76%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
I +Q + ++R +I++ N+AN+ TPNY+A+D++
Sbjct: 11 IHTQLLQFHTQRTQILANNLANSDTPNYKAQDLT 44
>gi|15606428|ref|NP_213808.1| flagellar basal body rod protein FlgB [Aquifex aeolicus VF5]
gi|6225341|sp|O67244|FLGB_AQUAE RecName: Full=Flagellar basal-body rod protein flgB
gi|2983626|gb|AAC07194.1| flagellar basal body rod protein FlgB [Aquifex aeolicus VF5]
Length = 124
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
+ ++ N+ +R K++ N+ANA TPNY+ +D+ F
Sbjct: 9 LYKKYINFTWKRHKVLLGNLANADTPNYKRRDLIFF 44
>gi|255523707|ref|ZP_05390673.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
gi|296186711|ref|ZP_06855113.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
gi|255512576|gb|EET88850.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
gi|296048748|gb|EFG88180.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
Length = 133
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNF---LMARTHETHLKESDSSGLHWNA 74
+ER K ++NIAN +T Y+ K + +FE L N + T + H+K L N
Sbjct: 24 TERSKATADNIANINTKGYKRKYV-TFEETLQSNMDDLDLKTTDDKHIK------LQENY 76
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNE 99
I D +T + GN V I NE
Sbjct: 77 GQINTKTDNSTSMNEDGNNVDIENE 101
>gi|42526721|ref|NP_971819.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC
35405]
gi|41817036|gb|AAS11730.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC
35405]
gi|325473783|gb|EGC76971.1| FlgB protein [Treponema denticola F0402]
Length = 139
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ----------NFLMARTHETHLKESDS 67
S R + S N+AN+ PN++ ++ +FE+ L + F +A TH H+K ++
Sbjct: 21 SLRYTVTSNNLANSDVPNFKRTEV-NFESELKRAFDSEKNAKGAFQLATTHPLHIKSNEP 79
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + LD T + +GN V +E K I+ Y+L
Sbjct: 80 --IDYKTVEPVRVLDYLTAEKANGNNVNPEDEAMKVLKIQMQYQL 122
>gi|304404241|ref|ZP_07385903.1| flagellar basal-body rod protein FlgB [Paenibacillus
curdlanolyticus YK9]
gi|304347219|gb|EFM13051.1| flagellar basal-body rod protein FlgB [Paenibacillus
curdlanolyticus YK9]
Length = 136
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
RQK++S+NIAN TPN++ ++ FE L+A T+ E +G+ NA I
Sbjct: 22 RQKVISDNIANVDTPNFKRSEV-LFED------LLADAMGTN--EKKIAGIRTNARHI-- 70
Query: 80 PLDQTTGV 87
P+ Q++ +
Sbjct: 71 PIGQSSSI 78
>gi|257091582|ref|YP_003165225.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048591|gb|ACV37778.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 119
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
RQ++++ NIANA TP Y+A DI +N+ + + L + ++ H +
Sbjct: 8 RQQLLASNIANADTPGYKAVDID-----INEAARVVTSTAASLSLATTANGHLSGGTQAP 62
Query: 80 PLDQTTGV----QVSGNTVGITNELYK---------------SGHIKYLYEL 112
P V GNTV + E K SGH K+L EL
Sbjct: 63 PFPLKFHVPYQAAADGNTVEMDVERQKFSENSLMYQFSLDRVSGHFKHLMEL 114
>gi|218778519|ref|YP_002429837.1| flagellar basal-body rod protein FlgB [Desulfatibacillum
alkenivorans AK-01]
gi|218759903|gb|ACL02369.1| Flagellar basal-body rod protein FlgB [Desulfatibacillum
alkenivorans AK-01]
Length = 127
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+RQ ++S N+AN TP+Y AKD+ E++ Q + ++RTH H
Sbjct: 23 KRQGLISGNLANIETPDYHAKDLDFRESL--QKAMQGGSKDLSRTHSKH 69
>gi|89092133|ref|ZP_01165088.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
gi|89083868|gb|EAR63085.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
Length = 131
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART------HETHLKESDSSGLH 71
+ R ++++ NIANA TPN++A+D+ + + + + + H+T L E D
Sbjct: 20 ARRAEVLANNIANADTPNFKARDMEFAHALEHASQMQVKQTATSSGHKTQLLEPD----- 74
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
A ++ +Q + V GNTV + E+ + Y+ + + + K + + ++G
Sbjct: 75 LAADMMYRIPNQAS---VDGNTVELQQEMARYTENALDYQTSFQFLNKKFTGLKSAIKG 130
>gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
17029]
gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
WS8N]
gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter
sphaeroides ATCC 17029]
gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
WS8N]
Length = 126
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R + VSENIANA TP Y K +S E + + + T L S+ ++ H
Sbjct: 21 RLRHVSENIANADTPGYHRKTVSFQE---DPDSGLVSTGPVRLDRSELQKIYAPGH---- 73
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
PL G G+ V + E+ + + YE N ++ + M ++
Sbjct: 74 PLAGEDGY-YDGSNVDLVVEVADAREAQRSYEANLRMFDQARQMTQSLL 121
>gi|198463876|ref|XP_002135603.1| GA28217 [Drosophila pseudoobscura pseudoobscura]
gi|198151449|gb|EDY74230.1| GA28217 [Drosophila pseudoobscura pseudoobscura]
Length = 1112
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
QHA W+ +RQ + I N P Y ++ + ET LN ++ E L+ S S+
Sbjct: 86 QHALWMQQRQLQLPAWIENTLLPTYCPEERAKLETCLNSVYMWNCLEEQRLQLSQSN 142
>gi|30248319|ref|NP_840389.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
gi|30138205|emb|CAD84213.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
Length = 137
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMARTHETHLKESDSSGLHW 72
RQ+++S NIANA TP ++A+D + + N Q+ +A T H+ +D +
Sbjct: 22 RQELLSGNIANADTPGFKARDFDFAKAMQNVQSPQRVQHSSLATTAPGHIGMADFRSITS 81
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNE 99
P + + GNTV + E
Sbjct: 82 VPKQYRVPQQPS----IDGNTVDMDTE 104
>gi|163788622|ref|ZP_02183067.1| outer membrane protein [Flavobacteriales bacterium ALC-1]
gi|159875859|gb|EDP69918.1| outer membrane protein [Flavobacteriales bacterium ALC-1]
Length = 791
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 59 ETHLKESDSSGLHWNAHV--------IEAPLDQTTGVQVSGNTVGITN---ELYKSGHIK 107
+ + KE +SSG H N + E P+ + G + G + L+ +I
Sbjct: 227 DIYQKEGNSSGFHMNGGIGLISSRLLAEGPIKKNKGSFLFGGRSSYAHLFLPLFDLDNIA 286
Query: 108 YLYELNTKLIKKLN 121
Y Y+LNTKL +LN
Sbjct: 287 YFYDLNTKLSYRLN 300
>gi|303326603|ref|ZP_07357045.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3]
gi|302862591|gb|EFL85523.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3]
Length = 137
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHLKES---DSSGL 70
+RQ +++ N+AN TPNY+ ++++ + + L+ M+ T E H+ + D+ G
Sbjct: 21 QRQNVITSNLANVETPNYKPRELAFEKELQSALGLDMKGRMSATSEGHMPAAFNPDNFGP 80
Query: 71 HWNAHVIEAPLDQTTGVQVSG-NTVGITNELYKSGHIKYLYELNTKLIKK 119
W+ Q Q+ G + V + E+ K + Y T+++ K
Sbjct: 81 EWSK--------QFKPRQIHGEDRVSLDKEMAKHAKNQLQYTALTQIMSK 122
>gi|209695765|ref|YP_002263695.1| flagellar basal body rod protein FlgB [Aliivibrio salmonicida
LFI1238]
gi|208009718|emb|CAQ80022.1| flagellar basal-body rod protein FlgB [Aliivibrio salmonicida
LFI1238]
Length = 131
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S+R ++++ NIA A+TP Y+AK + Q + + T + + S + G H NA
Sbjct: 20 SQRAEMIATNIAQANTPGYKAKGMDF------QKAMQSATSKASMGLSRTDGRHINASTR 73
Query: 78 EA-------PLDQTTGVQVSGNTVGITNE 99
A P TG GNTV + E
Sbjct: 74 VAGEIQYRLPTQPDTG---DGNTVDVDLE 99
>gi|323495380|ref|ZP_08100457.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
gi|323310303|gb|EGA63490.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
Length = 131
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 12 QHANWLSERQ-KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
QH + ER +++S NIA A+TP Y++K + Q L A T E + S + G
Sbjct: 13 QHTVGVRERNAEVISTNIAQANTPGYKSKGMDF------QKALQAATSEASIGLSRTDGR 66
Query: 71 HWNAH-------VIEAPLDQTTGVQVSGNTVGITNE--LYKSGHIKYLYELN 113
H A + P TG GNTV + E L+ I++ L+
Sbjct: 67 HIPASTQVTGEVMYRLPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLD 115
>gi|39995515|ref|NP_951466.1| flagellar basal-body rod protein FlgB [Geobacter sulfurreducens
PCA]
gi|39982278|gb|AAR33739.1| flagellar basal-body rod protein FlgB [Geobacter sulfurreducens
PCA]
gi|298504515|gb|ADI83238.1| flagellar basal body rod protein FlgB [Geobacter sulfurreducens
KN400]
Length = 139
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
T + ++ + + ++S N+ANA TPNY K + SFE L N+ A TH
Sbjct: 9 TTINVLAKAVDLRARNHTMISANLANAETPNYTPKAL-SFEKELGAALKGNKTGSPATTH 67
Query: 59 ETH--LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
H LK +S VIE P T G +G V + E+ + + +Y + ++
Sbjct: 68 PRHIPLKGQAASVQSVEGTVIETPAP-TPGRDNNG--VELEAEMSRMAENQIMYNASIQI 124
Query: 117 IKKLNSMVMHVVRG 130
+ K + + ++G
Sbjct: 125 LTKKFEGMKYAIKG 138
>gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula
bermudensis HTCC2503]
gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula
bermudensis HTCC2503]
Length = 127
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+T +IA N S R + V+EN++N TP Y+ K + +F T N R L
Sbjct: 6 LTSLRIAGDGMNAQSFRMRTVNENLSNIDTPGYQRK-MLTFST---GNEQAVRVSRMILS 61
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ +H H PL G V + V + EL + K ++ N + ++ M
Sbjct: 62 SDEARKVHDPGH----PLADADGF-VEMSNVDMLTELSDAREAKRSFDANIEAFRQAREM 116
>gi|240145510|ref|ZP_04744111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
L1-82]
gi|257202325|gb|EEV00610.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
L1-82]
gi|291535999|emb|CBL09111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
M50/1]
gi|291538493|emb|CBL11604.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
XB6B4]
Length = 131
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
A+W+ R+ +++ NIAN TP Y+ +D+ FE++L
Sbjct: 18 DASWM--RENVITNNIANIDTPGYKRQDV-DFESVL 50
>gi|149191150|ref|ZP_01869408.1| flagellar basal body rod protein [Vibrio shilonii AK1]
gi|148834988|gb|EDL51967.1| flagellar basal body rod protein [Vibrio shilonii AK1]
Length = 115
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETIL 48
+R ++S NIAN TPNY+A D+ F+ +L
Sbjct: 20 DRAAVLSSNIANVDTPNYKAMDL-KFDAVL 48
>gi|116694216|ref|YP_728427.1| flagellar basal body rod protein FlgB [Ralstonia eutropha H16]
gi|113528715|emb|CAJ95062.1| flagellar basal body protein [Ralstonia eutropha H16]
Length = 135
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+RQ +++ NIA+A TP Y+A+D F + L Q+
Sbjct: 21 QRQSVIASNIAHADTPGYKARDF-DFSSTLAQS 52
>gi|167770223|ref|ZP_02442276.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM
17241]
gi|167667545|gb|EDS11675.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM
17241]
Length = 120
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N L+ Q I+ N+AN TP Y+AK + FE +L ++ D
Sbjct: 8 FQAMRSSLNGLAIEQNIILHNLANYETPGYKAKSV-KFEDVLKES-----------SRKD 55
Query: 67 SSGLH-WNAHVIEAPLDQTTGVQVSGNTV 94
SG + + A V E + T ++ GN V
Sbjct: 56 GSGRYDFKATVFEQ---EDTTMRPDGNNV 81
>gi|313634360|gb|EFS00957.1| flagellar basal-body rod protein FlgB [Listeria seeligeri FSL
N1-067]
Length = 133
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHET---HLKESDSSGL 70
N+L ++VS NIANA+T N++A + +SFE L + + +ET L +++S
Sbjct: 13 NYLQTANQVVSNNIANANTSNFKASE-TSFEESLGSSLRPSGQNNETTTGSLTKTNS--- 68
Query: 71 HWNAHVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
H+ +DQT + GN V +T+E+ +Y L + NS
Sbjct: 69 ---KHLTGTEIDQTNAKVTNKGGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|289433988|ref|YP_003463860.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289170232|emb|CBH26772.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 133
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHET---HLKESDSSGL 70
N+L ++VS NIANA+T N++A + +SFE L + + +ET L +++S
Sbjct: 13 NYLQTANQVVSNNIANANTSNFKASE-TSFEESLGSSLRPSGQNNETTTGSLTKTNS--- 68
Query: 71 HWNAHVIEAPLDQTTG--------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
H+ +DQT + GN V +T+E+ +Y L + NS
Sbjct: 69 ---KHLTGTEIDQTNAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|238916743|ref|YP_002930260.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC
27750]
gi|238872103|gb|ACR71813.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC
27750]
Length = 130
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
++ A+W R+++++ NIAN TPNY+ +D+ F + L N L T +
Sbjct: 14 SAADASWT--REEVLTNNIANVDTPNYKRQDV-EFSSFL-ANALQRSGKSTSSLTQRVNN 69
Query: 70 LHWNAHVIEAPLDQTT-GVQVSGNTVGITNE 99
+++N I D +T + GN V ++ E
Sbjct: 70 VNYNDLSIRTYTDNSTLSYRTDGNNVDLSTE 100
>gi|229918624|ref|YP_002887270.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
gi|229470053|gb|ACQ71825.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
Length = 122
Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+Q+ Q N QK++S N++N TPN++AK + FE L R + SD
Sbjct: 8 YQLLKQAVNHAVLNQKVISHNLSNIDTPNFKAKQ-AVFEQTLQSEM---RLKLQGGRPSD 63
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVS-GNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
S+ + VI D+ G S GN V + E+ + + YE + + + +
Sbjct: 64 ST----QSKVI----DRAGGAMRSDGNNVDLDYEMSELARNQLQYEAMMEQLNRRLGGLK 115
Query: 126 HVVRG 130
V+RG
Sbjct: 116 SVIRG 120
>gi|188592114|ref|YP_001796712.1| flagellar basal body rod protein flgb [Cupriavidus taiwanensis
LMG 19424]
gi|170938488|emb|CAP63475.1| FlgB: Flagellar basal-body rod protein [Cupriavidus taiwanensis
LMG 19424]
Length = 135
Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQ 50
+RQ +++ NIA+A TP Y+A+D F + L Q
Sbjct: 21 QRQSVIASNIAHADTPGYKARDF-DFSSTLAQ 51
>gi|288573036|ref|ZP_06391393.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568777|gb|EFC90334.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 131
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHET 60
+++ + L+ R + V +N+ANA+TP Y +++ SFE L+ + MA T
Sbjct: 6 WKVMEKDLQGLAHRFRSVGQNLANANTPGYARREV-SFEDQLDDIVNGPKRLPMATTDPK 64
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S P DQ ++ N V E+ K K YE T+L+ K
Sbjct: 65 HMTTHARSVEEVTPREDRIP-DQL--YRLDRNNVDPEIEMAKLAETKMGYEAMTRLVSK 120
>gi|322421738|ref|YP_004200961.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18]
gi|320128125|gb|ADW15685.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18]
Length = 139
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 25/127 (19%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG-----LHW 72
++R ++S N+AN TP Y A DI SFE L ++ LKE SG H
Sbjct: 22 AKRHTMISANLANVETPGYTASDI-SFEGQL----------KSALKEGPKSGGVTHPRHI 70
Query: 73 NAHVIEAPLDQTTGVQV---------SGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
A L++ G V GN V + +E+ + + +Y + +++ K
Sbjct: 71 QLKGGAASLEKVQGDLVDLSSRSMGPDGNGVEMESEMGRLAENQIMYNASVQILAKKFEE 130
Query: 124 VMHVVRG 130
+ +RG
Sbjct: 131 LKQAIRG 137
>gi|328958287|ref|YP_004375673.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
gi|328674611|gb|AEB30657.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
Length = 142
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETHLK 63
F + + S RQ+++S NIAN +T +Y+ + FE+IL + M +T++ H+
Sbjct: 22 FNLMKNALDAASMRQEMISSNIANVNTADYKVNKV-EFESILENVSNGTAMNKTNDLHIG 80
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN-- 121
L+ V+ D T V+ +GN V I E+ + Y L+ +LN
Sbjct: 81 ---FGNLNEVTPVVSKRTD--TSVKENGNNVDIDIEMAEEASNSIYY---NSLVTQLNAK 132
Query: 122 -SMVMHVV 128
SM+ V+
Sbjct: 133 YSMLRSVI 140
>gi|219670132|ref|YP_002460567.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense
DCB-2]
gi|219540392|gb|ACL22131.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense
DCB-2]
Length = 133
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMARTHETHLKES--DSS 68
S R K+++ N+AN TP+++ D+ F+ +L + + T E HL+++ +SS
Sbjct: 21 SLRYKVLANNVANVDTPDFKRSDV-DFDLLLGEAMGQTGGELPLKVTSERHLQKTGFNSS 79
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
G V++ DQ T + GN V I E+
Sbjct: 80 G------VVQ---DQGTTYRNDGNNVDIDKEM 102
>gi|169827117|ref|YP_001697275.1| flagellar basal body rod protein FlgB [Lysinibacillus sphaericus
C3-41]
gi|168991605|gb|ACA39145.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus
C3-41]
Length = 130
Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
K ++ NIAN TPNY+AK++S E + Q + + T + D
Sbjct: 23 KTIANNIANVDTPNYKAKNVSFKEMLAEQKGIAISAYRTDNRHYD 67
>gi|226939377|ref|YP_002794450.1| FlgB [Laribacter hongkongensis HLHK9]
gi|226714303|gb|ACO73441.1| FlgB [Laribacter hongkongensis HLHK9]
Length = 154
Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 18 SERQKIVSENIANASTPNYRAKDI-------SSFETILNQNFLMARTHETHLKESDSSGL 70
+ R ++++ NIANA TPNY+A D S+ + +++T HL +
Sbjct: 37 ARRNEVIASNIANADTPNYKAVDFDFAKAMKSALAGDSRSSLALSQTDNRHLAGKQT--- 93
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+E Q + GNTV + E
Sbjct: 94 QQGTDGVEVEYRQAVQPSIDGNTVDMDVE 122
>gi|56130756|ref|YP_145659.1| putative flagellar basal-body rod protein [Ralstonia metallidurans
CH34]
gi|94152544|ref|YP_581951.1| flagellar basal body protein FlgB [Cupriavidus metallidurans CH34]
gi|56068746|emb|CAI11308.1| putative flagellar basal-body ROD protein [Cupriavidus
metallidurans CH34]
gi|93358914|gb|ABF13001.1| Flagellar basal body protein FlgB [Cupriavidus metallidurans CH34]
Length = 140
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 22 KIVSENIANASTPNYRAKDI---SSFETIL---NQNFLMARTHETHLKESDSSGLHWNAH 75
+ ++ NIANA TPNY+A+DI + E + N MA T HL+ S+ A
Sbjct: 29 EFLAANIANADTPNYKARDIDFGAELERAMASGNAFVGMATTSRRHLESRPSAA--EEAL 86
Query: 76 VIEAPLDQTTGVQVSGNTV 94
+ P+ + GNTV
Sbjct: 87 LYRVPMQSG----IDGNTV 101
Searching..................................................done
Results from round 2
>gi|254780381|ref|YP_003064794.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040058|gb|ACT56854.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
asiaticus str. psy62]
Length = 130
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET
Sbjct: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL
Sbjct: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
Query: 121 NSMVMHVVRG 130
NSMVMHVVRG
Sbjct: 121 NSMVMHVVRG 130
>gi|315121850|ref|YP_004062339.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495252|gb|ADR51851.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 183
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 97/130 (74%), Positives = 112/130 (86%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQPITFF+IASQHANWLSERQK+VSENIANASTP YR+KDIS+FET+LN N MARTHE
Sbjct: 54 MQPITFFEIASQHANWLSERQKVVSENIANASTPGYRSKDISAFETVLNDNIAMARTHEA 113
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HLK D G + + I+APL Q GVQVSGNTVGITNELYK+G+IK+LYELNT+L+KKL
Sbjct: 114 HLKAMDFDGFYRHVRTIQAPLYQPIGVQVSGNTVGITNELYKAGNIKHLYELNTRLVKKL 173
Query: 121 NSMVMHVVRG 130
N M+MHVV+G
Sbjct: 174 NYMMMHVVKG 183
>gi|209547925|ref|YP_002279842.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533681|gb|ACI53616.1| flagellar basal-body rod protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 130
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L+++ MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D S + V +A LDQ GVQ SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHLSGNDFSA-SGDIDVKDASLDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|86356309|ref|YP_468201.1| flagellar basal body rod protein FlgB [Rhizobium etli CFN 42]
gi|86280411|gb|ABC89474.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
Length = 130
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L+++ MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDRSDITMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +D S + V EA LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHFSGNDFSD-SGDIDVKEAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|222084862|ref|YP_002543391.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
gi|221722310|gb|ACM25466.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
Length = 130
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
MQPI F +AS+ A WL RQ++V+ NIANA+TP +RAKD++ F+ +L NQN MA+T+
Sbjct: 1 MQPIQLFDLASRQAEWLQTRQEVVAGNIANANTPKFRAKDVTPFQAVLDNQNVGMAKTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL ++ S + +V EA L+Q GVQ SGNTVG+ +EL KSG IK Y LNT L+
Sbjct: 61 AHLSGNEFSQ-SGDINVEEASLNQEIGVQESGNTVGLEDELAKSGEIKRQYSLNTALVSS 119
Query: 120 LNSMVMHVVR 129
+ M++ V+
Sbjct: 120 FHRMMLMTVK 129
>gi|190890360|ref|YP_001976902.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
gi|190695639|gb|ACE89724.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
Length = 130
Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L+++ MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHFSGNDFS-ETGDIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|327193033|gb|EGE59945.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
Length = 130
Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L+++ M RT+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMTRTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHFSGNDFS-ETGDIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|116250479|ref|YP_766317.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255127|emb|CAK06201.1| putative flagellar basal-body rod protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 130
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 65/130 (50%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L+ N MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDNSNINMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D S + V +A LDQ GVQ SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHLSGNDFSD-SGDIDVKDAALDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|241203103|ref|YP_002974199.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856993|gb|ACS54660.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 130
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/130 (49%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP + AKD++ F+ +L+ N MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFHAKDVTPFDAVLDNSNINMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D S + V +A LDQ GVQ SGNTVG+ EL KSG IK Y+LNT L+
Sbjct: 61 AHLSGNDFSD-SGDIDVKDAALDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 120 FNRMMLMTVR 129
>gi|325291942|ref|YP_004277806.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
gi|325059795|gb|ADY63486.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
Length = 130
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/129 (40%), Positives = 78/129 (60%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQPI F +AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ +T
Sbjct: 1 MQPIQLFDLASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMAKT 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H +S L N V + P++ G+Q SGN+V + E+ K+G IK Y+LN L+K
Sbjct: 61 HPAHFGASELSENIAVRDNPINNEIGMQESGNSVALAEEMTKTGEIKRQYDLNASLVKSF 120
Query: 121 NSMVMHVVR 129
+ M++ V+
Sbjct: 121 HRMMLMTVK 129
>gi|222147568|ref|YP_002548525.1| flagellar basal body rod protein FlgB [Agrobacterium vitis S4]
gi|221734556|gb|ACM35519.1| flagellar basal-body rod protein FlgB [Agrobacterium vitis S4]
Length = 130
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-QNFLMARTHE 59
M+PI F +AS+ A WLS RQ++++ NIANA+TP + AKDI+ F IL+ + F MART+
Sbjct: 1 MEPIKLFDVASRQAEWLSLRQEVIAGNIANANTPKFMAKDITPFNAILDVRQFGMARTNS 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ SD + + + EAPL+ GVQVSGN+V + +E+ K G I+ + LNT L+
Sbjct: 61 KHMASSDLN-TDLDVDIREAPLNGEIGVQVSGNSVALADEMTKMGEIQRQHSLNTNLVSS 119
Query: 120 LNSMVMHVVRG 130
N M++ V+G
Sbjct: 120 FNRMMLMTVKG 130
>gi|15964412|ref|NP_384765.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti 1021]
gi|307311554|ref|ZP_07591195.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
BL225C]
gi|307318909|ref|ZP_07598340.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
gi|3894106|emb|CAA11959.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
gi|15073589|emb|CAC45231.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
gi|306895323|gb|EFN26078.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
gi|306899571|gb|EFN30200.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
BL225C]
Length = 126
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M+PI F++AS+ A WL+ RQ +V+ NIANA+TP+YRAKD+ FE++L N MA TH
Sbjct: 1 MEPIQLFELASRQAQWLTVRQNVVAGNIANANTPHYRAKDVQPFESVLQNTGIQMAATHR 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ES + AHV E VQ SGNTV + EL K+G IK YELN L+K
Sbjct: 61 AHFTESPEA-----AHVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKS 115
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 116 FHRMILMTVR 125
>gi|227820855|ref|YP_002824825.1| flagellar basal body rod protein FlgB [Sinorhizobium fredii NGR234]
gi|227339854|gb|ACP24072.1| putative flagellar basal-body rod protein FlgB [Sinorhizobium
fredii NGR234]
Length = 126
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M PI F++AS+ A WL+ RQ +V+ NIANA+TP+YRAKD+ FE++L N MA TH
Sbjct: 1 MDPIQLFELASRQAQWLTVRQNVVAGNIANANTPHYRAKDVQPFESVLQNTGVQMAATHR 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ES + A V + + VQ SGNTV + E+ K+G IK YELN+ L+K
Sbjct: 61 AHFTESPDA-----AQVTDVGMIDDVAVQQSGNTVALEQEMMKTGEIKRDYELNSGLVKS 115
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 116 FHRMMLMTVR 125
>gi|159184364|ref|NP_353582.2| flagellar basal body rod protein FlgB [Agrobacterium tumefaciens
str. C58]
gi|159139678|gb|AAK86367.2| flagellar basal-body rod protein FlgB [Agrobacterium tumefaciens
str. C58]
Length = 130
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ Q MART
Sbjct: 1 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 60
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ HL ES S N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 61 NPAHLGESTLS---ENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 117
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 118 KSFHRMMLMTVK 129
>gi|239834445|ref|ZP_04682773.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
3301]
gi|239822508|gb|EEQ94077.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
3301]
Length = 126
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M PI F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ MA T
Sbjct: 1 MGPIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLE-----AEADGIAGARLRPDDITEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|2459711|gb|AAB71787.1| FlgB [Agrobacterium tumefaciens]
Length = 134
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ Q MART
Sbjct: 5 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ HL ES S N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 65 NPVHLGESTLS---ENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 121
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 122 KSFHRMMLMTVK 133
>gi|20141426|sp|Q44335|FLGB_AGRT5 RecName: Full=Flagellar basal-body rod protein flgB
Length = 134
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ Q MART
Sbjct: 5 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ HL ES S N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+
Sbjct: 65 NPAHLGESTLS---ENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLV 121
Query: 118 KKLNSMVMHVVR 129
K + M++ V+
Sbjct: 122 KSFHRMMLMTVK 133
>gi|114706768|ref|ZP_01439668.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
gi|114537716|gb|EAU40840.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
Length = 126
Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M + F + S+ A+WLS RQ +V+EN+AN +TP Y AKDI+ FE +L+ ++
Sbjct: 1 MDQVYLFSLTSKQADWLSHRQALVAENVANVNTPGYTAKDITPFEQVLDNTALAQTASNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL G A EA T V+ SGN+V + E+ K+G + Y LNT ++K
Sbjct: 61 KHLVG--FGGGTAEAEATEAV---TWDVKHSGNSVAVEQEMMKAGEVSRDYSLNTSIVKS 115
Query: 120 LNSMVMHVVRG 130
+ M M +RG
Sbjct: 116 FHRMFMTTIRG 126
>gi|90422607|ref|YP_530977.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisB18]
gi|90104621|gb|ABD86658.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisB18]
Length = 125
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-LMARTHE 59
M PI F +AS A WLS RQ +S N+ANA+TP Y+AKDI SF +L+ +A T
Sbjct: 1 MGPIYLFDVASSQAQWLSLRQATISSNVANANTPGYQAKDIESFSKLLDGKLIPVAVTSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + A+ E + + SGN+V + E+ K+G + Y LNT ++K
Sbjct: 61 MHIASGTA------ANPGETREKDSWDIVHSGNSVSLEQEMLKAGDVNRDYSLNTAIVKS 114
Query: 120 LNSMVMHVVRG 130
M M +G
Sbjct: 115 FQRMFMSSTKG 125
>gi|150395482|ref|YP_001325949.1| flagellar basal body rod protein FlgB [Sinorhizobium medicae
WSM419]
gi|150026997|gb|ABR59114.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
Length = 126
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M+PI F++AS+ A WLS RQ +V+ NIANA+TP+Y+A+D+ FE++L N MA TH
Sbjct: 1 MEPIQLFELASRQAQWLSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTGVQMAATHR 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ES + A V E VQ SGNTV + EL K+G IK YELN L+K
Sbjct: 61 AHFTESADA-----AQVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKS 115
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 116 FHRMILMTVR 125
>gi|115523176|ref|YP_780087.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisA53]
gi|115517123|gb|ABJ05107.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisA53]
Length = 134
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-QNFLMARTHE 59
+ P+ F +AS HA WLS RQ +S N+ANA+TP YRA+DI F IL+ + +A T+
Sbjct: 8 VGPVYLFDVASSHAQWLSLRQASISSNVANANTPGYRAQDIEPFAKILDAKVVPVAVTNP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + E + V SGN+V + E+ K+G I Y LNT ++K
Sbjct: 68 RHITTGSITSERAQGMRKE----DSWDVVHSGNSVSLEQEMLKAGDINRDYSLNTAIVKS 123
Query: 120 LNSMVMHVVR 129
+ M M +
Sbjct: 124 FHRMFMTSAK 133
>gi|328545508|ref|YP_004305617.1| flagellar basal-body rod protein B [polymorphum gilvum SL003B-26A1]
gi|326415249|gb|ADZ72312.1| Flagellar basal-body rod protein B [Polymorphum gilvum SL003B-26A1]
Length = 126
Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M+P+ ++ASQH +WLS RQ ++ENIAN+ TP + A+D+ F ++ +Q M TH
Sbjct: 1 MEPVYLTKLASQHNDWLSVRQATIAENIANSDTPGFAARDVVPFASVFDQTRLAMTATHG 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ G A E +T V SGN+V + EL K+G + + LNT L K
Sbjct: 61 AHM-----GGAAEQAEPAEVEKSETWQVTHSGNSVSLEQELMKAGEVARSHALNTSLAKS 115
Query: 120 LNSMVMHVVRG 130
+ M + V+G
Sbjct: 116 FHRMYLASVKG 126
>gi|153011527|ref|YP_001372741.1| flagellar basal body rod protein FlgB [Ochrobactrum anthropi ATCC
49188]
gi|151563415|gb|ABS16912.1| flagellar basal-body rod protein FlgB [Ochrobactrum anthropi ATCC
49188]
Length = 126
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ MA T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLESGADG-----ITGARLRPDDITEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|62317100|ref|YP_222953.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 1 str.
9-941]
gi|83269092|ref|YP_418383.1| flagellar basal body rod protein FlgB [Brucella melitensis biovar
Abortus 2308]
gi|189022365|ref|YP_001932106.1| flagellar basal body rod protein FlgB [Brucella abortus S19]
gi|237816662|ref|ZP_04595654.1| flagellar basal-body rod protein FlgB [Brucella abortus str. 2308
A]
gi|254691415|ref|ZP_05154669.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 6 str.
870]
gi|254695287|ref|ZP_05157115.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 3 str.
Tulya]
gi|254698385|ref|ZP_05160213.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 2 str.
86/8/59]
gi|254731830|ref|ZP_05190408.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 4 str.
292]
gi|256256601|ref|ZP_05462137.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 9 str.
C68]
gi|260544338|ref|ZP_05820159.1| flagellar basal-body rod protein FlgB [Brucella abortus NCTC 8038]
gi|260757029|ref|ZP_05869377.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 6 str.
870]
gi|260759599|ref|ZP_05871947.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 4 str.
292]
gi|260762843|ref|ZP_05875175.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 2 str.
86/8/59]
gi|260882839|ref|ZP_05894453.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 9 str.
C68]
gi|261215656|ref|ZP_05929937.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 3 str.
Tulya]
gi|297249957|ref|ZP_06933658.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 5 str.
B3196]
gi|62197293|gb|AAX75592.1| FlgB, flagellar basal-body rod protein [Brucella abortus bv. 1 str.
9-941]
gi|82939366|emb|CAJ12314.1| Flagellar basal-body rod protein FlgB [Brucella melitensis biovar
Abortus 2308]
gi|189020939|gb|ACD73660.1| Flagellar basal-body rod protein FlgB [Brucella abortus S19]
gi|237787475|gb|EEP61691.1| flagellar basal-body rod protein FlgB [Brucella abortus str. 2308
A]
gi|260097609|gb|EEW81483.1| flagellar basal-body rod protein FlgB [Brucella abortus NCTC 8038]
gi|260669917|gb|EEX56857.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 4 str.
292]
gi|260673264|gb|EEX60085.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 2 str.
86/8/59]
gi|260677137|gb|EEX63958.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 6 str.
870]
gi|260872367|gb|EEX79436.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 9 str.
C68]
gi|260917263|gb|EEX84124.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 3 str.
Tulya]
gi|297173826|gb|EFH33190.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 5 str.
B3196]
Length = 126
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA TP++RA+D+ F +L++ M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANADTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLE-----AEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|254720613|ref|ZP_05182424.1| flagellar basal body rod protein FlgB [Brucella sp. 83/13]
gi|265985653|ref|ZP_06098388.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
gi|306838575|ref|ZP_07471412.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
gi|306841052|ref|ZP_07473776.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
gi|264664245|gb|EEZ34506.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
gi|306288941|gb|EFM60241.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
gi|306406361|gb|EFM62603.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
Length = 126
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ MA T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLE-----AEADGIAATRLRPDDITEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|306846281|ref|ZP_07478842.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
gi|306273276|gb|EFM55145.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
Length = 126
Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ MA T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMAATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLEAEADG-----IAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|158422261|ref|YP_001523553.1| flagellar basal body rod protein FlgB [Azorhizobium caulinodans ORS
571]
gi|158329150|dbj|BAF86635.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
Length = 169
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
+ P+ F +AS+ A W S RQ ++ NIANA+TP Y+A+++ F ++N+ MA T
Sbjct: 43 LDPLYLFDLASRQARWASVRQATITGNIANANTPGYQAREVEPFSAVMNKTRLSMATTEP 102
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ A + + V SGN+V + E+ K+ + Y LNT +++
Sbjct: 103 GHMGV-----PFAGAETSKTKESDSWEVTASGNSVNLDQEMLKAADVNRTYTLNTNIVRA 157
Query: 120 LNSMVMHVVR 129
N M++ VR
Sbjct: 158 FNRMILTSVR 167
>gi|17989434|ref|NP_542067.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. 16M]
gi|23499913|ref|NP_699353.1| flagellar basal body rod protein FlgB [Brucella suis 1330]
gi|161620233|ref|YP_001594119.1| flagellar basal body rod protein FlgB [Brucella canis ATCC 23365]
gi|225628622|ref|ZP_03786656.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
gi|225686009|ref|YP_002733981.1| flagellar basal body rod protein FlgB [Brucella melitensis ATCC
23457]
gi|254702573|ref|ZP_05164401.1| flagellar basal body rod protein FlgB [Brucella suis bv. 3 str.
686]
gi|254706295|ref|ZP_05168123.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
M163/99/10]
gi|254711411|ref|ZP_05173222.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
B2/94]
gi|254712010|ref|ZP_05173821.1| flagellar basal body rod protein FlgB [Brucella ceti M644/93/1]
gi|254715079|ref|ZP_05176890.1| flagellar basal body rod protein FlgB [Brucella ceti M13/05/1]
gi|256014939|ref|YP_003104948.1| flagellar basal body rod protein [Brucella microti CCM 4915]
gi|256029959|ref|ZP_05443573.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
M292/94/1]
gi|256043070|ref|ZP_05446014.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. Rev.1]
gi|256059611|ref|ZP_05449809.1| flagellar basal body rod protein FlgB [Brucella neotomae 5K33]
gi|256111946|ref|ZP_05452897.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 3
str. Ether]
gi|256158121|ref|ZP_05456039.1| flagellar basal body rod protein FlgB [Brucella ceti M490/95/1]
gi|256252925|ref|ZP_05458461.1| flagellar basal body rod protein FlgB [Brucella ceti B1/94]
gi|256262868|ref|ZP_05465400.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
str. 63/9]
gi|260564300|ref|ZP_05834785.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. 16M]
gi|261216789|ref|ZP_05931070.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
gi|261220016|ref|ZP_05934297.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
gi|261313739|ref|ZP_05952936.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M163/99/10]
gi|261319019|ref|ZP_05958216.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
B2/94]
gi|261319656|ref|ZP_05958853.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
gi|261323580|ref|ZP_05962777.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
gi|261753153|ref|ZP_05996862.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
686]
gi|265986978|ref|ZP_06099535.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M292/94/1]
gi|265989508|ref|ZP_06102065.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
str. Rev.1]
gi|265993393|ref|ZP_06105950.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
str. Ether]
gi|265996638|ref|ZP_06109195.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
gi|294853172|ref|ZP_06793844.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
gi|17985311|gb|AAL54331.1| flagellar basal-body rod protein flgb [Brucella melitensis bv. 1
str. 16M]
gi|23463490|gb|AAN33358.1| flagellar basal-body rod protein FlgB [Brucella suis 1330]
gi|161337044|gb|ABX63348.1| flagellar basal-body rod protein FlgB [Brucella canis ATCC 23365]
gi|225616468|gb|EEH13516.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
gi|225642114|gb|ACO02027.1| flagellar basal-body rod protein FlgB [Brucella melitensis ATCC
23457]
gi|255997599|gb|ACU49286.1| flagellar basal body rod protein [Brucella microti CCM 4915]
gi|260151943|gb|EEW87036.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
str. 16M]
gi|260918600|gb|EEX85253.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
gi|260921878|gb|EEX88446.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
gi|261292346|gb|EEX95842.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
gi|261298242|gb|EEY01739.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
B2/94]
gi|261299560|gb|EEY03057.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
gi|261302765|gb|EEY06262.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M163/99/10]
gi|261742906|gb|EEY30832.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
686]
gi|262550935|gb|EEZ07096.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
gi|262764263|gb|EEZ10295.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
str. Ether]
gi|263000177|gb|EEZ12867.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
str. Rev.1]
gi|263092703|gb|EEZ16912.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
str. 63/9]
gi|264659175|gb|EEZ29436.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
M292/94/1]
gi|294818827|gb|EFG35827.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
gi|326410332|gb|ADZ67396.1| flagellar basal body rod protein FlgB [Brucella melitensis M28]
gi|326553624|gb|ADZ88263.1| flagellar basal body rod protein FlgB [Brucella melitensis M5-90]
Length = 126
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLE-----AEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|1086558|gb|AAB68965.1| FlgB [Agrobacterium tumefaciens]
Length = 134
Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats.
Identities = 52/129 (40%), Positives = 78/129 (60%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQPI F++AS+ A WLS RQ++V+ NIANA+TP + AKD+S FE ++ T
Sbjct: 5 MQPIQLFELASRQAEWLSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMART 64
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ S L N V + P++ G+Q SGN+VG+ E+ K+G IK Y+LN L+K
Sbjct: 65 NPAPPRESTLSENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSF 124
Query: 121 NSMVMHVVR 129
+ M++ V+
Sbjct: 125 HRMMLMTVK 133
>gi|254699458|ref|ZP_05161286.1| flagellar basal body rod protein FlgB [Brucella suis bv. 5 str.
513]
gi|261749909|ref|ZP_05993618.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
513]
gi|261739662|gb|EEY27588.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
513]
Length = 126
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLEAEADG-----IAATRLRSDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|163844343|ref|YP_001621998.1| flagellar basal body rod protein FlgB [Brucella suis ATCC 23445]
gi|163675066|gb|ABY39176.1| flagellar basal-body rod protein FlgB [Brucella suis ATCC 23445]
Length = 126
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LHLEAEADG-----IAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVR 129
+ M++ V +
Sbjct: 116 FHRMMLSVAK 125
>gi|13472573|ref|NP_104140.1| flagellar basal body rod protein FlgB [Mesorhizobium loti
MAFF303099]
gi|14023319|dbj|BAB49926.1| flagellar basal-body rod protein; FlgB [Mesorhizobium loti
MAFF303099]
Length = 126
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M+P++ F +A++ A WLS RQ ++ NIANA+TP Y A D+ FE +L++ + T
Sbjct: 1 MEPVSLFDLAAKQAQWLSVRQSAIAGNIANANTPGYTANDVEPFEKVLDRTAVSLQTTEA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + NA P + + S NTV + ++L K+G ++ +ELNT ++K
Sbjct: 61 GHLGSAAT-----NAGFTVKPQEDDGVIMPSKNTVVLEDQLLKAGEVRRSFELNTAIVKA 115
Query: 120 LNSMVMHVVR 129
+SM+M V+
Sbjct: 116 FHSMMMMAVK 125
>gi|148557912|ref|YP_001257210.1| flagellar basal body rod protein FlgB [Brucella ovis ATCC 25840]
gi|148369197|gb|ABQ62069.1| flagellar basal-body rod protein FlgB [Brucella ovis ATCC 25840]
Length = 126
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+L+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LYLE-----AEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|260568519|ref|ZP_05838988.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40]
gi|260155184|gb|EEW90265.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40]
Length = 126
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M I F +A++ A WLS RQ V+ N+ANA+TP++RA+D+ F +L++ M T
Sbjct: 1 MSSIHLFDLAARQAQWLSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQLTMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
L+ D T SGNTV + E+ K+G I Y LNT ++K
Sbjct: 61 LRLEAEADG-----IAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M++ V +G
Sbjct: 116 FHRMMLSVAKG 126
>gi|218460744|ref|ZP_03500835.1| flagellar basal body rod protein FlgB [Rhizobium etli Kim 5]
Length = 142
Score = 140 bits (352), Expect = 8e-32, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L+++ MART+
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDRSDIAMARTNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y+LNT L +
Sbjct: 61 AHLSGNDFSD-SGDIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLGQ 118
>gi|260466622|ref|ZP_05812810.1| flagellar basal body rod protein [Mesorhizobium opportunistum
WSM2075]
gi|259029628|gb|EEW30916.1| flagellar basal body rod protein [Mesorhizobium opportunistum
WSM2075]
Length = 126
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
M+P++ F +A++ A WL+ RQ ++ NIANA+TP Y A D+ FE +L++ + T
Sbjct: 1 MEPVSLFDLAAKQAQWLAVRQSAIAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + NA P + V S N+V + ++L K+G ++ +ELNT ++K
Sbjct: 61 GHLGSAAT-----NAGFAIKPQEDDGVVMPSKNSVVLEDQLLKAGEVRRSFELNTAIVKA 115
Query: 120 LNSMVMHVVR 129
+SM+M V+
Sbjct: 116 FHSMMMMAVK 125
>gi|319781684|ref|YP_004141160.1| flagellar basal body rod protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167572|gb|ADV11110.1| flagellar basal body rod protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 126
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
M+P++ F +A++ A WL+ RQ V+ NIANA+TP Y A D+ FE +L++ + T
Sbjct: 1 MEPVSLFDLAAKQAQWLAVRQSAVAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + NA P + V S N+V + ++L K+G ++ +ELNT ++K
Sbjct: 61 GHLGNAAT-----NAGFTIKPQEDDGVVMPSKNSVVLEDQLLKAGEVRRSFELNTAIVKA 115
Query: 120 LNSMVMHVVR 129
+SM+M V+
Sbjct: 116 FHSMMMMAVK 125
>gi|163850060|ref|YP_001638103.1| flagellar basal body rod protein FlgB [Methylobacterium extorquens
PA1]
gi|218528663|ref|YP_002419479.1| flagellar basal body rod protein FlgB [Methylobacterium
chloromethanicum CM4]
gi|240137194|ref|YP_002961663.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
AM1]
gi|254559206|ref|YP_003066301.1| flagellar basal-body rod protein flgB [Methylobacterium extorquens
DM4]
gi|163661665|gb|ABY29032.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
gi|218520966|gb|ACK81551.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
CM4]
gi|240007160|gb|ACS38386.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
AM1]
gi|254266484|emb|CAX22248.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
DM4]
Length = 129
Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHETHL 62
+ F +ASQHA +L+ RQ ++ N+ANA+TP Y+A+D+ F +L + MA T +HL
Sbjct: 5 VYLFDLASQHARFLATRQATIAGNVANANTPGYKARDVMPFAQVLARTGLDMASTATSHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ V EA +T V S + V + E+ K+G + + L+T ++K +
Sbjct: 65 GTQGTG-----IPVREAKPTETWEVLQSSSAVSLEQEMLKAGDVSRQHNLDTAVVKSFHR 119
Query: 123 MVMHVVRG 130
M+M V+G
Sbjct: 120 MLMAAVKG 127
>gi|118589984|ref|ZP_01547388.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
gi|118437481|gb|EAV44118.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
Length = 126
Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M+P+ ++ S +WLS RQ ++ENIANA+TP +R+KD+ F T++++ M TH+
Sbjct: 1 MEPVFLTKLVSNSNDWLSVRQATIAENIANANTPGFRSKDLEPFTTVISRTQLAMTATHD 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL ++ + + + V SGN+V + EL K+G + + LN + K
Sbjct: 61 GHLGQTMEAARKSDVE-----KADSWTVTHSGNSVSLEQELMKAGEVARDHSLNASIAKS 115
Query: 120 LNSMVMHVVR 129
+ M + V+
Sbjct: 116 FHRMYLSAVK 125
>gi|170741833|ref|YP_001770488.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
gi|168196107|gb|ACA18054.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
Length = 127
Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
M I F +AS+ A +LS RQ V+ NIANA TP Y+A+D+ F +L++ +A T +
Sbjct: 1 MSGIYLFGLASRRAQYLSVRQATVAGNIANADTPGYKARDVVPFAEVLSRAGLDLAATSQ 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ ++ + ++ G++V + E+ KS I + LNT ++K
Sbjct: 61 GHLRAGTTTP------TAKVKPSESWDAIQGGHSVSLEQEMLKSNDIARDFNLNTAVVKA 114
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 115 FHRMMLSGVR 124
>gi|319409190|emb|CBI82834.1| Flagellar basal-body rod protein flgB [Bartonella schoenbuchensis
R1]
Length = 128
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + F IA++ A+WL+ RQK ++ N+ANA+TP Y+A+D+ F T+L NQ MA T+
Sbjct: 1 MDSVNLFDIANKQADWLTVRQKAIASNVANANTPGYKARDVQDFPTVLQNQTISMAVTNV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +D +G+ A E ++ + SGN V + E+ K G + LNT ++K
Sbjct: 61 RHIDLTD-NGMEAQAIRSENIME----ITHSGNNVDLEEEMRKGGEVNREMSLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M+M V+G
Sbjct: 116 FHRMMMVTVKG 126
>gi|110632659|ref|YP_672867.1| flagellar basal body rod protein FlgB [Mesorhizobium sp. BNC1]
gi|110283643|gb|ABG61702.1| flagellar basal-body rod protein flgB [Chelativorans sp. BNC1]
Length = 135
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M+P+ F +A+Q A WLS RQ V+ NIAN +TP+Y+A D+ FE +L+ M TH
Sbjct: 11 MEPVNLFDLATQQARWLSVRQAAVAGNIANINTPSYKALDVEPFEKVLDGTRVAMQATHA 70
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + + + ++ E P + S N+V + +EL K+G ++ +ELNT ++K
Sbjct: 71 QH-QHTGVTPASFSLDESENPK-----MLPSENSVVLEDELVKAGEVRRAFELNTAIVKA 124
Query: 120 LNSMVMHVVRG 130
+ M++ +G
Sbjct: 125 FHRMILMTAKG 135
>gi|27381987|ref|NP_773516.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
USDA 110]
gi|27355157|dbj|BAC52141.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
110]
Length = 133
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
+ P+ F++AS A +L RQ ++ N+ANA+TP ++A+D+ F +L+ +A T
Sbjct: 8 VGPLYLFELASSQARYLELRQSTIATNVANANTPGFKARDVEPFNKVLDGMPVRLATTSP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
TH++ S + + V SGN+V + E+ K + Y +N+ +++
Sbjct: 68 THMQLSAT-----ETDTRATSKKDSWDVVHSGNSVSLEQEMIKGNDVNRDYSMNSAVVRS 122
Query: 120 LNSMVMHVVR 129
+ M++ V+
Sbjct: 123 FHRMLLSSVK 132
>gi|170748110|ref|YP_001754370.1| flagellar basal body rod protein FlgB [Methylobacterium
radiotolerans JCM 2831]
gi|170654632|gb|ACB23687.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
Length = 128
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
M PI F +AS+ L+ RQ ++S NIANA+TP YRA+D++ F +L++ L MA T
Sbjct: 1 MSPIFLFNLASRQLQHLTARQAVISGNIANANTPGYRARDLTPFRDVLDKTVLTMAATRP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ + A A V SGN+V I +L KSG + LN ++K
Sbjct: 61 GHLELDE-----PGARPARASASGGWDVVHSGNSVSIEEQLMKSGEVSRDQALNGSVVKA 115
Query: 120 LNSMVMHVVR 129
N M+ +
Sbjct: 116 FNRMLALSTK 125
>gi|300024609|ref|YP_003757220.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299526430|gb|ADJ24899.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 125
Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQP+ F +A + WL++RQ ++S+N+ANA+TP Y+A+D+ SFE + + MA T+
Sbjct: 1 MQPLQLFDLAFRQNEWLAQRQSVISQNVANANTPGYKARDVESFEDAMRKAVPMAVTNPD 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H S + +Q V VSGN V + E KSG + Y +NT++++
Sbjct: 61 HF----SPAGDGLVQARDNDPNQ-AEVLVSGNDVSLEQEFLKSGEVMRGYSMNTQIMRTF 115
Query: 121 NSMVMHVVRG 130
+ M+ V +G
Sbjct: 116 SGMLRSVTKG 125
>gi|217976222|ref|YP_002360369.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
gi|217501598|gb|ACK49007.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
Length = 126
Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
M I F ++SQ A WL+ RQ +++ N+ANA+TP + A D++ FE + N + +A T
Sbjct: 1 MGSIHLFDLSSQQARWLTVRQSVIAANVANANTPGFTASDVTPFEDVFNDASIRLAATDP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + + SGN+V + NE+ K+G + + LN+ ++K
Sbjct: 61 GHIGIDP-----LASDQVSVKDGAAWETTHSGNSVSLENEMMKAGEVNRSFSLNSSIVKS 115
Query: 120 LNSMVMHVVRG 130
N M+M V+G
Sbjct: 116 FNQMLMASVKG 126
>gi|121601960|ref|YP_989403.1| flagellar basal body rod protein FlgB [Bartonella bacilliformis
KC583]
gi|120614137|gb|ABM44738.1| flagellar basal-body rod protein FlgB [Bartonella bacilliformis
KC583]
Length = 128
Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M P+ F +AS+ A WLS RQK V+ N+ANA+TP Y+A+D+ +F I+ N+ M TH
Sbjct: 1 MDPVNLFDLASKQAEWLSVRQKAVASNVANANTPGYQARDVQNFTDIVQNKAISMKVTHV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ A VI D GV SGN V + E+ K I LNT ++K
Sbjct: 61 QHMDLTENG---MEAQVIR--PDNAGGVTHSGNNVNLEEEMSKGAAIGREMSLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMLTVRG 126
>gi|323139651|ref|ZP_08074693.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC
49242]
gi|322395083|gb|EFX97642.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC
49242]
Length = 126
Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M+P+ F + +WLS RQ +V++NIAN+ TP YRA+D+ F ++ + MA ++
Sbjct: 1 MEPVHLFNLIDHQRSWLSTRQSLVAQNIANSDTPGYRARDVMPFARVMESSALEMAGSNP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S S A+ SGN+V E+ K+G I+ Y L+T +++
Sbjct: 61 LHMHPSQS-----EAYAAATKPTDGWETTHSGNSVSPELEMIKAGEIRGAYTLDTNILRS 115
Query: 120 LNSMVMHVVR 129
++M + VR
Sbjct: 116 FHNMWLSAVR 125
>gi|319405398|emb|CBI79017.1| Flagellar basal-body rod protein flgB [Bartonella sp. AR 15-3]
Length = 128
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + FF++A++ ANWLS RQK ++ N+ANA+TP Y+A+D+ F IL N+ MA T+
Sbjct: 1 MDSVNFFEMANKQANWLSVRQKAIASNVANANTPGYKARDVEDFTAILQNKTISMAVTNI 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ HVI + V SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDITENG---METHVIR--PESIMEVTHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMATVRG 126
>gi|296447441|ref|ZP_06889366.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
OB3b]
gi|296255061|gb|EFH02163.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
OB3b]
Length = 127
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
++P+ F + + ++LS RQ +V++N+ANA++P YRA D++ F +L+Q M+ T+
Sbjct: 2 VEPVYLFDLVERQRSYLSARQALVAQNVANANSPGYRAVDLAPFTKVLDQSGLQMSETNS 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H++ + + A VSGN+V + E+ K+G I+ + ++T ++K
Sbjct: 62 LHVQSAAFDPQAASPKERTA-----WETTVSGNSVSLEQEMIKAGEIRGAFSIDTSILKA 116
Query: 120 LNSMVMHVVRG 130
+ M M ++G
Sbjct: 117 FHGMWMATLKG 127
>gi|90418394|ref|ZP_01226306.1| putative flagellar basal-body rod protein FlgB [Aurantimonas
manganoxydans SI85-9A1]
gi|90338066|gb|EAS51717.1| putative flagellar basal-body rod protein FlgB [Aurantimonas
manganoxydans SI85-9A1]
Length = 126
Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M + F +ASQ +L++RQ +V+EN+AN TP Y +KD+SSF L+ M+R+
Sbjct: 1 MDSLYIFGLASQRTAYLAQRQTVVAENVANVDTPGYTSKDLSSFTEALDATALRMSRSQA 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL DS+G + + V+ SGN+V + E+ K+G + Y L T ++K
Sbjct: 61 MHLASLDSAGGGSDV-----VNEMPWSVKHSGNSVSLPQEMLKAGEVSREYALGTSVVKS 115
Query: 120 LNSMVMHVVRG 130
+ M++ +G
Sbjct: 116 FHRMLIMSAKG 126
>gi|319403958|emb|CBI77546.1| Flagellar basal-body rod protein flgB [Bartonella rochalimae ATCC
BAA-1498]
Length = 128
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + FF++A++ ANWLS RQK ++ N+ANA+TP Y+A+D+ F +L N+ MA T+
Sbjct: 1 MDSVNFFEMANKQANWLSVRQKAIASNVANANTPGYKARDVEDFTAVLQNKTISMAVTNV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ + V SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDITENG-----METHIIRPENVMEVTHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMATVRG 126
>gi|163758012|ref|ZP_02165100.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
gi|162284301|gb|EDQ34584.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
Length = 125
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHE 59
MQPI F++ S+ A+WL+ RQ +V+ NIAN +TP Y A+++++FE ++ + MA TH
Sbjct: 1 MQPIQLFELTSKQAHWLTVRQSVVAGNIANVNTPGYTAREVAAFEAVMQETGTRMAATHP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H++E G + + V SGN+V + +EL K+G IK +YELN ++K
Sbjct: 61 GHIQEDPMRG------AVRSERQNGVEVMPSGNSVNLPDELSKTGEIKRMYELNAGMVKA 114
Query: 120 LNSMVMHVVR 129
+ M++ VR
Sbjct: 115 FHRMMLLTVR 124
>gi|319898634|ref|YP_004158727.1| flagellar basal-body rod protein flgB [Bartonella clarridgeiae 73]
gi|319402598|emb|CBI76143.1| Flagellar basal-body rod protein flgB [Bartonella clarridgeiae 73]
Length = 128
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
M + F++A++ A+WLS RQK ++ N+ANA+TP Y+A+D+ F +L N+ MA T+
Sbjct: 1 MDSVNLFEMANKQADWLSVRQKAIASNVANANTPGYKARDVDDFTAVLQNKTISMAVTNV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ AHV+ + T + SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDMTENG---MEAHVMR--PENITEITHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M + V+G
Sbjct: 116 FHRMTIAAVKG 126
>gi|188579864|ref|YP_001923309.1| flagellar basal body rod protein FlgB [Methylobacterium populi
BJ001]
gi|179343362|gb|ACB78774.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
Length = 129
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHETHL 62
+ F +ASQHA +L+ RQ ++ N+ANA+TP Y+A+D+ F +L + M+ T THL
Sbjct: 5 VYLFDLASQHARYLATRQATIAGNVANANTPGYKARDVVPFAQVLARTGLDMSSTANTHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ V E +T V S + V + E+ K+G + + L+T ++K +
Sbjct: 65 ATEGN-----RIPVRETKAAETWEVLQSSSAVSLEQEMLKAGDVSRQHNLDTAVVKSFHR 119
Query: 123 MVMHVVR 129
M+M V+
Sbjct: 120 MLMAAVK 126
>gi|319406973|emb|CBI80610.1| Flagellar basal-body rod protein flgB [Bartonella sp. 1-1C]
Length = 128
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-LMARTHE 59
M + FF++A++ ANWLS RQK ++ N+ANA+TP Y+A+D+ F +L MA T+
Sbjct: 1 MDSVNFFEMANKQANWLSVRQKAIASNVANANTPGYKARDVEDFTAVLQNKMISMAVTNI 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ +++ + V SGN V + E+ K G + LNT ++K
Sbjct: 61 HHMDITENG-----METHIIRPENVMEVTHSGNDVNLEEEMRKGGDVSREISLNTAIVKA 115
Query: 120 LNSMVMHVVRG 130
+ M M VRG
Sbjct: 116 FHRMTMATVRG 126
>gi|89068701|ref|ZP_01156087.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
gi|89045664|gb|EAR51726.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
Length = 131
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ ++FF+IASQ WL RQ++VSENIANA TP YRA+D+S FE+++ ++ + +
Sbjct: 3 LEAMSFFRIASQRMQWLGTRQQVVSENIANADTPGYRARDVSPFESMVTRSDAGSGPAVS 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ SG V E + T V + GNTV + + K+ I Y L +L +K
Sbjct: 63 NPAHITGSGRGAAVDVRED--EGTWNVSLDGNTVVLEEQSIKASEISENYRLAAQLYRKG 120
Query: 121 NSMV 124
++
Sbjct: 121 YELL 124
>gi|182680551|ref|YP_001834697.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636434|gb|ACB97208.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 126
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
M P+T + SQ A WL+ RQ +++NIA A+TP +++ D+ FE + ++ M T
Sbjct: 1 MGPVTVLDLVSQQARWLTLRQATIAQNIAQANTPGFKSVDLLPFEQVYSESGLRMTATSP 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL +D + A EA SGN+V + EL K+G I Y LNT + +
Sbjct: 61 KHLA-ADPNEADLTAGHTEAG----WETTHSGNSVSLEQELMKTGEIHGAYTLNTNIARS 115
Query: 120 LNSMVMHVVR 129
M++ V+
Sbjct: 116 FQQMLLTAVK 125
>gi|114765224|ref|ZP_01444356.1| Flagellar basal-body rod protein FlgB [Pelagibaca bermudensis
HTCC2601]
gi|114542359|gb|EAU45387.1| Flagellar basal-body rod protein FlgB [Roseovarius sp. HTCC2601]
Length = 133
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ ++FFQ+ASQ WL RQ ++SEN+ANA TP+Y+AK +S F+ +L M T
Sbjct: 3 LGGMSFFQLASQRMTWLGARQAVISENVANADTPDYKAKKVSGFDAMLENADAMQGLKVT 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ SSG N + A + + GNTV + + + + Y L +L ++
Sbjct: 63 DTRHITSSGETPNGVRVTA-DEDAWEGSIDGNTVALEQQTIDAAEVAGSYRLAAELYRRG 121
Query: 121 NSMVMHVVRG 130
+S++ V G
Sbjct: 122 HSLLTIAVTG 131
>gi|84502400|ref|ZP_01000536.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
HTCC2597]
gi|84389212|gb|EAQ02009.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
HTCC2597]
Length = 133
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHE 59
+ ++FF +AS+ NWL RQ+++++N+AN+ TP Y+A+D+S+F +L RT +
Sbjct: 3 LTDMSFFDLASRRMNWLGARQQVIAQNVANSDTPGYKARDVSNFAEVLRGAGGAGVRTTD 62
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ G ++ E + V + GN+V + + K+ I Y L +L +K
Sbjct: 63 SRHIGGVGGGAIDGVNIRED--EGAHEVSLDGNSVALEQQSIKAAEISENYRLAAQLYRK 120
Query: 120 LNSMVMHVVRG 130
+ M+ V G
Sbjct: 121 GHEMLTLAVTG 131
>gi|260431753|ref|ZP_05785724.1| flagellar basal body rod protein FlgB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415581|gb|EEX08840.1| flagellar basal body rod protein FlgB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 129
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
+ F++A A +RQ ++S N+ANA TP YRA+DI FE L M T
Sbjct: 2 FSDLNVFKVAYAMATHAGQRQAVISRNMANADTPGYRARDIEPFEKALENRQSTQTMIAT 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL + S+G W V E V +GN V + E+ + +K ++ +
Sbjct: 62 RPGHLNAAGSNGHLWAEFVRE------GAVDPNGNGVSLETEMLNAVEVKRQHDRAVAIY 115
Query: 118 KKLNSMVMHVV 128
K ++ +
Sbjct: 116 KSSLGILRTSL 126
>gi|288962706|ref|YP_003453000.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288914972|dbj|BAI76456.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 130
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTH 58
+ I FFQ+A ++L++RQK+++EN+ NA+TP+Y+A+D+ SF+++++ + ART
Sbjct: 3 LSKIGFFQLAGTRLDYLAQRQKLIAENVVNANTPDYQARDLKSFDSLMDGIRPVEAARTS 62
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL S S+ A E SGN V + E+ K G + + L T L +
Sbjct: 63 GLHLASSRST-----AGFREEGKAALWESTPSGNAVSLEQEMIKGGETRDAFALTTSLFQ 117
Query: 119 KLNSMVMHVVR 129
+ M+ +
Sbjct: 118 RNVQMLRMAWK 128
>gi|288958047|ref|YP_003448388.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288910355|dbj|BAI71844.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 134
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE--TILNQNFLMA--R 56
+ + F++ S+ +WL++RQ+++S+NIANA TP Y+ +D+ F L+ N +
Sbjct: 3 LGNLGIFKLMSRKMDWLTQRQEVLSQNIANADTPEYKGRDLKPFSFRDALSDNRRLTPVA 62
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T HL + +G + P + GN V + +++ + Y+ T L
Sbjct: 63 TSAGHLAGTRGAGGMAQEQKVRDPYE----TAPDGNNVVLEDQMMRMSQSSMDYQTITNL 118
Query: 117 IKKLNSMVMHVVR 129
KK +M+ +R
Sbjct: 119 YKKQVAMIKSAIR 131
>gi|291617017|ref|YP_003519759.1| FlgB [Pantoea ananatis LMG 20103]
gi|291152047|gb|ADD76631.1| FlgB [Pantoea ananatis LMG 20103]
gi|327393468|dbj|BAK10890.1| flagellar basal-body rod protein FlgB [Pantoea ananatis AJ13355]
Length = 157
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++ N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + L
Sbjct: 29 LHFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASELNRAMANGRAEGSSLALKV 87
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A AP GNTV + E + Y+ + LI
Sbjct: 88 TSARHIEAQTNSAPSMDLLYRIPDQPSADGNTVDMDRERTQFADNSLKYQTDLTLISSQI 147
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 148 KGMMSVLQG 156
>gi|188534173|ref|YP_001907970.1| flagellar basal body rod protein FlgB [Erwinia tasmaniensis Et1/99]
gi|188029215|emb|CAO97087.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
Length = 137
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R T L +
Sbjct: 9 LRFNTEALNLRAQRQEILASNIANADTPGYQARDI-DFASQLSKAVENGRAQGTGLSLAV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A +++P + GNTV + E + Y+ + LI
Sbjct: 68 TSARHIPAETLQSPSIDLMYRIPAQPALDGNTVDMDRERTEFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMSVLQG 136
>gi|163738065|ref|ZP_02145481.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
BS107]
gi|163742539|ref|ZP_02149925.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
2.10]
gi|161384124|gb|EDQ08507.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
2.10]
gi|161388681|gb|EDQ13034.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
BS107]
Length = 138
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMART 57
+ + F+IA A +RQ +VS+NIANA TP Y AKDI F+ + Q M +
Sbjct: 11 FKELNVFKIAYSMATHAGKRQALVSQNIANADTPGYNAKDIKPFKEVYAQGPRAGDMIAS 70
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL + +G+ W G + NTV I E+ K +K ++ +
Sbjct: 71 RSNHLHGASGNGMDWAVTATR------GGGDPNDNTVSIETEILKGVEVKRQHDRALAIY 124
Query: 118 KKLNSMVMHVV 128
K +++ +
Sbjct: 125 KSSMNVLRSSL 135
>gi|23016628|ref|ZP_00056382.1| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 157
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
+ F++A +W+++RQ++++ NIANA+TP Y KD+ L+ ++A T E
Sbjct: 27 DDLGIFKMAKAQMDWIAQRQEVLAGNIANANTPRYLPKDLKD----LDFKQVLAGTTEPE 82
Query: 62 LKESDSSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + ++ H V +P +T GN V + ++ K G Y L
Sbjct: 83 VGAATTNAKHIVPEVTPSPFKAVTQRRTYESTPDGNAVILEEQMAKLGDANSKYNAAAAL 142
Query: 117 IKKLNSMVMHV 127
+K M+
Sbjct: 143 FQKYQKMIKTA 153
>gi|163794134|ref|ZP_02188107.1| Flagellar basal body protein [alpha proteobacterium BAL199]
gi|159180748|gb|EDP65267.1| Flagellar basal body protein [alpha proteobacterium BAL199]
Length = 132
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILN--QNFLMARTHE 59
+T F++A Q +WL +RQ ++++NIAN++TPNYR+K++ F++ L + M T++
Sbjct: 1 MTLFKMARQKMSWLGQRQTVLAQNIANSNTPNYRSKELQALDFDSALREHRPVQMQATNK 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + H V L V GN+V + +L K + Y+L + +K
Sbjct: 61 LHLSGTVAPKEHREEKVR---LKDVYEVNPDGNSVIMEEQLMKVSETQMQYQLAAGVYQK 117
Query: 120 LNSMVMHVV 128
M +
Sbjct: 118 NLKMFRLAL 126
>gi|295096228|emb|CBK85318.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 138
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + R T + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFSSELKKVMERGRAEGTGVSLAL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + GNTV + E + Y+ L+
Sbjct: 68 TSSRHIPAQAMTAPTTDLLYRIPDQPSLDGNTVDMDRERTQFADNSLQYQTGLTLLGGQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMTVLQG 136
>gi|269138579|ref|YP_003295279.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
gi|267984239|gb|ACY84068.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
gi|304558589|gb|ADM41253.1| Flagellar basal-body rod protein FlgB [Edwardsiella tarda FL6-60]
Length = 137
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + + S
Sbjct: 9 FRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSRVLEQGRPDGSGIALSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E + Y+ + ++
Sbjct: 68 TSSRHIPAQTLQPPSLDLLFRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDLTVLSGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMSVLQ 135
>gi|77464909|ref|YP_354413.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
2.4.1]
gi|77389327|gb|ABA80512.1| hypothetical protein RSP_1331 [Rhodobacter sphaeroides 2.4.1]
Length = 127
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + ++A A R ++V+ N+ANA TP YRA+D+ FE+ + + T
Sbjct: 2 FEKLVIVRMAQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVGLRTTRPG 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL+ +++S P++ +GNTV + +E+ ++ + +EL + +
Sbjct: 62 HLRSAEASATDP------VPVEGPGAASPNGNTVSLEDEMVRAVAARQQHELALAIYQSS 115
Query: 121 NSMVMHVV 128
+ ++ +
Sbjct: 116 SRLIRTSL 123
>gi|83309713|ref|YP_419977.1| flagellar basal body protein [Magnetospirillum magneticum AMB-1]
gi|82944554|dbj|BAE49418.1| Flagellar basal body protein [Magnetospirillum magneticum AMB-1]
Length = 133
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
+ F++A +W+++RQ++++ NIANA+TP Y KDI L+ ++A T +
Sbjct: 3 DDLGIFKMAKAQMDWIAQRQEVLASNIANANTPRYLPKDIKP----LDFKEVLAGTAQPD 58
Query: 62 LKESDSSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + ++ H V +P +T GN V + ++ K G Y L
Sbjct: 59 VGATTTNAKHIVPEVTPSPFKAVTQRRTFESTPDGNAVILEEQIAKVGDANSKYNAAAAL 118
Query: 117 IKKLNSMVMHV 127
+K M+
Sbjct: 119 FQKYQKMIKTA 129
>gi|209963544|ref|YP_002296459.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
gi|209957010|gb|ACI97646.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
Length = 131
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I F +AS+ ++L R ++++EN+ANA++P YRAKD+ F+ A +
Sbjct: 6 IGLFHLASRRMDYLGARHQVIAENVANANSPGYRAKDLKGFD--FQSAMQSAAVRPSLTD 63
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ +GL E + GN V + ++ K+ ++ Y+L L +K M
Sbjct: 64 PAHLAGLREARDFKEDRQAAAYEMAPDGNGVVLEEQMMKAAEVRQAYDLAAGLFQKHVGM 123
Query: 124 VMHVVRG 130
+ G
Sbjct: 124 LRQAFTG 130
>gi|154253012|ref|YP_001413836.1| flagellar basal-body rod protein FlgB [Parvibaculum lavamentivorans
DS-1]
gi|154156962|gb|ABS64179.1| flagellar basal-body rod protein FlgB [Parvibaculum lavamentivorans
DS-1]
Length = 142
Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQ---NFLMARTH 58
+ F + Q +WL+ RQ+++++N+AN+ TP Y AKD+ F ++ + + T
Sbjct: 6 LPIFDMMKQRLHWLTARQQVLAQNVANSDTPGYAAKDLKELDFGALVKRSGPSLTPVATQ 65
Query: 59 ETHLKESDSSG----LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
H+ S + + SGN+V + ++ K + Y+ T
Sbjct: 66 GGHIGSPVSGHGNFFRPGQSTGGQVVKKADFETSPSGNSVVLEEQMIKVAETQMDYQTVT 125
Query: 115 KLIKKLNSMVMHVV 128
L K ++ +
Sbjct: 126 GLYSKSLGLIRIAL 139
>gi|254420343|ref|ZP_05034067.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
gi|196186520|gb|EDX81496.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
Length = 135
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS---SFETILN--QNFLMARTH 58
I WL ERQ++++EN+ANA TP Y +D+ F L + RT+
Sbjct: 6 IPLLGQIKGRLGWLDERQRVIAENVANADTPGYGGRDLKQPTDFAAALRSGGGLQVVRTN 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ S+ + + + GN+V + ++ K + Y+ +
Sbjct: 66 RAHIAPPVSAPR------FDPTKSPDSETTLDGNSVVVEEQMLKMAESRMAYDAAIGFYQ 119
Query: 119 KLNSMVMHVVR 129
K SM+ R
Sbjct: 120 KSMSMLRMAAR 130
>gi|254503630|ref|ZP_05115781.1| hypothetical protein SADFL11_3669 [Labrenzia alexandrii DFL-11]
gi|222439701|gb|EEE46380.1| hypothetical protein SADFL11_3669 [Labrenzia alexandrii DFL-11]
Length = 177
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
M+P+ ++ SQ+ WLS RQ ++ENIANA+TP + AKD+ F +++++ M TH
Sbjct: 52 MEPVFLNKLVSQNNEWLSVRQAAIAENIANANTPGFGAKDVEPFVSVISKTHLAMTATHG 111
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+HL ++ + A + + V SGN+V + EL K+G + + LN + K
Sbjct: 112 SHLGQTMEA-----AKASDMEKADSWNVTHSGNSVSLEQELMKAGEVARDHSLNASIAKS 166
Query: 120 LNSMVMHVVR 129
+ M + VR
Sbjct: 167 FHKMYLAAVR 176
>gi|259417088|ref|ZP_05741007.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B]
gi|259345994|gb|EEW57808.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B]
Length = 138
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MART 57
+ + F IA A +RQ +VSENIANA TP Y AKDI F+ + M +
Sbjct: 11 FERLNVFNIAYSMATHAGKRQALVSENIANADTPGYLAKDIKPFKEVFAAGEAQGDMIAS 70
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+H+ ++ SG W + V +GN+V + ++ K ++ +
Sbjct: 71 RSSHINGANGSGFDWAVTT------DDSAVDPNGNSVSLEEQILNGIEAKRQHDRALAVY 124
Query: 118 KKLNSMVMHVV 128
+ +++ +
Sbjct: 125 RSSMNVLRASL 135
>gi|307131612|ref|YP_003883628.1| flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
gi|306529141|gb|ADM99071.1| Flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
Length = 139
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + S
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELNKVMEQGRASGQSVSLSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P T + GNTV + E Y+ + LI
Sbjct: 68 TSARHIPAQTVQPPELDLLYRVPTQPALDGNTVDMDRERTNFADNSLKYQSSLTLIGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|238785500|ref|ZP_04629483.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
gi|238713602|gb|EEQ05631.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
Length = 137
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVVEQGRVSGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + +I
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVISSQI 127
Query: 122 SMVMHVVR 129
++ V++
Sbjct: 128 KGMLSVLQ 135
>gi|238799104|ref|ZP_04642560.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
gi|238717051|gb|EEQ08911.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
Length = 137
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLQKVMEQGRASGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + +I
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVISSQI 127
Query: 122 SMVMHVVR 129
++ V++
Sbjct: 128 KGMLSVLQ 135
>gi|254477691|ref|ZP_05091077.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11]
gi|214031934|gb|EEB72769.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11]
Length = 129
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMART 57
+ + F+IA A +RQ +V++NIANA TP Y AKDI F+ + Q M +
Sbjct: 2 FKELNVFKIAYSMATHAGKRQALVAQNIANADTPGYNAKDIKPFKEVYEQRARPGDMIAS 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL + ++W A +Q G + N+V + E+ K +K ++ +
Sbjct: 62 RANHLNGGSGADMNW------AVTEQRGGGDPNDNSVSLEAEILKGVEVKRQHDRALAIY 115
Query: 118 KKLNSMVMHVV 128
K ++ +
Sbjct: 116 KSSMKVLRASL 126
>gi|197104390|ref|YP_002129767.1| probable flagellar basal-body rod protein [Phenylobacterium
zucineum HLK1]
gi|196477810|gb|ACG77338.1| probable flagellar basal-body rod protein [Phenylobacterium
zucineum HLK1]
Length = 139
Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETILNQNFLMARTH 58
+ I FQ+ + L+ERQK++++N+ANA TP Y +D+ F T L + MA T
Sbjct: 6 LAEIPLFQMLRGRLSHLTERQKVIAQNVANADTPGYVPQDVGPFGFRTRLQVSAAMAATQ 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H++ + +A +A ++ ++GN V + E+ K + Y+ +
Sbjct: 66 PGHMQPK--NARSPSAAAYKARETASSETTLNGNAVVLEEEMMKMAEARINYDAAIGYYQ 123
Query: 119 KLNSMVMHVVR 129
K ++ +
Sbjct: 124 KSLGILRLATK 134
>gi|56695105|ref|YP_165452.1| flagellar basal body rod protein FlgB [Ruegeria pomeroyi DSS-3]
gi|56676842|gb|AAV93508.1| flagellar basal-body rod protein; FlgB [Ruegeria pomeroyi DSS-3]
Length = 138
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMART 57
+ F++A A RQ ++++N+ANA TP YR +DI+ F + M +
Sbjct: 11 FSDLNVFKMAYAMATHAGTRQAVIAQNMANADTPGYRERDIAPFAETFARETAGTAMQAS 70
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+HL + +S W AP + + N V I ++ K+ +K ++ +
Sbjct: 71 RTSHLNGTAASAASW------APFETNAAGDPNRNNVSIEEQMLKAVEVKRQHDRALAIY 124
Query: 118 KKLNSMVM 125
K +M+
Sbjct: 125 KSSMNMLR 132
>gi|209964218|ref|YP_002297133.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
gi|209957684|gb|ACI98320.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
centenum SW]
Length = 135
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLM--AR 56
+ I F++ S+ W S+RQ ++++N+AN+ TP+Y+ +D+ F L ++ M A+
Sbjct: 3 LNKIGLFKLISEKMAWHSQRQGVLAQNVANSDTPDYKPQDLVAFDFRKELRESGRMEIAQ 62
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+ H+ + + A T GN V + ++ K G ++ T +
Sbjct: 63 TNPMHMAGTLPRDRPFKDGRQRA----TYETAPDGNAVVLEEQMTKLGQNAIEFQGVTNI 118
Query: 117 IKKLNSMVMHVV 128
+K +M+ +
Sbjct: 119 YRKQIAMLKTAL 130
>gi|238788312|ref|ZP_04632106.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
33641]
gi|238723558|gb|EEQ15204.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
33641]
Length = 137
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRVNGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPSLDGNTVDMDRERTNFADNSLKYQTDLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|220925381|ref|YP_002500683.1| flagellar basal body rod protein FlgB [Methylobacterium nodulans
ORS 2060]
gi|219949988|gb|ACL60380.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
2060]
Length = 134
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + W RQK+++EN+ANA+TP ++A+D+ + + +A + +
Sbjct: 6 LPLVSMLRNRMQWHQTRQKVLAENVANANTPGFKARDLR--APVFRPDGSLAASGPAGIV 63
Query: 64 ESDSSGLHWNAHVIEAPLDQ----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+S +H P ++ V SGN V + +E+ K+ + Y+L L +K
Sbjct: 64 VERTSPMHLAGTGATGPAEERERTRFDVVPSGNAVSLEDEMLKAADNQASYQLAASLYQK 123
Query: 120 LNSMVMHVV 128
++ V
Sbjct: 124 SLQLLRSAV 132
>gi|22126393|ref|NP_669816.1| flagellar basal body rod protein FlgB [Yersinia pestis KIM 10]
gi|45441412|ref|NP_992951.1| flagellar basal body rod protein FlgB [Yersinia pestis biovar
Microtus str. 91001]
gi|51596008|ref|YP_070199.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
IP 32953]
gi|108807170|ref|YP_651086.1| flagellar basal body rod protein FlgB [Yersinia pestis Antiqua]
gi|108812486|ref|YP_648253.1| flagellar basal body rod protein FlgB [Yersinia pestis Nepal516]
gi|145598613|ref|YP_001162689.1| flagellar basal body rod protein FlgB [Yersinia pestis Pestoides F]
gi|149366254|ref|ZP_01888289.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
gi|153947522|ref|YP_001401293.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
IP 31758]
gi|162419951|ref|YP_001606470.1| flagellar basal body rod protein FlgB [Yersinia pestis Angola]
gi|165925964|ref|ZP_02221796.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938769|ref|ZP_02227324.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010954|ref|ZP_02231852.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211185|ref|ZP_02237220.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401128|ref|ZP_02306631.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420101|ref|ZP_02311854.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425829|ref|ZP_02317582.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469717|ref|ZP_02334421.1| flagellar basal-body rod protein FlgB [Yersinia pestis FV-1]
gi|170024650|ref|YP_001721155.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
YPIII]
gi|186895111|ref|YP_001872223.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
PB1/+]
gi|218928919|ref|YP_002346794.1| flagellar basal body rod protein FlgB [Yersinia pestis CO92]
gi|229896239|ref|ZP_04511409.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A]
gi|229897174|ref|ZP_04512330.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229897900|ref|ZP_04513051.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902868|ref|ZP_04517985.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
gi|270486648|ref|ZP_06203722.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
gi|294504033|ref|YP_003568095.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|21959380|gb|AAM86067.1|AE013854_3 cell-proximal portion of basal-body rod protein [Yersinia pestis
KIM 10]
gi|45436273|gb|AAS61828.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Microtus str. 91001]
gi|51589290|emb|CAH20911.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
IP 32953]
gi|108776134|gb|ABG18653.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
gi|108779083|gb|ABG13141.1| flagellar basal-body rod protein FlgB [Yersinia pestis Antiqua]
gi|115347530|emb|CAL20439.1| flagellar basal-body rod protein FlgB [Yersinia pestis CO92]
gi|145210309|gb|ABP39716.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides F]
gi|149292667|gb|EDM42741.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
gi|152959017|gb|ABS46478.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
IP 31758]
gi|162352766|gb|ABX86714.1| flagellar basal-body rod protein FlgB [Yersinia pestis Angola]
gi|165913383|gb|EDR32005.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922168|gb|EDR39345.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990298|gb|EDR42599.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166208365|gb|EDR52845.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166961796|gb|EDR57817.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049517|gb|EDR60925.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055228|gb|EDR65025.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751184|gb|ACA68702.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
YPIII]
gi|186698137|gb|ACC88766.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
PB1/+]
gi|229680315|gb|EEO76414.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
gi|229688941|gb|EEO81006.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693511|gb|EEO83560.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701162|gb|EEO89191.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A]
gi|262361781|gb|ACY58502.1| flagellar basal body rod protein [Yersinia pestis D106004]
gi|262366083|gb|ACY62640.1| flagellar basal body rod protein [Yersinia pestis D182038]
gi|270335152|gb|EFA45929.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
gi|294354492|gb|ADE64833.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|320015470|gb|ADV99041.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 137
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRANGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPATTVQPPDLDLLFRIPDQPAMDGNTVDMDRERTNFADNSLKYQTDLTILGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|259908815|ref|YP_002649171.1| flagellar basal body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
gi|224964437|emb|CAX55946.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
gi|283478797|emb|CAY74713.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
12163]
gi|310767287|gb|ADP12237.1| flagellar basal body rod protein FlgB [Erwinia sp. Ejp617]
Length = 137
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFNTEALNLRAQRQEILASNIANADTPGYQARDI-DFASQLTKAVEHGRAQGSGMSLTV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P GNTV + E + Y+ + LI
Sbjct: 68 TSARHIPAETQQPPSMDLMYRIPDQPASDGNTVDMDRERTEFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M ++G
Sbjct: 128 KGMMSALQG 136
>gi|86139478|ref|ZP_01058047.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
gi|85823981|gb|EAQ44187.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
Length = 137
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
+ F+IA A+ +RQ +VSENIANA TP Y AKDI F+ + + M +
Sbjct: 11 FTELNVFKIAYSMASHAGKRQALVSENIANADTPGYHAKDIKPFKEVYAAGPRPGDMVAS 70
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+HL + S + W G + N+V I E+ +K + +
Sbjct: 71 RGSHLNGINGSNMDWAVTTSAV------GTDPNDNSVSIETEILNGVEVKRQHSRALAIY 124
Query: 118 KKLNSMVMHVV 128
K +++ +
Sbjct: 125 KSSMNILRTSL 135
>gi|293395580|ref|ZP_06639863.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
gi|291421899|gb|EFE95145.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
Length = 137
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + + S
Sbjct: 9 LRFGQEALNLRAQRQEILAGNIANADTPGYQARDI-DFASQLNKVMAQGRASGSGVALSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + L+
Sbjct: 68 TSARHIPAQNLQPPQLDLLFRVPDQPSIDGNTVDMDRERTNFADNSLKYQTDLTLLNGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|296531770|ref|ZP_06894592.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC 49957]
gi|296267909|gb|EFH13714.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC 49957]
Length = 133
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQNFL---- 53
+ I F+I+ L+ERQ ++++NIA+A TP YRA+D+ F+ +L L
Sbjct: 2 LDGIDVFRISGARMRHLAERQNVLAQNIAHADTPLYRARDVKPFQFDSALLRGPALPMLH 61
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+A T HL GL N I A Q+ GN+V + ++ K + Y+L
Sbjct: 62 LAATRPGHL------GLSRNGVTIAADRAQSYSEDPDGNSVNLEEQMVKQADVLKAYDLT 115
Query: 114 TKLIKKLNSMVMHVVRG 130
T + ++ +++ V G
Sbjct: 116 TAVYRRGAALLRTAVGG 132
>gi|238758113|ref|ZP_04619293.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
gi|238703651|gb|EEP96188.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
Length = 137
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N S+RQ+++S NIANA TP ++A+DI F + L + R + T + S
Sbjct: 9 LRFQQEALNLRSQRQEVLSSNIANADTPGFQARDI-DFSSQLKKVMEQGRVNGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKYQTSLTVLGSQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|296102911|ref|YP_003613057.1| flagellar basal body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057370|gb|ADF62108.1| flagellar basal body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 139
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFSSELKKVMERGRAEGSGVALAL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + GNTV + E + Y++ ++
Sbjct: 68 TSSRHIPAQAMTAPTTDLLYRIPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGGQI 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|126463751|ref|YP_001044865.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
17029]
gi|332559807|ref|ZP_08414129.1| FlgB2 [Rhodobacter sphaeroides WS8N]
gi|126105415|gb|ABN78093.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
17029]
gi|332277519|gb|EGJ22834.1| FlgB2 [Rhodobacter sphaeroides WS8N]
Length = 127
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + ++A A R ++V+ N+ANA TP YRA+D+ FE+ + + T
Sbjct: 2 FEKLEIVRMAQSMARHAGLRTEVVAHNLANADTPGYRAQDLPEFESYASGTVGLRTTRPG 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL+ +++S P++ +GNTV + +E+ ++ + +E+ + +
Sbjct: 62 HLRSAEASAADP------VPVEGPGAASPNGNTVSLEDEMVRAVAARQQHEMALAIYQSS 115
Query: 121 NSMVMHVV 128
+ ++ +
Sbjct: 116 SRLIRTSL 123
>gi|83594158|ref|YP_427910.1| flagellar basal-body rod protein FlgB [Rhodospirillum rubrum ATCC
11170]
gi|83577072|gb|ABC23623.1| Flagellar basal-body rod protein FlgB [Rhodospirillum rubrum ATCC
11170]
Length = 152
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETIL---NQNFLMA 55
+ + F++A +W ++RQK++SENIANA TPNYR+ D+ S F+ + M
Sbjct: 20 ISKLAIFKMAKMRLDWSAQRQKVLSENIANADTPNYRSHDLKSLNFKNLAMSEASKVAMV 79
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
RT HL G+ E GN V + ++ K Y L+ +
Sbjct: 80 RTDAGHLAP----GIPEPGPYREVTERFPYESAADGNEVVLEEQMSALSDTKNQYNLSIE 135
Query: 116 LIKKLNSMVMHVVR 129
L+KK +M+ R
Sbjct: 136 LVKKHLNMIKIATR 149
>gi|271500063|ref|YP_003333088.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
gi|270343618|gb|ACZ76383.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
Length = 139
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + LN+ RT + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELNKVMEQGRTSNQSVSLNL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A +E P T + GNTV + E Y+ + LI
Sbjct: 68 TSTRHIPAQAVEPPALDLLYRVPTQPALDGNTVDMDRERTNFADNSLKYQSSLTLISGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|254464199|ref|ZP_05077610.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
Y4I]
gi|206685107|gb|EDZ45589.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
Y4I]
Length = 129
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF---LMART 57
+ F+IA A +RQ +V++NIANA TP Y AKDI F + M+ T
Sbjct: 2 FTELNVFKIAYSMATHAGKRQALVAQNIANADTPGYHAKDIKPFTEVFAAGARQSSMSAT 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+HL + S + W A + TG +GN+V + EL K + ++ +
Sbjct: 62 RGSHLNGTAGSQMDW------AVISDETGSDPNGNSVSVEAELLKGVDTERQHKRAMAIY 115
Query: 118 KKLNSMVMHVV 128
K +++ +
Sbjct: 116 KSSMNILRASL 126
>gi|170743259|ref|YP_001771914.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
gi|168197533|gb|ACA19480.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
Length = 133
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + W RQK+++EN+ANA+TP ++A+D+ + + +A +
Sbjct: 6 LPLVSMLRNRMQWHQTRQKVLAENVANANTPGFKARDLR--APVFQPDGSVAAAGLPGIG 63
Query: 64 ESDSSGLHWNAHVIEAPLDQT---TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+S LH D+T V SGN V + +E+ K+ + Y+L L +K
Sbjct: 64 VERTSPLHMAGTGFTPSEDRTRTRFDVVPSGNAVSLEDEMLKAADNQADYQLAASLYQKS 123
Query: 121 NSMVMHVV 128
++ + V
Sbjct: 124 LQLLRNAV 131
>gi|292487936|ref|YP_003530811.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430]
gi|292899155|ref|YP_003538524.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
49946]
gi|291199003|emb|CBJ46114.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
49946]
gi|291553358|emb|CBA20403.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430]
gi|312172057|emb|CBX80314.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
BAA-2158]
Length = 137
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFNTEALNLRAQRQEILASNIANADTPGYQARDI-DFASQLTKAVEHGRAQGSAMSLAV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A P + GNTV + E + Y+ + LI
Sbjct: 68 TSARHIPAETQRPPSMDLMYRIPDQPSLDGNTVDMDRERTEFADNSLRYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M ++G
Sbjct: 128 KGMMSALQG 136
>gi|315498436|ref|YP_004087240.1| flagellar basal-body rod protein flgb [Asticcacaulis excentricus CB
48]
gi|315416448|gb|ADU13089.1| flagellar basal-body rod protein FlgB [Asticcacaulis excentricus CB
48]
Length = 137
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETIL-----NQNFLM 54
+ I + WL +RQK+V++N+ANASTP ++ +D+ F ++L +
Sbjct: 4 ENIGLLGALKEKMTWLGQRQKLVAQNVANASTPGFKPRDLKALDFASVLKGQQEQTELGL 63
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ T+ H+ + A V + + GN+V + ++ K + YE
Sbjct: 64 SVTNAGHMNVEGGNNFAPKAVV-----SPDSETTMDGNSVVLEEQMLKMAESRMQYEAAL 118
Query: 115 KLIKKLNSMVMHVVR 129
+K ++ +
Sbjct: 119 GFYQKSLGLIRMATK 133
>gi|294635607|ref|ZP_06714084.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC
23685]
gi|291091059|gb|EFE23620.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC
23685]
Length = 137
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + + S
Sbjct: 9 FRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSRILEQGRPDGSSMALSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E + Y+ + ++
Sbjct: 68 TSARHIPAQTVQPPTLDLLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDLTVLTGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMSVLQ 135
>gi|238764389|ref|ZP_04625339.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
33638]
gi|238697415|gb|EEP90182.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
33638]
Length = 137
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRVNGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|123442787|ref|YP_001006764.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|332161319|ref|YP_004297896.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|2494519|sp|Q56893|FLGB_YEREN RecName: Full=Flagellar basal-body rod protein flgB
gi|793898|emb|CAA88192.1| flgB [Yersinia enterocolitica]
gi|122089748|emb|CAL12601.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|318605239|emb|CBY26737.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665549|gb|ADZ42193.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 137
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRASGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|238751759|ref|ZP_04613247.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380]
gi|238710030|gb|EEQ02260.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380]
Length = 137
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLQKVMEQGRVNGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|50120636|ref|YP_049803.1| flagellar basal body rod protein FlgB [Pectobacterium atrosepticum
SCRI1043]
gi|49611162|emb|CAG74608.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
SCRI1043]
Length = 138
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKT 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + GNTV + E Y+ N ++
Sbjct: 68 TSVRHIPAQSFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTNLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|302384100|ref|YP_003819923.1| flagellar basal body rod protein [Brevundimonas subvibrioides ATCC
15264]
gi|302194728|gb|ADL02300.1| flagellar basal body rod protein [Brevundimonas subvibrioides ATCC
15264]
Length = 134
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQN--FLMARTH 58
I +WL ERQ++V++N+ANA TP Y A+D+ F + Q MART+
Sbjct: 6 IPLLGQIKGRLSWLDERQRVVAQNVANADTPGYVARDLKAPTDFAAAMRQGGGLGMARTN 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL ++G A D T + GN+V + ++ K + Y+ L +
Sbjct: 66 AAHL----TTGAPVARFTSSASPDSET--TLDGNSVVVEEQMLKMAESRMAYDAAIGLYQ 119
Query: 119 KLNSMVMHVVR 129
K SM+ +
Sbjct: 120 KSMSMLRMAAK 130
>gi|238793995|ref|ZP_04637613.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
29909]
gi|238726627|gb|EEQ18163.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
29909]
Length = 137
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R + T + S
Sbjct: 9 LRFQQEALNLRAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRANGTGVSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + ++
Sbjct: 68 TSARHIPASTVQPPDLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|254470270|ref|ZP_05083674.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062]
gi|211960581|gb|EEA95777.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062]
Length = 127
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETHLK 63
FQ Q W +RQ +++EN+ANA TP YR+KD+ SF +++
Sbjct: 1 MFQALRQKMQWHQQRQGVLAENVANADTPGYRSKDLKELSFSDMVDAEQGTGALRPVVTS 60
Query: 64 ES-DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+SG + + GN+V + ++ K + Y+ T L +
Sbjct: 61 AGHITSGGISAGVGTKVSKASSFERTPDGNSVVLEEQMMKIAQNQIDYQTATSLYSRSLG 120
Query: 123 MVMHVVR 129
M+ ++
Sbjct: 121 MLKSALK 127
>gi|144900469|emb|CAM77333.1| flagellar basal-body rod protein FlgB [Magnetospirillum
gryphiswaldense MSR-1]
Length = 132
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETILNQNFLMARTHE 59
+T +A +W++ RQ+++SENIANA+TP Y KD+ F+ +L+Q+ +
Sbjct: 3 DKLTLVNLAQSRMDWIARRQEVLSENIANANTPKYIPKDLKPYNFKDVLDQSVPAVKLRA 62
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T+ V + GN V + ++ K G K Y++ L ++
Sbjct: 63 TNTAHVVPEFRDEQRVV---DTKKVFESSPDGNAVVLEEQMAKVGEAKTAYDVAAGLFQR 119
Query: 120 LNSMVMHVV 128
M+ +
Sbjct: 120 QFKMLKTAL 128
>gi|251789165|ref|YP_003003886.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
gi|247537786|gb|ACT06407.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
Length = 139
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + LN+ R + S
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELNKVMEKGRVDGQSVSLSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P T + GNTV + E Y+ + LI
Sbjct: 68 TSSRHIPAQTAQPPALDLLYRVPTQPALDGNTVDMDRERTNFADNSLKYQGSLTLINGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|261339373|ref|ZP_05967231.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
ATCC 35316]
gi|288318174|gb|EFC57112.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
ATCC 35316]
Length = 138
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + R T + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFSSELKKVMERGRAEGTGVALAM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + GNTV + E + Y++ ++
Sbjct: 68 TSSRHIPAQAMTAPTADLLYRIPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGGQI 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|294679036|ref|YP_003579651.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
1003]
gi|294477856|gb|ADE87244.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
1003]
Length = 128
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTH 58
+ + FQ++ A + R+ +V+ N+ANA TP YRAKD+ SF M T
Sbjct: 2 FEKLEVFQMSQAMARHAALREGVVATNVANADTPGYRAKDVVSFADSYRTEHAQPMRATR 61
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL + S + VIE P GN V I +E+ K+ +K ++ + K
Sbjct: 62 PGHLGANGS----YTVSVIEDP--APDSSSPDGNGVSIEDEMVKAVDVKRQHDRALAIYK 115
Query: 119 KLNSMVMHVV 128
+++ +
Sbjct: 116 SSLNVLRASL 125
>gi|126738583|ref|ZP_01754288.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. SK209-2-6]
gi|126720382|gb|EBA17088.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. SK209-2-6]
Length = 129
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
+ F+IA A +RQ +VSENIANA TP Y AKDI F+ I + M +
Sbjct: 2 FTELNVFKIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFKEIYASGTRPGEMIAS 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL + S L W + G + N+V + E+ K ++ ++ +
Sbjct: 62 RSNHLNGAVGSDLDWAVSRSKE------GSDPNNNSVSLELEMLKGVEVQRQHKRALAVY 115
Query: 118 KKLNSMVMHVV 128
K +++ +
Sbjct: 116 KSSMNILRASL 126
>gi|261821150|ref|YP_003259256.1| flagellar basal body rod protein FlgB [Pectobacterium wasabiae
WPP163]
gi|261605163|gb|ACX87649.1| flagellar basal-body rod protein FlgB [Pectobacterium wasabiae
WPP163]
Length = 138
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKT 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + GNTV + E Y+ + ++
Sbjct: 68 TSVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTSLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 RGMMSVLQ 135
>gi|317047688|ref|YP_004115336.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
gi|316949305|gb|ADU68780.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
Length = 137
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N +ERQ+I++ NIANA TP Y+A+DI F + L++ R+ + L +
Sbjct: 9 LRFGTEALNLRAERQEILASNIANADTPGYQARDI-DFASQLSKVMENGRSEGSSLALNV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A P GNTV + E + Y+ + LI
Sbjct: 68 TSARHIEAQTNSQPSMDLLYRIPDQPAADGNTVDMDRERTQFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMSVLQG 136
>gi|304397201|ref|ZP_07379080.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
gi|304355350|gb|EFM19718.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
Length = 137
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + +
Sbjct: 9 LKFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASELSRVMSNGRAEGSSMALKV 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A AP GNTV + E + Y+ + LI
Sbjct: 68 TSARHIEAQTNGAPSMDMLYRIPDQPSADGNTVDMDRERTQFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMSVLQG 136
>gi|221640830|ref|YP_002527092.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
KD131]
gi|221161611|gb|ACM02591.1| Flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides
KD131]
Length = 127
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + ++A A R ++V+ N+ANA TP YRA+D+ FE+ + + T
Sbjct: 2 FEKLEIVRMAQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVGLRTTRPG 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL+ ++++ P++ +GNTV + +E+ ++ + +E+ + +
Sbjct: 62 HLRSAEATAADP------VPVEGRGAASPNGNTVSLEDEMVRAVAARQQHEMALAIYQSS 115
Query: 121 NSMVMHVV 128
+ ++ +
Sbjct: 116 SRLIRTSL 123
>gi|253688975|ref|YP_003018165.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755553|gb|ACT13629.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 138
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKT 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + GNTV + E Y+ + ++
Sbjct: 68 TSVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTSLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|157371210|ref|YP_001479199.1| flagellar basal body rod protein FlgB [Serratia proteamaculans 568]
gi|157322974|gb|ABV42071.1| flagellar basal-body rod protein FlgB [Serratia proteamaculans 568]
Length = 137
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F LN+ R + + +
Sbjct: 9 LRFGQEALNLRAQRQEILAANIANADTPGYQARDI-DFAGQLNKVLEQGRVSGSGIALNM 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + LI
Sbjct: 68 TSARHIPAQNMQPPQLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTLINGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|308186390|ref|YP_003930521.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
gi|308056900|gb|ADO09072.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
Length = 137
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + +
Sbjct: 9 LKFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASELSRVMSNGRAEGSSMALKV 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A AP GNTV + E + Y+ + LI
Sbjct: 68 TSARHIEAQTNGAPSMDMLYRIPDQPAADGNTVDMDRERTQFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMSVLQG 136
>gi|99082805|ref|YP_614959.1| flagellar basal body rod protein FlgB [Ruegeria sp. TM1040]
gi|99039085|gb|ABF65697.1| Flagellar basal-body rod protein flgB [Ruegeria sp. TM1040]
Length = 129
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MART 57
+ + F IA A +RQ +VSENIANA TP Y AKDI F + + M +
Sbjct: 2 FERLNVFNIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFREVFAASEAQGDMIAS 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+H+ + SG W E+ V + N+V + ++ K ++ +
Sbjct: 62 RGSHINGVNGSGFDWAVTTDESS------VDPNNNSVSLEEQILNGIEAKRQHDRALAIY 115
Query: 118 KKLNSMVMHVV 128
+ +++ +
Sbjct: 116 RSSMNILRASL 126
>gi|16760050|ref|NP_455667.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142179|ref|NP_805521.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161847|ref|ZP_03347557.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213424677|ref|ZP_03357442.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582034|ref|ZP_03363860.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213615929|ref|ZP_03371755.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648923|ref|ZP_03378976.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865508|ref|ZP_03387627.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289828583|ref|ZP_06546408.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|291084685|ref|ZP_06540939.2| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|25298905|pir||AG0639 probable flagellar basal-body rod protein FlgB (proximal rod
protein) STY1213 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16502344|emb|CAD08298.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137809|gb|AAO69370.1| putative flagellar basal-body rod protein FlgB [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
Length = 138
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + S
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + +P + GNTV + E + Y++ ++
Sbjct: 68 TSSRHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQL 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|238755327|ref|ZP_04616670.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC 29473]
gi|238706463|gb|EEP98837.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC 29473]
gi|253317692|gb|ACT22781.1| flagellar basal body protein FlgB [Yersinia ruckeri]
Length = 137
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I+S NIANA TP ++A+DI F + L + R + + + S
Sbjct: 9 LRFQQEALNLRAQRQEILSANIANADTPGFQARDI-DFSSQLQKVMEQGRVNGSGMSLSL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A I+ P + GNTV + E Y+ + ++
Sbjct: 68 TAARHIPAQNIQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTILGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|161503738|ref|YP_001570850.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865085|gb|ABX21708.1| hypothetical protein SARI_01823 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 138
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVSLTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + +P + GNTV + E + Y++ ++
Sbjct: 68 TSSHHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERAQFADNSLKYQMGLTVLGSQL 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|227112518|ref|ZP_03826174.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|227328335|ref|ZP_03832359.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 138
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + T +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSKTMEQGRVNGTGIALKT 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + GNTV + E Y+ + ++
Sbjct: 68 TSVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQSSLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|85706172|ref|ZP_01037267.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. 217]
gi|85669336|gb|EAQ24202.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. 217]
Length = 163
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + F++A A RQ +VS+N+ANA TP+Y A+DI +F + + T
Sbjct: 36 FEKLEIFRMAHAMARHAGARQAVVSQNMANADTPHYAARDIVAFAESYETDKTTHVSRAT 95
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
V E P T +GN+V + E+ ++ +K ++ + K
Sbjct: 96 RTGHLLGQYHRLGFDVAEDP---TAIKDPNGNSVSLETEMLRAVDVKRQHDRALAIYKSS 152
Query: 121 NSMVMHVV 128
+++ +
Sbjct: 153 LAVLRTAI 160
>gi|23008565|ref|ZP_00049958.1| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 129
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHETHL 62
+ F +ASQHA +L+ RQ ++ N+ANA+T +Y+A+D+ F +L + MA T THL
Sbjct: 5 VYLFDLASQHARYLAVRQATIAGNVANANTADYKARDVLPFAQVLARTGLDMASTAGTHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ S V E + V S ++V + E+ K+ + + L+T ++K +
Sbjct: 65 EAQGS-----RIPVRETQPREGWDVLESSSSVSLEQEMLKASDVSRQHNLDTAVVKSFHR 119
Query: 123 MVMHVVR 129
M+M +
Sbjct: 120 MLMAATK 126
>gi|16764530|ref|NP_460145.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62179691|ref|YP_216108.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161614603|ref|YP_001588568.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553038|ref|ZP_02346788.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994038|ref|ZP_02575130.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168237256|ref|ZP_02662314.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244773|ref|ZP_02669705.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264033|ref|ZP_02686006.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467126|ref|ZP_02700968.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822617|ref|ZP_02834617.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445886|ref|YP_002040428.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449295|ref|YP_002045173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194737837|ref|YP_002114173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250045|ref|YP_002146869.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262046|ref|ZP_03162120.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198242083|ref|YP_002215963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200390920|ref|ZP_03217531.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930812|ref|ZP_03221685.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205353088|ref|YP_002226889.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857318|ref|YP_002243969.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224584322|ref|YP_002638120.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911006|ref|ZP_04654843.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|120293|sp|P16437|FLGB_SALTY RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|47669|emb|CAA36309.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|217058|dbj|BAA02861.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16419691|gb|AAL20104.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62127324|gb|AAX65027.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161363967|gb|ABX67735.1| hypothetical protein SPAB_02353 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404549|gb|ACF64771.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407599|gb|ACF67818.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194713339|gb|ACF92560.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630354|gb|EDX48980.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213748|gb|ACH51145.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197240301|gb|EDY22921.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289757|gb|EDY29118.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197936599|gb|ACH73932.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603365|gb|EDZ01911.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320271|gb|EDZ05475.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205272869|emb|CAR37798.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322410|gb|EDZ10249.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328023|gb|EDZ14787.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205336425|gb|EDZ23189.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341041|gb|EDZ27805.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347333|gb|EDZ33964.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709121|emb|CAR33454.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468849|gb|ACN46679.1| flagellar basal body rod protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261246385|emb|CBG24194.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992948|gb|ACY87833.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157715|emb|CBW17207.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912161|dbj|BAJ36135.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086386|emb|CBY96159.1| Flagellar basal-body rod protein flgB putative proximal rod protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|321223792|gb|EFX48855.1| Flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616544|gb|EFY13453.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620515|gb|EFY17379.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622509|gb|EFY19354.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629660|gb|EFY26435.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632620|gb|EFY29366.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636885|gb|EFY33588.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641577|gb|EFY38215.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644067|gb|EFY40613.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650032|gb|EFY46450.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653958|gb|EFY50281.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658490|gb|EFY54752.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663348|gb|EFY59550.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670082|gb|EFY66222.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674854|gb|EFY70945.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676676|gb|EFY72743.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682598|gb|EFY78617.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686649|gb|EFY82628.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322714161|gb|EFZ05732.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323129444|gb|ADX16874.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195763|gb|EFZ80939.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198345|gb|EFZ83449.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203171|gb|EFZ88201.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209174|gb|EFZ94111.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209678|gb|EFZ94607.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217866|gb|EGA02581.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222154|gb|EGA06538.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224926|gb|EGA09184.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229668|gb|EGA13791.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232893|gb|EGA16989.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240628|gb|EGA24670.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242942|gb|EGA26963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250259|gb|EGA34148.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252634|gb|EGA36472.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258838|gb|EGA42491.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261027|gb|EGA44620.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266936|gb|EGA50421.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269977|gb|EGA53426.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326623711|gb|EGE30056.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628168|gb|EGE34511.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332988065|gb|AEF07048.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 138
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + +P + GNTV + E + Y++ ++
Sbjct: 68 TSSHHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQL 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|168234100|ref|ZP_02659158.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469067|ref|ZP_03075051.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194455431|gb|EDX44270.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331910|gb|EDZ18674.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 138
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + S
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + +P + GNTV + E + Y++ ++
Sbjct: 68 TSSHHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQL 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|270262404|ref|ZP_06190675.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
gi|270043088|gb|EFA16181.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
Length = 137
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F LN+ R + + +
Sbjct: 9 LRFGQEALNLRAQRQEILAANIANADTPGYQARDI-DFAGQLNKVLAQGRVSGSGIALNM 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E Y+ + LI
Sbjct: 68 TSARHIPAQNMQPPQLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKYQTDLTLINGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|329297213|ref|ZP_08254549.1| flagellar basal body rod protein FlgB [Plautia stali symbiont]
Length = 137
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + L +
Sbjct: 9 LRFGTEALNLRAQRQEILASNIANADTPGYQARDI-DFASQLSKAMQNGRAEGSSLALNV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A P GNTV + E + Y+ + LI
Sbjct: 68 TSSRHIEAQTNSQPALDLLYRIPDQPAADGNTVDMDRERTQFADNSLKYQTDLTLISSQI 127
Query: 122 SMVMHVVRG 130
+M V+ G
Sbjct: 128 KGMMSVLLG 136
>gi|56413839|ref|YP_150914.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197362762|ref|YP_002142399.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56128096|gb|AAV77602.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197094239|emb|CAR59744.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 138
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFTSELKKVMVRGREETGGVALTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + +P + GNTV + E + Y++ ++
Sbjct: 68 TSSHHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQL 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|300716215|ref|YP_003741018.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
gi|299062051|emb|CAX59167.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
Length = 137
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ N ++RQ+I++ NIANA TP Y+A+DI F + +N+ R + L +
Sbjct: 9 LRFNTEALNLRAQRQEILASNIANADTPGYQARDI-DFASQMNKVMEQGRAEGSGLSLAV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ + GNTV + E + Y+ + +I
Sbjct: 68 TSARHIPAETLQPASIDLMYRVPDQPAMDGNTVDMDRERTQFADNSLKYQTDLTVISGQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KSMMAVLQG 136
>gi|46200793|ref|ZP_00056513.2| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 132
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILN--QNFLMAR 56
+ +T F++A +W ++RQ++++ N+ANA+TP Y +D+ F+ +L Q +A
Sbjct: 2 LDQLTIFKMARARMDWAAQRQEVLAGNVANANTPRYLPRDVRKFDFKEMLAEVQAPPLAT 61
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
TH H+ S+ L P + T +GN V + ++ K K + + +
Sbjct: 62 THSQHIAGPASNPL--AVETTRKPFEST----PNGNGVVLEEQMAKISDTKGAHNMAADI 115
Query: 117 IKKLNSMVMHVV 128
+K M+ +
Sbjct: 116 YQKNLKMMRLAL 127
>gi|238919256|ref|YP_002932771.1| flagellar basal body rod protein FlgB [Edwardsiella ictaluri
93-146]
gi|238868825|gb|ACR68536.1| flagellar basal-body rod protein FlgB, putative [Edwardsiella
ictaluri 93-146]
Length = 137
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ N ++RQ+I++ NIANA TP Y+A+DI F + L++ R + + +
Sbjct: 9 FRFQQDALNLRAQRQEILAANIANADTPGYQARDI-DFASQLSRVLENGRPDGSGIALTL 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ P + GNTV + E + Y+ + ++
Sbjct: 68 TSARHIPAQNVQPPSLDLLFRVPDQPSLDGNTVNMNRERTQFADNSLRYQTDLTVLSGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KNMMAVLQ 135
>gi|146311243|ref|YP_001176317.1| flagellar basal body rod protein FlgB [Enterobacter sp. 638]
gi|145318119|gb|ABP60266.1| flagellar basal-body rod protein FlgB [Enterobacter sp. 638]
Length = 138
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+D+ F + L + R T + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAGNIANADTPGYQARDM-DFSSELKKVMDRGRAEGTGVALAL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + GNTV + E + Y+ ++
Sbjct: 68 TSSRHIPAQAMTAPSTDLLYRIPDQPSLDGNTVDMDRERTQFADNSLKYQTGLTVLGGQI 127
Query: 122 SMVMHVVRG 130
+ V++G
Sbjct: 128 RSMQSVLQG 136
>gi|237731004|ref|ZP_04561485.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
gi|226906543|gb|EEH92461.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
Length = 138
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+D+ F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDL-DFASELKKVMVRGREETGGVSLTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + + GNTV + E + Y++ +
Sbjct: 68 TSAQHIPAQTVSAPSTELLYRIPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTALGGQI 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|242238966|ref|YP_002987147.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
gi|242131023|gb|ACS85325.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
Length = 137
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + N ++RQ+I++ NIANA TP Y+A+DI F L + RT E+ L +
Sbjct: 9 FRFMQEALNLRAQRQEILAGNIANADTPGYQARDI-DFANELKKAMKQGRTSESSLSLTT 67
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H P + GNTV + E Y+ + L+
Sbjct: 68 TSVRHIEVSGESFPDLNLLYRVPDQPALDGNTVDMDRERTNFADNSLRYQTDLTLLGGQI 127
Query: 122 SMVMHVVR 129
+ V++
Sbjct: 128 KSMTSVLQ 135
>gi|218549199|ref|YP_002382990.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ATCC 35469]
gi|218356740|emb|CAQ89368.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ATCC 35469]
gi|324113868|gb|EGC07842.1| flagellar basal-body rod protein FlgB [Escherichia fergusonii B253]
gi|325497619|gb|EGC95478.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ECD227]
Length = 163
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+D+ F + L + + R + +
Sbjct: 34 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDL-DFASELKKIMVRGRNEAQGVSLTL 92
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + + GNTV + E + Y++ ++
Sbjct: 93 TSTQHIPAQALTAPGAELLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQMGLTVLGGQI 152
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 153 KSMMNVLQ 160
>gi|317492431|ref|ZP_07950860.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919770|gb|EFV41100.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 149
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP ++A+DI F + L + R + + ++
Sbjct: 21 LRFQQEALNLRAQRQEILAANIANADTPGFQARDI-DFSSQLTRAIEQGRVNGSGVELKT 79
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + GNTV + E + Y+ + +I
Sbjct: 80 TSSRHIPAQSFQPPELDMLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDLTVISGQI 139
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 140 KSMMSVLQ 147
>gi|221233941|ref|YP_002516377.1| flagellar basal body rod protein FlgB [Caulobacter crescentus
NA1000]
gi|220963113|gb|ACL94469.1| flagellar basal-body rod protein FlgB [Caulobacter crescentus
NA1000]
Length = 147
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 12/140 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----------QN 51
I F + +L+ERQK+V++N+AN+ TP YR D+ F + +
Sbjct: 4 DDIPLFGMLKSRLGYLTERQKLVAQNVANSDTPGYRPSDLKPFSFQASLMNNAAGPVYRG 63
Query: 52 FLMARTHETHLKESDSS--GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
A T + + +S G A + + GN V + +++ K +
Sbjct: 64 GRAAPTSGVTMIATTTSHMGRPNAPSAWRATAGADSETTLDGNAVSLEDQMLKMTDARMN 123
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ +K +M+ R
Sbjct: 124 YDAAISFYQKSMTMLRMAAR 143
>gi|157146229|ref|YP_001453548.1| flagellar basal body rod protein FlgB [Citrobacter koseri ATCC
BAA-895]
gi|157083434|gb|ABV13112.1| hypothetical protein CKO_01986 [Citrobacter koseri ATCC BAA-895]
Length = 138
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+D+ F + L + + R +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDM-DFASELKKVMVRGREETGGIALKL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + +P + GNTV + E + Y+ ++
Sbjct: 68 TSAQHIPAQTVASPSVDLLYRIPDQPSLDGNTVDMDRERTQFADNSLKYQTGLTVLGGQI 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|283833633|ref|ZP_06353374.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
29220]
gi|291071316|gb|EFE09425.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
29220]
Length = 138
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+D+ F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDL-DFASELKKVMVRGREQTGGVSLTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y++ +
Sbjct: 68 TSAQHIPAQTVSTPSTELLYRIPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTALGGQI 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|118588701|ref|ZP_01546109.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
gi|118438687|gb|EAV45320.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
Length = 134
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETH 61
+ FQ W RQ ++++NIANA TP Y A+D+ SF+ + + L T T
Sbjct: 6 LPLFQALKSKMQWHQTRQSVLAQNIANADTPGYMARDVKEYSFKDHIGRQSLNLSTDTTA 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
S + IE D T V SGN+V + ++ + Y+ T L K
Sbjct: 66 SGHIRGSLGATDKAKIE--EDDTFEVTPSGNSVNLEEQMMHITENQMDYQAATTLYTKGL 123
Query: 122 SMVMHVV 128
++ +
Sbjct: 124 GLIRTAL 130
>gi|163744318|ref|ZP_02151678.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45]
gi|161381136|gb|EDQ05545.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45]
Length = 119
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL----MARTHETHLKESDSSG 69
WLS RQK+VSEN+AN +TPN++A+D+SSF ++L+ + TH+ H
Sbjct: 1 MQWLSARQKVVSENVANVATPNFKARDVSSFASMLSGELSRDNGLVTTHDKHFTGVAQG- 59
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V E G + GNTV + + K+ I Y L +L +K M+ V
Sbjct: 60 ---TPGVREVTDRSVIGTTLDGNTVNLEEQAVKAAEIDDHYRLAAQLYRKSYDMLTMAVT 116
Query: 130 G 130
G
Sbjct: 117 G 117
>gi|283784869|ref|YP_003364734.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium
ICC168]
gi|282948323|emb|CBG87906.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium
ICC168]
Length = 138
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+++DI F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQSRDI-DFASELKKVMVRGRQETGGISLAL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A +P + + GNTV + E + Y+++ +
Sbjct: 68 TSAQHIPAQAFSSPSTELLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMSLTALGGQI 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KGMMNVLQG 136
>gi|110677658|ref|YP_680665.1| flagellar basal body rod protein FlgB [Roseobacter denitrificans
OCh 114]
gi|109453774|gb|ABG29979.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
denitrificans OCh 114]
Length = 132
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------FLM 54
+ + F++A A E+Q + ++N+AN+ TP+Y+A+D+ F +++
Sbjct: 2 FEKLEVFRMAHAMAVHAGEKQAVTAQNVANSDTPDYQARDVIPFSDTYSRDPANGGWGSQ 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T +TH+ + + + +D+ +GNTV + NE+ KS K ++
Sbjct: 62 KATRQTHINGAAA------GQTPDPIIDENGVGSPNGNTVSLENEMLKSLDAKRQHDRAL 115
Query: 115 KLIKKLNSMVMHVV 128
+ K S++ +
Sbjct: 116 AIYKSSLSILRATL 129
>gi|329890583|ref|ZP_08268926.1| flagellar basal body rod protein FlgB [Brevundimonas diminuta ATCC
11568]
gi|328845884|gb|EGF95448.1| flagellar basal body rod protein FlgB [Brevundimonas diminuta ATCC
11568]
Length = 134
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS---SFETILN--QNFLMARTH 58
+ WL +RQ+++++N+AN+ TP Y A+D+ F + M T+
Sbjct: 6 LPLLNQIKGRLGWLDDRQRVIAQNVANSDTPGYVARDLKTPTDFAEAMRTGGGLRMTTTN 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ A EA + + GN+V + ++ K + Y+ +
Sbjct: 66 ARHISP------PGQAARFEATRAPDSETTLDGNSVVVEEQMLKMAESRMAYDAAIGFYQ 119
Query: 119 KLNSMVMHVVR 129
K M+ +
Sbjct: 120 KSMQMIRLAAK 130
>gi|322832561|ref|YP_004212588.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
gi|321167762|gb|ADW73461.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
Length = 136
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
Q + N ++RQ+I+S NIANA TP Y+A+DI F + L + R + + S
Sbjct: 9 LQFQQEALNLRAQRQEILSANIANADTPGYQARDI-DFASQLQKVMEQGRASGSGISLSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ GNTV + E Y+ + ++
Sbjct: 68 TSDRHIPASNVQPADMDLMYRIPDQPSADGNTVDMDRERTNFADNSVRYQTDLTVLGGQI 127
Query: 122 SMVMHVVRG 130
+M V++G
Sbjct: 128 KGMMSVLQG 136
>gi|312115252|ref|YP_004012848.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
17100]
gi|311220381|gb|ADP71749.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
17100]
Length = 124
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHETHLK 63
IAS WL +++++++N+ANA+TP Y+A +I FE +++ M T HL+
Sbjct: 3 NVLDIASLQGRWLFAKERVLAQNVANANTPGYKAANIVPFEAVMHDIRLQMTSTSPMHLR 62
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S SG V + E+ KS + Y LN ++K +SM
Sbjct: 63 AEVS-----QISSTAQEDAAGGETFYSGGDVNLDQEMLKSSEVMRDYALNASVVKTFHSM 117
Query: 124 VMHVVRG 130
+ +G
Sbjct: 118 ISQAAKG 124
>gi|315296704|gb|EFU55999.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 16-3]
Length = 138
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ ++
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSVLSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|329849688|ref|ZP_08264534.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
C19]
gi|328841599|gb|EGF91169.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
C19]
Length = 137
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETIL-----NQNFL 53
+ I W S+RQK+V+EN+ANASTP ++ D+S FE ++ N
Sbjct: 3 LTDIPLMGALKSRMGWHSDRQKVVAENVANASTPGFKPHDLSPQDFEKMVRGETPQGNLG 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ T+ H+ + + A V+ +P +TT + GN V + ++ + + ++
Sbjct: 63 LTMTNTQHMAPA--TPFSPGAKVVLSPDSETT---MDGNAVVLEEQMLRMAESRMQFQAA 117
Query: 114 TKLIKKLNSMVMHVVR 129
+K +M+ V+
Sbjct: 118 VGFYEKSMAMMRMAVK 133
>gi|149912829|ref|ZP_01901363.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
gi|149813235|gb|EDM73061.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
Length = 129
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
Q + F+++ A RQ ++++N+AN+ TP Y A+D++ F T++ + + T
Sbjct: 2 FQNLDVFRLSHAMAVHAGTRQAVIAQNLANSDTPGYAARDVAPFSTLIGTDAPQFTSKAT 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ ++S I+ +GN+V + +E+ + +K ++ + K
Sbjct: 62 RVTHLNASSGPLQ---IDVSPRNDAQTDPNGNSVSVESEMLHAVSVKRQHDRAVAIYKSA 118
Query: 121 NSMVMHVV 128
++ V
Sbjct: 119 LGLLRTAV 126
>gi|83858797|ref|ZP_00952319.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
gi|83853620|gb|EAP91472.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
Length = 138
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILNQNFLMAR--- 56
I + + RQ++++EN+ANA+TP Y DI S FE +L +
Sbjct: 4 DDIPLLAMLRDTMGYHGARQRVIAENVANANTPGYTPNDIPRSEFERVLAGQQGLGAVGL 63
Query: 57 --THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
TH H ++ G AP +TT V+GN+V I ++ + + +E
Sbjct: 64 RTTHAQHYGG-ETGGGSAQFRTERAPDSETT---VNGNSVVIEEQMVDANENRMRFETAL 119
Query: 115 KLIKKLNSMVMHVVR 129
L +K +M+ R
Sbjct: 120 SLYQKSLNMIRMASR 134
>gi|304392509|ref|ZP_07374449.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130]
gi|303295139|gb|EFL89499.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130]
Length = 133
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETH 61
F +A QH+NW+ RQK+V+ NIA+A TP +R D++ F ++++ + MA TH H
Sbjct: 18 DLFSLAQQHSNWVEARQKVVAANIAHADTPGFRGSDVAPFASLMSADAKPVGMATTHAGH 77
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S +TG+ + +E+ + ++ + LNT ++K +
Sbjct: 78 MVADGSDAKIG------VVARDSTGI-------SLESEMAEISAVRREHGLNTAIVKSFH 124
Query: 122 SMVMHVVRG 130
+ + +RG
Sbjct: 125 RLYLTSIRG 133
>gi|332088753|gb|EGI93865.1| flagellar basal-body rod protein FlgB [Shigella boydii 5216-82]
Length = 138
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ N ++RQ++++ NIANA TP Y+A+DI F + L + R + + + +S
Sbjct: 11 FQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTS 69
Query: 69 GLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
H A + P + + GNTV + E + Y+++ +
Sbjct: 70 TQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQIKG 129
Query: 124 VMHVVR 129
+M+V++
Sbjct: 130 MMNVLQ 135
>gi|253773903|ref|YP_003036734.1| flagellar basal body rod protein FlgB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161179|ref|YP_003044287.1| flagellar basal body rod protein FlgB [Escherichia coli B str.
REL606]
gi|297516832|ref|ZP_06935218.1| flagellar basal body rod protein FlgB [Escherichia coli OP50]
gi|242376877|emb|CAQ31594.1| flagellar basal-body rod protein FlgB, subunit of Flagellar Motor
Complex and Flagellum [Escherichia coli BL21(DE3)]
gi|253324947|gb|ACT29549.1| flagellar basal-body rod protein FlgB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973080|gb|ACT38751.1| flagellar basal-body rod protein B [Escherichia coli B str. REL606]
gi|253977294|gb|ACT42964.1| flagellar basal-body rod protein B [Escherichia coli BL21(DE3)]
Length = 138
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVIQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|23009955|ref|ZP_00050813.1| COG1815: Flagellar basal body protein [Magnetospirillum
magnetotacticum MS-1]
Length = 138
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS----------FETILNQ 50
+ + + W RQ +++EN+ANA P +R +D++
Sbjct: 3 LTDLPLLGMLRNRMQWHQARQALLAENVANADMPGFRPRDLAEPSRSSAGLAAPLGAAIG 62
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ART H+ S SG + + + V+ SGN V + E+ K+G + Y
Sbjct: 63 GDGLARTDTRHIGLSAESGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQSDY 117
Query: 111 ELNTKLIKKLNSMVMHVV 128
+L L +K + V
Sbjct: 118 QLVASLYQKSLDALKIAV 135
>gi|254510289|ref|ZP_05122356.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
KLH11]
gi|221534000|gb|EEE36988.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
KLH11]
Length = 115
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETHLKESDSSG 69
A +RQ ++S N+ANA TP Y+ KDI+ F+ + M T + HL S
Sbjct: 1 MATHAGQRQAVISRNMANADTPGYQPKDITPFQNVFENSAAGGAMTATRQGHL-HGISDA 59
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
HW + + +GN V + E+ K+ +K ++ + + ++ +
Sbjct: 60 RHWAEYKAHPASE------PNGNGVSLEEEMLKAVDVKRQHDRALAIYRSSIGILRTSL 112
>gi|218689026|ref|YP_002397238.1| flagellar basal body rod protein FlgB [Escherichia coli ED1a]
gi|218426590|emb|CAR07418.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli ED1a]
gi|324007913|gb|EGB77132.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 57-2]
Length = 138
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTKHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|311280020|ref|YP_003942251.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1]
gi|308749215|gb|ADO48967.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1]
Length = 138
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIAN+ TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANSDTPGYQARDI-DFASELKKVMDRGRAETSGVSLAL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + AP + GNTV + E + Y+ ++
Sbjct: 68 TSERHIPAQTMSAPSVDLMYRVPDQPSMDGNTVDMDRERTQFADNSLQYQTGLTVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KGMMSVLQ 135
>gi|323947625|gb|EGB43629.1| flagellar basal-body rod protein FlgB [Escherichia coli H120]
Length = 138
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P+ + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPIAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|91210225|ref|YP_540211.1| flagellar basal body rod protein FlgB [Escherichia coli UTI89]
gi|215486282|ref|YP_002328713.1| flagellar basal body rod protein FlgB [Escherichia coli O127:H6
str. E2348/69]
gi|218557955|ref|YP_002390868.1| flagellar basal body rod protein FlgB [Escherichia coli S88]
gi|237706941|ref|ZP_04537422.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
gi|312968853|ref|ZP_07783060.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
gi|331646331|ref|ZP_08347434.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
gi|331657135|ref|ZP_08358097.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
gi|91071799|gb|ABE06680.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli
UTI89]
gi|215264354|emb|CAS08711.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O127:H6 str. E2348/69]
gi|218364724|emb|CAR02414.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli S88]
gi|222032826|emb|CAP75565.1| flagellar basal-body rod protein flgB [Escherichia coli LF82]
gi|226898151|gb|EEH84410.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
gi|294489848|gb|ADE88604.1| flagellar basal-body rod protein FlgB [Escherichia coli IHE3034]
gi|307627457|gb|ADN71761.1| flagellar basal body rod protein FlgB [Escherichia coli UM146]
gi|312286255|gb|EFR14168.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
gi|312945635|gb|ADR26462.1| flagellar basal body rod protein FlgB [Escherichia coli O83:H1 str.
NRG 857C]
gi|315287372|gb|EFU46783.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 110-3]
gi|320196445|gb|EFW71068.1| Flagellar basal-body rod protein FlgB [Escherichia coli WV_060327]
gi|323190585|gb|EFZ75857.1| flagellar basal-body rod protein FlgB [Escherichia coli RN587/1]
gi|323957897|gb|EGB53609.1| flagellar basal-body rod protein FlgB [Escherichia coli H263]
gi|330910887|gb|EGH39397.1| flagellar basal-body rod protein FlgB [Escherichia coli AA86]
gi|331045083|gb|EGI17210.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
gi|331055383|gb|EGI27392.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
Length = 138
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTKHIPAQALTPPSAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|58039962|ref|YP_191926.1| flagellar basal-body rod protein FlgB [Gluconobacter oxydans 621H]
gi|58002376|gb|AAW61270.1| Flagellar basal-body rod protein FlgB [Gluconobacter oxydans 621H]
Length = 130
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-NFLMARTHETHLK 63
F + NWL RQ++++ NIAN+ TP+Y+AKD+S FE +++ + T H+
Sbjct: 13 DLFSLGRDRMNWLQARQQVLAGNIANSDTPDYQAKDVSPFEAAMSEFDITPTVTQPGHIG 72
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++SG H ++ T+ + GN V + ++ + + L + K SM
Sbjct: 73 Y-NASGTHT--------IETTSEQSLDGNQVSLDQQMEQVADVNDQQHLAVNVYSKYLSM 123
Query: 124 VMHVV 128
+
Sbjct: 124 FQTAL 128
>gi|16129036|ref|NP_415591.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|24112484|ref|NP_706994.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
301]
gi|26247213|ref|NP_753253.1| flagellar basal body rod protein FlgB [Escherichia coli CFT073]
gi|30062611|ref|NP_836782.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
2457T]
gi|74311635|ref|YP_310054.1| flagellar basal body rod protein FlgB [Shigella sonnei Ss046]
gi|89107919|ref|AP_001699.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. W3110]
gi|110641249|ref|YP_668979.1| flagellar basal body rod protein FlgB [Escherichia coli 536]
gi|110805091|ref|YP_688611.1| flagellar basal body rod protein FlgB [Shigella flexneri 5 str.
8401]
gi|157157889|ref|YP_001462307.1| flagellar basal body rod protein FlgB [Escherichia coli E24377A]
gi|157160600|ref|YP_001457918.1| flagellar basal body rod protein FlgB [Escherichia coli HS]
gi|170020531|ref|YP_001725485.1| flagellar basal body rod protein FlgB [Escherichia coli ATCC 8739]
gi|170080724|ref|YP_001730044.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|170683265|ref|YP_001744107.1| flagellar basal body rod protein FlgB [Escherichia coli SMS-3-5]
gi|187732438|ref|YP_001880755.1| flagellar basal body rod protein FlgB [Shigella boydii CDC 3083-94]
gi|191168464|ref|ZP_03030252.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
gi|191172447|ref|ZP_03033988.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
gi|193064567|ref|ZP_03045647.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
gi|193069459|ref|ZP_03050413.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
gi|194428410|ref|ZP_03060950.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
gi|194438104|ref|ZP_03070197.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
gi|209918327|ref|YP_002292411.1| flagellar basal body rod protein FlgB [Escherichia coli SE11]
gi|218553652|ref|YP_002386565.1| flagellar basal body rod protein FlgB [Escherichia coli IAI1]
gi|218694607|ref|YP_002402274.1| flagellar basal body rod protein FlgB [Escherichia coli 55989]
gi|218700424|ref|YP_002408053.1| flagellar basal body rod protein FlgB [Escherichia coli IAI39]
gi|218704481|ref|YP_002412000.1| flagellar basal body rod protein FlgB [Escherichia coli UMN026]
gi|227886569|ref|ZP_04004374.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 83972]
gi|238900327|ref|YP_002926123.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|256018670|ref|ZP_05432535.1| flagellar basal body rod protein FlgB [Shigella sp. D9]
gi|256023229|ref|ZP_05437094.1| flagellar basal body rod protein FlgB [Escherichia sp. 4_1_40B]
gi|260843313|ref|YP_003221091.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O103:H2 str. 12009]
gi|260854556|ref|YP_003228447.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O26:H11 str. 11368]
gi|260867436|ref|YP_003233838.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O111:H- str. 11128]
gi|293404357|ref|ZP_06648351.1| flgB [Escherichia coli FVEC1412]
gi|293409439|ref|ZP_06653015.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
gi|293414368|ref|ZP_06657017.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
gi|293433363|ref|ZP_06661791.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
gi|298380137|ref|ZP_06989742.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
gi|300816775|ref|ZP_07096995.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
gi|300821146|ref|ZP_07101295.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
gi|300899592|ref|ZP_07117831.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
gi|300902464|ref|ZP_07120446.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
gi|300918675|ref|ZP_07135256.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
gi|300922599|ref|ZP_07138699.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
gi|300928375|ref|ZP_07143909.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
gi|300950168|ref|ZP_07164113.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
gi|300954387|ref|ZP_07166841.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
gi|300974377|ref|ZP_07172589.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
gi|300982624|ref|ZP_07176208.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
gi|301023260|ref|ZP_07187057.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
gi|301029712|ref|ZP_07192766.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
gi|301051143|ref|ZP_07197973.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
gi|301304988|ref|ZP_07211090.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
gi|301328557|ref|ZP_07221618.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
gi|301644985|ref|ZP_07244951.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
gi|306814078|ref|ZP_07448251.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
gi|307137708|ref|ZP_07497064.1| flagellar basal body rod protein FlgB [Escherichia coli H736]
gi|307310149|ref|ZP_07589799.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
gi|309798067|ref|ZP_07692442.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
gi|312971210|ref|ZP_07785388.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
gi|331641617|ref|ZP_08342752.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|331652126|ref|ZP_08353145.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
gi|331662479|ref|ZP_08363402.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
gi|331667473|ref|ZP_08368337.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
gi|331672593|ref|ZP_08373382.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
gi|331676864|ref|ZP_08377560.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
gi|331682575|ref|ZP_08383194.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
gi|332279739|ref|ZP_08392152.1| flagellar component of cell-proximal portion of basal-body rod
[Shigella sp. D9]
gi|78100008|sp|P0ABX0|FLGB_ECOL6 RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|78100009|sp|P0ABW9|FLGB_ECOLI RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|78100010|sp|P0ABX1|FLGB_SHIFL RecName: Full=Flagellar basal-body rod protein flgB; AltName:
Full=Putative proximal rod protein
gi|26107614|gb|AAN79813.1|AE016759_87 Flagellar basal-body rod protein flgB [Escherichia coli CFT073]
gi|1787313|gb|AAC74157.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|4062650|dbj|BAA35881.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K12 substr. W3110]
gi|24051370|gb|AAN42701.1| flagellar basal-body rod protein FlgB (proximal rod protein)
[Shigella flexneri 2a str. 301]
gi|30040857|gb|AAP16588.1| flagellar basal-body rod protein FlgB (proximal rod protein)
[Shigella flexneri 2a str. 2457T]
gi|73855112|gb|AAZ87819.1| flagellar protein for cell-proximal portion of basal-body rod
[Shigella sonnei Ss046]
gi|110342841|gb|ABG69078.1| flagellar basal-body rod protein FlgB [Escherichia coli 536]
gi|110614639|gb|ABF03306.1| Flagellar basal body protein [Shigella flexneri 5 str. 8401]
gi|157066280|gb|ABV05535.1| flagellar basal-body rod protein FlgB [Escherichia coli HS]
gi|157079919|gb|ABV19627.1| flagellar basal-body rod protein FlgB [Escherichia coli E24377A]
gi|169755459|gb|ACA78158.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC 8739]
gi|169888559|gb|ACB02266.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|170520983|gb|ACB19161.1| flagellar basal-body rod protein FlgB [Escherichia coli SMS-3-5]
gi|187429430|gb|ACD08704.1| flagellar basal-body rod protein FlgB [Shigella boydii CDC 3083-94]
gi|190901483|gb|EDV61244.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
gi|190907331|gb|EDV66929.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
gi|192927819|gb|EDV82433.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
gi|192957207|gb|EDV87656.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
gi|194413462|gb|EDX29744.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
gi|194423040|gb|EDX39034.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
gi|209911586|dbj|BAG76660.1| flagellar basal-body rod protein FlgB [Escherichia coli SE11]
gi|218351339|emb|CAU97045.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 55989]
gi|218360420|emb|CAQ97972.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI1]
gi|218370410|emb|CAR18217.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI39]
gi|218431578|emb|CAR12457.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli UMN026]
gi|227836773|gb|EEJ47239.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 83972]
gi|238861101|gb|ACR63099.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|257753205|dbj|BAI24707.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O26:H11 str. 11368]
gi|257758460|dbj|BAI29957.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O103:H2 str. 12009]
gi|257763792|dbj|BAI35287.1| flagellar component FlgB of cell-proximal portion of basal-body rod
[Escherichia coli O111:H- str. 11128]
gi|260449787|gb|ACX40209.1| flagellar basal-body rod protein FlgB [Escherichia coli DH1]
gi|281600493|gb|ADA73477.1| Flagellar basal-body rod protein flgB [Shigella flexneri 2002017]
gi|284920896|emb|CBG33959.1| flagellar basal-body rod protein FlgB [Escherichia coli 042]
gi|291324182|gb|EFE63604.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
gi|291428943|gb|EFF01968.1| flgB [Escherichia coli FVEC1412]
gi|291434426|gb|EFF07399.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
gi|291469907|gb|EFF12391.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
gi|298279835|gb|EFI21343.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
gi|299877400|gb|EFI85611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
gi|300297164|gb|EFJ53549.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
gi|300307089|gb|EFJ61609.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
gi|300318623|gb|EFJ68407.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
gi|300356863|gb|EFJ72733.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
gi|300397105|gb|EFJ80643.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
gi|300405496|gb|EFJ89034.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
gi|300410620|gb|EFJ94158.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
gi|300414169|gb|EFJ97479.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
gi|300421076|gb|EFK04387.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
gi|300450515|gb|EFK14135.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
gi|300463633|gb|EFK27126.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
gi|300526445|gb|EFK47514.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
gi|300530549|gb|EFK51611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
gi|300839706|gb|EFK67466.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
gi|300844949|gb|EFK72709.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
gi|301076714|gb|EFK91520.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
gi|305852715|gb|EFM53163.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
gi|306909867|gb|EFN40361.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
gi|307553075|gb|ADN45850.1| flagellar basal-body rod protein FlgB [Escherichia coli ABU 83972]
gi|308118350|gb|EFO55612.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
gi|309701345|emb|CBJ00646.1| flagellar basal-body rod protein FlgB [Escherichia coli ETEC
H10407]
gi|310336412|gb|EFQ01598.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
gi|313650477|gb|EFS14884.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2a str.
2457T]
gi|315060351|gb|ADT74678.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli W]
gi|315135705|dbj|BAJ42864.1| flgB [Escherichia coli DH1]
gi|315253874|gb|EFU33842.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 85-1]
gi|315291067|gb|EFU50430.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 153-1]
gi|315618243|gb|EFU98833.1| flagellar basal-body rod protein FlgB [Escherichia coli 3431]
gi|320173526|gb|EFW48722.1| Flagellar basal-body rod protein FlgB [Shigella dysenteriae CDC
74-1112]
gi|320200969|gb|EFW75553.1| Flagellar basal-body rod protein FlgB [Escherichia coli EC4100B]
gi|323156880|gb|EFZ43014.1| flagellar basal-body rod protein FlgB [Escherichia coli EPECa14]
gi|323163755|gb|EFZ49574.1| flagellar basal-body rod protein FlgB [Escherichia coli E128010]
gi|323165581|gb|EFZ51368.1| flagellar basal-body rod protein FlgB [Shigella sonnei 53G]
gi|323174798|gb|EFZ60413.1| flagellar basal-body rod protein FlgB [Escherichia coli LT-68]
gi|323175696|gb|EFZ61290.1| flagellar basal-body rod protein FlgB [Escherichia coli 1180]
gi|323185804|gb|EFZ71165.1| flagellar basal-body rod protein FlgB [Escherichia coli 1357]
gi|323379088|gb|ADX51356.1| flagellar basal-body rod protein FlgB [Escherichia coli KO11]
gi|323937813|gb|EGB34077.1| flagellar basal-body rod protein FlgB [Escherichia coli E1520]
gi|323942542|gb|EGB38709.1| flagellar basal-body rod protein FlgB [Escherichia coli E482]
gi|323962672|gb|EGB58250.1| flagellar basal-body rod protein FlgB [Escherichia coli H489]
gi|323973338|gb|EGB68527.1| flagellar basal-body rod protein FlgB [Escherichia coli TA007]
gi|324013347|gb|EGB82566.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 60-1]
gi|324017423|gb|EGB86642.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 117-3]
gi|324117356|gb|EGC11263.1| flagellar basal-body rod protein FlgB [Escherichia coli E1167]
gi|331038415|gb|EGI10635.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|331050404|gb|EGI22462.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
gi|331060901|gb|EGI32865.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
gi|331065058|gb|EGI36953.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
gi|331070236|gb|EGI41602.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
gi|331075553|gb|EGI46851.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
gi|331080206|gb|EGI51385.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
gi|332102091|gb|EGJ05437.1| flagellar component of cell-proximal portion of basal-body rod
[Shigella sp. D9]
gi|332342619|gb|AEE55953.1| flagellar basal-body rod protein FlgB [Escherichia coli UMNK88]
gi|332758231|gb|EGJ88554.1| flagellar basal-body rod protein FlgB [Shigella flexneri 4343-70]
gi|332759615|gb|EGJ89920.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2747-71]
gi|332761417|gb|EGJ91701.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-671]
gi|332767679|gb|EGJ97872.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2930-71]
gi|333005507|gb|EGK25025.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-218]
gi|333008274|gb|EGK27748.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-272]
gi|333019331|gb|EGK38614.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-304]
gi|333019764|gb|EGK39036.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-227]
Length = 138
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|163733138|ref|ZP_02140582.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
litoralis Och 149]
gi|161393673|gb|EDQ17998.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
litoralis Och 149]
Length = 141
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------FLM 54
+ + F+++ A ++Q + ++N+AN+ TP+++AKD+ +F +
Sbjct: 11 FEKLELFRMSHAMAVHAGQKQAVTAQNVANSDTPDFKAKDLIAFSDAYRLDPSNGGWGSQ 70
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T +TH+ + + + +D+ +GNTV + NE+ KS K ++
Sbjct: 71 KATRQTHIHGAAA------GQTPDPIVDENGVGSPNGNTVSLENEMLKSLDAKRQHDRAL 124
Query: 115 KLIKKLNSMVMHVV 128
+ K S++ +
Sbjct: 125 AIYKSSLSILRATL 138
>gi|240139295|ref|YP_002963770.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
AM1]
gi|240009267|gb|ACS40493.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
AM1]
Length = 138
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------- 50
+ + + +W RQ +++EN+ANA P +R +D++ +
Sbjct: 3 LTDLPLLGMLRTRMHWHQARQALLAENVANADMPGFRPRDLAEPSAASMKLATPVAASVG 62
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ART TH+ + S+G + + + V+ SGN V + E+ K+G + Y
Sbjct: 63 GDGLARTDSTHIGMTASAGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQSDY 117
Query: 111 ELNTKLIKKLNSMVMHVV 128
+L L +K + V
Sbjct: 118 QLVASLYQKSLDALKIAV 135
>gi|92114101|ref|YP_574029.1| flagellar basal-body rod protein FlgB [Chromohalobacter salexigens
DSM 3043]
gi|91797191|gb|ABE59330.1| flagellar basal-body rod protein FlgB [Chromohalobacter salexigens
DSM 3043]
Length = 139
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + ERQK+++ NIANA TPNY+A+D F L++ E L
Sbjct: 7 GYLDYHQEALGLRHERQKVLANNIANADTPNYKARDF-DFSAELDRAMQSGGGREGGLSL 65
Query: 65 SDSSGLHWNAH------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ +S H A V + + GNTV + E Y+ NT ++
Sbjct: 66 ATTSARHIPAQAPGGGGVHDLLYRVPEQPSLDGNTVDMDRERAAFADNALRYQANTTILT 125
Query: 119 KLNSMVMHVVR 129
+ + ++
Sbjct: 126 RKIQGIKGAMQ 136
>gi|307945655|ref|ZP_07660991.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
gi|307771528|gb|EFO30753.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
Length = 138
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I FQ W RQ ++SEN+ANA TP Y A+++++F + + + K
Sbjct: 10 IPLFQALKSKMQWHQVRQGVLSENVANADTPRYSAREVTAFSFADHVGLAQSGLSTSVTK 69
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SG +A V SGN V + ++ K + Y+ T L + +
Sbjct: 70 VGHISGSAAPGVASKAEERDMFEVTPSGNNVVLEEQMMKVTQNQMDYQAATTLYSRGLGL 129
Query: 124 VMHVV 128
+ +
Sbjct: 130 IRTAL 134
>gi|281178182|dbj|BAI54512.1| flagellar basal-body rod protein FlgB [Escherichia coli SE15]
Length = 138
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPSAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|323967014|gb|EGB62440.1| flagellar basal-body rod protein FlgB [Escherichia coli M863]
gi|323976554|gb|EGB71642.1| flagellar basal-body rod protein FlgB [Escherichia coli TW10509]
gi|327253472|gb|EGE65110.1| flagellar basal-body rod protein FlgB [Escherichia coli STEC_7v]
Length = 138
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDETSMVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|15801190|ref|NP_287207.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
EDL933]
gi|15830705|ref|NP_309478.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. Sakai]
gi|168747151|ref|ZP_02772173.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4113]
gi|168758635|ref|ZP_02783642.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4401]
gi|168764485|ref|ZP_02789492.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4501]
gi|168767732|ref|ZP_02792739.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4486]
gi|168773918|ref|ZP_02798925.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4196]
gi|168783603|ref|ZP_02808610.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4076]
gi|168790008|ref|ZP_02815015.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC869]
gi|168802018|ref|ZP_02827025.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC508]
gi|195935463|ref|ZP_03080845.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. EC4024]
gi|208809503|ref|ZP_03251840.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4206]
gi|208815239|ref|ZP_03256418.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4045]
gi|208822644|ref|ZP_03262963.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4042]
gi|209398681|ref|YP_002269919.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4115]
gi|217328423|ref|ZP_03444505.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. TW14588]
gi|254792455|ref|YP_003077292.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. TW14359]
gi|261227022|ref|ZP_05941303.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK2000]
gi|261256256|ref|ZP_05948789.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK966]
gi|291282093|ref|YP_003498911.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str.
CB9615]
gi|12514611|gb|AAG55819.1|AE005317_8 flagellar biosynthesis, cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. EDL933]
gi|13360915|dbj|BAB34874.1| flagellar rod protein FlgB [Escherichia coli O157:H7 str. Sakai]
gi|187770374|gb|EDU34218.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4196]
gi|188018167|gb|EDU56289.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4113]
gi|188999105|gb|EDU68091.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4076]
gi|189354564|gb|EDU72983.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4401]
gi|189363078|gb|EDU81497.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4486]
gi|189365535|gb|EDU83951.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4501]
gi|189370453|gb|EDU88869.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC869]
gi|189375929|gb|EDU94345.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC508]
gi|208729304|gb|EDZ78905.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4206]
gi|208731887|gb|EDZ80575.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4045]
gi|208738129|gb|EDZ85812.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4042]
gi|209160081|gb|ACI37514.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC4115]
gi|209773408|gb|ACI85016.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773410|gb|ACI85017.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773412|gb|ACI85018.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773414|gb|ACI85019.1| flagellar rod protein FlgB [Escherichia coli]
gi|209773416|gb|ACI85020.1| flagellar rod protein FlgB [Escherichia coli]
gi|217318850|gb|EEC27276.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. TW14588]
gi|254591855|gb|ACT71216.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. TW14359]
gi|290761966|gb|ADD55927.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str.
CB9615]
gi|320189756|gb|EFW64412.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. EC1212]
gi|320637524|gb|EFX07324.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. G5101]
gi|320643085|gb|EFX12286.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
str. 493-89]
gi|320648543|gb|EFX17198.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
str. H 2687]
gi|320653857|gb|EFX21931.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659337|gb|EFX26906.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664472|gb|EFX31623.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
str. LSU-61]
gi|326339295|gb|EGD63109.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. 1125]
gi|326344744|gb|EGD68492.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
str. 1044]
Length = 138
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRNATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|257471392|ref|ZP_05635391.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|11386804|sp|P57419|FLGB_BUCAI RecName: Full=Flagellar basal-body rod protein flgB
gi|311086075|gb|ADP66157.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086646|gb|ADP66727.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087232|gb|ADP67312.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087751|gb|ADP67830.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 133
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMART 57
F Q N S+RQ+I+S NIANA TP Y++ D +F+ LN+ + +T
Sbjct: 7 QIFNFHQQALNLCSQRQEILSANIANADTPGYKSIDF-NFKNELNKTLYKNKKTIFLKKT 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL E H N +++ T ++ GNTV + E + + Y+ + I
Sbjct: 66 SPNHLNE-----KHKNLFLLKTIPVLTNQIKQDGNTVNMDRERIEFLNNSIKYQSSLVFI 120
Query: 118 KKLNSMVMHVVRG 130
K +M+V++G
Sbjct: 121 KNEIKNMMYVLKG 133
>gi|146278634|ref|YP_001168793.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
17025]
gi|145556875|gb|ABP71488.1| Flagellar basal body protein-like protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 127
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + ++A A R +++ N+AN+ TP YRA+D+ FE+ + T
Sbjct: 2 FEKLELVRMAQAMARHAGARTDVIARNVANSDTPGYRARDLPDFESYAEGRTGLRGTRAG 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL+ + + I +GN+V + E+ K+ + +E+ + +
Sbjct: 62 HLRSAAAVAAEPVPAGI------MGTASPNGNSVSLEEEMVKAVSARQQHEMALSIYQSS 115
Query: 121 NSMVMHVV 128
+ ++ +
Sbjct: 116 SRLIRTSL 123
>gi|320179227|gb|EFW54185.1| Flagellar basal-body rod protein FlgB [Shigella boydii ATCC 9905]
Length = 138
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRISDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|218530782|ref|YP_002421598.1| flagellar basal body rod protein FlgB [Methylobacterium
chloromethanicum CM4]
gi|254561751|ref|YP_003068846.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
DM4]
gi|218523085|gb|ACK83670.1| flagellar basal body rod protein FlgB [Methylobacterium
chloromethanicum CM4]
gi|254269029|emb|CAX24990.1| flagellar basal-body rod protein FlgB [Methylobacterium extorquens
DM4]
Length = 138
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------- 50
+ + + +W RQ +++EN+ANA P +R +D++ +
Sbjct: 3 LTDLPLLGMLRTRMHWHQARQALLAENVANADMPGFRPRDLAEPSAASMKLATPVAASVG 62
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ART TH+ + S+G + + + V+ SGN V + E+ K+G + Y
Sbjct: 63 GDGIARTDSTHIGMTASAGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQADY 117
Query: 111 ELNTKLIKKLNSMVMHVV 128
+L L +K + V
Sbjct: 118 QLVASLYQKSLDALKIAV 135
>gi|119384842|ref|YP_915898.1| flagellar basal body rod protein FlgB [Paracoccus denitrificans
PD1222]
gi|119374609|gb|ABL70202.1| flagellar basal-body rod protein FlgB [Paracoccus denitrificans
PD1222]
Length = 129
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTH 58
+ I ++AS ERQK+++ N+ANA TP +R++D++ F M +
Sbjct: 2 LDRIDTLRMASSLTAHAVERQKLIARNVANADTPGFRSRDLAGFAETYRSHGPTGMRASR 61
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL E D +GNTV + E+++S K ++L+ + K
Sbjct: 62 PGHLTEGRGGDGAGRI------TDAGGEPAPNGNTVSLEEEMFRSAAAKRQFDLSLAVTK 115
Query: 119 KLNSMVMHVV 128
S+V +
Sbjct: 116 SSLSLVRTSL 125
>gi|188493729|ref|ZP_03000999.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
gi|188488928|gb|EDU64031.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
Length = 138
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+++V++
Sbjct: 128 KGMINVLQ 135
>gi|254292928|ref|YP_003058951.1| flagellar basal-body rod protein FlgB [Hirschia baltica ATCC 49814]
gi|254041459|gb|ACT58254.1| flagellar basal-body rod protein FlgB [Hirschia baltica ATCC 49814]
Length = 149
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILNQN---------- 51
+ F + + L ERQK++S+N++N STP Y KD+ SSF L +
Sbjct: 7 MPIFGMMKARMDMLGERQKVLSQNVSNVSTPGYTPKDVDISSFNAALAKGKVGNNAGAGG 66
Query: 52 ----FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
MA TH H+ S S G IE D T + GN V + +++ K +
Sbjct: 67 PANAGAMAVTHPGHIAASASRGSLVAGAYIEKAPDSET--TLDGNGVVVEDQMMKIAETR 124
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E L K SM+ +
Sbjct: 125 MEFETMIGLYNKSLSMMRLAAK 146
>gi|163852028|ref|YP_001640071.1| flagellar basal body rod protein FlgB [Methylobacterium extorquens
PA1]
gi|163663633|gb|ABY31000.1| putative flagellar basal-body rod protein [Methylobacterium
extorquens PA1]
Length = 138
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------- 50
+ + + +W RQ +++EN+ANA P +R +D++ +
Sbjct: 3 LTDLPLLGMLRTRMHWHQARQALLAENVANADMPGFRPRDLAEPSAASMKLATPVAASVG 62
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ART TH+ + S G + + + V+ SGN V + E+ K+G + Y
Sbjct: 63 GDGLARTDSTHIGMTASVGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQADY 117
Query: 111 ELNTKLIKKLNSMVMHVV 128
+L L +K + V
Sbjct: 118 QLVASLYQKSLDALKIAV 135
>gi|300938638|ref|ZP_07153367.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
gi|300456423|gb|EFK19916.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
Length = 138
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+ +DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQTRDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|328543165|ref|YP_004303274.1| flagellar basal-body rod protein B [polymorphum gilvum SL003B-26A1]
gi|326412911|gb|ADZ69974.1| Flagellar basal-body rod protein B [Polymorphum gilvum SL003B-26A1]
Length = 133
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE-----TILNQNFLMA 55
+ + FQ W RQ ++SEN+ANA +P YRA+D+ F+ + A
Sbjct: 3 LTNLPMFQALKSKMQWHQTRQSLLSENVANADSPQYRARDLKPFDLSKQVDLKPAGLATA 62
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
RT HL ++ +T +GN V + ++ K + ++ T
Sbjct: 63 RTQAGHLPGVMTAASKMEEA------SETFETTPNGNNVVLEEQMMKVTENQMDFQAATA 116
Query: 116 LIKKLNSMVMHVV 128
L + ++ +
Sbjct: 117 LYTRSIGLIRTAL 129
>gi|170768328|ref|ZP_02902781.1| flagellar basal-body rod protein FlgB [Escherichia albertii
TW07627]
gi|170123094|gb|EDS92025.1| flagellar basal-body rod protein FlgB [Escherichia albertii
TW07627]
Length = 138
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPAYQARDI-DFASELKRVMQRRRDETRVVALTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A V+ P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQVLTPPSAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSSQI 127
Query: 122 SMVMHVVR 129
VM+V++
Sbjct: 128 KGVMNVLQ 135
>gi|296534151|ref|ZP_06896647.1| probable flagellar basal-body rod protein FlgB [Roseomonas
cervicalis ATCC 49957]
gi|296265527|gb|EFH11656.1| probable flagellar basal-body rod protein FlgB [Roseomonas
cervicalis ATCC 49957]
Length = 129
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTH 58
+P +A Q NWL +RQK++++NIANA+TP ++ +D+ +FE +L + N +ART
Sbjct: 4 RPSDPLALAGQRLNWLEQRQKVLAQNIANANTPGFQPRDLQAFEQVLERAGANAPLARTD 63
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ + + V E GN V + + K + L L +
Sbjct: 64 ARHIPARNEMQGRPDRKVSER--------SPDGNAVSLEEQALKVAATDQAHALAVNLHR 115
Query: 119 KLNSMVMHVV 128
+ +M +
Sbjct: 116 RWTAMFQSAL 125
>gi|74317655|ref|YP_315395.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
ATCC 25259]
gi|74057150|gb|AAZ97590.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
ATCC 25259]
Length = 133
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+Q +RQ++++ NIANA TP+Y+A+D+ F+T L +T T L +
Sbjct: 8 MLNFHTQALRVRDQRQQVLASNIANADTPHYKARDL-DFKTALQGALQGTQTGGTALATT 66
Query: 66 DSSGLHWNAHVIEAPL--DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
L A +A L V GNTV + E YE N + +
Sbjct: 67 APGHLAGKAGGSDAGLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRLNQQIKG 126
Query: 124 VMHVVRG 130
++ ++G
Sbjct: 127 LLAAIQG 133
>gi|307546971|ref|YP_003899450.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM 2581]
gi|307218995|emb|CBV44265.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM 2581]
Length = 137
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + ERQ++++ NIANA TP Y+A+D+ F + L Q + L
Sbjct: 9 FNFQQQALSLRHERQQVLASNIANADTPGYKARDM-DFSSALEQAMQRGGGNAEGLALER 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H P + + GNTV + E + Y+ I +
Sbjct: 68 TSARHLAGQASTLPRSELLYRVPDQPSLDGNTVDMDRERAQFADNSVRYQAALTFIGRRV 127
Query: 122 SMVMHVVR 129
+ ++
Sbjct: 128 QGLKSAMQ 135
>gi|117623259|ref|YP_852172.1| flagellar basal body rod protein FlgB [Escherichia coli APEC O1]
gi|115512383|gb|ABJ00458.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli APEC
O1]
gi|323953241|gb|EGB49107.1| flagellar basal-body rod protein FlgB [Escherichia coli H252]
Length = 138
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A E + GNTV + E + Y+++ +
Sbjct: 68 TSTKHIPAQALTPLSAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|85060038|ref|YP_455740.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
gi|84780558|dbj|BAE75335.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
Length = 130
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+ + N ++RQ I++ NI NA TP Y+A+DI F T L++ R L +
Sbjct: 1 MMRFQQEALNLRAQRQSIIAANIVNADTPGYQARDI-DFSTELSKALTQGRASGETLALT 59
Query: 66 DSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+S H P + + GNTV + E Y+ L+
Sbjct: 60 TTSAAHIAGASKIEPTTELLYRIPDQPAMDGNTVNMDRERTAFADNSLQYQTGLTLLGGQ 119
Query: 121 NSMVMHVVRG 130
+ V++G
Sbjct: 120 IKGMNSVLQG 129
>gi|170748653|ref|YP_001754913.1| flagellar basal body rod protein FlgB [Methylobacterium
radiotolerans JCM 2831]
gi|170655175|gb|ACB24230.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
Length = 133
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + + W RQ +++EN+ANA P ++ +D+ E ++ T +
Sbjct: 3 LTDLPVLSMLRTRMQWAQARQGVIAENVANADMPGFKPRDLV--EPRFDRATGALATTGS 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTG--VQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
L + + + + A + G ++ SGN V + +E+ K+G + Y+L L +
Sbjct: 61 SLTLTSAGHMAPPGQSVGADSKRAKGFEIRPSGNGVNLEDEMMKAGENQSDYQLAASLYQ 120
Query: 119 KLNSMVMHVV 128
+ + +
Sbjct: 121 HSLTTLKIAI 130
>gi|156934443|ref|YP_001438359.1| flagellar basal body rod protein FlgB [Cronobacter sakazakii ATCC
BAA-894]
gi|260597442|ref|YP_003210013.1| flagellar basal body rod protein FlgB [Cronobacter turicensis
z3032]
gi|156532697|gb|ABU77523.1| hypothetical protein ESA_02274 [Cronobacter sakazakii ATCC BAA-894]
gi|260216619|emb|CBA29911.1| Flagellar basal-body rod protein flgB [Cronobacter turicensis
z3032]
Length = 137
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEAINLRAQRQEILAANIANADTPGYQARDI-DFASQLKKVMDQGRASGSTMTLAM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + GNTV + E + Y+ + +++
Sbjct: 68 TSSRHIPAQASTGASLDLLYRVPDQPSMDGNTVDMDRERTQFADNSLKYQTDLQVLGGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMSVLQ 135
>gi|82777312|ref|YP_403661.1| flagellar basal body rod protein FlgB [Shigella dysenteriae Sd197]
gi|81241460|gb|ABB62170.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
Sd197]
Length = 138
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA TP Y+ +DI F + L + R + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTPGYQVRDI-DFASELKKVMQRGRDATSVVALMM 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + P + + GNTV + E + Y+++ +
Sbjct: 68 TSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQI 127
Query: 122 SMVMHVVR 129
+M+V++
Sbjct: 128 KGMMNVLQ 135
>gi|149203130|ref|ZP_01880101.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035]
gi|149143676|gb|EDM31712.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035]
Length = 129
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
+ + F++A A RQ +VS+N+ANA TP Y A+DI+ F + + + T
Sbjct: 2 FEKMEVFRMAHALAQHAGARQALVSQNMANADTPGYAARDIADFAVVYASDDGGQMPRAT 61
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ H D+ +GN+V + E+ ++ +K ++ +
Sbjct: 62 RGGHMLG------HETRLDFAVAKDRDAVADPNGNSVTLETEMLRAVDVKRQHDRALAIY 115
Query: 118 KKLNSMVMHVV 128
K +++ +
Sbjct: 116 KSSLTVLRAAI 126
>gi|188581885|ref|YP_001925330.1| flagellar basal body rod protein FlgB [Methylobacterium populi
BJ001]
gi|179345383|gb|ACB80795.1| putative flagellar basal-body rod protein [Methylobacterium populi
BJ001]
Length = 138
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 15/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFET----------ILNQ 50
+ + + +W RQ +++EN+ANA +R +D++
Sbjct: 3 LTDLPLLGMLRTRMHWHQARQALLAENVANADMAGFRPRDLAEPSAATVGLAAPVGAAVG 62
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ART H+ + S+G + + + V+ SGN V + E+ K+G + Y
Sbjct: 63 GDGIARTDAAHIGLTASAGPNADPRRFKG-----FEVRPSGNGVNLEEEMMKAGDNQSDY 117
Query: 111 ELNTKLIKKLNSMVMHVV 128
+L L +K + V
Sbjct: 118 QLVASLYQKSLDALKIAV 135
>gi|295690699|ref|YP_003594392.1| flagellar basal-body rod protein Flgb [Caulobacter segnis ATCC
21756]
gi|295432602|gb|ADG11774.1| flagellar basal-body rod protein FlgB [Caulobacter segnis ATCC
21756]
Length = 150
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 12/140 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----------QN 51
I F + +L+ERQ++V++N+ANA T YR +D+ F + +
Sbjct: 7 DDIPLFGMLKSRLGYLTERQRLVAQNVANADTAGYRPQDLKQFSFQASLMNQTSGAVYRG 66
Query: 52 FLMARTHETHLKESDSSGLHW--NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ A T+ + + +S L A + + GN V + +++ K + +
Sbjct: 67 GVAAPTNGVRMIATSASHLAPSNAPSAWRATAGADSETTLDGNAVSLEDQMIKMTNARMN 126
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ +K +M+ R
Sbjct: 127 YDAAISFYQKSMTMLRMAAR 146
>gi|91776306|ref|YP_546062.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
KT]
gi|91710293|gb|ABE50221.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
KT]
Length = 131
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISS---FETILNQNFLMARTHETHLK 63
+RQ++++ NIANA TP Y+A+DI+ F+ L + TH
Sbjct: 8 LNFHQTALRVRGQRQELLAANIANADTPGYKARDINFADTFKQALTGASGGLKADTTHPG 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ H N + + V GNTV + E + YE + +I
Sbjct: 68 HIPATASHQNGVLYRS----IIQGSVDGNTVDMDVERTQFADNALRYEASATMISGQIKK 123
Query: 124 VMHVVRG 130
++ ++G
Sbjct: 124 LLSAIQG 130
>gi|197285513|ref|YP_002151385.1| flagellar basal body rod protein FlgB [Proteus mirabilis HI4320]
gi|227356004|ref|ZP_03840396.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
gi|194683000|emb|CAR43449.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
gi|227163992|gb|EEI48894.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
Length = 137
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 6/130 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F + + ++RQ+I++ NIANA TP ++A+DI F L + RT L+
Sbjct: 7 NTFHFQQEALSLRNKRQEILAANIANADTPGFQARDI-DFAAELKKTMENGRTGSHGLQL 65
Query: 65 SDSSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ +S H + + GNTV + E Y+ + I
Sbjct: 66 TMTSERHIPIKPGYRLEADLLYRVPHQTSMDGNTVDMDMERSNFADNSVKYQADVTFINS 125
Query: 120 LNSMVMHVVR 129
+M V++
Sbjct: 126 QVKSMMAVLQ 135
>gi|16125205|ref|NP_419769.1| flagellar basal body rod protein FlgB [Caulobacter crescentus CB15]
gi|13422229|gb|AAK22937.1| flagellar basal-body rod protein FlgB, putative [Caulobacter
crescentus CB15]
Length = 137
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 12/133 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----------QNFLMARTH 58
+ +L+ERQK+V++N+AN+ TP YR D+ F + + A T
Sbjct: 1 MLKSRLGYLTERQKLVAQNVANSDTPGYRPSDLKPFSFQASLMNNAAGPVYRGGRAAPTS 60
Query: 59 ETHLKESDSS--GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + +S G A + + GN V + +++ K + Y+
Sbjct: 61 GVTMIATTTSHMGRPNAPSAWRATAGADSETTLDGNAVSLEDQMLKMTDARMNYDAAISF 120
Query: 117 IKKLNSMVMHVVR 129
+K +M+ R
Sbjct: 121 YQKSMTMLRMAAR 133
>gi|114570488|ref|YP_757168.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
gi|114340950|gb|ABI66230.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
Length = 150
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILNQNF-----LM 54
+ + Q ++ S+RQ++++ENIANA+TP Y +DI S F L
Sbjct: 4 DDVPVLALLRQSMSFHSDRQQVIAENIANANTPGYTPRDIDESEFHAALRAQMGGNAGGA 63
Query: 55 ARTHETHLKESDSSGLHWNAHVI--------EAPLDQTTGVQVSGNTVGITNELYKSGHI 106
++ L + ++ H A E + V+GN+V I ++ ++
Sbjct: 64 GGSNRGALNLTTTAAGHIPASSTGGGSSSNWETSERPDSETTVNGNSVVIEEQMVRAQEN 123
Query: 107 KYLYELNTKLIKKLNSMVMHVVR 129
+ YE L +K ++ +R
Sbjct: 124 RMRYESALTLYQKSIGLLRTAIR 146
>gi|260574406|ref|ZP_05842410.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
gi|259023302|gb|EEW26594.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
Length = 126
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHE 59
+ + ++A A RQ++++ N+ANA TP ++A+D+ F M T
Sbjct: 2 FEKLDVVRMAQAMAAHAGARQEVIARNVANADTPGFKAQDLPDFAETYQAGEGAMRATRP 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ D + L P +GNTV + +E+ K+ ++ +++ + +
Sbjct: 62 GHITAPDLASL-------PVPRTANGSASPNGNTVSLESEMVKAVEVRQQHDMALAIYRN 114
Query: 120 LNSMVMHVV 128
+ ++ +
Sbjct: 115 SSDILRTSL 123
>gi|226327749|ref|ZP_03803267.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
gi|225203453|gb|EEG85807.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
Length = 136
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F + + ++RQ+I++ NIANA TP ++A+DI F + L + RT ++
Sbjct: 7 NTFHFQQEALSIRNKRQEILAANIANADTPGFQARDI-DFASELKKTIENGRTGSHGMQL 65
Query: 65 SDSSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ +S H + + GNTV + E Y+ + I
Sbjct: 66 AMTSERHIPIKPGYRLEADLLYRVPHQTAMDGNTVDMDMERSNFADNSLKYQADVTFINS 125
Query: 120 LNSMVMHVVR 129
+M V++
Sbjct: 126 QVKSMMAVLQ 135
>gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC3088]
gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC3088]
Length = 124
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ F + Q S+R +++++NIANA TP ++A+D+ F+ +L TH +
Sbjct: 3 SIFGVHEQALVLKSQRLQVLAKNIANADTPGFKARDV-DFKQVLAAQAGFGSLVTTHKRH 61
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
++ + + V P + + GNTV I+ E K G Y + + +++ S +
Sbjct: 62 LKTALSNQDGLVYTNPYNA----GLDGNTVEISAEQAKYGEAAIEYRASLEFLQRRISGI 117
Query: 125 MHVVRG 130
++G
Sbjct: 118 KRALKG 123
>gi|261419416|ref|YP_003253098.1| flagellar basal body rod protein FlgB [Geobacillus sp. Y412MC61]
gi|319766231|ref|YP_004131732.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
gi|261375873|gb|ACX78616.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC61]
gi|317111097|gb|ADU93589.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
Length = 129
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESDS 67
Q + + RQ+ +++NIANA TP Y+AKD+ F++ L + F + RT+ H +
Sbjct: 11 LEQGLRYAALRQQAIADNIANADTPGYKAKDVR-FQSELERAFRLEAKRTNPKHFSFPNE 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
D T +GN+V I E+ K + Y + + + + V
Sbjct: 70 QNGKIIVTT-----DTTVSYNHNGNSVDIDQEMSKLAENQIYYNALIERLNGKFTTLKTV 124
Query: 128 VRG 130
++G
Sbjct: 125 IKG 127
>gi|167645331|ref|YP_001682994.1| flagellar basal body rod protein FlgB [Caulobacter sp. K31]
gi|167347761|gb|ABZ70496.1| flagellar basal-body rod protein FlgB, putative [Caulobacter sp.
K31]
Length = 139
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 26/141 (18%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETILNQ---------------- 50
+ +LS+RQK++++N+ANA TP Y+ +D+ + F+ L+Q
Sbjct: 1 MLKSRMGYLSDRQKVIAQNVANADTPEYQPRDLKAYTFKATLDQQTTGQPYRGGPVSPTA 60
Query: 51 --NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
M T +H+ + A AP + + GN+V + +++ K +
Sbjct: 61 TNGVQMMATSASHMAPAR------PASAWRAPEGPDSETTLDGNSVTLEDQMLKMTDARM 114
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
Y+ +K +++ R
Sbjct: 115 NYDAAVSFYQKSMALLKTSTR 135
>gi|291613035|ref|YP_003523192.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus
ES-1]
gi|291583147|gb|ADE10805.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus
ES-1]
Length = 134
Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 12/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMART 57
Q N + RQ++++ NIANA TPNY+AKDI F + L + +A T
Sbjct: 7 QMLQFQQTALNLRAARQELIASNIANADTPNYKAKDI-DFASALQGALSGSGEKLQVAVT 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL + + + PL GNTV + E + YE + K I
Sbjct: 66 SPLHLAGTTGESVMGAPVLYRKPL----QPSADGNTVDMDVERAQFADNALRYEASVKFI 121
Query: 118 KKLNSMVMHVVRG 130
V+ ++G
Sbjct: 122 SDDVKDVLSALQG 134
>gi|188991644|ref|YP_001903654.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
campestris str. B100]
gi|167733404|emb|CAP51605.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 224
Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F I +R K+++ N++N TP Y+AKD+ +FE L LM T
Sbjct: 98 SFLGIHGDALTLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKAAEGVRDGGLMQATD 156
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + ++GL+ EA + GNTV E G Y + ++
Sbjct: 157 AKHYEIGSTAGLNPFQITREA-----DQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 211
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 212 SKVRSMLTAITG 223
>gi|56419751|ref|YP_147069.1| flagellar basal body rod protein FlgB [Geobacillus kaustophilus
HTA426]
gi|297530609|ref|YP_003671884.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
gi|56379593|dbj|BAD75501.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
gi|297253861|gb|ADI27307.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
Length = 129
Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESDS 67
Q + + RQ+ +++NIANA TP Y+AKD+ F+ L + F + RT+ H +
Sbjct: 11 LEQGLRYAALRQQAIADNIANADTPGYKAKDVR-FQAELERAFRLEAKRTNPKHFSFPNE 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
D T +GN+V I E+ K + Y + + + + V
Sbjct: 70 QNGKIIVTT-----DTTVSYNHNGNSVDIDQEMSKLAENQIYYNALIERLNGKFTTLKTV 124
Query: 128 VRG 130
++G
Sbjct: 125 IKG 127
>gi|268589985|ref|ZP_06124206.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM
1131]
gi|291314704|gb|EFE55157.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM
1131]
Length = 137
Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + RQ +++ NIANA TP Y+A+DI F L Q + +
Sbjct: 9 FAFQQQALSIREARQTVLASNIANADTPGYQARDI-DFNRQLQQAMDKGVVGGKGVTLAV 67
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H +AP + GNTV + E + Y+ + I
Sbjct: 68 TSKGHIEGRGGKAPNIDLKYRVPYQTSMDGNTVDMDIERSQFADNTLKYQADLTFINSRV 127
Query: 122 SMVMHVVR 129
++ V++
Sbjct: 128 KSMLAVLQ 135
>gi|90415321|ref|ZP_01223255.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2207]
gi|90332644|gb|EAS47814.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2207]
Length = 128
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLK 63
F I + + ++R +++S+NIANA TP ++A+DI F+ +LN Q + TH H+
Sbjct: 9 FGIHEKALDLRAKRMEVLSQNIANADTPGFKARDI-DFKNVLNNVQQAGSIRTTHAAHVS 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ S+G V G V GNTV I+ E K G Y+ + I+ +
Sbjct: 68 QASSAGADMVYTV-------PFGTSVDGNTVDISVEHAKYGKAAAEYQATLRFIEGNIAG 120
Query: 124 VMHVVRG 130
V +RG
Sbjct: 121 VRKALRG 127
>gi|85058008|ref|YP_453710.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
gi|84778528|dbj|BAE73305.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
'morsitans']
Length = 137
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 6/125 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
N L+ RQ +++ NIANA TP Y+A+DI F L + + +L S +S
Sbjct: 11 FQQAALNILNRRQDVLAANIANADTPGYQARDI-PFTRELRRAIEQGQQRSNNLSLSLTS 69
Query: 69 GLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
H A + GNTV + E Y+ + I
Sbjct: 70 RQHIPAEGVAHADHSLLYRIPDQPSADGNTVDMDRERVNFADNGMKYQASLSFINGQIKS 129
Query: 124 VMHVV 128
+M V+
Sbjct: 130 MMSVL 134
>gi|325927872|ref|ZP_08189096.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
91-118]
gi|325541712|gb|EGD13230.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
91-118]
Length = 179
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F + +R K+++ N++N TP Y+AKD+ +FE L L+ T
Sbjct: 53 SFLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLLQTTD 111
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + +GL+ EA + GNTV E G Y + ++
Sbjct: 112 AKHYEVGGGAGLNPFQFTREA-----DQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 166
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 167 SKVRSMLTAITG 178
>gi|163785675|ref|ZP_02180209.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879056|gb|EDP73026.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
Length = 125
Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
S+ A++ ER KI+ NIANA TPNY+ KD+ FE +LN+N + + HL
Sbjct: 8 LDKISETASYFLERTKIIQSNIANADTPNYKPKDLV-FEKVLNENIQLKKDDPRHLSP-- 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ + ++ + N V + +EL K +Y+ +++KK + +
Sbjct: 65 ----DTKLEIKKYIVEDSYYSGYDKNKVDVEHELAKLSESSIMYKTLLEVMKKDLGKLKY 120
Query: 127 VVRG 130
+ G
Sbjct: 121 AISG 124
>gi|325921021|ref|ZP_08182903.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
19865]
gi|325548503|gb|EGD19475.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
19865]
Length = 182
Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F I +R K+++ N++N TP Y+AKD+ FE L LM T
Sbjct: 56 SFLGIHGDALPLREQRMKLIASNLSNVDTPGYKAKDM-DFEAALKSAEGVRDGSLMQTTD 114
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + +S GL+ E + + GNTV E G Y + ++
Sbjct: 115 AKHYEIGNSGGLNPFQITRE-----SDQPSLDGNTVDADAERAAYGRAALEYRASLSFLE 169
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 170 SKVRSMLTAITG 181
>gi|33596137|ref|NP_883780.1| flagellar basal body rod protein FlgB [Bordetella parapertussis
12822]
gi|33601538|ref|NP_889098.1| flagellar basal body rod protein FlgB [Bordetella bronchiseptica
RB50]
gi|33573140|emb|CAE36787.1| flagellar basal-body rod protein FlgB [Bordetella parapertussis]
gi|33575974|emb|CAE33053.1| flagellar basal-body rod protein FlgB [Bordetella bronchiseptica
RB50]
Length = 135
Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q ++RQ+++S NIANA TPNY+A+D F+ + R +
Sbjct: 9 FRFFQQSIALRAQRQEVLSSNIANADTPNYKARDF-DFKAAMQGALE-QRMRLPDTNLAL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H + + GNTV + +E + Y+ + +++
Sbjct: 67 TSARHIPGQATTPSPAELMYRLPYQPSLDGNTVDMDSERVRFADNTLHYQSSLQVLSGRI 126
Query: 122 SMVMHVVR 129
+M ++
Sbjct: 127 RSLMSAIQ 134
>gi|332284016|ref|YP_004415927.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7]
gi|330427969|gb|AEC19303.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7]
Length = 137
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART-HETHLKES 65
+RQ++++ NIANA TPNY+A+D F LNQ + H + +
Sbjct: 9 LGFYQTALALRQKRQEVLAANIANADTPNYKARDF-DFTAALNQAMDGGGSMHLPDTQLA 67
Query: 66 DSSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+S H A + Q + GNTV + E Y+ + +I
Sbjct: 68 LTSARHIPAKAVTPDPAPLLYRQPLQPSMDGNTVDMDVERVAFADNTANYQTDLTIISAR 127
Query: 121 NSMVMHVVR 129
+M ++
Sbjct: 128 IKGIMAALQ 136
>gi|206890640|ref|YP_002248112.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742578|gb|ACI21635.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 111
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+I + + + RQKI++ NIANA TPNY+AKDI +F+ L +
Sbjct: 6 KILEKVMDICTYRQKILASNIANADTPNYKAKDI-NFQEELKKAAE-------------- 50
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ VIEAP TT GNTV I E+ K +Y T+L M+
Sbjct: 51 -SHNAEYKVIEAP---TTMPNRDGNTVNIEVEMTKLAETMLMYNGATQLFSTRIRMLKDA 106
Query: 128 VRG 130
++G
Sbjct: 107 IKG 109
>gi|238782789|ref|ZP_04626818.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
gi|238716212|gb|EEQ08195.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
43970]
Length = 135
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 46/129 (35%), Gaps = 6/129 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F+ L++RQ I++ NIAN TP Y A+DI F L + + L
Sbjct: 7 NAFRFQQDALRLLTQRQDILASNIANVDTPGYLARDI-DFSQQLKTAVDRSAPEKGSLSL 65
Query: 65 SDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+SG H Q GNTV + E Y+ + ++
Sbjct: 66 GLTSGAHIAGMKSRMNDSQLLYRIPDQPSADGNTVDMDRERINFADNSMKYQSSLTILST 125
Query: 120 LNSMVMHVV 128
+M V+
Sbjct: 126 QIKSMMAVI 134
>gi|212709489|ref|ZP_03317617.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens DSM
30120]
gi|212687827|gb|EEB47355.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens DSM
30120]
Length = 137
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + RQ +++ NIANA TP Y+A+DI F L Q + +
Sbjct: 9 FAFQQRALSIREARQTVLASNIANADTPGYQARDI-DFNRQLQQAMDKGVVKGKGISLAV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H H ++ + GNTV + E + Y+ + I
Sbjct: 68 TAKGHIEGHDMKPAALDLKYRVPYQTSMDGNTVDMDVERSQFADNTLKYQADLTFINSQV 127
Query: 122 SMVMHVVR 129
++ V++
Sbjct: 128 KSMLAVLQ 135
>gi|163856432|ref|YP_001630730.1| flagellar basal body rod protein FlgB [Bordetella petrii DSM 12804]
gi|163260160|emb|CAP42462.1| flagellar basal-body rod protein FlgB [Bordetella petrii]
Length = 135
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q +ERQ+++S NIANA TPNY+A+D F+ + R + +
Sbjct: 9 FRFYQQAIALRAERQEVLSSNIANADTPNYKARDF-DFQAAMRNALD-TRMRLPDTQLAL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + + + GNTV + E + Y+ + +++
Sbjct: 67 TSARHIPAKAVTPDPAELLYRLPYQPSIDGNTVDMDAERVQFADNTLHYQSSLQMLSSRI 126
Query: 122 SMVMHVVR 129
+M ++
Sbjct: 127 RSMMSAIQ 134
>gi|148256780|ref|YP_001241365.1| flagellar basal body rod protein FlgB [Bradyrhizobium sp. BTAi1]
gi|146408953|gb|ABQ37459.1| Putative flagellar basal-body rod protein flgB (putative proximal
rod protein) [Bradyrhizobium sp. BTAi1]
Length = 135
Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILNQN-----FL 53
+ + W ERQ++++EN++N+ TPN++ KD+ F+
Sbjct: 3 INDLPVLSALRTKMQWHQERQRVLAENVSNSDTPNFKPKDLVEPKFDATGQAVGGFAPLS 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ART H+ + ++ + L + GN V + E+ K + Y
Sbjct: 63 LARTSTAHIAPASGESASFDQNRKVGFLTRPA-----GNAVSLEEEMLKVSANQMDYAAA 117
Query: 114 TKLIKKLNSMVMHVV 128
T L K ++ +
Sbjct: 118 TSLYGKSLRLLKTAI 132
>gi|33592476|ref|NP_880120.1| flagellar basal body rod protein FlgB [Bordetella pertussis Tohama
I]
gi|33572122|emb|CAE41664.1| flagellar basal-body rod protein FlgB [Bordetella pertussis Tohama
I]
gi|332381893|gb|AEE66740.1| flagellar basal body rod protein FlgB [Bordetella pertussis CS]
Length = 135
Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q ++RQ+++S NIANA TPNY+A+D F+ + R +
Sbjct: 9 FRFFQQSIALRAQRQEVLSSNIANADTPNYKARDF-DFKAAMQGALE-QRMRLPDTNLAL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
S H + + GNTV + +E + Y+ + +++
Sbjct: 67 ISARHIPGQATTPSPAELMYRLPYQPSLDGNTVDMDSERVRFADNTLHYQSSLQVLSGRI 126
Query: 122 SMVMHVVR 129
+M ++
Sbjct: 127 RSLMSAIQ 134
>gi|297538893|ref|YP_003674662.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301]
gi|297258240|gb|ADI30085.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301]
Length = 140
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--------LMARTH 58
+RQ++++ NIANA TPN++A+DI F+ + A+T
Sbjct: 9 LSFHQNALRVRGQRQELIAANIANADTPNFKARDI-DFKAAMQSAVAGINKDAFQTAKTS 67
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL S +S + +A E V GNTV + E + YE + LI
Sbjct: 68 PLHLDGSRASNSNTSAAPGEPLFRPIIQGSVDGNTVDMDVERNQFADNGIRYEASLTLIN 127
Query: 119 KLNSMVMHVVR 129
++ ++
Sbjct: 128 AQLKQMLAALQ 138
>gi|302872574|ref|YP_003841210.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
obsidiansis OB47]
gi|302575433|gb|ADL43224.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
obsidiansis OB47]
Length = 133
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + + +W +R +I+S NIANA TP Y+AKD+ +FE L + + +
Sbjct: 2 INMFDKIDLYKKALDWAWKRNEIISNNIANADTPGYKAKDL-NFEAFLQRSFNQEESLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T+E H+KES SS + LD + +++ NTV I E+ K ++ +
Sbjct: 61 VTTNERHIKESSSSPDNSI-----EVLDSSFQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 115
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 116 LQLSREINKWKMVIK 130
>gi|88811798|ref|ZP_01127052.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
gi|88791189|gb|EAR22302.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
Length = 131
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETH 61
F + +Q ++R ++++ NIANA TP+Y+A+D F +L+Q N + TH H
Sbjct: 8 VFGLPAQALELRAKRTQLLASNIANADTPHYKARDF-DFSNVLHQARADNATVRTTHAHH 66
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ S + + GNTV + E + Y+ + +
Sbjct: 67 IRPGGLSVGNSTIQ-----YRVPANPSLDGNTVELDRERARFSQNTLEYQAALQFLGGRI 121
Query: 122 SMVMHVVRG 130
++ ++G
Sbjct: 122 RSLLGAIKG 130
>gi|183598614|ref|ZP_02960107.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC 25827]
gi|188020793|gb|EDU58833.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC 25827]
Length = 137
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F Q + RQ I++ NIANA TP Y+A+DI F L Q + +
Sbjct: 9 FAFQQQALSIREARQTILAANIANADTPGYQARDI-DFSRQLQQAMKNGVVKGKGVALAV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H ++ P + GNTV + E + Y+ + I
Sbjct: 68 TSKGHIEGRNMKQPELDLKYRVPYQTSMDGNTVDMDIERSQFADNTLKYQADLTFINSRV 127
Query: 122 SMVMHVVR 129
++ V++
Sbjct: 128 KSMLAVLQ 135
>gi|159045787|ref|YP_001534581.1| flagellar basal body rod protein FlgB [Dinoroseobacter shibae DFL
12]
gi|157913547|gb|ABV94980.1| flagellar basal-body rod protein FlgB [Dinoroseobacter shibae DFL
12]
Length = 126
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMARTH 58
M+ +T AS +ER +++ NIA+A TP YR +D+ F + + + T
Sbjct: 1 MKNLTILNTASAMVAHANERHGVIARNIAHADTPGYRTQDLKDFTDSYREMTSSGLRATR 60
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ H + V++ P V +GN+V + +E+ + ++ +EL + K
Sbjct: 61 DDHAFGAHRGLDLSVQTVLDTP------VAPNGNSVSLEHEMIRMAENRHQHELALSVYK 114
Query: 119 KLNSMVMHVV 128
S++ +
Sbjct: 115 TSMSILRTSL 124
>gi|229544390|ref|ZP_04433448.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
gi|229324875|gb|EEN90552.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
Length = 129
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETH 61
+ + S RQK++S NIANA TPNY+A+D+ SF+ +L + RT H
Sbjct: 6 NTLRSLEHALQYASLRQKVISNNIANADTPNYKAQDV-SFKNVLEDSVNAISATRTDPRH 64
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S E + T +GN+V I E+ + YE +L K
Sbjct: 65 FRFSAGDSSS------EIVTESGTTYNSNGNSVDIDTEMANLASNQIYYESLIELEKGKL 118
Query: 122 SMVMHVVRG 130
S +++VVRG
Sbjct: 119 SSLLNVVRG 127
>gi|30248319|ref|NP_840389.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
gi|30138205|emb|CAD84213.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
Length = 137
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 13/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--------QNFLMAR 56
+ + RQ+++S NIANA TP ++A+D F + Q+ +A
Sbjct: 7 NLVGFNQRALGLRATRQELLSGNIANADTPGFKARDF-DFAKAMQNVQSPQRVQHSSLAT 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T H+ +D + P + GNTV + E + Y+
Sbjct: 66 TAPGHIGMADFRSITSVPKQYRVPQQPSI----DGNTVDMDTERMQFMDNAMRYDAGLTF 121
Query: 117 IKKLNSMVMHVVR 129
I ++ ++
Sbjct: 122 ISGQFRTLLSAIK 134
>gi|329901227|ref|ZP_08272752.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
IMCC9480]
gi|327549159|gb|EGF33751.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
IMCC9480]
Length = 150
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 20/145 (13%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--------------- 49
+ + N +RQ++++ NIANA TPNY+A+DI F + +
Sbjct: 7 DYLRFNETALNLRGQRQQLIASNIANADTPNYKARDI-DFNSAMKSALARSGTATGATMA 65
Query: 50 ----QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
Q +ART THL G + + + V GNTV + E
Sbjct: 66 TAAVQPAELARTSTTHLSAKSGHGGNSGVNGVPLLYRNIQQGAVDGNTVDMDAERNAFAD 125
Query: 106 IKYLYELNTKLIKKLNSMVMHVVRG 130
YE +I ++ ++G
Sbjct: 126 NAIRYEAGITMISGQIKSMLSAIQG 150
>gi|261344145|ref|ZP_05971789.1| flagellar basal-body rod protein FlgB [Providencia rustigianii DSM
4541]
gi|282567738|gb|EFB73273.1| flagellar basal-body rod protein FlgB [Providencia rustigianii DSM
4541]
Length = 137
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + RQ +++ NIANA TP Y+A+DI F L Q + +
Sbjct: 9 FAFQQRALSIREARQTVLASNIANADTPGYQARDI-DFNRQLQQAMDKGVVKGKGISLAV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H H ++ + GNTV + E + Y+ + I
Sbjct: 68 TAKGHIEGHDMQPAAMDLKYRVPYQTSMDGNTVDMDIERSQFADNTLKYQADLTFINSQV 127
Query: 122 SMVMHVVR 129
++ V++
Sbjct: 128 KSMLAVLQ 135
>gi|209545548|ref|YP_002277777.1| putative flagellar basal-body rod protein FlgB [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533225|gb|ACI53162.1| putative flagellar basal-body rod protein FlgB [Gluconacetobacter
diazotrophicus PAl 5]
Length = 139
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
+A +WL R+ +++ N+ANA+TP Y KD++ F+ +L + M A+T H+
Sbjct: 16 DLLGLAKDRLHWLEARESVLAGNVANANTPGYVPKDMTPFQGVLQEQMGMTLAQTEPGHM 75
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S +P N V + EL K T + S
Sbjct: 76 AGQGGSARTDRTGGSASP---------DKNEVSLEAELEKVADTSDQQRFATNVYSLYMS 126
Query: 123 MVMHVV 128
M +
Sbjct: 127 MYSTAL 132
>gi|312126816|ref|YP_003991690.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
hydrothermalis 108]
gi|311776835|gb|ADQ06321.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
hydrothermalis 108]
Length = 132
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + + +W +R +I+S NIANA TP Y+AKD+ +FE L + +
Sbjct: 2 INMFDKIDLYKKALDWAWKRNEIISNNIANADTPGYKAKDL-NFEAYLQRSLNQEEGLQL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T+E H+KES S LD + +++ NTV I E+ K ++ +
Sbjct: 61 FTTNERHIKESSSPDNSIEV------LDSSLQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 114
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 115 LQLSREINKWKTVIK 129
>gi|253702511|ref|YP_003023700.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21]
gi|251777361|gb|ACT19942.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21]
Length = 139
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--HETHL 62
++ + + ++RQ +++ N+AN TP Y D+ SFE L T +H
Sbjct: 9 NTVELLGKSLDLRAKRQSVIASNLANVETPGYAPSDL-SFEGRLKDALKQGATPAAPSHP 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTG--VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ G + ++ L Q TG + GN V + +E+ + + +Y +L+ K
Sbjct: 68 RHIPLKGGSVSLDRVQGDLIQVTGSNMGPDGNGVELESEMGRMAENQIMYNATVQLLAKK 127
Query: 121 NSMVMHVVRG 130
+ +RG
Sbjct: 128 FEGLKQAIRG 137
>gi|27380925|ref|NP_772454.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
USDA 110]
gi|27354091|dbj|BAC51079.1| flgB [Bradyrhizobium japonicum USDA 110]
Length = 134
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + W ERQ+++SEN++N+ TP +R +D+ E L++ + +
Sbjct: 3 INDLPVLSALRTKMQWHQERQRVLSENVSNSDTPKFRPRDLV--EPKLDRAGAVTGSMGP 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
L + +S H + DQ + +GN V + E+ K+ + Y T L
Sbjct: 61 -LAMTVTSASHMTPSGAASGFDQNRNAGFETRPAGNAVNLEEEMMKAASNQMDYAAATSL 119
Query: 117 IKKLNSMVMHVV 128
K ++ +
Sbjct: 120 YSKSLRLLKTAI 131
>gi|317406204|gb|EFV86453.1| flagellar basal-body rod protein [Achromobacter xylosoxidans C54]
Length = 135
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q ++RQ+++S NIANA TPNY+A+D F+ + ++ +
Sbjct: 9 FRFFQQSLGLRAQRQEVLSSNIANADTPNYKARDF-DFKAAMQNAMEGSK-RLPDTSLTL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + Q + GNTV + E + Y+ +L+
Sbjct: 67 TSARHIPAKAVSEGPTQMLYRLPYQPSMDGNTVDMDIERVQFADNTLHYQSTMQLLSGRI 126
Query: 122 SMVMHVVR 129
+M ++
Sbjct: 127 RTMMAAIQ 134
>gi|89069823|ref|ZP_01157158.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus
HTCC2516]
gi|89044624|gb|EAR50740.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus
HTCC2516]
Length = 122
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ Q ++ A S RQ +V+ NIANA TP YRA+ + F + +A+T
Sbjct: 2 FDKLDVMQTSAAMARHASARQVLVARNIANADTPGYRAQSLPPFREVAGTGRALAQTRAG 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H S + A +GN+V + ++ + ++ + + K
Sbjct: 62 HFGGSGRAPPGAAAAEP----------APNGNSVSLEQQMVAAAEVQREHSRALTVYKHA 111
Query: 121 NSMVMHVVRG 130
++ V G
Sbjct: 112 LDVLRLSVGG 121
>gi|146296277|ref|YP_001180048.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409853|gb|ABP66857.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 137
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLM 54
I F + ++ +R +++S NIANA TP Y+AKD+ +F+ L N +
Sbjct: 2 INMFDKIDFYKKALDYAWKRNEVISNNIANADTPGYKAKDL-NFKAFLQAYLNDQNNLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + H+K SSG IE LD + +++ NTV I E+ K ++ +
Sbjct: 61 ITTDKRHIKAEQSSGTSTKDSAIE-ILDSSFQMRLDENTVDIEQEMGKLLQNSLYFDGVS 119
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 120 LQLSREINKWKTVIK 134
>gi|312876493|ref|ZP_07736476.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796704|gb|EFR13050.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
lactoaceticus 6A]
Length = 133
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + + +W +R +I+S NIANA TP Y+AKD+ FE L + N +
Sbjct: 2 INMFDKIDLYKKALDWAWKRNEIISNNIANADTPGYKAKDL-DFEAFLQKSLNQEENLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T E H+KES SS + LD + +++ NTV I E+ K ++ +
Sbjct: 61 VTTDERHIKESSSSQDNSI-----EVLDSSLQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 115
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 116 LQLSREINKWKTVIK 130
>gi|114762159|ref|ZP_01441627.1| hypothetical protein 1100011001331_R2601_14510 [Pelagibaca
bermudensis HTCC2601]
gi|114545183|gb|EAU48186.1| hypothetical protein R2601_14510 [Roseovarius sp. HTCC2601]
Length = 125
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-THE 59
Q + FQ A A RQ + ++NIANA TP Y A DI FE L + R T +
Sbjct: 2 FQNLNVFQTAMALAKHSGLRQALSAQNIANADTPGYHALDIPDFEATLRGSEGSQRATRD 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + P + V +GN+V I E+ + + + +
Sbjct: 62 KHLHG-------LRQDHLPEPTLRRASVDPNGNSVSIEGEMVTAVAASRGHGRALSIYRS 114
Query: 120 LNSMVMHVV 128
+++ +
Sbjct: 115 SLNILRTSL 123
>gi|319790423|ref|YP_004152056.1| flagellar basal-body rod protein FlgB [Thermovibrio ammonificans
HB-1]
gi|317114925|gb|ADU97415.1| flagellar basal-body rod protein FlgB [Thermovibrio ammonificans
HB-1]
Length = 124
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + AN+ +R ++ NIANA TP YR +D+ FE L + RT H+ ++
Sbjct: 8 LKSLEEGANYFYQRAVVIQGNIANADTPFYRPRDLV-FEQELQNQLHLKRTSPKHMDPTE 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S E L+ TG GN V +T EL K + +L + IKK +
Sbjct: 67 PS-----RPFKEVVLNDVTGY--DGNKVNVTKELAKLAETALMTKLLDEAIKKEIGKLKL 119
Query: 127 VVRG 130
+ G
Sbjct: 120 AITG 123
>gi|300311349|ref|YP_003775441.1| Flagellar basal-body rod protein FlgB [Herbaspirillum seropedicae
SmR1]
gi|300074134|gb|ADJ63533.1| Flagellar basal-body rod FlgB protein [Herbaspirillum seropedicae
SmR1]
Length = 142
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN----------FLM 54
FF+ N ++RQ++++ NIANA TPNY+A+D+ +F L +
Sbjct: 7 DFFRFNEMAMNLRAQRQQVLASNIANADTPNYKARDV-NFADALKNALDNKATAMPPLEL 65
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
ART TH+ + + T V GNTV + E + YE
Sbjct: 66 ARTAATHVPGTAPENGPGSIGGSPLLYRTVTQGSVDGNTVDLDVERNEFVDNGLRYEAGV 125
Query: 115 KLIKKLNSMVMHVVR 129
+ +++ ++
Sbjct: 126 TAVNGQIKAMLNAIQ 140
>gi|254487293|ref|ZP_05100498.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101]
gi|214044162|gb|EEB84800.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101]
Length = 115
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLKESDSSG 69
A +RQ I S+N+AN+ TP Y AKDI++FET+ + T HL S
Sbjct: 1 MAIHAGQRQAIASQNVANSDTPGYVAKDIAAFETLYQSSRDGTVQRATRTGHLNGSV--- 57
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ + P + +GN V + E+ +S K ++ + + K S++ +
Sbjct: 58 ---DGMQVTEPFEVRDEASPNGNAVSLETEMLRSLDAKRQHDRSLAIYKSALSVLRSTI 113
>gi|149182500|ref|ZP_01860973.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
gi|148849760|gb|EDL63937.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
Length = 129
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ Q N+ S +QK++S+NIAN TPNY+AK I SF+ LN++ T+ +
Sbjct: 6 STIQSLENGLNYSSAKQKVISQNIANVDTPNYKAKSI-SFKDQLNESISTFEAKRTNPRH 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSM 123
+ SG N + I++ Q +GN V I E+ + + L +L K NS
Sbjct: 65 FEFSGRGANGYYIKS---QPFQYNHNGNGVDIDKEMSDLASNQIYFNALTDRLNGKFNS- 120
Query: 124 VMHVVRG 130
+ V+RG
Sbjct: 121 LQSVIRG 127
>gi|146341895|ref|YP_001206943.1| flagellar basal body rod protein FlgB [Bradyrhizobium sp. ORS278]
gi|146194701|emb|CAL78726.1| Putative flagellar basal-body rod protein flgB (putative proximal
rod protein) [Bradyrhizobium sp. ORS278]
Length = 135
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILN-----QNFL 53
+ I W ERQ+++SEN++N+ TPN++ KD+ F++
Sbjct: 3 INDIPVLSALRTKMQWHQERQRVLSENVSNSDTPNFKPKDLVEPKFDSTGQSVGGFAPLS 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ RT H+ + ++ + + +GN V + E+ K + Y
Sbjct: 63 LTRTSAAHITPASGDSASFDQNRKIG-----FQTRPAGNAVSLEEEMLKVSANQMDYAAA 117
Query: 114 TKLIKKLNSMVMHVV 128
T L K ++ +
Sbjct: 118 TSLYGKSLHLLKTAI 132
>gi|254503455|ref|ZP_05115606.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
gi|222439526|gb|EEE46205.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
Length = 129
Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETH 61
+ FQ W RQ +++ENIAN+ +P + A+D+ SF+ + + T T
Sbjct: 1 MPLFQALKSKMQWHQTRQGVLAENIANSDSPEFEARDVKAYSFDDHIGREAFGLTTERTS 60
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ E + + SGN V + ++ K + ++ T L K
Sbjct: 61 VAHISGMIGSGIGGKAER--RDSFEITPSGNAVNLEEQMMKITQNQMDFQAATTLYTKGL 118
Query: 122 SMVMHVV 128
++ +
Sbjct: 119 GLIRTAL 125
>gi|312621565|ref|YP_004023178.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202032|gb|ADQ45359.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
kronotskyensis 2002]
Length = 133
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + + +W ER KI+S NIANA TP Y+AKD+ +FE L + + +
Sbjct: 2 INMFDKIDLYKKALDWAWERNKIISNNIANADTPGYKAKDL-NFEAFLQRSLDQEESLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T+E H+KES S N LD + +++ NTV I E+ K ++ +
Sbjct: 61 VTTNERHIKESSS-----NPDNSIEVLDSSLQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 115
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 116 LQLSREINKWKTVIK 130
>gi|253998491|ref|YP_003050554.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
gi|313200566|ref|YP_004039224.1| flagellar basal-body rod protein flgb [Methylovorus sp. MP688]
gi|253985170|gb|ACT50027.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
gi|312439882|gb|ADQ83988.1| flagellar basal-body rod protein FlgB [Methylovorus sp. MP688]
Length = 142
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++RQ++++ NIANA TPNY+A+DI +F LN T + L S
Sbjct: 8 LAFQQSALRVRAQRQELIAANIANADTPNYKARDI-NFNDALNNALSGNDTPGSGLDVSK 66
Query: 67 SSGLHWNAHVI-----------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+S H + E V GNTV + E + YE +
Sbjct: 67 TSSAHLSGDPTSVDYVPTGKPGEPMFRPLIQGSVDGNTVDMDVERNQFTDNAIRYEASLN 126
Query: 116 LIKKLNSMVMHVVRG 130
+I ++ ++G
Sbjct: 127 MINGQIKKLLSAIQG 141
>gi|296103614|ref|YP_003613760.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058073|gb|ADF62811.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 136
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q LS RQ I++ NIANA TP Y+A+DI F L ++ + S
Sbjct: 8 FRFQQQALGLLSRRQDILASNIANADTPGYKARDI-DFTQQLKAAMENNAMAKSPVSLSL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H Q GNTV + E Y+ +
Sbjct: 67 TSNKHIEGKARPFDDSQLLYRVPDQPSADGNTVDMDRERVNFADNAVKYQSGLTFLGADI 126
Query: 122 SMVMHVV 128
+M V+
Sbjct: 127 KKMMTVL 133
>gi|21231400|ref|NP_637317.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768547|ref|YP_243309.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113066|gb|AAM41241.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573879|gb|AAY49289.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 133
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F I +R K+++ N++N TP Y+AKD+ +FE L LM T
Sbjct: 7 SFLGIHGDALTLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKAAEGVRDGGLMQATD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + ++GL+ EA + GNTV E G Y + ++
Sbjct: 66 AKHYEIGSTAGLNPFQITREA-----DQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 120
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 121 SKVRSMLTAITG 132
>gi|294500942|ref|YP_003564642.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
B1551]
gi|294350879|gb|ADE71208.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
B1551]
Length = 129
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETH 61
T FQ ++ S++Q+ +++NIAN TPNY++K + S F +L+ +T H
Sbjct: 6 TTFQTIENGISYASQKQQTIAQNIANVDTPNYKSKTVSRTSEFRDLLHNELEAYQTDSKH 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKL 120
+ SDSS T Q +GN V + E+ + YE L +L K
Sbjct: 66 IPFSDSSQRAITQQG-------NTSYQANGNNVDMDKEMADMAENQIYYEALVDRLNGKF 118
Query: 121 NSMVMHVVRG 130
NS + V+RG
Sbjct: 119 NS-LQTVIRG 127
>gi|312135857|ref|YP_004003195.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
owensensis OL]
gi|311775908|gb|ADQ05395.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
owensensis OL]
Length = 133
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + ++ +W +R +I+S NIANA TP Y+AKD+ +FE L + + +
Sbjct: 2 INMFDKIDLYTKALDWAWKRNEIISNNIANADTPGYKAKDL-NFEAFLQRSFNQEESLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T+E H+KES S N LD + +++ NTV I E+ K ++ +
Sbjct: 61 VTTNERHIKESSS-----NPDNSIEVLDSSFQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 115
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 116 LQLSREINKWKTVIK 130
>gi|73539447|ref|YP_299814.1| flagellar basal body rod protein FlgB [Ralstonia eutropha JMP134]
gi|72122784|gb|AAZ64970.1| Flagellar basal-body rod protein FlgB [Ralstonia eutropha JMP134]
Length = 135
Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + ++RQ +++ NIA+A TP Y+A+D F + L Q R + S
Sbjct: 9 LRFQQEALSLRTQRQSVIASNIAHADTPGYKARDF-DFSSTLAQTMERGR-RPDGVSLST 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A V GNTV + E +E N ++
Sbjct: 67 TSVRHLPAQAPTRDDADLAYRIPLQSSVDGNTVEMDTERVAFADNSVHFESNLTVVSSKI 126
Query: 122 SMVMHVVR 129
++ ++
Sbjct: 127 KTMLAAIQ 134
>gi|253990130|ref|YP_003041486.1| flagellar basal body rod protein FlgB [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211639033|emb|CAR67647.1| flagellar basal-body rod protein flgb (putative proximal rod
protein) [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253781580|emb|CAQ84743.1| flagellar basal-body rod protein flgb (putative proximal rod
protein) [Photorhabdus asymbiotica]
Length = 137
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + S RQ+I+S NIANA TP Y+A+DI F L + R + +
Sbjct: 9 FHFQQEALSLRSRRQEILSANIANADTPGYQARDI-DFAAQLKKTIAHGRVTGNGIGLTL 67
Query: 67 SSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H ++ + GNTV + E Y+
Sbjct: 68 TSDRHIPIQPQKRMEMDLLYRVPYQPAMDGNTVDMDMERSNFMDNSLKYQAELTATSSQV 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMSVLQ 135
>gi|21672601|ref|NP_660668.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008459|sp|Q8K9K9|FLGB_BUCAP RecName: Full=Flagellar basal-body rod protein flgB
gi|21623232|gb|AAM67879.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 133
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMARTHE 59
N ++RQ+I+S NIANA TPNY+A DI +F+ +++ + + +T
Sbjct: 9 LDFNQNLLNLYAKRQEILSSNIANADTPNYKAMDI-NFKDEMDKITKKSNLDITLTKTSS 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + N + E + +Q +GNTV + E + YE N IK
Sbjct: 68 HHL-----NPRKKNFFIFEVKPITSKEIQSNGNTVDMNRERIEFIKNTLKYEENLVFIKN 122
Query: 120 LNSMVMHVVRG 130
+M+V++G
Sbjct: 123 EIKNIMNVLKG 133
>gi|82702450|ref|YP_412016.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
ATCC 25196]
gi|82410515|gb|ABB74624.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
ATCC 25196]
Length = 134
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHET 60
F+ AN + RQ++++ NIANA TP Y+A+DI +F+ + + ++ +
Sbjct: 9 FRFYEDAANLRAHRQQLIASNIANADTPQYKARDI-NFKDAMESALTGKRGVILVTSAPN 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ +G+ ++ V GNTV + E + YE N I
Sbjct: 68 HIASPTGAGVAAGQQLL---YRTAVQGSVDGNTVDMDVERNQFADNAVHYEANLTFISDQ 124
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 125 IRQMRTAIQG 134
>gi|126734102|ref|ZP_01749849.1| flagellar basal-body rod protein FlgB, putative [Roseobacter sp.
CCS2]
gi|126716968|gb|EBA13832.1| flagellar basal-body rod protein FlgB, putative [Roseobacter sp.
CCS2]
Length = 128
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--NQNFLMARTHE 59
+ FQ A A RQ +V+ NIANA TP+++A+ I+ F+ + N +M T
Sbjct: 3 NSLDLFQTAGAMARHAGTRQAVVARNIANADTPDFQAQAIAPFKDVYQDNGGAMMRATRP 62
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+H+ +D+ I +GNTV I +E+ S + + + +
Sbjct: 63 SHISGADA------QPNIRMQQATVGDPSPNGNTVSIEDEMLHSVDVAREHSRALMVYRH 116
Query: 120 LNSMVMHVV 128
+++ +
Sbjct: 117 AMTVLRTSL 125
>gi|295706288|ref|YP_003599363.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
gi|294803947|gb|ADF41013.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
Length = 129
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETH 61
T FQ ++ S++Q+ +++NIAN TPNY++K + S F +L+ +T H
Sbjct: 6 TTFQTIENGISYASQKQQTIAQNIANVDTPNYKSKTVTRTSEFRDLLHNELEAYQTDSKH 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKL 120
+ SDSS T Q +GN V + E+ + YE L +L K
Sbjct: 66 IPFSDSSQRVITQQG-------NTSYQANGNNVDMDKEMADMAENQIYYEALVDRLNGKF 118
Query: 121 NSMVMHVVRG 130
NS + V+RG
Sbjct: 119 NS-LQTVIRG 127
>gi|37525838|ref|NP_929182.1| flagellar basal body rod protein FlgB [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36785267|emb|CAE14208.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
protein) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 137
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + S RQ+I+S NIANA TP Y+A+DI F T L + R + +
Sbjct: 9 FHFQQEALSLRSRRQEILSANIANADTPGYQARDI-DFATQLKKTIAHGRVTGNGIGLTL 67
Query: 67 SSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H ++ + GNTV + E Y+
Sbjct: 68 TSDRHIPIQPQKRMEMDLLYRVPYQPAMDGNTVDMDMERSNFMDNSLKYQAELTATSSQV 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMAVLQ 135
>gi|192292777|ref|YP_001993382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
TIE-1]
gi|192286526|gb|ACF02907.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
TIE-1]
Length = 135
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + W ERQK+++ENI+N+ TPN+R +D+ E A
Sbjct: 3 INDLPELNALRTKMQWHQERQKVLAENISNSDTPNFRPRDLV--EPKFTPEGQAAGGPGG 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
L +S H + +GN V + +E+ K + Y T L
Sbjct: 61 SLPLMRTSASHLTPPGGSPSFSTNNNGGFQTRPAGNAVNLEDEMLKVSSNQMDYAAVTSL 120
Query: 117 IKKLNSMVMHVV 128
+ ++ +
Sbjct: 121 YSRSLGLLKTAI 132
>gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
Length = 135
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHET 60
+ + N+ RQ+I+S NIANA TP Y+AK + FE L + +
Sbjct: 8 LKALASSLNFRQMRQEIISSNIANAETPGYKAKRV-DFEQALARALDVDGQQQLNTEDSR 66
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + V E P V GNTV EL + K LY+ +LI K
Sbjct: 67 HFDVGSGGFGNLQPEVYEDP---NGIVSEDGNTVDRDAELARMAENKILYDATVQLINKK 123
Query: 121 NSMVMHVV 128
++ + V
Sbjct: 124 FGLMKYAV 131
>gi|289666044|ref|ZP_06487625.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670503|ref|ZP_06491578.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 133
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F + +R K+++ N++N TP Y+AKD+ +FE L LM T
Sbjct: 7 SFLGVHGDALALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + SGL+ E + + GNTV E G Y + ++
Sbjct: 66 AKHYEVGGGSGLNPFQITRE-----SDQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 120
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 121 SKVRSMLTAITG 132
>gi|197120202|ref|YP_002140629.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem]
gi|197089562|gb|ACH40833.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem]
Length = 139
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--HETHL 62
++ + + ++RQ +++ N+AN TP Y D+ SFE L T H
Sbjct: 9 NTVELLGKTLDLRAKRQSVIASNLANVETPGYTPSDL-SFEGRLKDALKQGATPTATPHP 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTG--VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ G + ++ L Q TG + GN V + +E+ + + +Y +L+ K
Sbjct: 68 RHIPLKGASVSLDRVQGDLVQVTGSNMGPDGNGVELESEMGRMAENQIMYNATVQLLAKK 127
Query: 121 NSMVMHVVRG 130
+ +RG
Sbjct: 128 FEGLKQAIRG 137
>gi|311105932|ref|YP_003978785.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
A8]
gi|310760621|gb|ADP16070.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
A8]
Length = 135
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q ++RQ+++S NIANA TPNY+A+D F+T + + +
Sbjct: 9 FRFFQQSLGLRAQRQEVLSSNIANADTPNYKARDF-DFKTAMANAMEGTK-RLPDTSLTL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + + + GNTV + E + Y+ +++
Sbjct: 67 TSARHIPAKAVSQGPTELLYRLPYQPSMDGNTVDMDIERVQFADNTLHYQSTMQMLSGRI 126
Query: 122 SMVMHVVR 129
+M ++
Sbjct: 127 RTMMAAIQ 134
>gi|23092312|gb|AAN08637.1| FlgB [Aeromonas hydrophila]
Length = 132
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETH 61
F I + S+R +++S NIANA TP ++A+DI +F L Q F +A T E H
Sbjct: 9 FGIHQYALSVRSKRAEVLSSNIANADTPGFKARDI-NFSQALEEAQHQQGFGLATTSEKH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ PL TG GNTV + E + Y+ + + +
Sbjct: 68 FALQSDAPGLTQ---YRNPLQPDTG---DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKI 121
Query: 122 SMVMHVVRG 130
S ++ ++G
Sbjct: 122 SGLLKALKG 130
>gi|21242730|ref|NP_642312.1| flagellar basal body rod protein FlgB [Xanthomonas axonopodis pv.
citri str. 306]
gi|78047589|ref|YP_363764.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294625271|ref|ZP_06703910.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|294664588|ref|ZP_06729929.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|21108206|gb|AAM36848.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
gi|78036019|emb|CAJ23710.1| flagellar basal body protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292600445|gb|EFF44543.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292605645|gb|EFF48955.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 133
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F + +R K+++ N++N TP Y+AKD+ +FE L L+ T
Sbjct: 7 SFLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLLQTTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + +GL+ EA + GNTV E G Y + ++
Sbjct: 66 AKHYEVGGGAGLNPFQFTREA-----DQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 120
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 121 SKVRSMLTAITG 132
>gi|212639570|ref|YP_002316090.1| flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
WK1]
gi|212561050|gb|ACJ34105.1| Flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
WK1]
Length = 126
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
FQI Q N+ S +QK+++ NIAN TPN++AKD+ F T +Q RT H +
Sbjct: 6 NTFQILEQGLNYSSLKQKVIANNIANVDTPNFKAKDVQ-FRTEFHQALQAYRTDPRHFEF 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSM 123
+ + N V + E+ + Y L +L K NS
Sbjct: 65 KGGTSK------FFVTTKNDLVYNHNNNNVDLDKEMSDLAQNQIYYNALVERLNGKFNS- 117
Query: 124 VMHVVRG 130
+ V++G
Sbjct: 118 LKTVIKG 124
>gi|114330358|ref|YP_746580.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91]
gi|114307372|gb|ABI58615.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91]
Length = 136
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------FLMART 57
+ + RQ+++S NIANA TP+++AKD F + +A T
Sbjct: 7 NLLGFNQKALGLRAARQELLSGNIANADTPSFKAKDF-DFSKAMQNVQSPRQVQSALATT 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ SD + P + GNTV + E + Y+ I
Sbjct: 66 SSRHIGLSDFRSITSVPEQYRVPQQPSI----DGNTVDMDTERMQFMDNAIRYDAGLTFI 121
Query: 118 KKLNSMVMHVVR 129
++ +R
Sbjct: 122 SGQFRTLLSAIR 133
>gi|145298488|ref|YP_001141329.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851260|gb|ABO89581.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 132
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL----NQNFLMARTHETHL 62
F I S+R +++S NIANA TP ++A+DI+ E + Q F MA T E H
Sbjct: 9 FGIHQYTLGVRSKRAEVLSSNIANADTPGFKARDINFSEALAQAQHQQGFGMATTSEKHF 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ PL TG GNTV + E + Y+ + + + S
Sbjct: 69 ALQSDAPGLMQ---YRNPLQPDTG---DGNTVDVQQERSEFLRNSLEYQTSLEFMNGKIS 122
Query: 123 MVMHVVRG 130
++ ++G
Sbjct: 123 GLLKALKG 130
>gi|89056689|ref|YP_512140.1| flagellar basal body rod protein FlgB [Jannaschia sp. CCS1]
gi|88866238|gb|ABD57115.1| flagellar basal-body rod protein FlgB [Jannaschia sp. CCS1]
Length = 117
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + FQ+AS A + RQ +V++NIANA TP YRA+D++ F+
Sbjct: 2 FEGLEIFQLASGLARHSASRQAVVAQNIANADTPGYRARDVADFQQTWRN---------- 51
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ V +D T +GN+V + E+ + + + ++
Sbjct: 52 ----MTAEAREGRTEVPMRVIDARTPASPNGNSVSLEFEMLRGIEAQRAHSRALRVYGSA 107
Query: 121 NSMVMHVV 128
+++ +
Sbjct: 108 MTILRTSI 115
>gi|239817168|ref|YP_002946078.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110]
gi|239803745|gb|ACS20812.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110]
Length = 136
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIA+A TPNY+A+D F + L Q R + ++ +
Sbjct: 9 LRFNREALNLRTQRQEVLAANIAHADTPNYKARDF-DFASRLTQAVEHGRAAQQPVQMAA 67
Query: 67 SSGLHWNAHVIEAPLDQ------TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+S H A + ++ + + GNTV + E YE N ++
Sbjct: 68 TSARHIQADAPSSMPERDLLYRVPSQASIDGNTVEMDAERINFADNALRYEANLTVVSAK 127
Query: 121 NSMVMHVVR 129
++ +
Sbjct: 128 IKSLLSAAQ 136
>gi|222530142|ref|YP_002574024.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor bescii
DSM 6725]
gi|222456989|gb|ACM61251.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor bescii
DSM 6725]
Length = 133
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + + +W ER KI+S NIANA TP Y+AKD+ +F L + + +
Sbjct: 2 INMFDKIDLYKKALDWAWERNKIISNNIANADTPGYKAKDL-NFRAFLQRSLNQEESLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T+E H+KES S N LD + +++ NTV I E+ K ++ +
Sbjct: 61 VTTNERHIKESSS-----NPDNSLEVLDSSLQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 115
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 116 LQLSREINKWKTVIK 130
>gi|295097206|emb|CBK86296.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 136
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q LS RQ++++ NIANA TP Y+A+DI F L + +
Sbjct: 9 FRFQQQALGLLSRRQEVLASNIANADTPGYQARDI-DFSQQLKNALGNKPASGP-VTMAL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H + Q GNTV + E Y+ + +
Sbjct: 67 TSSKHMQGKKMPFDDAQLLYRVPDQPSADGNTVDMDRERVNFADNAMKYQSSLTFLGADI 126
Query: 122 SMVMHVV 128
+M VV
Sbjct: 127 KKMMTVV 133
>gi|166712065|ref|ZP_02243272.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 133
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F + +R K+++ N++N TP Y+AKD+ +FE L LM T
Sbjct: 7 SFLGVHGDALALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H GL+ E + + GNTV E G Y + ++
Sbjct: 66 AKHYAVGGGGGLNPFQITRE-----SDQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 120
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 121 SKVRSMLTAITG 132
>gi|295399806|ref|ZP_06809787.1| flagellar basal-body rod protein FlgB [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111682|ref|YP_003989998.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
gi|294978209|gb|EFG53806.1| flagellar basal-body rod protein FlgB [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216783|gb|ADP75387.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
Length = 130
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ Q ++ + R+K+++ NIAN TPNY+AK + F T L++ TH K
Sbjct: 10 MLEQGLDYAALREKVIANNIANVDTPNYKAKSVQ-FRTELDRALQPLEAKRTHPKHLPFH 68
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
N + D +GN V I E+ + Y + + + + V+
Sbjct: 69 HQISNQFFVTKRTD--VVYNHNGNNVDIDKEMADLAENQIYYNALVERLNGKFTTLKTVI 126
Query: 129 RG 130
+G
Sbjct: 127 KG 128
>gi|162147438|ref|YP_001601899.1| flagellar basal-body rod protein flgB [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786015|emb|CAP55597.1| putative flagellar basal-body rod protein flgB [Gluconacetobacter
diazotrophicus PAl 5]
Length = 139
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
+A +WL R+ +++ N+ANA+TP Y KD++ F+ +L + M A+T H+
Sbjct: 16 DLLGLAKDRLHWLEARESVLAGNVANANTPGYVPKDMTPFQGVLQEQMGMTLAQTEPGHM 75
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S N V + EL K T + S
Sbjct: 76 AGQGGSARTHRTG---------GSASADKNEVSLEAELEKVADTSDQQRFATNVYSLYMS 126
Query: 123 MVMHVV 128
M +
Sbjct: 127 MYSTAL 132
>gi|260428994|ref|ZP_05782971.1| flagellar basal body rod protein FlgB [Citreicella sp. SE45]
gi|260419617|gb|EEX12870.1| flagellar basal body rod protein FlgB [Citreicella sp. SE45]
Length = 125
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-THE 59
Q + F+ A A +Q I S+N+ANA P YR +I F L Q R T
Sbjct: 2 FQSLDVFRTAMALARHSGLQQAISSQNVANADAPGYRGLEIPDFAETLRQPLTGQRATRA 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
THL + GL P + V +GNTV + E+ + + + +
Sbjct: 62 THLNGALQDGL-------PEPHTRRATVDPNGNTVSLETEMVTAVEASRAHNKALSIYRS 114
Query: 120 LNSMVMHVV 128
+++ +
Sbjct: 115 NLTLLRASL 123
>gi|300722685|ref|YP_003711975.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
nematophila ATCC 19061]
gi|297629192|emb|CBJ89788.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus nematophila ATCC 19061]
Length = 138
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ + ++RQ+I+S NIANA TP Y+A+DI F L + R + +
Sbjct: 9 FQFRQEALALRNQRQEILSANIANADTPGYQARDI-DFAAQLKKTMAHGRVTGNGIGLTL 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H + + GNTV + E Y+ +
Sbjct: 68 TSERHIPIQPQKRLEMDLLYRMPYQTAMDGNTVDMDMERSNFADNSLKYQAELTMTNVQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMSVLQ 135
>gi|325918874|ref|ZP_08180951.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC
35937]
gi|325534911|gb|EGD06830.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC
35937]
Length = 133
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F + + +R K+++ N++N TP Y+AKD+ +FE L LM T
Sbjct: 7 SFLGVHGDALSLREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGMQDGGLMQATD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H + S+GL+ EA + GNTV E G Y + ++
Sbjct: 66 AKHYEVGGSAGLNPFQITREA-----DQPSLDGNTVDPDAERAAYGRAALEYRASLSFLE 120
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 121 SKVRSMLTAITG 132
>gi|293605000|ref|ZP_06687396.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
ATCC 43553]
gi|292816605|gb|EFF75690.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
ATCC 43553]
Length = 135
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q ++RQ+++S NIANA TPNY+A+D F+T + ++ +
Sbjct: 9 FRFYQQALGLRAQRQEVLSSNIANADTPNYKARDF-DFKTAMQNAMEDSK-RLADTSLTL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + + GNTV + E + Y+ ++I
Sbjct: 67 TSARHIPAKAVSQGPTDLLFRLPYQPSMDGNTVDMDIERVQFADNTLHYQSTMQMISGRI 126
Query: 122 SMVMHVVR 129
+ ++
Sbjct: 127 RTMQTAIQ 134
>gi|292492360|ref|YP_003527799.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
Nc4]
gi|291580955|gb|ADE15412.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
Nc4]
Length = 133
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART---HETHLK 63
I + S R ++++ N+ANA TP Y+A+DI F+T L Q TH +
Sbjct: 9 LGIHPYALSLWSRRAELLAANLANADTPGYKARDI-DFKTALQQAQGQGAALPLQVTHGR 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S+ H EA + GNTV E K Y+ + +
Sbjct: 68 HLPSAAGHPPGG--EALYRLPLQASIDGNTVDSQVEHGKFMQNALQYQASLHFLSGSFKG 125
Query: 124 VMHVVRG 130
+ ++G
Sbjct: 126 LQSALKG 132
>gi|51246505|ref|YP_066389.1| flagellar basal-body rod protein (FlgB) [Desulfotalea psychrophila
LSv54]
gi|50877542|emb|CAG37382.1| related to flagellar basal-body rod protein (FlgB) [Desulfotalea
psychrophila LSv54]
Length = 137
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHETHL 62
++ + + + +Q+++S NIANA TP Y A+ +FE L + + ++ H+
Sbjct: 12 RLLGKVLDLRASKQEVISSNIANAETPGYAARRF-NFEEDLQKALSLNSTELTTSNPRHI 70
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S+ P G N+V + +E+ + LYE + +L+KK
Sbjct: 71 PLGASTFSDLEGTTTIVPDKHGIG---DSNSVSMRDEMLALSENQLLYETSAQLLKKKLG 127
Query: 123 MVMHVVRG 130
MV + + G
Sbjct: 128 MVKYAISG 135
>gi|121997322|ref|YP_001002109.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
SL1]
gi|121588727|gb|ABM61307.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
SL1]
Length = 135
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-----MARTHETH 61
F + Q ER ++++ NIANA TP Y+A+D+ F + Q + T H
Sbjct: 9 FSVPEQAMRLRGERNELLASNIANADTPGYKARDM-DFREAMRQASEPQPQPLQATSPQH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ SS + A ++ + + GNTV + E K Y+ +
Sbjct: 68 VQPPPSSSM--AAGDPKSLYREPHAASLDGNTVEMHVEQAKFAENAVNYQAAVDFLNGRI 125
Query: 122 SMVMHVVRG 130
+ +RG
Sbjct: 126 QKLTGAIRG 134
>gi|290474969|ref|YP_003467853.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
bovienii SS-2004]
gi|289174286|emb|CBJ81076.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus bovienii SS-2004]
Length = 138
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + ++RQ+I+S NIANA TP Y+A+DI F L Q R +K
Sbjct: 9 FHFRQEALALRNQRQEILSANIANADTPGYQARDI-DFAAQLKQVMAEGRVTGNGMKLRL 67
Query: 67 SSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A ++ + GNTV + E Y+ +
Sbjct: 68 ASDRHIPAQSQNRLEMDLLYRVPYQTAMDGNTVDMDVERSHFADNSLKYQAELTMTNSQL 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMSVLQ 135
>gi|39936949|ref|NP_949225.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
CGA009]
gi|39650806|emb|CAE29329.1| possible flagellar basal-body rod protein FlgB [Rhodopseudomonas
palustris CGA009]
Length = 168
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + W ERQK+++ENI+N+ TPN+R +D+ E A
Sbjct: 36 INDLPELNALRTKMQWHQERQKVLAENISNSDTPNFRPRDLV--EPKFTPEGQAAGGPGG 93
Query: 61 HLKESDSSGLHWNAHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
L +S H + +GN V + +E+ K + Y T L
Sbjct: 94 SLPLMRTSASHLTPPGGSPSFSTNNNGGFQTRPAGNAVNLEDEMLKVSSNQMDYAAVTSL 153
Query: 117 IKKLNSMVMHVV 128
+ ++ +
Sbjct: 154 YSRSLGLLKTAI 165
>gi|196247642|ref|ZP_03146344.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
gi|196212426|gb|EDY07183.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
Length = 129
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESDSS 68
Q + S RQ+ +++NIAN TP Y+AKD+ F+ LN+ + RT+ H
Sbjct: 12 EQGLRYASLRQQAIADNIANVDTPGYKAKDVR-FQAELNRALQLEAKRTNPNHFPF---- 66
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
I + + N+V I E+ K + Y + + + + V+
Sbjct: 67 -RSEQNGKIIVTANANISYNHNSNSVDIDQEMSKLAENQIYYNALIEQLNGKFNTLKTVI 125
Query: 129 RG 130
+G
Sbjct: 126 KG 127
>gi|187478182|ref|YP_786206.1| flagellar basal body rod protein FlgB [Bordetella avium 197N]
gi|115422768|emb|CAJ49296.1| flagellar basal-body rod protein [Bordetella avium 197N]
Length = 135
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ Q + ++RQ+++S NIANA TPNY+A+D F+T + R +
Sbjct: 9 FRFFQQAISLRAQRQEVLSSNIANADTPNYKARDF-DFKTAMQNALD-GRMQLPDTQLHL 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + + + + GNTV + E + Y+ + +++
Sbjct: 67 TSARHIPAKAVSSGPAELQYRLPYQASLDGNTVDMDIERVQFADNTLHYQSSLQMLSGRI 126
Query: 122 SMVMHVV 128
+ +
Sbjct: 127 RTLQSAI 133
>gi|238796901|ref|ZP_04640405.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
gi|238719161|gb|EEQ10973.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
43969]
Length = 137
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + + L++RQ I++ NIAN TP Y A+D+ F L + L
Sbjct: 7 NALRFQQEALSLLTQRQDILASNIANVDTPGYLARDM-DFSQQLKNAVDRSAPDNAPLTL 65
Query: 65 SDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ +SG H +Q GNTV + E Y+ + ++
Sbjct: 66 ALTSGTHIAGVAPAINSNQLLYRIPDQPSADGNTVDMDRERVSFADNSMKYQSSLTILGS 125
Query: 120 LNSMVMHVV 128
+M V+
Sbjct: 126 QIKGMMSVI 134
>gi|83944174|ref|ZP_00956630.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
gi|83955125|ref|ZP_00963781.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
gi|83840454|gb|EAP79627.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
gi|83845041|gb|EAP82922.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
Length = 117
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
P + F +A + WL+ RQ +VSENIAN+ YRA+D+ SF + L
Sbjct: 4 DPTSLFSLAPKRLQWLATRQNVVSENIANSDVAGYRAQDVQSFASYLED----------- 52
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S A V+EA G +GN V + +L ++ +++ L +K +
Sbjct: 53 ---AGRSQRLQEAEVVEA--RVLGGATATGNNVNLEEQLVEANSASGQFQMAASLYRKAH 107
Query: 122 SMVMHVV 128
MV V
Sbjct: 108 EMVYAVA 114
>gi|167948873|ref|ZP_02535947.1| Flagellar basal-body rod protein FlgB [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 127
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN----FLMARTHETHLK 63
I Q + R ++++ N+ANA TP Y+A+D F +L Q + TH +H++
Sbjct: 6 GIHPQALLLRARRSELIASNLANADTPGYKARDF-DFHKVLQQAQGEPVRLRTTHPSHIQ 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + + + GNTV E Y+ + + + S
Sbjct: 65 DEQG-----VVPPTQMLYRIPSQPSLDGNTVETEREQSTFASNSLEYQASLRFLNGKISS 119
Query: 124 VMHVVRG 130
+ ++G
Sbjct: 120 LRQAIKG 126
>gi|312792644|ref|YP_004025567.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179784|gb|ADQ39954.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 133
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLM 54
I F + + +W +R +I+S NIANA TP Y+ KD+ +FE L + N +
Sbjct: 2 INMFDKIDLYKKALDWAWKRNEIISNNIANADTPGYKVKDL-NFEAFLQKSLNQEENLEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T E H+KES SS + LD + +++ NTV I E+ K ++ +
Sbjct: 61 VTTDERHIKESSSSQDNSI-----EVLDSSLQMRLDQNTVDIEQEMGKLLQNSLYFDGVS 115
Query: 115 KLIKKLNSMVMHVVR 129
+ + + V++
Sbjct: 116 LQLSREINKWKTVIK 130
>gi|319787124|ref|YP_004146599.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas suwonensis
11-1]
gi|317465636|gb|ADV27368.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas suwonensis
11-1]
Length = 139
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 1 MQPITFF-QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------- 51
+ PI+ + + + +R K+++ N+ANA TP Y+A+D+ F L+
Sbjct: 2 LNPISSYMGVHADALPLREQRMKLIASNLANADTPGYKAQDL-DFNAALDAATRSRTGGV 60
Query: 52 ----FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ A THE+HL+++ ++GL + +A + + GNTV E G
Sbjct: 61 ANGPGVPAATHESHLQDAIATGLAPFQYTRQA-----SQPSLDGNTVDADVERAAYGRAA 115
Query: 108 YLYELNTKLIKKLNSMVMHVVRG 130
Y + ++ ++ + G
Sbjct: 116 LEYRASLSFVEGKVRTLLTAITG 138
>gi|330830306|ref|YP_004393258.1| flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
gi|328805442|gb|AEB50641.1| Flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
Length = 132
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETH 61
F + + ++R +++S NIANA TP ++A+DI +F L Q F +A T E H
Sbjct: 9 FGVHQHTISVRAKRAEVLSSNIANADTPGFKARDI-NFAQALQEAQSHQGFGLATTSEKH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + PL TG GNTV + E + Y+ + + +
Sbjct: 68 FALNMDAPGTVQ---YRNPLQPDTG---DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKI 121
Query: 122 SMVMHVVRG 130
S ++ ++G
Sbjct: 122 SGLLKALKG 130
>gi|307823528|ref|ZP_07653757.1| flagellar basal-body rod protein FlgB [Methylobacter tundripaludum
SV96]
gi|307735513|gb|EFO06361.1| flagellar basal-body rod protein FlgB [Methylobacter tundripaludum
SV96]
Length = 130
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----LMARTHETHL 62
I + + +R +I++ N+ANA TPN++A+D+ F+++L Q+ M RTH H+
Sbjct: 9 LGIEPKALAFREKRGEILAANLANADTPNFKARDV-DFKSVLKQSMTSGVAMERTHAGHI 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
V + GNTV E K Y+ + + I S
Sbjct: 68 AP------QQQVVGANVMYRNPYQVSLDGNTVEAHVEQAKYAENAVQYQASLQFISNKFS 121
Query: 123 MVMHVVRG 130
+M VRG
Sbjct: 122 GLMTAVRG 129
>gi|94312666|ref|YP_585875.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|93356518|gb|ABF10606.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|222834412|gb|EEE72889.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 8/135 (5%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
M + F+ + ++RQ +++ NIA+A TP Y+A+D F + L Q+ +
Sbjct: 1 MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDF-DFASTLAQSVERGQ-RS 58
Query: 60 THLKESDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
S +S H + + + GNTV + E YE
Sbjct: 59 EGTSLSTTSVRHLPGQAPTSTGHELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGL 118
Query: 115 KLIKKLNSMVMHVVR 129
++ ++ ++
Sbjct: 119 TVMSSKIKTMLAAIQ 133
>gi|190574266|ref|YP_001972111.1| flagellar basal body rod protein FlgB [Stenotrophomonas maltophilia
K279a]
gi|254523965|ref|ZP_05136020.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp. SKA14]
gi|190012188|emb|CAQ45811.1| putative flagellar basal-body rod protein FlgB [Stenotrophomonas
maltophilia K279a]
gi|219721556|gb|EED40081.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp. SKA14]
Length = 131
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+ + +Q +R K+++ N+ NA TP Y+A+D+ F+ L + N LMA TH
Sbjct: 7 DYLGVHAQAMPLREQRMKLIASNLGNADTPGYKAQDL-DFDAALRHAQGQDANGLMATTH 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H + SSGL+ E + GNTV E G Y + ++
Sbjct: 66 EQHYEI--SSGLNPFQIAREGV-----QPSLDGNTVDPDAERAAYGRAALEYRASLSFVE 118
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 119 SKVRSMLTAITG 130
>gi|308050375|ref|YP_003913941.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
gi|307632565|gb|ADN76867.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
Length = 131
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETH 61
I +ER +++S NIANA TPNY+A+D+ FE L Q+F +AR+HE H
Sbjct: 9 LGIHQHTLGVRAERAEVLSSNIANADTPNYKAQDL-DFEQALAGAKSRQSFALARSHEKH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
S PL TG GNTV + E ++++ +
Sbjct: 68 FDASIDPQ---PGLKFRVPLHPDTG---DGNTVDLQTERNLFMQNTLEHQMSLGFLDGKF 121
Query: 122 SMVMHVVRG 130
S + +RG
Sbjct: 122 SGLKKAIRG 130
>gi|15616943|ref|NP_240156.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|25403596|pir||B84969 flagellar basal-body rod protein flgB [imported] - Buchnera sp.
(strain APS)
gi|10039008|dbj|BAB13042.1| flagellar basal-body rod protein flgB [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 115
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHETHLKESDSSGLHW 72
RQ+I+S NIANA TP Y++ D +F+ LN+ + +T HL E H
Sbjct: 4 RQEILSANIANADTPGYKSIDF-NFKNELNKTLYKNKKTIFLKKTSPNHLNE-----KHK 57
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
N +++ T ++ GNTV + E + + Y+ + IK +M+V++G
Sbjct: 58 NLFLLKTIPVLTNQIKQDGNTVNMDRERIEFLNNSIKYQSSLVFIKNEIKNMMYVLKG 115
>gi|220934391|ref|YP_002513290.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995701|gb|ACL72303.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
HL-EbGR7]
Length = 130
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHL 62
I + S R ++++ N+ANA TPNY+A+DI F L+Q + RTH +HL
Sbjct: 9 LGIHADALQLRSRRLELLASNLANADTPNYKARDI-DFRAALSQAQGGGVGLMRTHASHL 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
E + GNTV E Y+ + +
Sbjct: 68 SVQGGGVGG------EPLYRIPNQPSLDGNTVDAQLEQAAFSENAVQYQASLDFLNSRFR 121
Query: 123 MVMHVVRG 130
+ ++G
Sbjct: 122 GLRTALKG 129
>gi|299131776|ref|ZP_07024971.1| flagellar basal body rod protein FlgB [Afipia sp. 1NLS2]
gi|298591913|gb|EFI52113.1| flagellar basal body rod protein FlgB [Afipia sp. 1NLS2]
Length = 131
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 10/129 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH-L 62
+ + W ERQ++++EN++N+ TPN+R +D+ + F + H +
Sbjct: 6 LPMLSMLRTKMQWHQERQRVLAENVSNSDTPNFRPRDL------VEPTFDKTGINGMHEI 59
Query: 63 KESDSSGLHWNAHVIEAPLDQTTG---VQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+S H A + TG + +GN V I +E+ K + Y T L K
Sbjct: 60 SMVRTSANHIQAAGVSETFGSNTGGYETRPAGNAVNIEDEMLKVASNQMDYAAATSLYTK 119
Query: 120 LNSMVMHVV 128
++ +
Sbjct: 120 SLDLIKTAI 128
>gi|260222464|emb|CBA32054.1| Flagellar basal-body rod protein flgB [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 166
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 15/140 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHE 59
S+ +ERQ++++ NIANA TP Y +D F+ + + +A
Sbjct: 27 NALDFQSKGLVLRAERQRVIASNIANADTPGYSGRDF-DFKKAMAEATSGPTIALAPPSS 85
Query: 60 THLKESDSSGLHWNAHVIEAPLDQT---------TGVQVSGNTVGITNELYKSGHIKYLY 110
+ ++ H IE T + GN+V + E Y
Sbjct: 86 GTPADGTTNNRHIPLTPIEGSSIGDNNKLGYTIQTQPAMDGNSVDLDRERANFVDNSVRY 145
Query: 111 ELNTKLIKKLNSMVMHVVRG 130
E + I + ++ ++G
Sbjct: 146 EATLRFINGSSRTILSAIQG 165
>gi|170725952|ref|YP_001759978.1| flagellar basal body rod protein FlgB [Shewanella woodyi ATCC
51908]
gi|169811299|gb|ACA85883.1| flagellar basal-body rod protein FlgB [Shewanella woodyi ATCC
51908]
Length = 132
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
+ S+R +++S NIANA TP+Y+A+DI F+ L + M +
Sbjct: 9 LGVHQYTLGIRSQRAEVISSNIANADTPHYKARDI-DFDKALQAATSQQRGLAMTGSDSK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + S H+ P TG GNTV I E + Y+++ +
Sbjct: 68 HFDLAALSEQHYG---YRVPNQPDTG---DGNTVDIQQEQSEFMQNALEYQMSLGFLDSK 121
Query: 121 NSMVMHVVRG 130
S + ++G
Sbjct: 122 FSGLKKALKG 131
>gi|127512276|ref|YP_001093473.1| flagellar basal body rod protein FlgB [Shewanella loihica PV-4]
gi|126637571|gb|ABO23214.1| flagellar basal-body rod protein FlgB [Shewanella loihica PV-4]
Length = 132
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
I S R +++S NIANA TP+Y+AKD+ F+ L M+R++E
Sbjct: 9 LGIHQYTLGIRSARAEVISSNIANADTPHYKAKDL-DFDKALQAARTAQSGLAMSRSNEK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + S H + P TG GNTV I E + Y+++ +
Sbjct: 68 HFDLAALSQQHIS---YRVPNQPDTG---DGNTVDIQQEQSEFMQNALEYQMSLGFLDGK 121
Query: 121 NSMVMHVVRG 130
S + ++G
Sbjct: 122 FSGLKKALKG 131
>gi|285018212|ref|YP_003375923.1| flagellar basal body protein [Xanthomonas albilineans GPE PC73]
gi|283473430|emb|CBA15935.1| probable flagellar basal body protein [Xanthomonas albilineans]
Length = 132
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 1/126 (0%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
++F + +R K+++ NI+N TP Y+A+D+ F+ + + + +
Sbjct: 7 SYFGVHGDALPLREQRMKLIASNISNVDTPGYKAQDL-DFDAAMRAAQGQREGTQLEVTD 65
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S + + +++ + GNTV E G Y + I +
Sbjct: 66 SRHIAVGGDGLNPFQITRESSQPNLDGNTVDPDAERAAYGRAALEYRASLSFIDSKVRTM 125
Query: 125 MHVVRG 130
+ + G
Sbjct: 126 LTAITG 131
>gi|126730139|ref|ZP_01745951.1| flagellar basal-body rod protein; FlgB [Sagittula stellata E-37]
gi|126709519|gb|EBA08573.1| flagellar basal-body rod protein; FlgB [Sagittula stellata E-37]
Length = 125
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-THE 59
Q + F+ A A +Q ++N+ANA TP Y +K ++ F + + Q R T E
Sbjct: 2 FQNLDVFRTAMAMARHAGVQQAYSAQNMANADTPGYHSKAVAEFSSSVRQGLSGQRATRE 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL S S ++ T +GNTV + E+ + + K ++ + +
Sbjct: 62 RHLNGSTSHAPEIT--------ERDTPADPNGNTVSVEEEMMFAVNAKRQHDRALAIYRS 113
Query: 120 LNSMVMHVV 128
+++ +
Sbjct: 114 NLNILRSSL 122
>gi|289208111|ref|YP_003460177.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp. K90mix]
gi|288943742|gb|ADC71441.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp. K90mix]
Length = 136
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETH 61
I + N ++R ++++ NIANA TPNY+A+DI F ++L N MA TH+ H
Sbjct: 10 GILPEAVNVRAKRMELLASNIANADTPNYKARDI-DFRSVLQAAAGEGGNMPMASTHQGH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + G + + + Q + GNTV E Y+ + + + +
Sbjct: 69 IGAGGAGGANGSMETLYRVPSQP---SLDGNTVDPQLERAAFAENSLQYQSSLEFLNRRV 125
Query: 122 SMVMHVVRG 130
S + +RG
Sbjct: 126 SGIRDALRG 134
>gi|261856363|ref|YP_003263646.1| flagellar basal-body rod protein FlgB [Halothiobacillus
neapolitanus c2]
gi|261836832|gb|ACX96599.1| flagellar basal-body rod protein FlgB [Halothiobacillus
neapolitanus c2]
Length = 132
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 2/128 (1%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ F I Q + S+R I++ NIANA TPN++A+D+S + + + L
Sbjct: 4 SIFGIHGQALVFQSQRMGILASNIANADTPNFKARDLSFHDALQAAAGQGSAGQPLALAH 63
Query: 65 SDSSGLHWNAH--VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ L A + + GNTV + E + Y+ +
Sbjct: 64 NQPGQLSGTAENGGAQELYRIPDQPALDGNTVDMDRERVRFTENAVSYQTTLSFLNSRIK 123
Query: 123 MVMHVVRG 130
+ + G
Sbjct: 124 GINSALTG 131
>gi|311992323|gb|ADQ26735.1| proximal rod protein [Aeromonas hydrophila]
Length = 131
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISS----FETILNQNFLMARTHETHL 62
F I + S+R +++S NIANA TP ++A+DI+ E Q F +A T E H
Sbjct: 8 FGIHQYTLSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHF 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ PL TG GNTV + E + Y+ + + + S
Sbjct: 68 ALQMDAP---GVTQYRNPLQPDTG---DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKIS 121
Query: 123 MVMHVVRG 130
++ ++G
Sbjct: 122 GLLKALKG 129
>gi|119899030|ref|YP_934243.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
gi|119671443|emb|CAL95356.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
Length = 133
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 47/130 (36%), Gaps = 12/130 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
Q N + RQ++++ NIANA TP+Y+A+DI F L N +A T
Sbjct: 9 LQFHQTALNLQAHRQQLLASNIANADTPHYKARDI-DFREALQGALGKQSNLALATTQSR 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ L V GNTV + E YE + I L
Sbjct: 68 HIAGGGGDVLEGATKYRT-----ELQSAVDGNTVNMDVERAAFAENAIHYEASITFINGL 122
Query: 121 NSMVMHVVRG 130
+ + G
Sbjct: 123 LRGMQTAISG 132
>gi|332092884|gb|EGI97952.1| flagellar basal-body rod protein FlgB [Shigella dysenteriae 155-74]
Length = 114
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
++ NIANA TP Y+A+DI F + L + R + + + +S H A + P +
Sbjct: 2 LAANIANADTPGYQARDI-DFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAE 60
Query: 84 -----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ GNTV + E + Y+++ + +M+V++
Sbjct: 61 LQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQIKGMMNVLQ 111
>gi|92116945|ref|YP_576674.1| flagellar basal body rod protein FlgB [Nitrobacter hamburgensis
X14]
gi|91799839|gb|ABE62214.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
Length = 135
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILNQNFLMARTHETH 61
I+ W ERQ++++ENIAN+ TPN++ +D+ F+ A
Sbjct: 6 ISALAALRTRMQWHQERQRVLAENIANSDTPNFKPRDLVEPKFDAQGGNASGGATLAMMR 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ A + + +GN V + +++ K + Y T L +
Sbjct: 66 TTSGQTIAGSGPASNFDQNRHAGFQTRPAGNAVNLEDQMLKVSANQMDYAAATSLYSRSL 125
Query: 122 SMVMHVV 128
++ V
Sbjct: 126 RLLKMAV 132
>gi|1857439|gb|AAC45657.1| FlgB [Proteus mirabilis]
Length = 139
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 8/132 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F + + ++RQ+I++ NIANA TP ++A+DI F L + RT L+
Sbjct: 7 NTFHFQQEALSLRNKRQEILAANIANADTPGFQARDI-DFAAELKKTMENGRTGSHGLQL 65
Query: 65 SDSSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYK--SGHIKYLYELNTKLI 117
+ +S H + + GNTV + E Y + I
Sbjct: 66 TMTSERHIPIKPGYRLEADLLYRVPHQTSMDGNTVDMDMERSNLYVPDNSVKYLADVTFI 125
Query: 118 KKLNSMVMHVVR 129
+M V++
Sbjct: 126 NSQVKSMMAVLQ 137
>gi|302878273|ref|YP_003846837.1| flagellar basal-body rod protein FlgB [Gallionella
capsiferriformans ES-2]
gi|302581062|gb|ADL55073.1| flagellar basal-body rod protein FlgB [Gallionella
capsiferriformans ES-2]
Length = 134
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 12/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-------MARTHE 59
+ RQ++++ NIANA TP Y+A+DI +F + L MA +
Sbjct: 9 LHFNQTALSLRGARQELLASNIANADTPGYKARDI-NFASALQNALAGTSVKLPMATSSA 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL+ + + P GNTV + E + YE + K
Sbjct: 68 MHLEGNAGGQIMGAPVQYRRPD----QPSADGNTVNMDVERAQFADNALRYEASVKFTGD 123
Query: 120 LNSMVMHVVRG 130
++ ++G
Sbjct: 124 KLKDMLAALQG 134
>gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
CD2]
gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
CD2]
Length = 137
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
++ + + + R +++++NIAN TP Y+ K + SFE L+ RT H
Sbjct: 10 KVLEKSLDATATRNEVIAQNIANVDTPGYKRKTV-SFEEQLSDAISKNSSFKGRRTDPRH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ SS +V E + +++ GN V I NE+ + YE+ + I
Sbjct: 69 IAIGGSSADEVKINVSED--KSSLDMRLDGNNVDIENEMAQMAENNIRYEVLIQRISGSF 126
Query: 122 SMVMHVVR 129
S + V++
Sbjct: 127 SRMKSVIK 134
>gi|330502731|ref|YP_004379600.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina NK-01]
gi|328917017|gb|AEB57848.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina NK-01]
Length = 135
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q + ++R +++S NIANA TPNY+A+D+ + QN M R + +
Sbjct: 9 LGIHEQALGFRAQRAEVLSNNIANADTPNYKARDLDFASVLAEQNSRMQR---GGVALNR 65
Query: 67 SSGLHWNAHVI-----EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ H A + E P + NTV + E ++ + +
Sbjct: 66 TDSRHIPADGVNSGEAELPYRTPFHASLDQNTVDLQIEQANYAENAVQFQASFTFLNSKF 125
Query: 122 SMVMHVVRG 130
+ +RG
Sbjct: 126 KGLTSALRG 134
>gi|257095362|ref|YP_003169003.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047886|gb|ACV37074.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 136
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
Q + RQ++++ NIANA TPNYRA+D F L + L +
Sbjct: 9 LSFQQQALTLRAHRQQVLAANIANADTPNYRARDF-DFAAALQNAVSGRSQGQCGLTLAT 67
Query: 67 SSGLHWNAHV----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
++ H I Q GN+V + E + + YE T +
Sbjct: 68 TAAGHLPGDAELGQIALKYRQPAQASADGNSVEMDVERAQFAENAFFYETGTTFLTAQIR 127
Query: 123 MVMHVVRG 130
++ ++G
Sbjct: 128 TMLTALQG 135
>gi|117621022|ref|YP_857346.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562429|gb|ABK39377.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 132
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISS----FETILNQNFLMARTHETHL 62
F I + S+R +++S NIANA TP ++A+DI+ E Q F +A T E H
Sbjct: 9 FGIHQYTLSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHF 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ PL TG GNTV + E + Y+ + + + S
Sbjct: 69 ALQMDAP---GVTQYRNPLQPDTG---DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKIS 122
Query: 123 MVMHVVRG 130
++ ++G
Sbjct: 123 GLLKALKG 130
>gi|239826610|ref|YP_002949234.1| flagellar basal body rod protein FlgB [Geobacillus sp. WCH70]
gi|239806903|gb|ACS23968.1| flagellar basal-body rod protein FlgB [Geobacillus sp. WCH70]
Length = 130
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + Q ++ S R+K+++ NIAN TPNY+AK++ F L++ T+ K
Sbjct: 8 FMMLEQGLDYASLREKVIANNIANVDTPNYKAKEVR-FRAELDRALQPLEAKRTNPKHLP 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ N ++ + +GN V I E+ + Y + + + +
Sbjct: 67 FTRPMTNKFLVTS--RTNVVYNHNGNNVDIDQEMSYLAENQIYYNALVEQLNGKFTTLKT 124
Query: 127 VVRG 130
V++G
Sbjct: 125 VIKG 128
>gi|225850274|ref|YP_002730508.1| flagellar basal-body rod protein FlgB [Persephonella marina EX-H1]
gi|225646074|gb|ACO04260.1| flagellar basal-body rod protein FlgB [Persephonella marina EX-H1]
Length = 125
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ A++ ER K++ NIANA TP Y+ KD+ FE +L + + +T H+
Sbjct: 9 DRLEEKASYFLERTKVIQSNIANADTPFYKPKDLV-FEKVLTEQIKLKKTDPKHIDPFPE 67
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
++Q N V + EL K +Y+ + +KK + + +
Sbjct: 68 ERSSIKL------VEQGKLTGYDQNQVNVEEELAKLAESSIMYKTLLESMKKEMAKLKYA 121
Query: 128 VRG 130
+ G
Sbjct: 122 ITG 124
>gi|194365683|ref|YP_002028293.1| flagellar basal body rod protein FlgB [Stenotrophomonas maltophilia
R551-3]
gi|194348487|gb|ACF51610.1| flagellar basal-body rod protein FlgB [Stenotrophomonas maltophilia
R551-3]
Length = 131
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 14/132 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+ + +Q +R K+++ N+ NA TP Y+A+D+ F+ L + N LM T+
Sbjct: 7 DYLGVHAQAMPLREQRMKLIASNLGNADTPGYKAQDL-DFDAALRHAQGQDANGLMTTTN 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H + SSGL+ E + GNTV E G Y + ++
Sbjct: 66 EQHYEI--SSGLNPFQIAREGV-----QPSLDGNTVDPDAERAAYGRAALEYRASLSFVE 118
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 119 SKVRSMLTAITG 130
>gi|146307872|ref|YP_001188337.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina ymp]
gi|145576073|gb|ABP85605.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp]
Length = 135
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q + ++R ++++ NIANA TPNY+A+D+ F ++L + A+ ++ +
Sbjct: 9 LGIHEQALGFRAQRAEVLANNIANADTPNYKARDL-DFASVLAE--QNAKQQRGNVALAR 65
Query: 67 SSGLHWNAHVI-----EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ G H A + E P + NTV + E ++ + +
Sbjct: 66 TDGRHIAAEGVAMGQAELPYRTPFHASLDQNTVDLQIEQANYAENSVHFQASFTFLNSKF 125
Query: 122 SMVMHVVRG 130
+ + +RG
Sbjct: 126 KGLTNALRG 134
>gi|32490787|ref|NP_871041.1| hypothetical protein WGLp038 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165993|dbj|BAC24184.1| flgB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 136
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+F N + RQ I+S NIANA TP Y+++DI F+ +L + + ++ +L
Sbjct: 7 HYFNFQKAATNIFANRQAIISSNIANADTPKYQSRDI-DFKKLLKNFNELDK-NKRNLNL 64
Query: 65 SDSSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+S H N + L GNTV + E Y + +I
Sbjct: 65 KLTSKKHINKKNLFTSLGKLLYRVPIQASADGNTVDMDVERINFLDNSIKYHTSVSIIHG 124
Query: 120 LNSMVMHVV 128
+M V+
Sbjct: 125 QIKNMMSVL 133
>gi|114320054|ref|YP_741737.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226448|gb|ABI56247.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
MLHE-1]
Length = 134
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETH 61
F +ER ++++ NIANA TP+Y+A+D+ F+ + Q + TH H
Sbjct: 9 FGTQELALRLRAERSQLLASNIANADTPHYKAQDM-DFQAAMRAAEGKQAQPLQATHAKH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
S GL + + G + GNTV E + Y+ +
Sbjct: 68 FAVSRGGGLAGDPQAL---YRVPHGPALDGNTVESHVEQARFAENSVQYQATLTFLGNRI 124
Query: 122 SMVMHVVRG 130
+ ++ +RG
Sbjct: 125 TGLLGAIRG 133
>gi|309779444|ref|ZP_07674205.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
gi|308921685|gb|EFP67321.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
Length = 151
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 20/144 (13%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q + S+R +I++ NIANA TPNY+A+D F++ L + + M+
Sbjct: 7 QLFGFQEQALHLRSQRHQILASNIANADTPNYKARDF-DFQSALQKAVGQQGGNSLPMSA 65
Query: 57 THETHLKESDSSGLH-----------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
T HL + A E + + GNTV + E +
Sbjct: 66 TAAGHLSVDGAPAGDVSLMQASLSQQTKALQGEVQYRTSQQPSIDGNTVDMDGERMRFAD 125
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ + ++ ++
Sbjct: 126 NTVRYEADLSIVTQKIKSMLAAIQ 149
>gi|225849146|ref|YP_002729310.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643923|gb|ACN98973.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 122
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++ +++ ER K++ NIAN +TP Y+ KD+ FE + M T+ H+ +
Sbjct: 5 LDKINKMSSFYFERFKVIQGNIANVNTPFYKPKDLK-FEEVFKNFIPMKLTNPKHINPAG 63
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S + + N V + E+ K +Y+ +++KK + +
Sbjct: 64 SEDIKIT------SFENGYITGYDQNKVNLEEEMAKLAESSIMYKTLVEVMKKEMVKLKY 117
Query: 127 VVRG 130
+ G
Sbjct: 118 AISG 121
>gi|224825161|ref|ZP_03698267.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
gi|224602832|gb|EEG09009.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
Length = 136
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 10/132 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------FLMARTH 58
+F Q N ++R ++++ NIANA TPNY+A D+ F + L + T
Sbjct: 7 HYFDFQQQALNLRAKRAEVIASNIANADTPNYKAVDL-DFASALQSAQGTQSRLALNVTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ S +G E + GNTV + E Y+ +
Sbjct: 66 PAHIASSSGAGGAGAP---ELKYRSAVQRSLDGNTVDMDVERAAFTDNAMQYQSTLTFLN 122
Query: 119 KLNSMVMHVVRG 130
+ S + ++G
Sbjct: 123 RRISSLNEAIKG 134
>gi|115523570|ref|YP_780481.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisA53]
gi|115517517|gb|ABJ05501.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisA53]
Length = 136
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 15/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILN-------QN 51
+ + W ERQ+++++NIAN+ TP ++ +D+ F+ +
Sbjct: 3 INDLPTLAALRTRMQWHQERQRVLADNIANSDTPAFKPRDLIEPKFDASGRPAAGSPIGS 62
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
M RT H+ + + +GN V + +E+ K + Y
Sbjct: 63 LPMMRTSTAHIAPPGGT------ESFAPDRKGGFQTRPTGNAVNLEDEMLKVSSNQGSYA 116
Query: 112 LNTKLIKKLNSMVMHVV 128
T L + ++ +
Sbjct: 117 AATALYTRSLGVLKTAI 133
>gi|71907892|ref|YP_285479.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
gi|71847513|gb|AAZ47009.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
Length = 153
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 13/121 (10%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILN--------QNFLMARTHETHLKE 64
+ RQ++++ NIANA TP Y+A DI FE + ++A T H+
Sbjct: 31 ALGVRAYRQQLIASNIANADTPGYKAVDI-DFEEAMRIAQSASPIPPTMLATTSIGHISG 89
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S + P + GNTV + E K +Y+ + + M+
Sbjct: 90 EAVSAQPPYPLKYQVPSQDS----ADGNTVEMDVERTKFSENSIMYQFSVDRVSGHFKML 145
Query: 125 M 125
M
Sbjct: 146 M 146
>gi|209884535|ref|YP_002288392.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
gi|209872731|gb|ACI92527.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
Length = 132
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETI---LNQNFLMARTH 58
+ + W ERQ+I++EN++N+ TPN+R +++ F+ + M RT
Sbjct: 6 LPMLSMLRTKMQWHQERQRILAENVSNSDTPNFRPRELVEPTFDKTGISGMRELSMVRTS 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H++ + S + + + +GN V I +E+ K + Y L
Sbjct: 66 ANHIQAAGVS------EAFGSHTNGGYETRPAGNAVNIEDEMLKVASNQMDYAAAASLYS 119
Query: 119 KLNSMVMHVV 128
K ++ +
Sbjct: 120 KSLDLIKTAI 129
>gi|292900255|ref|YP_003539624.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291200103|emb|CBJ47229.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
Length = 135
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 10/129 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + LS RQ++++ NIANA TP Y A+DI F L ++ + S
Sbjct: 9 FLFQQEALSLLSRRQEVLASNIANADTPGYLARDI-DFSQQLKNTLANQSMAKSPVSLSL 67
Query: 67 SSGLHWNAHVIEAPLDQ-------TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++ H P D GNTV + E Y+ +
Sbjct: 68 TAEKHIEGKGR--PFDDANLLYRTPDQPSADGNTVDMDRERIGMADTNVKYQSGLTFLGA 125
Query: 120 LNSMVMHVV 128
+M V+
Sbjct: 126 DIKKMMSVL 134
>gi|149195180|ref|ZP_01872271.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
TB-2]
gi|149134732|gb|EDM23217.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
TB-2]
Length = 142
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----------QNFLMA 55
F I Q ++ RQ +++ NIANA TP YR KDI FE L + +A
Sbjct: 9 FGIMEQALHYRKIRQDMIASNIANADTPFYRPKDIR-FEDALQEEINKKFNKPSKKLELA 67
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+T+ HL+ D + + GN+V I E + Y +
Sbjct: 68 KTNPMHLEPKDIEDSYKPI----VFFRDGHLARNDGNSVDIDVETTEMAKNNIAYNATIQ 123
Query: 116 LIKKLNSMVMHVV 128
+KK + V+
Sbjct: 124 ALKKDIEIFKAVI 136
>gi|157961168|ref|YP_001501202.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
700345]
gi|157846168|gb|ABV86667.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
700345]
Length = 132
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
+ S+R +I+S NIANA TP Y+A+D+ F +N MA++
Sbjct: 9 LGVHQHTLGVRSQRAEILSSNIANADTPGYKARDV-DFSKAMNAAQSQQTGLAMAKSDSK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + + H P TG GNTV I E Y+++ +
Sbjct: 68 HFDMAALTQQHLG---YRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDSK 121
Query: 121 NSMVMHVVRG 130
S + +RG
Sbjct: 122 FSGMKKAIRG 131
>gi|254434266|ref|ZP_05047774.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani AFC27]
gi|207090599|gb|EDZ67870.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani AFC27]
Length = 148
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETHL 62
I Q S R ++++ N+AN TP Y+A+DI F+ L Q + TH H+
Sbjct: 26 LGIYPQAVTLGSRRAEVLAANLANGDTPGYKARDI-DFKAALQQAQGQGLPLQATHAGHV 84
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S EA + GNTV E + Y+ + +
Sbjct: 85 SHSLG-----QFPGGEALYRIPQQASLDGNTVDSQVEHSEFMQNALQYQASLHFLSGKFK 139
Query: 123 MVMHVVRG 130
++ +RG
Sbjct: 140 GLLSALRG 147
>gi|138894737|ref|YP_001125190.1| flagellar basal body rod protein FlgB [Geobacillus
thermodenitrificans NG80-2]
gi|134266250|gb|ABO66445.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
NG80-2]
Length = 129
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESDSS 68
Q + S RQ+ +++NIAN TP +AKDI F+ L++ + RT+ H
Sbjct: 12 EQGLRYASLRQQAIADNIANVDTPGCKAKDIR-FQAELDRALQLEAKRTNPNHFPF---- 66
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
I + + N+V I E+ K + Y + + + + V+
Sbjct: 67 -RSEQNGKIIVTANANISYNHNSNSVDIDQEMSKLAENQIYYNALIEQLNGKFNTLKTVI 125
Query: 129 RG 130
+G
Sbjct: 126 KG 127
>gi|58582192|ref|YP_201208.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84624085|ref|YP_451457.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|58426786|gb|AAW75823.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368025|dbj|BAE69183.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 132
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 13/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+F + +R K+++ N++N TP Y+AKD+ +FE L LM T
Sbjct: 7 SFLGVHGDALALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H G N I DQ + GNTV E G Y + ++
Sbjct: 66 AKHYAV---GGGGLNPFQITRESDQP---SLDGNTVDPDAERAAYGRAALEYRASLSFLE 119
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 120 SKVRSMLTAITG 131
>gi|157376219|ref|YP_001474819.1| flagellar basal body rod protein FlgB [Shewanella sediminis
HAW-EB3]
gi|157318593|gb|ABV37691.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
HAW-EB3]
Length = 132
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
+ S+R +++S NIANA TP+Y+A+D+ F+ + M+R+
Sbjct: 9 LGVHQYTLGIRSQRAQVISSNIANADTPHYKARDL-DFDKAMQAATSRQNGLSMSRSDVK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + SG + P TG GNTV I E + Y+++ +
Sbjct: 68 HFDLTALSGQN---TAYRVPNQPDTG---DGNTVDIQQEQSEFMQNALEYQMSLGFLDSK 121
Query: 121 NSMVMHVVRG 130
S + +RG
Sbjct: 122 FSGLKKALRG 131
>gi|237653586|ref|YP_002889900.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
gi|237624833|gb|ACR01523.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
Length = 134
Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 13/130 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMARTHET 60
Q N + RQ++++ NIANA TP+Y+A+D+ F L + MA T
Sbjct: 10 QFHQTALNLQAHRQQLIASNIANADTPHYKARDV-DFRAALQGALNASREGVQMATTQAG 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + + L V GNTV + E YE + I +
Sbjct: 69 HIGSAPAPALESLTG-----YRSELQSAVDGNTVNMDVERAAFAENALHYEASVTFINGM 123
Query: 121 NSMVMHVVRG 130
+ + G
Sbjct: 124 LRSMNTAITG 133
>gi|302037601|ref|YP_003797923.1| flagellar basal-body rod protein FlgB [Candidatus Nitrospira
defluvii]
gi|300605665|emb|CBK41998.1| Flagellar basal-body rod protein FlgB [Candidatus Nitrospira
defluvii]
Length = 135
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 8/127 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-----FLMARTHETHL 62
Q+ S+ + RQ++++ NIAN TP YRAKD++ + + N + T+ H
Sbjct: 9 QLLSRSLDLRGARQQVIAANIANEETPKYRAKDLNFGQALANAQQGKLPISLVSTNAQHF 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + + P + + N+V I E+ K Y +I
Sbjct: 69 GPQGTGYQRVLGQLEDVP---AGDLPLDANSVNIELEMAKMSDNAQQYNTAATIIGMKFK 125
Query: 123 MVMHVVR 129
++ +R
Sbjct: 126 GLLSAIR 132
>gi|292489136|ref|YP_003532023.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430]
gi|291554570|emb|CBA22186.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430]
gi|312173294|emb|CBX81549.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
BAA-2158]
Length = 147
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + LS RQ++++ NIANA TP Y A+DI F L ++ + S
Sbjct: 21 FLFQQEALSLLSRRQEVLASNIANADTPGYLARDI-DFSQQLKNTLANQSMAKSPVSLSL 79
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H GNTV + E Y+ +
Sbjct: 80 TAEKHIEGKGRPFDDANLLYRTPDQPSADGNTVDMDRERIGMADTNVKYQSGLTFLGADI 139
Query: 122 SMVMHVV 128
+M V+
Sbjct: 140 KKMMSVL 146
>gi|171059415|ref|YP_001791764.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
gi|170776860|gb|ACB34999.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
Length = 134
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 13/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMART 57
SQ SERQ++++ NIANA TP Y A+D+ F + L Q +A T
Sbjct: 7 DTLNFQSQALVLRSERQRLIASNIANAETPGYVARDL-DFASALKQAVGEQSVGGALATT 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H H+ + + + + + NTV + E YE + I
Sbjct: 66 HGGHIPVAVGA-----RSASQLTYATASQSSLDNNTVDMDRERASFADNAVKYESTLRFI 120
Query: 118 KKLNSMVMHVVRG 130
S +M ++G
Sbjct: 121 NGSVSTLMSAIKG 133
>gi|89098647|ref|ZP_01171529.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
gi|89086609|gb|EAR65728.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
Length = 135
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA- 55
M + F N S +QK+V++NIANA TPNY+AKD+ SF+++L +
Sbjct: 1 MLKLNIFSNTISTLENSLNQASLKQKVVAQNIANADTPNYKAKDV-SFKSVLQSEMAIGG 59
Query: 56 ----RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
RT H + + ++ T +GN V + E+ + + Y
Sbjct: 60 IEAKRTDVRHYSFAAEGSGQSGVII-----NKNTDFNHNGNNVDMDKEMSELAENQIYYN 114
Query: 112 LNTKLIKKLNSMVMHVVRG 130
+ I + + +V+RG
Sbjct: 115 ALVERISGKFTSLQNVIRG 133
>gi|258511108|ref|YP_003184542.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477834|gb|ACV58153.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 134
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+T F++ + + RQ + + NIANA TP Y+ +D++ FET+L +
Sbjct: 1 MTVFELLQNALDASTLRQAVYANNIANAETPGYKRQDVA-FETLLQNALSGQASGALGEA 59
Query: 64 ESDSSGLHWNAHVIEAP-------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ G + + P D +T V +GN V IT E+ + Y+ ++
Sbjct: 60 QIPIGGDAPSYDLNALPDVTPVVYTDPSTTVNSNGNNVDITEEMVLLAENQVRYDTLVQV 119
Query: 117 IKKLNSMVMHVVRG 130
I + + G
Sbjct: 120 ISGRLYSLRTAITG 133
>gi|95929846|ref|ZP_01312587.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
DSM 684]
gi|95134142|gb|EAT15800.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
DSM 684]
Length = 136
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH--ETHLKESD 66
+ + + Q+I++ N+ANA TP Y+AK + FE L Q T TH +
Sbjct: 13 LMKKSMDLRLRNQQIIAANVANAQTPGYQAKTFT-FEDALRQAATGKGTDMAVTHPQHIS 71
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G N + T NTV + E+ + +YE T+L+ K S+V +
Sbjct: 72 THGGSINNVTGTVGEIRDTSGMGDRNTVEVDQEMVNLAENQIMYEATTQLLNKKLSIVKY 131
Query: 127 VVRG 130
VV+G
Sbjct: 132 VVQG 135
>gi|77165841|ref|YP_344366.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
19707]
gi|76884155|gb|ABA58836.1| Flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
19707]
Length = 131
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETHL 62
I Q S R ++++ N+AN TP Y+A+DI F+ L Q + TH H+
Sbjct: 9 LGIYPQAVTLGSRRAEVLAANLANGDTPGYKARDI-DFKAALQQAQGQGLPLQATHAGHV 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S EA + GNTV E + Y+ + +
Sbjct: 68 SHSLG-----QFPGGEALYRIPQQASLDGNTVDSQVEHSEFMQNALQYQASLHFLSGKFK 122
Query: 123 MVMHVVRG 130
++ +RG
Sbjct: 123 GLLSALRG 130
>gi|327480017|gb|AEA83327.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri DSM
4166]
Length = 134
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + S+R ++++ NIANA TPNY+A+D+ F ++L + + +
Sbjct: 9 LGIHEKALGFRSQRAEVLANNIANADTPNYKARDL-DFSSVLAEQSAR---SQGGFGVAR 64
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A +E + NTV + E ++ + L+
Sbjct: 65 TSERHIAAEGLEIADASLRFRTPAHPSLDQNTVDLQIEQSNYAKNAVDFQASFTLLNSKF 124
Query: 122 SMVMHVVRG 130
+M +RG
Sbjct: 125 KGLMSALRG 133
>gi|300114802|ref|YP_003761377.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
C-113]
gi|299540739|gb|ADJ29056.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
C-113]
Length = 131
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHETHL 62
I Q S R +I++ N+AN TP Y+A+DI F+ L Q + TH HL
Sbjct: 9 LGIYPQAVTLGSRRAEILAANLANGDTPGYKARDI-DFKAALQQAQGQGLSLQATHAGHL 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S EA + GNTV E + Y+ + +
Sbjct: 68 SHSLG-----QFPGDEALYRIPQQASLDGNTVDSQVEHSEFMQNALQYQASLHFLSGKFK 122
Query: 123 MVMHVVRG 130
++ +RG
Sbjct: 123 GLLSALRG 130
>gi|291277449|ref|YP_003517221.1| putative flagellar basal-body rod protein [Helicobacter mustelae
12198]
gi|290964643|emb|CBG40497.1| putative flagellar basal-body rod protein [Helicobacter mustelae
12198]
Length = 146
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 18/132 (13%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------------NFLMAR 56
+ ++ S RQ +++ NIAN TP YR KDI FE L Q MA+
Sbjct: 15 FVYEALDYRSMRQDLIASNIANVDTPFYRPKDI-DFEHYLAQEKARIFDNKPHLELEMAQ 73
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T + HLK D+ + L + GN+V + E + G +Y+ T
Sbjct: 74 TSKNHLKGGDTQSYRPTTFFRDGHLARN-----DGNSVDLDVETSEMGKNSIMYQALTTA 128
Query: 117 IKKLNSMVMHVV 128
+KK + + +
Sbjct: 129 LKKHRGIFTYAI 140
>gi|325983735|ref|YP_004296136.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
gi|325533254|gb|ADZ27974.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
Length = 139
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---------RT 57
+ Q N + RQ++++ N+ANA TPN++A+DI F ++L + + T
Sbjct: 11 LNLYHQALNLRAARQELLASNVANADTPNFKARDI-DFSSVLREKLSLTTNITQVGLITT 69
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ S + L + + PL GNTV + E + Y++ LI
Sbjct: 70 SSGHISTSPAGILGGDNLLYRVPL----QPSADGNTVDMNMERTQFADNSIKYDVILTLI 125
Query: 118 KKLNSMVMHVVR 129
K + ++
Sbjct: 126 KDKFDDLSLAMQ 137
>gi|71906388|ref|YP_283975.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
gi|71846009|gb|AAZ45505.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
Length = 135
Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
Q ++ F SQ N ++R ++++ NIANA TPNY+A+D SFE+ + QN + R + +
Sbjct: 6 QELSVF---SQAMNLRTQRHQVLASNIANADTPNYKARDF-SFESAM-QNAMAGRGNGSV 60
Query: 62 LKESDSSG---LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ SSG N + + T V GNTV + E + Y++ ++LI
Sbjct: 61 ALATTSSGHLQGAGNGGLAALQFRRETQSAVDGNTVDMDVERSEISENALQYQIVSQLIS 120
Query: 119 KLNSMVMHVV 128
+ +
Sbjct: 121 DQFKGIRAAL 130
>gi|294013083|ref|YP_003546543.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum UT26S]
gi|292676413|dbj|BAI97931.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum UT26S]
Length = 122
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I + S+R +++ NIANASTP Y+A+DI FE+ L + + +
Sbjct: 6 GLFGIHGKALALRSQRLSLLASNIANASTPGYKARDI-DFESALKEATTRQGKSPADVSQ 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + + + GNTV ++ E Y ++ + +
Sbjct: 65 AVDDAMGYRV---------PLQSSLDGNTVELSTEQTLFAENAVKYRTTLSFLEGRINTI 115
Query: 125 MHVVRG 130
++G
Sbjct: 116 TRALKG 121
>gi|253996322|ref|YP_003048386.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis JLW8]
gi|253983001|gb|ACT47859.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis JLW8]
Length = 135
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+RQ++++ NIANA TPNY+A+D+ F + ++ +
Sbjct: 9 LSFHQNALRVRGQRQELIAANIANADTPNYKARDL-DFGAAMKSAMA-GAANKEAFNTNK 66
Query: 67 SSGLHWNAHVIE----APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+S H + A V GNTV + E + YE + +I
Sbjct: 67 TSDKHLDGIPSSIGGGAMFRPIVQGSVDGNTVDMDVERNQFADNAIRYEASIIMINGQLK 126
Query: 123 MVMHVVRG 130
++ ++G
Sbjct: 127 KMLAAIQG 134
>gi|152980267|ref|YP_001353108.1| FlgB flagellar basal body protein [Janthinobacterium sp. Marseille]
gi|151280344|gb|ABR88754.1| FlgB flagellar basal body protein [Janthinobacterium sp. Marseille]
Length = 139
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 16/137 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----------L 53
+ + +RQ+I++ NIANA TPN++A+D+ F L
Sbjct: 7 DMLRFQETALSLRGQRQQILASNIANADTPNFKARDV-DFNKALQGALARSKSGAAAPAE 65
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ +T THL SS T + GNTV + + + YE+
Sbjct: 66 LVKTSTTHL----SSKTLPTLGGAPLLYANTAQGNIDGNTVDMDVQRNQFTDNALRYEVG 121
Query: 114 TKLIKKLNSMVMHVVRG 130
L+ + ++G
Sbjct: 122 LTLVSSKIKGMFTAIQG 138
>gi|300693334|ref|YP_003749307.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum PSI07]
gi|299075371|emb|CBJ34666.2| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum PSI07]
Length = 175
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M
Sbjct: 29 QLFGFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKAVGQQSGSSLPMTA 87
Query: 57 THETHLKESDSSGLH-------------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
T HL + + +A E + + GNTV + E +
Sbjct: 88 TAAGHLTAAGAPAADVTPMQASLSAQSQADALQGEVQYRTSQQPSIDGNTVDMDGERMRF 147
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ ++ ++
Sbjct: 148 ADNTVRYEADLSIVTAKIKSMLAAIQ 173
>gi|187926957|ref|YP_001893302.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
gi|241665286|ref|YP_002983645.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
gi|187728711|gb|ACD29875.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
gi|240867313|gb|ACS64973.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
Length = 151
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q S+R +I++ NIANA TPNY+A+D F++ L + + M
Sbjct: 7 QLFGFQEQALRLRSQRHQILASNIANADTPNYKARDF-DFQSALQKAVGQQSGNSLPMTA 65
Query: 57 THETHLKESDSSGLH-----------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
T HL + A E + + GNTV + E +
Sbjct: 66 TAAGHLTVDGAPAGEVALMQASLSQQTKALQGEVQYRTSQQPSIDGNTVDMDGERMRFAD 125
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ + ++ ++
Sbjct: 126 NTVRYEADLNIVTQKIKSMLAAIQ 149
>gi|299068729|emb|CBJ39968.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum CMR15]
Length = 153
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M
Sbjct: 7 QLFDFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKATGQQSGNSLPMTA 65
Query: 57 THETH-------------LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
T H ++ S S+ + E + + GNTV + E +
Sbjct: 66 TAAGHLTAAGAQAGDVVPMQASLSAQSQADPLQGEVQYRTSQQPSIDGNTVDMDGERMRF 125
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ ++ ++
Sbjct: 126 ADNTVRYEADLSIVTAKIKSMLAAIQ 151
>gi|124268257|ref|YP_001022261.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
gi|124261032|gb|ABM96026.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
Length = 150
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMART 57
+Q SERQ++++ NIANA TP Y+A+D+ F L + ++ T
Sbjct: 23 NSLNFQTQALLLRSERQRLIASNIANADTPGYQARDM-DFGAALREATGAATPGNALSAT 81
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HL S ++G A + A QT + NTV + E YE + I
Sbjct: 82 QAGHL--SPTAGARSEAGLKYATPSQT---NLDSNTVDMDRERAAFADNAVHYEATLRFI 136
Query: 118 KKLNSMVMHVVRG 130
++ + G
Sbjct: 137 NGSVRTMLSAITG 149
>gi|146281768|ref|YP_001171921.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri A1501]
gi|145569973|gb|ABP79079.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri A1501]
Length = 134
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + S+R ++++ NIANA TPNY+A+D+ F ++L + + +
Sbjct: 9 LGIHEKALGFRSQRAEVLANNIANADTPNYKARDL-DFGSVLAEQSAQGQ---GGFAATR 64
Query: 67 SSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A +E + NTV + E ++ + L+
Sbjct: 65 TSDRHIAAEGLEIADASLRFRTPAHPSLDQNTVDLQIEQSNYAKNAVDFQASFTLLNSKF 124
Query: 122 SMVMHVVRG 130
+M +RG
Sbjct: 125 QGLMSALRG 133
>gi|91976171|ref|YP_568830.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisB5]
gi|91682627|gb|ABE38929.1| putative flagellar basal-body rod protein FlgB [Rhodopseudomonas
palustris BisB5]
Length = 136
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ ++ W ERQK++SEN++N+ TPN++ +D+ + + A T
Sbjct: 3 VNDLSMLAALRTKMQWHQERQKVLSENVSNSDTPNFQPRDLVE-PKFDSTGRVTASTSGG 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
L +S H + + +GN V + +++ K + Y T L
Sbjct: 62 ALPMMMTSTSHLKPPGGTVSFSEDRRIGFQTRPAGNAVTLEDQMMKVSANQMDYAAATSL 121
Query: 117 IKKLNSMVMHVV 128
+ ++ +
Sbjct: 122 YSRSLGLIKTAI 133
>gi|118581823|ref|YP_903073.1| flagellar basal-body rod protein FlgB [Pelobacter propionicus DSM
2379]
gi|118504533|gb|ABL01016.1| flagellar basal-body rod protein FlgB [Pelobacter propionicus DSM
2379]
Length = 140
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTH 58
+ I S++ + +++ +VS NIANA TPNY K + FE L + T+
Sbjct: 9 STIDILSKNIDLRAKQHNLVSSNIANAETPNYVPKALV-FEDELQGAIKGNPTTTGSTTN 67
Query: 59 ETHLKESDSSGL--HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
H+ G VIE+P GN V + E+ + + LY + ++
Sbjct: 68 PRHIPLKGGGGTIHSVQGQVIESPAKTPGK---DGNAVELEGEMSRMVENQILYNASVQI 124
Query: 117 IKKLNSMVMHVVRG 130
+ K + ++G
Sbjct: 125 LTKKFEGLRTAIKG 138
>gi|319649570|ref|ZP_08003726.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
gi|317398732|gb|EFV79414.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
Length = 131
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFLMARTHETHLKE 64
+ ++ S +QK++S+NIANA TPNY+AKD S +F++ L + ++ H
Sbjct: 9 STLEKALDYSSLKQKVISQNIANADTPNYKAKDASFKEAFQSALEGSMEANKSDIRHYDF 68
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN+V + E+ + + Y + + S +
Sbjct: 69 KNGLSSAQGVITKR-----NASYNHNGNSVDVDKEMAELATNQIYYNAVIERVSGKFSSL 123
Query: 125 MHVVRG 130
+V+RG
Sbjct: 124 QNVLRG 129
>gi|330860609|emb|CBX70906.1| flagellar basal-body rod protein flgB [Yersinia enterocolitica
W22703]
Length = 96
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
++RQ+I+S NIANA TP ++A+DI F + L + R T + S +S H A
Sbjct: 2 RAQRQEILSSNIANADTPGFQARDI-DFSSQLKKVMEQGRASGTGVSLSLTSARHIPAST 60
Query: 77 IEAP-----LDQTTGVQVSGNTVGITNEL 100
++ P + GNTV + E
Sbjct: 61 VQPPDLDLLFRVPDQPSMDGNTVDMDRER 89
>gi|316932833|ref|YP_004107815.1| flagellar basal body rod protein [Rhodopseudomonas palustris DX-1]
gi|315600547|gb|ADU43082.1| flagellar basal body rod protein [Rhodopseudomonas palustris DX-1]
Length = 136
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---------SSFETILNQN 51
+ + W +RQ+++++NIAN+ TP ++ D+ +
Sbjct: 3 INDLPTLAALRTRMQWHQQRQRVLADNIANSDTPGFKPLDLVAPTFDPSGRPTAGSPVGS 62
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
M RT H+ S + + +GN V + +E+ K + Y
Sbjct: 63 LPMMRTSAVHIAPSGGTESFSQDR------RGGMQTRPAGNAVNLEDEMLKVSSNQGGYA 116
Query: 112 LNTKLIKKLNSMVMHVV 128
T L + ++ +
Sbjct: 117 AATALYTRSLGVLKTAI 133
>gi|205373368|ref|ZP_03226172.1| flagellar basal body rod protein FlgB [Bacillus coahuilensis m4-4]
Length = 133
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKE 64
Q N+ +++QK +S+NIAN TPNY+AKD+ FE+ ++ T + H+
Sbjct: 10 QSLEAGLNYSTDKQKAISQNIANVDTPNYKAKDVK-FESYFKKSVADIQANVTSDKHMSF 68
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+S +A + +GN V + E+ + Y + + SM+
Sbjct: 69 KPTSATGTSAAPYSS---SDFIYHHNGNGVDVDKEMADLATNQIYYNSLIQQLNHKYSMI 125
Query: 125 MHVVRG 130
VV+G
Sbjct: 126 TTVVKG 131
>gi|291334309|gb|ADD93970.1| predicted flagellar proximal rod protein [uncultured marine
bacterium MedDCM-OCT-S09-C247]
Length = 146
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++ ++ N S+R +I++ NIAN++TPN++AKD+ FE +LN + + T+ + D
Sbjct: 26 LRVHAEALNLRSQRNEILASNIANSATPNFKAKDL-DFEALLNSRMGFGKVNTTNSRHFD 84
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S + Q GNTV + E + Y+ + + + + + +M
Sbjct: 85 IS---IGPNEEGVKFRQNVTPSKDGNTVELHVEQLQFSENVMRYQTSLEFLNRKIAGLMS 141
Query: 127 VVRG 130
++G
Sbjct: 142 AIKG 145
>gi|259907631|ref|YP_002647987.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
gi|224963253|emb|CAX54737.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
gi|283477473|emb|CAY73389.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
12163]
Length = 135
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + LS RQ++++ NIANA TP Y A+DI F L ++ + S
Sbjct: 9 FLFQQEALSLLSRRQEVLASNIANADTPGYMARDI-DFSQQLKNTLANQSMAKSPVSLSL 67
Query: 67 SSGLHWNAHVI-----EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H GNTV + E Y+ +
Sbjct: 68 TAEKHIEGKGRLFDDANLLYRTPDQPSADGNTVDMDRERIGMADTNVKYQSGLTFLGADI 127
Query: 122 SMVMHVV 128
+M V+
Sbjct: 128 KKMMSVL 134
>gi|83647176|ref|YP_435611.1| flagellar basal body rod protein FlgB [Hahella chejuensis KCTC
2396]
gi|83635219|gb|ABC31186.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396]
Length = 131
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 14/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
I Q N + R ++++ NIANA TP +RA+DI F+ +L Q + + T +
Sbjct: 9 LGIHEQALNVRTRRAEVLANNIANADTPGFRARDI-DFKAVLRQAKSIEDSLEVVTTDDA 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + Q + GNTV E+ + ++ + + +
Sbjct: 68 HMAIKTPAEGAL-------LYRQPLQPSIDGNTVDTQTEIVQYSKNALDFQASFEFLNSR 120
Query: 121 NSMVMHVVRG 130
++ ++G
Sbjct: 121 LKGIVSAIKG 130
>gi|149202211|ref|ZP_01879184.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
gi|149144309|gb|EDM32340.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
Length = 128
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N +R +++ NIANA+TP ++A+D+ FET+LN ++ +
Sbjct: 9 LSLFASALNLREQRGAMLASNIANAATPGFKARDM-DFETVLNAETGGGALATSNGRHFA 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+SGL+ P++ + + GNTV + E + Y+ + L+ + S +
Sbjct: 68 TSGLNAGQAGYRVPVNPS----LDGNTVELAVEQMEFAENSLRYQTSLTLLNRRISGLNT 123
Query: 127 VVRG 130
++G
Sbjct: 124 AIKG 127
>gi|300696910|ref|YP_003747571.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum CFBP2957]
gi|299073634|emb|CBJ53154.1| flagellar component of cell-proximal portion of basal-body rod,
protein flgb [Ralstonia solanacearum CFBP2957]
Length = 153
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 22/146 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M
Sbjct: 7 QLFSFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKATGQQSGSSLPMTA 65
Query: 57 THETHLKESDSSGLH-------------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
T HL + + +A E + + GNTV + E +
Sbjct: 66 TAAGHLTAAGAPAADVVPMQASLSAQSQADALQGEVEYRTSQQPSIDGNTVDMDGERMRF 125
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ ++ ++
Sbjct: 126 ADNTVRYEADLSIVTAKIKSMLAAIQ 151
>gi|17548563|ref|NP_521903.1| flagellar basal-body rod protein FlgB [Ralstonia solanacearum
GMI1000]
gi|17430811|emb|CAD17493.1| probable flagellar basal-body rod protein flgb [Ralstonia
solanacearum GMI1000]
Length = 165
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 22/146 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M
Sbjct: 19 QLFGFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKAAGQQSGNSLPMTA 77
Query: 57 THETHLKESDSSGLH-------------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
T HL + + + E + + GNTV + E +
Sbjct: 78 TAAGHLTAAGAPAGDVVPMQASLSAQSKADPLQGEVQYRTSQQPSIDGNTVDMDGERMRF 137
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ ++ ++
Sbjct: 138 ADNTVRYEADLSIVTAKIKSMLAAIQ 163
>gi|188997546|ref|YP_001931797.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932613|gb|ACD67243.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 122
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +++ ER K++ NIANA+TP Y+ D++ FE +LN ++ T E H++
Sbjct: 5 LDKINTMSSFYFERTKVIQGNIANANTPFYKPVDLT-FEEVLNYQTVLKTTDERHIQP-- 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N + P N V + E+ K +Y+ +++KK S +
Sbjct: 62 ----EPNNFIKIKPYQNGIITGYDQNKVNVEEEMAKLAESSIMYKSLVEVMKKELSKMKL 117
Query: 127 VVRG 130
+ G
Sbjct: 118 AISG 121
>gi|310764863|gb|ADP09813.1| Flagellar basal-body rod protein FlgB [Erwinia sp. Ejp617]
Length = 147
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + LS RQ++++ NIANA TP Y A+DI F L ++ + S
Sbjct: 21 FLFQQEALSLLSRRQEVLASNIANADTPGYMARDI-DFSQQLKNTLANQSMAKSPVSLSL 79
Query: 67 SSGLHWNAHVI-----EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H GNTV + E Y+ +
Sbjct: 80 TAEKHIEGKGRLFDDANLLYRTPDQPSADGNTVDMDRERIGMADTNVKYQSGLTFLGADI 139
Query: 122 SMVMHVV 128
+M V+
Sbjct: 140 KKMMSVL 146
>gi|296274028|ref|YP_003656659.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM
7299]
gi|296098202|gb|ADG94152.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM
7299]
Length = 135
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMA 55
M+P ++ ++ +ERQK++S NIAN +TP+Y+ KD+ SFE+ L ++ +
Sbjct: 1 MKPSNVSELLFNTLSYRAERQKVISSNIANINTPDYKTKDL-SFESQLQEKNRQKDLQLI 59
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T++ H+K +++ + V E + Q GN V + ++ + +++
Sbjct: 60 TTNQNHIKSKENNDKNPRMEVYEV---ENLQEQNDGNNVNLDTQMSEMAKNNTMFQAIQG 116
Query: 116 LIKKLNSMVMHVV 128
I+K + V+
Sbjct: 117 SIRKDVTFFTSVI 129
>gi|117923582|ref|YP_864199.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
gi|117607338|gb|ABK42793.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
Length = 137
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------FLMARTHETHLKESDS 67
+ RQ I++ NIANA TP Y+A+ + SFE L ++ MAR+ HL
Sbjct: 18 LDLRQRRQDIIAANIANADTPGYKARRL-SFEEELAKSTPRDGDLPMARSDPRHLPAQGF 76
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+E P+ + N+V + E+ + + LY T+ + + +
Sbjct: 77 LAASGEIQEVETPIS-----KGDMNSVDMEQEMARQTANQLLYNYATQSLNGQITKMKMA 131
Query: 128 VRG 130
+RG
Sbjct: 132 IRG 134
>gi|226939377|ref|YP_002794450.1| FlgB [Laribacter hongkongensis HLHK9]
gi|226714303|gb|ACO73441.1| FlgB [Laribacter hongkongensis HLHK9]
Length = 154
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--------NQNFLMARTH 58
F + + R ++++ NIANA TPNY+A D F + + +++T
Sbjct: 26 FNFQEKALGLHARRNEVIASNIANADTPNYKAVDF-DFAKAMKSALAGDSRSSLALSQTD 84
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL + +E Q + GNTV + E Y+ +
Sbjct: 85 NRHLAGKQT---QQGTDGVEVEYRQAVQPSIDGNTVDMDVERSAFMDNSLRYQSTLTFLN 141
Query: 119 KLNSMVMHVVRG 130
+ S + ++G
Sbjct: 142 RRISGLSDAIKG 153
>gi|224373714|ref|YP_002608086.1| flagellar basal body rod protein FlgB [Nautilia profundicola AmH]
gi|223588710|gb|ACM92446.1| flagellar basal-body rod protein FlgB [Nautilia profundicola AmH]
Length = 143
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 17/134 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------------FLM 54
F I + ++ RQ +++ NIANA TP YR KDI FE L +
Sbjct: 9 FDILEKSLHYRKIRQDMIASNIANADTPYYRPKDIR-FEEALQAEVDKKFNIRTAPKLEL 67
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A+T H+ D S + GN+V I E + Y
Sbjct: 68 AKTEPGHMAAPDESSDAKPIVFYR----DGHLARNDGNSVDIDVETTEMAKNNIAYNAAI 123
Query: 115 KLIKKLNSMVMHVV 128
+ ++K + V+
Sbjct: 124 QALRKDIDIFKAVI 137
>gi|308185346|ref|YP_003929479.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180]
gi|308061266|gb|ADO03162.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180]
Length = 140
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK M+ + +
Sbjct: 116 YLALSSALKKYRGMINYAI 134
>gi|163750573|ref|ZP_02157811.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
gi|161329728|gb|EDQ00717.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
Length = 132
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
+ ++R ++++ NIANA TP+Y+A+D+ +F+ L M+R+
Sbjct: 9 LGVHQYTLGIRAKRAEVIASNIANADTPHYKARDV-NFDKALQAATSRQGGLAMSRSDSR 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + S ++ P TG GNTV + E + Y+++ +
Sbjct: 68 HFDLTALSQQNYG---YRVPNQPDTG---DGNTVDMQKEQSEFMKNALEYQMSLGFLDGK 121
Query: 121 NSMVMHVVRG 130
S + +RG
Sbjct: 122 FSGMKKALRG 131
>gi|294084421|ref|YP_003551179.1| flagellar basal-body rod protein FlgB [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663994|gb|ADE39095.1| flagellar basal-body rod protein FlgB [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 128
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ Q+ S + S+R I++ NIANA+TPN++A+DI +FE +++ + +
Sbjct: 6 DYLQVHSAALSLRSKRNDILASNIANAATPNFKARDI-NFEDEISRVAGYGTMDGSDARH 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
++ N + Q + GNTV + E + Y+ + + + +
Sbjct: 65 IRTA---VNGRPDQVLYRQPLNPSLDGNTVELNVEQMEFSENVMRYQTSLTFLNNRITGL 121
Query: 125 MHVVRG 130
M +RG
Sbjct: 122 MSAIRG 127
>gi|241766917|ref|ZP_04764723.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii 2AN]
gi|241362621|gb|EER58469.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii 2AN]
Length = 147
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 46/138 (33%), Gaps = 14/138 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK-ES 65
+ERQ+ ++ NIANA TP Y A+D + ET+ + T HL
Sbjct: 9 LDFHGNALMLRAERQRAIASNIANADTPGYVARDFNFAETLREATGAGSATSAAHLASGG 68
Query: 66 DSSGLHWNAHVIEAPLDQ-------------TTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + I P T + NTV + E YE
Sbjct: 69 AGTAGTTDPRHIPLPTASLGGGARGTLGYGVQTQPSLDNNTVDLDRERANFVDNAVRYEA 128
Query: 113 NTKLIKKLNSMVMHVVRG 130
+ I ++ ++G
Sbjct: 129 TLRFINGQAKTMLSAIQG 146
>gi|6502600|gb|AAF14367.1|AF133240_1 flagellar proximal rod protein FlgB [Rhodobacter sphaeroides]
Length = 128
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +Q R +++ NIANA+TP+Y+A+DI F L + T +
Sbjct: 8 LGVHAQALVLRETRNNLLTSNIANAATPHYKARDI-DFGAELARASGNGTVRTTEARHFA 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G A EA + GNTV + E + Y+ + L+ + S +M
Sbjct: 67 AGG---PAARGEALYRDPVSPSLDGNTVEMAVEQMEFAENTLRYQTSLALLNRRISGLMT 123
Query: 127 VVRG 130
++G
Sbjct: 124 AIKG 127
>gi|119775453|ref|YP_928193.1| flagellar basal body rod protein FlgB [Shewanella amazonensis SB2B]
gi|119767953|gb|ABM00524.1| flagellar basal-body rod protein FlgB [Shewanella amazonensis SB2B]
Length = 132
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
+ +ER +++S NIANA TP+Y+A+D+ +F L + MA+T E
Sbjct: 9 LGVHQFTLGIRAERAEVLSSNIANADTPHYKARDV-NFADALQAARSQQRGMQMAQTSEG 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H S H P TG GNTV I E Y+++ ++
Sbjct: 68 HFDLQALSRQHVQ---FRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLEGK 121
Query: 121 NSMVMHVVRG 130
+ + ++G
Sbjct: 122 FNGMKKAIKG 131
>gi|34498343|ref|NP_902558.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
ATCC 12472]
gi|34104197|gb|AAQ60556.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
ATCC 12472]
Length = 137
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 12/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTH 58
+F + N + R +++ N+ANA TP Y+A D F++ L +A T
Sbjct: 7 HYFDFQQRALNLQAYRAEVIGSNVANAETPYYKAVDF-DFKSALQAQVDKQGQLGLALTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ A ++ + GNTV + E Y+ +
Sbjct: 66 ARHIANQTGG-----AAGVQLQYRSAVQPSLDGNTVDMDIERGAFADNALQYQSTLAFLN 120
Query: 119 KLNSMVMHVVRG 130
K S + ++G
Sbjct: 121 KKISGLNSAIQG 132
>gi|126462487|ref|YP_001043601.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
17029]
gi|332558511|ref|ZP_08412833.1| FlgB [Rhodobacter sphaeroides WS8N]
gi|126104151|gb|ABN76829.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
17029]
gi|332276223|gb|EGJ21538.1| FlgB [Rhodobacter sphaeroides WS8N]
Length = 128
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +Q R +++ NIANA+TP+Y+A+DI F L + T +
Sbjct: 8 LGVHAQALVLRETRNNLLTSNIANAATPHYKARDI-DFGAELARASGNGTLRTTEARHFA 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G A EA + GNTV + E + Y+ + L+ + S +M
Sbjct: 67 AGG---PAARGEALYRDPVSPSLDGNTVEMAVEQMEFAENTLRYQTSLALLNRRISGLMT 123
Query: 127 VVRG 130
++G
Sbjct: 124 AIKG 127
>gi|77463655|ref|YP_353159.1| flagellar proximal rod protein FlgB [Rhodobacter sphaeroides 2.4.1]
gi|77388073|gb|ABA79258.1| Flagellar proximal rod protein FlgB [Rhodobacter sphaeroides 2.4.1]
Length = 128
Score = 86.5 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +Q R +++ NIANA+TP+Y+A+DI F L + T +
Sbjct: 8 LGVHAQALVLRETRNNLLTSNIANAATPHYKARDI-DFGAELARASGNGTLRTTEARHFA 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G A EA + GNTV + E + Y+ + L+ + S +M
Sbjct: 67 AGG---PAARGEALYRDPVTPSLDGNTVEMAVEQMEFAENTLRYQTSLALLNRRISGLMT 123
Query: 127 VVRG 130
++G
Sbjct: 124 AIKG 127
>gi|222053599|ref|YP_002535961.1| flagellar basal-body rod protein FlgB [Geobacter sp. FRC-32]
gi|221562888|gb|ACM18860.1| flagellar basal-body rod protein FlgB [Geobacter sp. FRC-32]
Length = 140
Score = 86.5 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTHETH 61
I + + ++ +S N+ANA TP Y + SFE+ L A TH H
Sbjct: 12 DILGKSLDLRAKNHNHISANVANAETPGYMPTRL-SFESELKDAVKGKGIGKGAVTHPRH 70
Query: 62 --LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
LK S V+E P V + N V + NE+ K + +Y + +L+ K
Sbjct: 71 IPLKGKGGSVEEVAGTVVETPAKS---VGMDNNAVELENEMGKMAENQIMYNASVQLLGK 127
Query: 120 LNSMVMHVVRG 130
+ + ++G
Sbjct: 128 KFEGLKYAIKG 138
>gi|15612532|ref|NP_224185.1| flagellar basal body rod protein FlgB [Helicobacter pylori J99]
gi|4156088|gb|AAD07041.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
Length = 140
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----------- 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE++L
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDL-DFESVLAEKKAEIFENQS 59
Query: 50 -QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+ +A T+ HL +S+ + + L + GN+V + E + G
Sbjct: 60 GKVLPLAHTNPRHLDFENSTKNGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNST 114
Query: 109 LYELNTKLIKKLNSMVMHVV 128
+Y + +KK M+ + +
Sbjct: 115 MYLALSSALKKYRGMINYAI 134
>gi|322421738|ref|YP_004200961.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18]
gi|320128125|gb|ADW15685.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18]
Length = 139
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHE 59
++ + + ++R ++S N+AN TP Y A DI SFE L TH
Sbjct: 9 NTVELLGKTLDLRAKRHTMISANLANVETPGYTASDI-SFEGQLKSALKEGPKSGGVTHP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H++ + L + + GN V + +E+ + + +Y + +++ K
Sbjct: 68 RHIQLKGGAASLEKVQGDLVDLSSRS-MGPDGNGVEMESEMGRLAENQIMYNASVQILAK 126
Query: 120 LNSMVMHVVRG 130
+ +RG
Sbjct: 127 KFEELKQAIRG 137
>gi|294140181|ref|YP_003556159.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
gi|293326650|dbj|BAJ01381.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
Length = 132
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 15/133 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ ++R ++++ NIANA TP+Y+A+D++ ++ A + + L
Sbjct: 7 NALGVHQYTLGIRAQRAEVIASNIANADTPHYKARDVN-----FDKALQAASSRQGGLAM 61
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S S H++ P TG GNTV + E + Y+++ +
Sbjct: 62 SSSDSRHFDLEALSQQNYGYRVPNQPDTG---DGNTVDMQKEQSEFMQNALEYQMSLGFL 118
Query: 118 KKLNSMVMHVVRG 130
S + +RG
Sbjct: 119 DGKFSGLKKAIRG 131
>gi|86750886|ref|YP_487382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
HaA2]
gi|86573914|gb|ABD08471.1| flagellar basal-body rod protein FlgB [Rhodopseudomonas palustris
HaA2]
Length = 145
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ + W ERQK+++EN++N+ TP ++ +D+ + + L A +
Sbjct: 12 INDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVA-PKFNSAGQLTASSAGG 70
Query: 61 HLKESDSSGLHWNAHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
L +S H A + + +GN V + +++ K + Y T L
Sbjct: 71 ALPMMMTSASHMKAPGGAVSFAEDRRAGFQTRPAGNAVNLEDQMMKVSANQMDYAAATSL 130
Query: 117 IKKLNSMVMHVV 128
+ ++ +
Sbjct: 131 YTRSLGLLKTAI 142
>gi|134095100|ref|YP_001100175.1| basal-body rod protein [Herminiimonas arsenicoxydans]
gi|133739003|emb|CAL62051.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
protein) [Herminiimonas arsenicoxydans]
Length = 139
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 16/137 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----------QNFL 53
+ + ++RQ++++ NIANA TPN++A+DI F L
Sbjct: 7 DLMRFQETALSLRAQRQQLLASNIANADTPNFKARDI-DFNKALQGAIAKSAGGAAAPAA 65
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ +T HL SS H T + GNTV + + + YE++
Sbjct: 66 LVKTTTAHL----SSNTHATIGGAPLLYSNTQQGNIDGNTVDMDVQRNQFTDNAMRYEVS 121
Query: 114 TKLIKKLNSMVMHVVRG 130
L ++ ++G
Sbjct: 122 VTLASSKIKGMLTAIQG 138
>gi|121596114|ref|YP_988010.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
gi|120608194|gb|ABM43934.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
Length = 151
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
SERQ+ ++ NIANA TP Y A+D F + +S
Sbjct: 22 LDFHGSALLLRSERQRAIASNIANADTPGYVARDFK-FADAMRAVNEAQAPSPLR-SQSV 79
Query: 67 SSGLHWNAHVIEAPLDQT-------TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S H + + T + NTV + E YE + I
Sbjct: 80 SDPRHIPLPAAASGSSDSTLGYALQTQPSLDNNTVDMDRERAAFVDNAVRYEATLRFING 139
Query: 120 LNSMVMHVVRG 130
+ ++ ++G
Sbjct: 140 QSKTMLSAIQG 150
>gi|221639498|ref|YP_002525760.1| Flagellar proximal rod protein FlgB [Rhodobacter sphaeroides KD131]
gi|221160279|gb|ACM01259.1| Flagellar proximal rod protein FlgB [Rhodobacter sphaeroides KD131]
Length = 128
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +Q R +++ NIANA+TP+Y+A+DI F L + T +
Sbjct: 8 LGVHAQALVLRETRNNLLTSNIANAATPHYKARDI-DFGAELARASGTGTLRTTEARHFA 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
G A EA + GNTV + E + Y+ + L+ + S +M
Sbjct: 67 VGG---PAARGEALYRDPVTPSLDGNTVEMGVEQMEFAENTLRYQTSLALLNRRISGLMT 123
Query: 127 VVRG 130
++G
Sbjct: 124 AIKG 127
>gi|182412251|ref|YP_001817317.1| flagellar basal-body rod protein FlgB [Opitutus terrae PB90-1]
gi|177839465|gb|ACB73717.1| flagellar basal-body rod protein FlgB [Opitutus terrae PB90-1]
Length = 144
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-FETILNQNFLMARTHETHLKES 65
+Q+A + + RQ+ ++ N+ANA TP Y DI+ FE L + E
Sbjct: 25 YQLARKLLDAAVLRQEAIASNVANAETPGYHRLDIAPDFEAQLKSSLAAG--------EL 76
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+SG ++E ++ ++ GNTV I EL +E T+L+ +
Sbjct: 77 GTSGERLKPRLVEDLTARS--LRPDGNTVEIERELLAMNKNAVQHEYLTELVSNNLRQLR 134
Query: 126 HVVRG 130
+ G
Sbjct: 135 MAITG 139
>gi|284007176|emb|CBA72462.1| flagellar basal body rod protein FlgB [Arsenophonus nasoniae]
Length = 135
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
Q + +RQ I+S NIA+A TP Y+A+DI F L +N + + L +
Sbjct: 9 LSFQQQALSLRHQRQAILSANIAHADTPGYQARDI-DFSAQLEKNLMANSVTDKQLSMTV 67
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H + V + GNTV + E Y+ + ++
Sbjct: 68 TSVNHIAVQPANSLTADLLYRVPHQVAMDGNTVDMDMERSHFADNSVKYQTDLSILNGQI 127
Query: 122 SMVMHVVR 129
+M V++
Sbjct: 128 KSMMAVMQ 135
>gi|307293790|ref|ZP_07573634.1| flagellar basal-body rod protein FlgB [Sphingobium chlorophenolicum
L-1]
gi|306879941|gb|EFN11158.1| flagellar basal-body rod protein FlgB [Sphingobium chlorophenolicum
L-1]
Length = 122
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I + S+R +++ NIANASTP Y+A+DI FE+ L + T
Sbjct: 6 GLFGIHGKALALRSQRLSLLASNIANASTPGYKARDI-DFESALKE-----ATSRQGKSA 59
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+D S ++ PL + GNTV ++ E Y ++ + +
Sbjct: 60 ADVSQAVDDSMGYRVPL----QSSLDGNTVELSTEQTLFAENAVKYRTTLSFLEGRINTI 115
Query: 125 MHVVRG 130
++G
Sbjct: 116 NRALKG 121
>gi|77918799|ref|YP_356614.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus DSM
2380]
gi|77544882|gb|ABA88444.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus DSM
2380]
Length = 141
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQN 51
M I F + S+ + ++Q++++ NIAN+ TP Y +S E + NQ+
Sbjct: 1 MSEIRIFDRTINVLSKVLDLRQQKQELIASNIANSQTPGYIPVQLSFEEDLARALQNNQS 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ + H + + + + G+ GN V + +L + LYE
Sbjct: 61 APGQPSDQPHPRHIPIAAGGLDTLQGQIQRRPDQGLSNDGNGVDLDKQLIAQSENQLLYE 120
Query: 112 LNTKLIKKLNSMVMHVVR 129
T+++ K S + +V +
Sbjct: 121 TTTQILSKKLSTLKYVCQ 138
>gi|152997585|ref|YP_001342420.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1]
gi|150838509|gb|ABR72485.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1]
Length = 130
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLK 63
F + + S R +++ NIANA TPNY+A+DI SF++ LN + +A T+ H+
Sbjct: 9 FAGHDKTLEFRSARAAVLANNIANADTPNYKARDI-SFDSFLNNESKKLQLAGTNSRHIS 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S A + GNTV + E + ++ + + + +
Sbjct: 68 GEGFSDEPEGLLYRNA-----NQPSLDGNTVDMQREQAEYAQNSLQFDTSFMFLDRKING 122
Query: 124 VMHVVRG 130
+ + G
Sbjct: 123 MKKALTG 129
>gi|254516986|ref|ZP_05129044.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
NOR5-3]
gi|219674491|gb|EED30859.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
NOR5-3]
Length = 135
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I+ Q +++ ++++ NIAN+ TP Y+A+DI + N + TH
Sbjct: 13 LGISPQVLALRAQKTELLAANIANSDTPGYKARDIDFSAAMANASGAQEALTRTHAAHLS 72
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+SG N +E T + GNTV E + Y+ + L+ + +
Sbjct: 73 TSGTPGN---VEPMYRVPTQPSLDGNTVESQREHAEFMDNAMRYQASLNLLDGRINSLRT 129
Query: 127 VVRG 130
+RG
Sbjct: 130 AIRG 133
>gi|188592114|ref|YP_001796712.1| flagellar basal body rod protein flgb [Cupriavidus taiwanensis LMG
19424]
gi|170938488|emb|CAP63475.1| FlgB: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
19424]
Length = 135
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + ++RQ +++ NIA+A TP Y+A+D F + L Q +E + S
Sbjct: 9 LRFQQEALSLRNQRQSVIASNIAHADTPGYKARDF-DFSSTLAQTVERGHRNEG-MSLST 66
Query: 67 SSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + V GNTV + E +E ++
Sbjct: 67 TSVRHLPAQAPGREEFDLAYRIPLQSSVDGNTVEMDTERVAFADNAVHFESGLTVMNSKI 126
Query: 122 SMVMHVVR 129
++ ++
Sbjct: 127 KTMLAAIQ 134
>gi|319944138|ref|ZP_08018416.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
51599]
gi|319742632|gb|EFV95041.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
51599]
Length = 154
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 21/144 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE------- 59
+ + RQ+ ++ NIANA TPN++AKD F L + M +
Sbjct: 11 LDFHGRALQLRASRQETIASNIANADTPNFKAKDF-DFGAALREASGMPASDAGSSAALP 69
Query: 60 -------------THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
TH G + + + GNTV + E +
Sbjct: 70 AAEGGLSTVALARTHRGHQQLGGALKSGGKPDLKYVHPEQPSMDGNTVDLNRERAQFSQN 129
Query: 107 KYLYELNTKLIKKLNSMVMHVVRG 130
YE + + + +M +RG
Sbjct: 130 AVGYEASLRFLNGRIKTMMTAIRG 153
>gi|310816826|ref|YP_003964790.1| flagellar basal-body rod protein FlgB, putative [Ketogulonicigenium
vulgare Y25]
gi|308755561|gb|ADO43490.1| flagellar basal-body rod protein FlgB, putative [Ketogulonicigenium
vulgare Y25]
Length = 126
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 11/132 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF---LMARTH 58
Q + F A+ A S+R + NIANA TP YRA+ I F + +T
Sbjct: 3 QNLALFGTAADMAAHASQRINQTAINIANADTPGYRAQTIGGFAEAYAGALPGSALRQTR 62
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
HL + + +E +GN+V + E + + + + +
Sbjct: 63 AHHLAGDGLAPTNIQRAAVEE--------SPNGNSVSLELETLAAIDAQREHNQALSIYR 114
Query: 119 KLNSMVMHVVRG 130
+M+ + G
Sbjct: 115 HGLTMLRTAIGG 126
>gi|91792661|ref|YP_562312.1| flagellar basal body rod protein FlgB [Shewanella denitrificans
OS217]
gi|91714663|gb|ABE54589.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans
OS217]
Length = 132
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+ S+R +++S NIANA+TP+Y+A+D+ F + + + M+ T
Sbjct: 7 NALGVHQYSLGIRSQRAEVLSSNIANANTPHYKAQDV-DFASAMQSARSHQKGLSMSNTS 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H + + H P TG GNTV I E Y+++ ++
Sbjct: 66 EKHFDLTSLTQQHIK---YRVPNQPDTG---DGNTVDIQKEQSSFMQNALEYQMSLGFLE 119
Query: 119 KLNSMVMHVVRG 130
S + +RG
Sbjct: 120 GKFSGMRKALRG 131
>gi|281417194|ref|ZP_06248214.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
JW20]
gi|281408596|gb|EFB38854.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
JW20]
Length = 134
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKE 64
+ + + R + +S+NIAN TP Y+ K ++ FE LN RT H+
Sbjct: 10 DVLEKSLDAALLRNEAISQNIANVDTPGYKRKTVA-FEEYLNDARAKIKGIRTRPEHIPV 68
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + V E + +++ N V I E+ + Y L T+ I + +
Sbjct: 69 GARDVMDIDIKVSED--RSSLSMRLDENNVDIEEEMAQMAKNTIKYYLLTQKISGDFNKI 126
Query: 125 MHVVR 129
VV+
Sbjct: 127 KSVVK 131
>gi|94495414|ref|ZP_01301994.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
gi|94424802|gb|EAT09823.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
Length = 123
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I + S+R +++ NIANASTP Y+A+DI FE L + A +
Sbjct: 6 NLFGIHGKALALRSQRLSLLASNIANASTPGYKARDI-DFEAALKE----ATAQSSGATS 60
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+D +A PL + GNTV ++ E Y ++ + +
Sbjct: 61 TDMGKAVEDAMGYRVPL----QPSLDGNTVELSTEQTLFAENAVKYRTTLSFLEGRINTI 116
Query: 125 MHVVRG 130
++G
Sbjct: 117 NRALKG 122
>gi|85710161|ref|ZP_01041226.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
gi|85688871|gb|EAQ28875.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
Length = 117
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T F I S+R +++ NIANA+TP ++A+D+ F LN R
Sbjct: 4 TIFGIHGAALELRSQRMGVIASNIANAATPGFKARDM-DFNAALNARLETQR-------- 54
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
G E ++ + GNTV ++ E Y ++ S +
Sbjct: 55 ----GAPAAFGEPELLYRRSAMPTLDGNTVELSREQVAFAENALAYSATLSFVQGKVSTI 110
Query: 125 MHVVRG 130
++G
Sbjct: 111 TRALKG 116
>gi|256004780|ref|ZP_05429755.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM
2360]
gi|255991230|gb|EEU01337.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM
2360]
gi|316940781|gb|ADU74815.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM
1313]
Length = 134
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKE 64
+ + + R + +S+NIAN TP Y+ K ++ FE LN RT H+
Sbjct: 10 DVLEKSLDAALLRNEAISQNIANVDTPGYKRKTVA-FEEYLNDARAKIKGIRTRPEHIPV 68
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + V E + +++ N V I E+ + Y L T+ I + +
Sbjct: 69 GARDVMDIDIKVSED--RSSLSMRLDENNVDIEEEMAQMAKNTIKYYLLTQKISGDFNKI 126
Query: 125 MHVVR 129
V++
Sbjct: 127 KSVIK 131
>gi|212634345|ref|YP_002310870.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
WP3]
gi|212555829|gb|ACJ28283.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
WP3]
Length = 132
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHET 60
+ S+R +++S NIANA TPNY+A+D+ F +N MA++
Sbjct: 9 LGVHQYTLGVRSQRAEVLSSNIANADTPNYKARDV-DFAKAMNSAQSRQSGLAMAKSDGK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + + + P TG GNTV I E Y+++ +
Sbjct: 68 HFDMAALTQQNV---AYRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDGK 121
Query: 121 NSMVMHVVRG 130
S + +RG
Sbjct: 122 FSGMKKAIRG 131
>gi|188576753|ref|YP_001913682.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188576944|ref|YP_001913873.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521205|gb|ACD59150.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521396|gb|ACD59341.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 117
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHETHLKESDS 67
+R K+++ N++N TP Y+AKD+ +FE L LM T H
Sbjct: 1 MALREQRMKLIASNLSNVDTPGYKAKDL-NFEAALKSAQGEQDGGLMQTTDAKHYAV--- 56
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G N I DQ + GNTV E G Y + ++ ++
Sbjct: 57 GGGGLNPFQITRESDQP---SLDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTA 113
Query: 128 VRG 130
+ G
Sbjct: 114 ITG 116
>gi|116694216|ref|YP_728427.1| flagellar basal body rod protein FlgB [Ralstonia eutropha H16]
gi|113528715|emb|CAJ95062.1| flagellar basal body protein [Ralstonia eutropha H16]
Length = 135
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + ++RQ +++ NIA+A TP Y+A+D F + L Q+ +E + S
Sbjct: 9 LRFQQEALSLRNQRQSVIASNIAHADTPGYKARDF-DFSSTLAQSVERGHRNEG-MSLST 66
Query: 67 SSGLHWNAHV-----IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H A + V GNTV + E +E ++
Sbjct: 67 TSVRHLPAQAPGREEFDLAYRIPLQSSVDGNTVEMDAERVAFADNAVHFESGLTVMNSKI 126
Query: 122 SMVMHVVR 129
++ ++
Sbjct: 127 KTMLAAIQ 134
>gi|146277711|ref|YP_001167870.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
17025]
gi|145555952|gb|ABP70565.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
17025]
Length = 130
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ R +++ NIANA+TP+Y+A+DI F L + T +
Sbjct: 11 GLHAEALVLRETRNNLLTSNIANAATPHYKARDI-DFTAELARATGGGALRTTEARHMAV 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G A +A + + GNTV + E + Y+ + L+ + S +M
Sbjct: 70 GG---PAATGKALYREPVTPSLDGNTVEMAVEQMEFSENTLRYQTSLALLNRRISGLMTA 126
Query: 128 VRG 130
++G
Sbjct: 127 IKG 129
>gi|226944489|ref|YP_002799562.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
gi|226719416|gb|ACO78587.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
Length = 136
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N SER ++++ N+ANA TP +RA+D F L + R + + +
Sbjct: 9 LRFQQEALNLRSERHQVLAANVANADTPEFRARDF-DFSRELAKAVKDGR-GASSMSLAT 66
Query: 67 SSGLHWNA-----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H V E + GNTV + E + Y+ + +
Sbjct: 67 TSSRHLQGTSTTFAVRELLYRVPDQPSLDGNTVDMDRERAQFVDNTVRYQASLTFLDSRL 126
Query: 122 SMVMHVVR 129
+ ++
Sbjct: 127 QGLKTAMQ 134
>gi|208435439|ref|YP_002267105.1| flagellar basal-body rod protein [Helicobacter pylori G27]
gi|208433368|gb|ACI28239.1| flagellar basal-body rod protein [Helicobacter pylori G27]
Length = 140
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ S RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFDLVYKALDYRSLRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSTKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|170694389|ref|ZP_02885543.1| flagellar basal-body rod protein FlgB [Burkholderia graminis C4D1M]
gi|170140812|gb|EDT08986.1| flagellar basal-body rod protein FlgB [Burkholderia graminis C4D1M]
Length = 163
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 31/153 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F + + + RQ+++S NIANA TP Y+A+D+ F + L
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDV-DFASSLAGALKKTGAAGHTASNTA 67
Query: 51 ------------NFLMARTHETHLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
MA T + H+ + S T + GNTV +
Sbjct: 68 TLPLAQPAGVTSGMSMAATAQGHMSGKSTLSPAGGSPDDYRNLQYRVPTQPALDGNTVDL 127
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + +E ++ ++ ++
Sbjct: 128 DTERVQFADNTLHFESGMTVLSSQIKTMLSAIQ 160
>gi|330811238|ref|YP_004355700.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379346|gb|AEA70696.1| Putative flagellar basal-body rod protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 135
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q ++ ++R ++++ NIANA TPNY+A+D+ F +L + +T H +
Sbjct: 9 LGIHEQALSFRAQRAEVLANNIANADTPNYKARDL-DFSKVLAEQNE--KTKNGHFALNM 65
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGLGNGDESLMYRTPMQPSIDQNTVDAQLEQSNYAENSVNFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVSALRG 134
>gi|254460063|ref|ZP_05073479.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
HTCC2083]
gi|206676652|gb|EDZ41139.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
HTCC2083]
Length = 124
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---RTHETHLKES 65
+A A+ Q + ++N+ANA TP+++AK ++ F ++ + A T E HL +
Sbjct: 1 MAHGMASHAGRLQVVAAQNMANADTPDFKAKTLTPFRELIATDAHTASQRATRERHLNGN 60
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ +D+T +GN+V I +E+ +S + K ++ + + +++
Sbjct: 61 L--PEQNGIQTAQVSVDETAQSDPNGNSVAIEDEILRSVNAKRQHDRALAIYRSSLNILR 118
Query: 126 HVV 128
+
Sbjct: 119 TSI 121
>gi|148266226|ref|YP_001232932.1| flagellar basal-body rod protein FlgB [Geobacter uraniireducens
Rf4]
gi|146399726|gb|ABQ28359.1| flagellar basal-body rod protein FlgB [Geobacter uraniireducens
Rf4]
Length = 140
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR------THETH 61
+ S+ + + +S N+ANA TP Y ++ SFE L + T+ H
Sbjct: 12 NVLSKSLDLRARNHSHISANLANAETPGYTPTEL-SFEGELKEALKGKGKNKGSITNPRH 70
Query: 62 --LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
L+ ++ VIE P V GN V + NE+ + + +Y +L+ K
Sbjct: 71 IPLRGGSTTIDGVRGSVIETPASSPG---VDGNKVELENEMGRMVENQIMYNATVQLLGK 127
Query: 120 LNSMVMHVVRG 130
+ +RG
Sbjct: 128 KFDGIKTAIRG 138
>gi|167623358|ref|YP_001673652.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
gi|167353380|gb|ABZ75993.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
Length = 132
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
+ S+R +++S NIANA TPNY+A+D+ F + M ++
Sbjct: 9 LGVHQYTLGVRSQRAEVLSSNIANADTPNYKARDV-DFSKAMGAAQSQQSGLAMTKSDTK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + + H P TG GNTV I E Y+++ +
Sbjct: 68 HFDMAALTQQHVG---YRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLDSK 121
Query: 121 NSMVMHVVRG 130
+ + +RG
Sbjct: 122 FAGMKKALRG 131
>gi|229592133|ref|YP_002874252.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
SBW25]
gi|312962591|ref|ZP_07777081.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens WH6]
gi|229363999|emb|CAY51549.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
SBW25]
gi|311283171|gb|EFQ61762.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens WH6]
Length = 135
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q + ++R ++++ NIANA TPNY+A+D+ F +L +T +
Sbjct: 9 LGIHEQALGFRAQRAEVLANNIANADTPNYKARDL-DFSAVL--AAQQDKTKNGTFALNM 65
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAQGLSSGDESLLYRTPMQPSIDQNTVDAQLEQSAYAENSVNFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
+M +RG
Sbjct: 126 KGLMSALRG 134
>gi|113969603|ref|YP_733396.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-4]
gi|114046835|ref|YP_737385.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-7]
gi|113884287|gb|ABI38339.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-4]
gi|113888277|gb|ABI42328.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-7]
Length = 135
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 16/133 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---------QNFLMART 57
+ +ER +++S NIANA TP+Y+A+D+ F LN + M
Sbjct: 9 LGVHQFTLGIRAERAEVISSNIANADTPHYKARDV-DFSAALNVAKTQQQQRNSLEMTGD 67
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ H + +G + V P TG GNTV I E Y+++ +
Sbjct: 68 EQQHFGLAQLTGQYVKFRV---PNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFL 121
Query: 118 KKLNSMVMHVVRG 130
S + +RG
Sbjct: 122 DSKFSGMKKALRG 134
>gi|163781739|ref|ZP_02176739.1| flagellar basal body rod protein FlgB [Hydrogenivirga sp.
128-5-R1-1]
gi|159882959|gb|EDP76463.1| flagellar basal body rod protein FlgB [Hydrogenivirga sp.
128-5-R1-1]
Length = 124
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 4 ITFFQIASQ---HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ F+ + ++ +R K++ NIANA TPNYRAKD+ F+ +++ + T
Sbjct: 1 MDLFKGIRKVEPRVDFTWKRHKVILSNIANADTPNYRAKDLQ-FKDEVDR-IPLKTTSRK 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+K S G V+E + V N V + E+ K + YE+ K+I
Sbjct: 59 HIKPSGGEGF----KVVEVKRNL---VGNDRNNVSVEEEMAKLTQNRIAYEVYMKMISGN 111
Query: 121 NSMVMHVVRG 130
+ + +++RG
Sbjct: 112 INKLNNIIRG 121
>gi|323705449|ref|ZP_08117024.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535351|gb|EGB25127.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 136
Score = 85.0 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-----FLMARTHE 59
+ S+ + R +++S NIAN TP ++ D+ +FE+ILN T +
Sbjct: 7 NTVDLMSKALDASELRNEVISNNIANVDTPGFKRSDV-NFESILNDAINSNKLTGFVTDK 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + +S + +++ D +T +++ GN V I E+ + Y+ + +
Sbjct: 66 NHIPINSTSIDNIEPQIVQ---DNSTSMRLDGNNVDIDVEMSNLAKNQLYYDALAQRVSG 122
Query: 120 LNSMVMHVVR 129
+ ++ ++
Sbjct: 123 ELNSLLTAIK 132
>gi|120554030|ref|YP_958381.1| flagellar basal body rod protein FlgB [Marinobacter aquaeolei VT8]
gi|120323879|gb|ABM18194.1| flagellar basal-body rod protein FlgB [Marinobacter aquaeolei VT8]
Length = 132
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
I +R ++++ N+ANA TP Y+A+D+ F+ ++ + F M TH
Sbjct: 9 LGIHEHALQARVKRAEVLANNLANADTPGYKARDV-DFQAMMQKAQDSMTGFGMTTTHSG 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ S E + GNTV E + Y+ + + +
Sbjct: 68 HMDTSSPGADG------ELLYRTPHQPSIDGNTVDAQAEQTRFMRNAMDYQASFQFLSSR 121
Query: 121 NSMVMHVVRG 130
S + ++G
Sbjct: 122 FSGLTKALKG 131
>gi|88704309|ref|ZP_01102023.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis
KT71]
gi|88701360|gb|EAQ98465.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis
KT71]
Length = 146
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLK 63
++ Q +++ +++S NIAN+ TP Y+A+DI ++ ++ + M RTH HL
Sbjct: 24 LGVSPQVLALRAQKTELLSANIANSDTPGYKARDIDFRAAMQSAMGAQDGMTRTHAAHLN 83
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + G E T + GNTV E + Y+ + L+ +
Sbjct: 84 ASGTPGS------TEPMYRIPTQPSLDGNTVESQREHAEFMDNAMRYQASLNLLDGRINS 137
Query: 124 VMHVVRG 130
+ +RG
Sbjct: 138 LRTAIRG 144
>gi|315452788|ref|YP_004073058.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
49179]
gi|315131840|emb|CBY82468.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
49179]
Length = 140
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTH 58
M + + + ++ + RQ +++ NIAN TP YR KD+ FET+L + +
Sbjct: 1 MDLSKAYPLVYKAMDYRALRQDLIASNIANVDTPFYRPKDL-DFETMLAHKKAEVFDHQK 59
Query: 59 ETHLKESDSSGLHWNAHVIEA-----PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ HLK ++++ H E + GN+V I E + G +Y
Sbjct: 60 DKHLKLAETNPRHLEPKDFEDNKATIFFRDGHLAKNDGNSVDIDIETSEMGKNSTMYLAL 119
Query: 114 TKLIKKLNSMVMHVV 128
T +KK +V + +
Sbjct: 120 TTALKKHRGIVNYAI 134
>gi|89902474|ref|YP_524945.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
T118]
gi|89347211|gb|ABD71414.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
T118]
Length = 150
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 19/142 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------------ 48
++ +ERQ++++ NIANA TP Y A+D++ + +L
Sbjct: 9 LDFQAKALVLRAERQRVIASNIANADTPGYVARDLNFKDAMLQATGADSSSGLRTGNSNS 68
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
TH H+ S +G A Q+ + GN+V + E
Sbjct: 69 QGGGANGMTHPHHIALSGGAGASLGGSSHLAYTVQS-QPSLDGNSVDLDRERANFTDNAV 127
Query: 109 LYELNTKLIKKLNSMVMHVVRG 130
YE + I + ++ ++G
Sbjct: 128 RYEATLRFINGQSKTLLSAIQG 149
>gi|218506432|ref|ZP_03504310.1| flagellar basal body rod protein FlgB [Rhizobium etli Brasil 5]
Length = 86
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+ M RT+ H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK
Sbjct: 6 KSDITMTRTNPAHFSGNDFS-ETGDIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKR 64
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
Y+LNT L+ N M++ VR
Sbjct: 65 QYDLNTSLVSSFNRMMLMTVR 85
>gi|307638244|gb|ADN80694.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
gi|325996837|gb|ADZ52242.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
gi|325998429|gb|ADZ50637.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
Length = 140
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKEGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|188528351|ref|YP_001911038.1| flagellar basal body rod protein FlgB [Helicobacter pylori Shi470]
gi|188144591|gb|ACD49008.1| flagellar basal body rod protein FlgB [Helicobacter pylori Shi470]
Length = 140
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAK-----DGVSLFFRDGHLAKNDGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|308064341|gb|ADO06228.1| flagellar basal body rod protein FlgB [Helicobacter pylori Sat464]
Length = 140
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLGYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAK-----DGVSLFFRDGHLAKNDGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|254780091|ref|YP_003058198.1| flagellar basal body rod protein FlgB [Helicobacter pylori B38]
gi|254002004|emb|CAX30263.1| Flagellar basal-body rod protein DlgB [Helicobacter pylori B38]
Length = 140
Score = 84.6 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE N
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSN 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSTKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|121607564|ref|YP_995371.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
EF01-2]
gi|121552204|gb|ABM56353.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
EF01-2]
Length = 141
Score = 84.6 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 10/133 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---------ART 57
++RQ+ ++ NIANA TP Y A+D F L + M T
Sbjct: 9 LGFHGAALVLRAQRQRTIASNIANADTPGYAARDFK-FGDALREVAGMGSGLALRGAGST 67
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ G + T + +TV + E YE + +
Sbjct: 68 DPRHIPLPALPGSASADRQGASGYAVQTAPSLDNSTVDMDRERASFVDNAVRYETTLRFL 127
Query: 118 KKLNSMVMHVVRG 130
++ ++G
Sbjct: 128 NGRVKTMLGAIQG 140
>gi|52080220|ref|YP_079011.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
14580]
gi|52785597|ref|YP_091426.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
14580]
gi|319646001|ref|ZP_08000231.1| FlgB protein [Bacillus sp. BT1B_CT2]
gi|52003431|gb|AAU23373.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
14580]
gi|52348099|gb|AAU40733.1| FlgB [Bacillus licheniformis ATCC 14580]
gi|317391751|gb|EFV72548.1| FlgB protein [Bacillus sp. BT1B_CT2]
Length = 129
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
N + +QK+++ N+AN TPNY+AK + SF+ +LN+ +T + D G
Sbjct: 11 LEGALNQANIKQKVITNNLANVDTPNYKAKKV-SFKNVLNEESSRINAIKTDYRHIDFKG 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N V+ + T Q +GN V + E+ + + Y+ + I + + +
Sbjct: 70 NEPNYSVVS---RKNTTYQENGNNVDVDQEMSEMAKNQIQYQALVERISGKFNSLRTAIT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|296283243|ref|ZP_06861241.1| flagellar basal body rod protein FlgB [Citromicrobium bathyomarinum
JL354]
Length = 124
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETHLKESDSSGLH 71
LS+RQ+++++NIAN TP Y+A+++ SF +++ + T S+ L
Sbjct: 1 MRHLSDRQQVIAQNIANGDTPGYKAREVEAPSFAGMVDASGAGRVARPTVQISSEMRALG 60
Query: 72 WNAHVIEAPLDQTTGV--QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
A + V + GN V + ++ K G ++ + T L +K ++
Sbjct: 61 ARQQSSSAIILDENIVETKPDGNNVTLEEQVLKLGAVQSEFTALTNLYRKQMQLLKTAT 119
>gi|15646166|ref|NP_208350.1| flagellar basal body rod protein FlgB [Helicobacter pylori 26695]
gi|217031712|ref|ZP_03437216.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
gi|298737152|ref|YP_003729682.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
gi|2314742|gb|AAD08599.1| flagellar basal-body rod protein (flgB) [Helicobacter pylori 26695]
gi|216946559|gb|EEC25159.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
gi|298356346|emb|CBI67218.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
Length = 140
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ S RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRSLRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|71278001|ref|YP_268219.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
34H]
gi|71143741|gb|AAZ24214.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
34H]
Length = 132
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-----FLMARTHETH 61
FQ+ +Q S+R ++++ NIANA TP Y+AK + F L Q M+RT++ H
Sbjct: 9 FQLHTQGMLIRSQRAEVIASNIANADTPGYKAKGL-DFNQALAQAANKQKMGMSRTNDKH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
N+ P + TG GNTV + E Y+ + + +
Sbjct: 68 FDIRT---ELNNSVDYRVPNNPDTG---DGNTVDVQVERNLYLKNSMEYQASIQFLNGKI 121
Query: 122 SMVMHVVRG 130
+ V+ G
Sbjct: 122 KAMKKVISG 130
>gi|261838847|gb|ACX98613.1| flagellar basal-body rod protein [Helicobacter pylori 51]
Length = 140
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE N
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSN 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|317182785|dbj|BAJ60569.1| flagellar basal body rod protein FlgB [Helicobacter pylori F57]
Length = 140
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGATLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|301631994|ref|XP_002945076.1| PREDICTED: flagellar basal-body rod protein flgB-like [Xenopus
(Silurana) tropicalis]
Length = 141
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 39/133 (29%), Gaps = 10/133 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---------FLMART 57
+ERQ++++ NIANA TP Y A+D F L +
Sbjct: 9 LNFHGNALMLRAERQRVIASNIANADTPGYVARDFR-FADALRAATDDGTALVRQRLGTD 67
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H T + NTV + E YE + I
Sbjct: 68 GTRHAGHIRLPAARTGEQPGTLGYAVQTQPNLDRNTVDMDRERANFVDNAVHYEATLRFI 127
Query: 118 KKLNSMVMHVVRG 130
++ ++G
Sbjct: 128 NGNAKTMLSAIQG 140
>gi|89092133|ref|ZP_01165088.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
gi|89083868|gb|EAR63085.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
Length = 131
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 2/124 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + R ++++ NIANA TPN++A+D+ F L M +T
Sbjct: 9 LGIHDDALLHRARRAEVLANNIANADTPNFKARDME-FAHALEHASQMQV-KQTATSSGH 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ L + V GNTV + E+ + Y+ + + + K + +
Sbjct: 67 KTQLLEPDLAADMMYRIPNQASVDGNTVELQQEMARYTENALDYQTSFQFLNKKFTGLKS 126
Query: 127 VVRG 130
++G
Sbjct: 127 AIKG 130
>gi|311068139|ref|YP_003973062.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
gi|310868656|gb|ADP32131.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
Length = 129
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ +QK+++ NIAN TPNY+AK + SF+ +LNQ + +T + D S
Sbjct: 11 LENALGRANVKQKVITNNIANIDTPNYKAKKV-SFQNLLNQESSRLESVKTDYRHVDFSD 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N ++ + T Q +GN V I E+ + Y+ + + + + V+
Sbjct: 70 TGSNGSIV---ANSNTAYQQNGNNVDIDKEMTDLAENQINYQALVERMSGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|222112269|ref|YP_002554533.1| flagellar basal-body rod protein flgb [Acidovorax ebreus TPSY]
gi|221731713|gb|ACM34533.1| flagellar basal-body rod protein FlgB [Acidovorax ebreus TPSY]
Length = 138
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
SERQ+ ++ NIANA TP Y A+D F + +S
Sbjct: 9 LDFHGSALLLRSERQRAIASNIANADTPGYVARDFK-FADAMRAVNEAHNPSPLR-SQSV 66
Query: 67 SSGLHWNAHVIEAPLDQT-------TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S H + + T + NTV + E YE + I
Sbjct: 67 SDPRHIPLPAAASGSSDSTLGYALQTQPSLDNNTVDMDRERAAFVDNAVRYEATLRFING 126
Query: 120 LNSMVMHVVRG 130
+ ++ ++G
Sbjct: 127 QSKTMLSAIQG 137
>gi|83747657|ref|ZP_00944693.1| FlgB [Ralstonia solanacearum UW551]
gi|207728343|ref|YP_002256737.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
MolK2]
gi|207739740|ref|YP_002258133.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
IPO1609]
gi|83725709|gb|EAP72851.1| FlgB [Ralstonia solanacearum UW551]
gi|206591589|emb|CAQ57201.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
MolK2]
gi|206593122|emb|CAQ60028.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
IPO1609]
Length = 153
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 22/146 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMAR 56
F Q S+R ++++ NIANA TP+Y+A+D F++ L + + M
Sbjct: 7 QLFSFQEQALRLRSQRHQLLASNIANADTPSYKARDF-DFQSALQKATGQQSGSSLPMTA 65
Query: 57 THETH-------------LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
T H ++ S S+ +A E + + GNTV + E +
Sbjct: 66 TAAGHLTAAGAAAADVVPMQASLSAQSQADALQGEVEYRTSQQPSIDGNTVDMDGERMRF 125
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE + ++ ++ ++
Sbjct: 126 ADNTVRYEADLSIVTAKIKSMLAAIQ 151
>gi|296330832|ref|ZP_06873307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674350|ref|YP_003866022.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296151837|gb|EFG92711.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412594|gb|ADM37713.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 129
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+QK+++ NIAN TPNY+AK + SF+ +L+Q +T + D SG
Sbjct: 11 LENALGRADIKQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLEAIKTDYRHIDFSG 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N ++ + T Q +GN V + E+ + + Y+ + + + + V+
Sbjct: 70 TDSNYSIVTSG---DTSYQQNGNNVDVDKEMTELAQNQINYQALVERMNGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|88858146|ref|ZP_01132788.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
D2]
gi|88819763|gb|EAR29576.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
D2]
Length = 134
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 11/127 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETH 61
F I +R ++++ NIANA TP Y+AKDI F L Q+ ++RTHE H
Sbjct: 9 FGIHPNAMLARVQRAEVLASNIANADTPGYKAKDI-DFAQALKSAKSAQSSQLSRTHEKH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ SS + P TG GN+V + E Y+ + + +
Sbjct: 68 FSINTSS--IDSISQFRNPNQPDTG---DGNSVDVQVERNLYVQNSIEYQASLRFMTGKI 122
Query: 122 SMVMHVV 128
+ +
Sbjct: 123 QGLKKAL 129
>gi|146293693|ref|YP_001184117.1| flagellar basal body rod protein FlgB [Shewanella putrefaciens
CN-32]
gi|145565383|gb|ABP76318.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
CN-32]
gi|319427092|gb|ADV55166.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens 200]
Length = 134
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------R 56
+ +ER +++S NIANA TP+Y+A+D+ F +
Sbjct: 7 NALGVHQYTLGIRAERAEVISSNIANADTPHYKARDV-DFSAAMQAARSQQQQRNHLDIT 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
HE H ++ +G + P TG GNTV I E Y+++
Sbjct: 66 DHERHFGLAELTGQYVK---FRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGF 119
Query: 117 IKKLNSMVMHVVRG 130
+ S + +RG
Sbjct: 120 LDSKFSGMKKALRG 133
>gi|317013373|gb|ADU83981.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Lithuania75]
Length = 140
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSTKNGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|326796600|ref|YP_004314420.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
MMB-1]
gi|326547364|gb|ADZ92584.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
MMB-1]
Length = 131
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F + + S R +++ NIANA TP+Y+A+DI+ F+++L +A + H+
Sbjct: 9 FAGHDETLKFRSARASVLANNIANADTPHYKARDIT-FDSMLQSEVKCLDLAGNDDQHID 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + G +A + P + + GNTV + E + ++ + + + S
Sbjct: 68 GSSTFGSD-DALLYRNP----SQPSLDGNTVDMQREQAEFAQNTLQFDTSFLFLDRKVSG 122
Query: 124 VMHVVRG 130
+ + G
Sbjct: 123 MRKALTG 129
>gi|308183714|ref|YP_003927841.1| flagellar basal body rod protein FlgB [Helicobacter pylori PeCan4]
gi|308065899|gb|ADO07791.1| flagellar basal body rod protein FlgB [Helicobacter pylori PeCan4]
Length = 140
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQTS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|261840252|gb|ACY00018.1| flagellar basal body rod protein FlgB [Helicobacter pylori 52]
Length = 140
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSTKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|317014994|gb|ADU82430.1| flagellar basal body rod protein FlgB [Helicobacter pylori
Gambia94/24]
Length = 140
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE N
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSN 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKNGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|317010251|gb|ADU80831.1| flagellar basal body rod protein FlgB [Helicobacter pylori India7]
Length = 140
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR +D+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPRDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|238028852|ref|YP_002913083.1| flagellar basal body rod protein FlgB [Burkholderia glumae BGR1]
gi|237878046|gb|ACR30379.1| Flagellar basal-body rod protein FlgB [Burkholderia glumae BGR1]
Length = 167
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 14 FAFGRQALDVRAYRQELISSNIANADTPGYQARDV-DFASALGRSLKHQAGQAAADNATQ 72
Query: 51 -----------NFLMARTHETHLKESD--SSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
+A T H+ + S+ + A + GNTV +
Sbjct: 73 LPLARPAGVTSGMTLAATEPGHMSGNTRLSATGGPSDDFGRAAYRIPNQPSLDGNTVDLD 132
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + YE ++ ++ +
Sbjct: 133 AERVQFADNTVHYEAGMTVVTGQIKAMLAAIT 164
>gi|217033828|ref|ZP_03439253.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
gi|216943726|gb|EEC23169.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
gi|297380733|gb|ADI35620.1| flagellar basal-body rod protein FlgB [Helicobacter pylori v225d]
gi|308062842|gb|ADO04730.1| flagellar basal body rod protein FlgB [Helicobacter pylori Cuz20]
Length = 140
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|210135738|ref|YP_002302177.1| flagellar basal body rod protein FlgB [Helicobacter pylori P12]
gi|210133706|gb|ACJ08697.1| flagellar basal-body rod protein FlgB [Helicobacter pylori P12]
gi|317179761|dbj|BAJ57549.1| flagellar basal body rod protein FlgB [Helicobacter pylori F30]
Length = 140
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|126175149|ref|YP_001051298.1| flagellar basal body rod protein FlgB [Shewanella baltica OS155]
gi|125998354|gb|ABN62429.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS155]
Length = 134
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 1/127 (0%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ ++R +++S NIANA TP+Y+A+D+ + + + ++E
Sbjct: 7 NALGVHQYTLGIRAQRAEVISSNIANADTPHYKARDVDFSAAMQAARGQQQQRNSLEMQE 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+D GNTV I E Y+++ + S
Sbjct: 67 TDKHFGLAELTGQFVKFRVPNQPDTGDGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSG 126
Query: 124 VMHVVRG 130
+ +RG
Sbjct: 127 MKKALRG 133
>gi|304316911|ref|YP_003852056.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778413|gb|ADL68972.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 136
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-----FLMARTHE 59
+ S+ + R +++S NIAN TP ++ D+ +FE+ILN T +
Sbjct: 7 NTVDLMSKALDASELRDEVISNNIANVDTPGFKRSDV-NFESILNDAINSNKLAGFVTDK 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + +S + +++ D +T +++ GN V I E+ + Y + +
Sbjct: 66 NHIPINSTSIDNIEPQIVQ---DNSTSMRLDGNNVDIDVEMSNLAKNQLYYSALAQRVSG 122
Query: 120 LNSMVMHVVR 129
+ ++ ++
Sbjct: 123 ELNSILTAIK 132
>gi|153001475|ref|YP_001367156.1| flagellar basal body rod protein FlgB [Shewanella baltica OS185]
gi|160876206|ref|YP_001555522.1| flagellar basal body rod protein FlgB [Shewanella baltica OS195]
gi|217972595|ref|YP_002357346.1| flagellar basal body rod protein FlgB [Shewanella baltica OS223]
gi|304409981|ref|ZP_07391600.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
gi|307302306|ref|ZP_07582064.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
gi|151366093|gb|ABS09093.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS185]
gi|160861728|gb|ABX50262.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS195]
gi|217497730|gb|ACK45923.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS223]
gi|304351390|gb|EFM15789.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
gi|306914344|gb|EFN44765.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
gi|315268396|gb|ADT95249.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS678]
Length = 134
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 1/127 (0%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ ++R +++S NIANA TP+Y+A+D+ + + + ++E
Sbjct: 7 NALGVHQYTLGIRAQRAEVISSNIANADTPHYKARDVDFSAAMQAARGQQQQRNSLEMQE 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SD GNTV I E Y+++ + S
Sbjct: 67 SDKHFGLAELTGQFVKFRVPNQPDTGDGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSG 126
Query: 124 VMHVVRG 130
+ +RG
Sbjct: 127 MKKALRG 133
>gi|94263246|ref|ZP_01287063.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
gi|94264090|ref|ZP_01287889.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
gi|93455506|gb|EAT05696.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
gi|93456464|gb|EAT06584.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
MLMS-1]
Length = 128
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----LMARTHETHLK 63
++ Q N +ERQ ++ NIAN TP Y+ +D FE + + +ART+ H+
Sbjct: 12 EVMHQALNLRNERQGLIQSNIANLETPGYKVQDF-PFEKAMERAMSGRGQLARTNPGHIG 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + V + E+ K + +Y+ ++LI K
Sbjct: 71 VGPSEAARPGQYRQAERP------------VDLEEEMLKLSENQLMYQATSQLITKKFEG 118
Query: 124 VMHVV 128
+ V+
Sbjct: 119 LRQVI 123
>gi|221636051|ref|YP_002523927.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
5159]
gi|221157824|gb|ACM06942.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
5159]
Length = 138
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 11/134 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMAR 56
I + ++ + L+ RQ++ + N+ANA TP +R + + FE +L + R
Sbjct: 5 IDPIGVLARTLDALALRQQVTASNVANAETPGFRGQAVR-FEDLLQAMLNGTFARLPLVR 63
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T H+ + SS V+E T + GN V I E+ Y +++
Sbjct: 64 TDSRHIAVTASSPSALQPEVVELT---GTRYRPDGNNVDIEREMGLLAETTLRYSAVSEV 120
Query: 117 IKKLNSMVMHVVRG 130
+ + +M+ + G
Sbjct: 121 LARRLAMLRAMASG 134
>gi|108563933|ref|YP_628249.1| flagellar basal body rod protein FlgB [Helicobacter pylori HPAG1]
gi|107837706|gb|ABF85575.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
Length = 140
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFEKSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|325982375|ref|YP_004294777.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
gi|325531894|gb|ADZ26615.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
Length = 136
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ RQ+++S N+ANA TPN++AKDI F ++L++ + + +
Sbjct: 9 LNYHHTALSLRVARQELLSSNVANADTPNFKAKDI-DFASMLHEKLS-STPSLKKVSLNT 66
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S +H N+ V D GNTV + E + Y+ + +
Sbjct: 67 TSLMHINSSVPGLFGDNILYRVPLQPSADGNTVDMDMERTRFADNAIKYDASITFLSNEL 126
Query: 122 SMVMHVVR 129
+ ++
Sbjct: 127 KNISLALQ 134
>gi|85716542|ref|ZP_01047512.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
gi|85696543|gb|EAQ34431.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
Length = 120
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
W ERQ++++ENIAN+ TPN+R D+ E + A T T +SG
Sbjct: 1 MQWHQERQRVLAENIANSDTPNFRPHDLV--EPRFDAQGGNASTGATLAMIRTTSGQSIA 58
Query: 74 AHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ Q + +GN V + +++ + + Y + L + ++ V
Sbjct: 59 GFEASSHFGQNGNGGFQTRPAGNAVNLEDQMLQVSANQMDYAAASSLYSRSLRLLKMAV 117
>gi|117919769|ref|YP_868961.1| flagellar basal body rod protein FlgB [Shewanella sp. ANA-3]
gi|117612101|gb|ABK47555.1| flagellar basal-body rod protein FlgB [Shewanella sp. ANA-3]
Length = 134
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--------QNFLMARTH 58
+ +ER +++S NIANA TP+Y+A+D+ F LN +N L
Sbjct: 9 LGVHQFTLGIRAERAEVISSNIANADTPHYKARDV-DFSAALNIAKTQQQQRNSLEMTGD 67
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H + +G + P TG GNTV I E Y+++ +
Sbjct: 68 EQHFGLAQLTGQYVK---FRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGFLD 121
Query: 119 KLNSMVMHVVRG 130
S + +RG
Sbjct: 122 SKFSGMKKALRG 133
>gi|313683370|ref|YP_004061108.1| flagellar basal-body rod protein flgb [Sulfuricurvum kujiense DSM
16994]
gi|313156230|gb|ADR34908.1| flagellar basal-body rod protein FlgB [Sulfuricurvum kujiense DSM
16994]
Length = 142
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ + RQ ++S NIANA TP YR +DIS +T+ ++ + LK + +
Sbjct: 10 DLMQNAMDYRAARQDMISGNIANADTPFYRPRDISFEDTLAQKSAQIFGDKSQTLKMAHT 69
Query: 68 SGLHWNA-----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+G H + + GN+V + E + ++ T +KK ++
Sbjct: 70 NGAHLDGIDAASSAPTMFFRDGHMARNDGNSVDLDVESTEMAKNSTMFNALTAALKKDSA 129
Query: 123 MVMHVV 128
+ V+
Sbjct: 130 LFKSVI 135
>gi|315585966|gb|ADU40347.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 35A]
gi|317178282|dbj|BAJ56071.1| flagellar basal body rod protein FlgB [Helicobacter pylori F16]
Length = 140
Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KILPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|120613056|ref|YP_972734.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli AAC00-1]
gi|120591520|gb|ABM34960.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli AAC00-1]
Length = 147
Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 14/138 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL---- 62
+ERQ+ ++ NIANA TP Y A+D + + + + A +
Sbjct: 9 LDFHGNALMLRAERQRAIASNIANADTPGYVARDFNFADALRDATGQGAGASFNAVERAL 68
Query: 63 --KESDSSGLHWNAHVIEAPLDQT--------TGVQVSGNTVGITNELYKSGHIKYLYEL 112
++S + H T + NTV + E YE
Sbjct: 69 QRQQSATDPRHIPLPGATTGSGAPGSLGYTVQTQPSLDNNTVDLDRERAAFADNAVRYEA 128
Query: 113 NTKLIKKLNSMVMHVVRG 130
+ I + ++ ++G
Sbjct: 129 TLRFINGNSRTMLSAIQG 146
>gi|317181262|dbj|BAJ59048.1| flagellar basal body rod protein FlgB [Helicobacter pylori F32]
Length = 140
Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KILPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|34557981|ref|NP_907796.1| flagellar basal body rod protein FlgB [Wolinella succinogenes DSM
1740]
gi|34483699|emb|CAE10696.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGB PROXIMAL ROD PROTEIN
[Wolinella succinogenes]
Length = 145
Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILNQNFLMAR 56
++A + ++ S RQ ++S NIAN TP YR +DI+ F N+ + +
Sbjct: 13 ELAYKALDYRSLRQDLISSNIANVDTPMYRPRDINFEEVLTSESQKLFSNEQNKTLGLGQ 72
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+ HL+ D+S + GN+V + E + G +Y+
Sbjct: 73 TNAMHLEPMDTSDSKGTIF-----FRDGHMARNDGNSVDLDVESSEIGKNSVMYQALVGS 127
Query: 117 IKKLNSMVMHVV 128
+KK ++ + +
Sbjct: 128 LKKHGTIFTYAI 139
>gi|326319094|ref|YP_004236766.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375930|gb|ADX48199.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 147
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 43/141 (30%), Gaps = 20/141 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA----------- 55
+ERQ+ ++ NIANA TP Y A+D +F L
Sbjct: 9 LDFHGNALMLRAERQRAIASNIANADTPGYVARDF-NFADALRDATGQGEGASFSAVERA 67
Query: 56 ------RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
T H+ ++ + T + NTV + E
Sbjct: 68 LQRQQSATDPRHIPLPGATTGSGAPGTL--GYTVQTQPSLDNNTVDLDRERAAFADNAVR 125
Query: 110 YELNTKLIKKLNSMVMHVVRG 130
YE + I ++ ++G
Sbjct: 126 YEATLRFINGNARTMLSAIQG 146
>gi|330445345|ref|ZP_08308997.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489536|dbj|GAA03494.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 131
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++R + ++ NIANA+TP Y+AKDI F+ LN A T ++ S
Sbjct: 9 LGVHQHTVGVRAKRAETLASNIANANTPGYKAKDI-DFQRALN-----AATSGANIGLSR 62
Query: 67 SSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++G H NA P TG GNTV E Y+ + +
Sbjct: 63 TNGRHINATTQVTGEQKFRVPTQPDTG---DGNTVDAQLEQNMFMQNSIEYQASLDFLGS 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLSKALKG 130
>gi|169831914|ref|YP_001717896.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
audaxviator MP104C]
gi|169638758|gb|ACA60264.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
audaxviator MP104C]
Length = 132
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHE 59
+ ++ + + RQ++++ NIAN +TP ++ + F+ + + M RT
Sbjct: 6 PVMSLLARALDGQAVRQRVIAHNIANLNTPGFKRSRV-DFQAFMQAALDDSAVRMKRTDP 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL ++ T + GN V + E+ + Y +
Sbjct: 65 RHLAGRAGDDNGPQVEIVRG-----TSQRADGNNVDLEREMVELVDNVLGYRAIGQFWSS 119
Query: 120 LNSMVMHVVRG 130
+ V+RG
Sbjct: 120 KYGIYSQVIRG 130
>gi|295696110|ref|YP_003589348.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
gi|295411712|gb|ADG06204.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
Length = 135
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISS---FETILNQNFLMA--RTHETHL 62
Q Q + + RQK++++N+AN TP Y +D+ F L Q +A RT H
Sbjct: 10 QWLPQALDATALRQKLIADNVANVDTPGYHRQDVRFEDIFAQALAQPAPLAGFRTDPRHF 69
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ E +D T +GN V + E+ + + Y + + +
Sbjct: 70 IIGPPP---LSQVRPETTVDDQTVYSTNGNNVDMDREMTELAANQTEYLTLLQDVNLQFA 126
Query: 123 MVMHVVRG 130
M+ + + G
Sbjct: 127 MLRYALNG 134
>gi|332674371|gb|AEE71188.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 83]
Length = 140
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S+ + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + + +KK ++ + +
Sbjct: 116 YLVLSSALKKYRGVINYAI 134
>gi|78485815|ref|YP_391740.1| flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
XCL-2]
gi|78364101|gb|ABB42066.1| Flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
XCL-2]
Length = 133
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 6/131 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ F I ERQ I++ NIANA TPN++A+D+ + + +++ H
Sbjct: 3 SVFGIHEHALAVRKERQSILANNIANADTPNFKARDVDWRKEMQAAEEDLSKGHYK-PDL 61
Query: 65 SDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++ H + D T + GNTV E + Y+ + +
Sbjct: 62 KMTNSRHIEGFAEASTEDYLKYRMPTQPALDGNTVETHIEKAQFMENSMQYQATLEFLNG 121
Query: 120 LNSMVMHVVRG 130
+ + +RG
Sbjct: 122 KITGIRGALRG 132
>gi|307731366|ref|YP_003908590.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
gi|307585901|gb|ADN59299.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
Length = 163
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 31/153 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F + + + RQ+++S NIANA TP Y+A+D+ F + L
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDV-DFASSLAGALKKTGAAGHTASNTA 67
Query: 51 ------------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
MA T HL + T + GNTV I
Sbjct: 68 TLAMAQPAGVTSGMSMAATAPGHLSGKSTLRPAGGTTDDYGNLQYRNPTQPALDGNTVDI 127
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + +E ++ ++ ++
Sbjct: 128 DTERVQFADNTLHFESGMTVLSSQIKTMLSAIQ 160
>gi|257091582|ref|YP_003165225.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048591|gb|ACV37778.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 119
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
+ RQ++++ NIANA TP Y+A DI +N+ + + L + ++ H
Sbjct: 1 MLGVRAYRQQLLASNIANADTPGYKAVDID-----INEAARVVTSTAASLSLATTANGHL 55
Query: 73 NAHVIEAP----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ P GNTV + E K +Y+ + + +M ++
Sbjct: 56 SGGTQAPPFPLKFHVPYQAAADGNTVEMDVERQKFSENSLMYQFSLDRVSGHFKHLMELL 115
Query: 129 R 129
+
Sbjct: 116 Q 116
>gi|207091984|ref|ZP_03239771.1| flagellar basal body rod protein FlgB [Helicobacter pylori
HPKX_438_AG0C1]
Length = 140
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPRHLDFENSVKDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK ++ + +
Sbjct: 116 YLALSSALKKYRGVINYAI 134
>gi|167568104|ref|ZP_02361020.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
EO147]
gi|167574222|ref|ZP_02367096.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
C6786]
Length = 163
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE------- 59
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRTYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGARSAGNAAQL 67
Query: 60 ---------THLKESDSSGLHWNAHVI------------EAPLDQTTGVQVSGNTVGITN 98
+ + + +SG H +V A + GNTV +
Sbjct: 68 PLAQPAGVTSGMSMATTSGSHMAGNVKLIPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + Y+ ++ + ++ +
Sbjct: 128 ERVQFADNAVHYQAGMTVMTQQIKTMIAAIT 158
>gi|75675325|ref|YP_317746.1| flagellar basal body rod protein FlgB [Nitrobacter winogradskyi
Nb-255]
gi|74420195|gb|ABA04394.1| Flagellar basal body rod protein [Nitrobacter winogradskyi Nb-255]
Length = 135
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 6/132 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ I+ W ERQ++++ENIAN+ TPN+R D+ E + A + T
Sbjct: 3 LNDISALAALRTRMQWHQERQRVLAENIANSDTPNFRPHDLV--EPTFDAQGGNASSGVT 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQT----TGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
++G A Q + +GN V + +++ + + Y L
Sbjct: 61 LAMTRTTAGQSMAGSGASAHFGQNGNGGFQTRPAGNAVSLEDQMLQVSANQMDYAAAASL 120
Query: 117 IKKLNSMVMHVV 128
+ ++
Sbjct: 121 YSRSLRLLKMAA 132
>gi|126668555|ref|ZP_01739509.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
gi|126626960|gb|EAZ97603.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
Length = 136
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
I +R +I++ N+ANA TP ++A+DI F+ I+ + F M T+
Sbjct: 9 LGIHQYALQARVQRAEILANNLANADTPGFKARDI-DFQAIMKRAQSNASGFGMNTTNSG 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ ++ G + + V GNTV E + Y+ + + +
Sbjct: 68 HI--TEGGGAPGSLGDNDLLYRTPHQPSVDGNTVDAQQEQSRFMRNAMDYQASFQFLSSK 125
Query: 121 NSMVMHVVRG 130
S + + G
Sbjct: 126 FSGISKALTG 135
>gi|321315384|ref|YP_004207671.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
gi|320021658|gb|ADV96644.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
Length = 129
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ +QK+++ NIAN TPNY+AK + SF+ +L+Q T +T + D S
Sbjct: 11 LENALSRADIKQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLETIKTDYRHVDFSD 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N ++ + T Q +GN V + E+ + + Y+ + + + + V+
Sbjct: 70 TDSNYSIVASG---DTSYQQNGNNVDVDKEMTELAQNQINYQALVERMNGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|83719578|ref|YP_440798.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
E264]
gi|167617582|ref|ZP_02386213.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
Bt4]
gi|257140551|ref|ZP_05588813.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
E264]
gi|83653403|gb|ABC37466.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
E264]
Length = 163
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGAASAGNAAAL 67
Query: 51 ----------NFLMARTHETHLKESD--SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITN 98
MA T HL + + + A + GNTV +
Sbjct: 68 PLAQPAGVTSGMSMATTSGAHLAGNVKLTPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + ++ ++ + ++ +
Sbjct: 128 ERVQFADNAVHFQAGMTVLTQQIKTMIAAIT 158
>gi|149911705|ref|ZP_01900313.1| flagellar basal body protein [Moritella sp. PE36]
gi|149805235|gb|EDM65252.1| flagellar basal body protein [Moritella sp. PE36]
Length = 131
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHET 60
I R ++++ NIANA TP ++A+D+S + + + +F +++T E
Sbjct: 7 NALGIHQYSVGVRERRAEVLASNIANADTPGFKARDLSFKDALASATQGSSFNLSKTSER 66
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ S P TG GNTV + E Y+ + +
Sbjct: 67 HISGGRSMASDLQ---YRIPNQPDTG---DGNTVDVQTERTNFMQNSMEYQASLSFLSSK 120
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 121 MQTMRKAIKG 130
>gi|154686034|ref|YP_001421195.1| flagellar basal body rod protein FlgB [Bacillus amyloliquefaciens
FZB42]
gi|154351885|gb|ABS73964.1| FlgB [Bacillus amyloliquefaciens FZB42]
Length = 129
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+QK+++ NIAN TPNY+AK + SF +L+Q +T + D +G
Sbjct: 11 LENALGRADIKQKVLTNNIANIDTPNYKAKKV-SFRNLLDQETSNLEAVKTDYRHVDFTG 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ ++ + T Q +GN V I E+ + Y+ + + + + V+
Sbjct: 70 SGDDYSIVSS---SDTSYQQNGNNVDIDKEMTDLAENQINYQALVERMSGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|332187895|ref|ZP_08389628.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
gi|332012056|gb|EGI54128.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
Length = 115
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 16/130 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M T F I +R +++ NIANASTP ++A+DI F+ L
Sbjct: 1 MAAETLFGIHGAALEVRGQRMGVLASNIANASTPGFKARDI-DFKAAL------------ 47
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ G + GNTV + E Y+ +
Sbjct: 48 ---AAVEGGQQDQGIAKAMKYRVPLETSLDGNTVELAEEQTAFAENAVQYQTTLSFLNGR 104
Query: 121 NSMVMHVVRG 130
S + ++G
Sbjct: 105 ISTITRALKG 114
>gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus denitrificans
BC]
gi|330826752|ref|YP_004390055.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
K601]
gi|317119097|gb|ADV01586.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
BC]
gi|329312124|gb|AEB86539.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
K601]
Length = 138
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
SERQ+ ++ NIANA TP Y A+D F L + AR ++S
Sbjct: 9 LDFHGNALLLRSERQRAIASNIANADTPGYVARDFQ-FADAL-RAAEGARAPGGMRQQSV 66
Query: 67 SSGLHWNAHVIEAPLDQ-------TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S H T + N+V + E YE + I
Sbjct: 67 SDPRHIPLPAASTGQSGGALGYALQTQPSLDNNSVDMDRERAAFVDNAVRYEATLRFING 126
Query: 120 LNSMVMHVVRG 130
++ ++G
Sbjct: 127 NAKTMLSAIQG 137
>gi|237810458|ref|YP_002894909.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
MSHR346]
gi|237506387|gb|ACQ98705.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
MSHR346]
Length = 163
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-------- 58
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGATSAGNAAQL 67
Query: 59 --------ETHLKESDSSGLHWNAHVI------------EAPLDQTTGVQVSGNTVGITN 98
+ + + +SG H +V A + GNTV +
Sbjct: 68 PLAQPAGVASGMSMATTSGAHLAGNVKLIPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + Y+ ++ + ++ +
Sbjct: 128 ERVQFADNAVHYQAGMTVMTQQIKTMIAAIT 158
>gi|24374761|ref|NP_718804.1| flagellar basal body rod protein FlgB [Shewanella oneidensis MR-1]
gi|24349427|gb|AAN56248.1|AE015762_5 flagellar basal-body rod protein FlgB [Shewanella oneidensis MR-1]
Length = 134
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--------QNFLMARTH 58
+ SER ++++ NIANA TP+Y+A+D+ F LN +N L
Sbjct: 9 LGVHQFTLGIRSERAEVLASNIANADTPHYKARDV-DFSAALNVAKTQQQQRNSLEMTGD 67
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H + +G + P TG GNTV + E Y+++ +
Sbjct: 68 EQHFGLAQLTGQYVK---FRVPNQPDTG---DGNTVDVQQEQSAFMQNALEYQMSLGFLD 121
Query: 119 KLNSMVMHVVRG 130
S + +RG
Sbjct: 122 SKFSGMKKALRG 133
>gi|152990370|ref|YP_001356092.1| flagellar basal-body rod protein FlgB [Nitratiruptor sp. SB155-2]
gi|151422231|dbj|BAF69735.1| flagellar basal-body rod protein FlgB [Nitratiruptor sp. SB155-2]
Length = 121
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ A++ ER K++ NIANA TPN++ K++ FE L + +T H+
Sbjct: 8 LEKAASFFFERSKVIQGNIANADTPNFKPKELV-FEQELKNRMELKKTDPKHI-----DP 61
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E L Q G N V I EL K +Y+ ++ +KK + + +
Sbjct: 62 QMQKGEFKEVELGQIRGY--DNNRVDIQEELAKLAESSIMYKSLSETLKKEFTKLKLAIT 119
Query: 130 G 130
G
Sbjct: 120 G 120
>gi|91785637|ref|YP_560843.1| flagellar basal body rod protein FlgB [Burkholderia xenovorans
LB400]
gi|91689591|gb|ABE32791.1| Flagellar basal-body rod protein FlgB [Burkholderia xenovorans
LB400]
Length = 164
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 32/154 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----------------- 49
F Q + + RQ+++S NIANA TP Y+A+D+ F + L
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYKARDV-DFASSLAGALKKAGGSAGTAASNS 67
Query: 50 ------------QNFLMARTHETHLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVG 95
M T H+ + + T + GNTV
Sbjct: 68 STLAMTQPAGVTGGMSMVSTAPGHMAGKSTLTPTGGAPDDYGNLQYRVPTQPALDGNTVD 127
Query: 96 ITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
I E + +E ++ ++ ++
Sbjct: 128 IDTERVQFADNTLHFESGMTVLSSQIKTMLSAIQ 161
>gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2]
Length = 143
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------L 53
++R +++S N+ANA+TP Y+AKDI F +
Sbjct: 8 LVGFHQSALAIRTDRMEVISGNLANANTPGYKAKDI-DFNKAMESAMSAQDGQHKLGGGS 66
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ RTH+ H+ SS P TG GNTV + E + Y+
Sbjct: 67 LVRTHDKHIGGDVSSVASNFEMQYRIPTQPDTG---DGNTVEVQAERNRFLDNGLRYQAT 123
Query: 114 TKLIKKLNSMVMHVV 128
+ I + +
Sbjct: 124 LEFINGKVKGMKKAL 138
>gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
BON]
gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
BON]
Length = 137
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHL 62
+ S+ + L R +++S+N+AN TP ++A ++ FE +L + T+ H+
Sbjct: 12 GVLSKALDGLWMRNQVISDNVANVDTPGFKASKVA-FEDVLKGALDDNALKGKVTNIKHI 70
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S V+++ Q T +++ GN V I E+ Y + + K
Sbjct: 71 PIGALSAKDVQPQVLQS---QNTSMRMDGNNVDIDLEMADLAKTTIAYNAVIQKMTKEFQ 127
Query: 123 MVMHVVRG 130
M+ + G
Sbjct: 128 MLRSAING 135
>gi|218672512|ref|ZP_03522181.1| flagellar basal body rod protein FlgB [Rhizobium etli GR56]
Length = 80
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ MART+ H +D S + V +A LDQ G+Q SGNTVG+ EL KSG IK Y
Sbjct: 2 DIAMARTNPAHFSGNDLSD-SADIDVKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQY 60
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+LNT L+ N M++ VR
Sbjct: 61 DLNTSLVSSFNRMMLMTVR 79
>gi|53724562|ref|YP_104795.1| flagellar basal body rod protein FlgB [Burkholderia mallei ATCC
23344]
gi|67641535|ref|ZP_00440312.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
horse 4]
gi|121600142|ref|YP_994288.1| flagellar basal body rod protein FlgB [Burkholderia mallei SAVP1]
gi|124384637|ref|YP_001028063.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
10229]
gi|126450078|ref|YP_001082870.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
10247]
gi|126451866|ref|YP_001064561.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
1106a]
gi|167001533|ref|ZP_02267328.1| flagellar basal-body rod protein FlgB [Burkholderia mallei PRL-20]
gi|167813798|ref|ZP_02445478.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
91]
gi|167822315|ref|ZP_02453786.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 9]
gi|167892407|ref|ZP_02479809.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
7894]
gi|167900905|ref|ZP_02488110.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
NCTC 13177]
gi|167917161|ref|ZP_02504252.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
BCC215]
gi|217424904|ref|ZP_03456400.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
576]
gi|226199738|ref|ZP_03795289.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pakistan 9]
gi|242317296|ref|ZP_04816312.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1106b]
gi|254174732|ref|ZP_04881393.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
10399]
gi|254182143|ref|ZP_04888740.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
gi|254188073|ref|ZP_04894585.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pasteur 52237]
gi|254196553|ref|ZP_04902977.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
S13]
gi|254201893|ref|ZP_04908257.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
gi|254207227|ref|ZP_04913578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
gi|254359729|ref|ZP_04976000.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
2002721280]
gi|52427985|gb|AAU48578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
23344]
gi|121228952|gb|ABM51470.1| flagellar basal-body rod protein FlgB [Burkholderia mallei SAVP1]
gi|124292657|gb|ABN01926.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
10229]
gi|126225508|gb|ABN89048.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1106a]
gi|126242948|gb|ABO06041.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
10247]
gi|147747787|gb|EDK54863.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
gi|147752769|gb|EDK59835.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
gi|148028943|gb|EDK86875.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
2002721280]
gi|157935753|gb|EDO91423.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pasteur 52237]
gi|160695777|gb|EDP85747.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
10399]
gi|169653296|gb|EDS85989.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
S13]
gi|184212681|gb|EDU09724.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
gi|217391924|gb|EEC31950.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
576]
gi|225928089|gb|EEH24125.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
Pakistan 9]
gi|238522486|gb|EEP85930.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
horse 4]
gi|242140535|gb|EES26937.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1106b]
gi|243062735|gb|EES44921.1| flagellar basal-body rod protein FlgB [Burkholderia mallei PRL-20]
Length = 163
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-------- 58
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGAASAGNAAQL 67
Query: 59 --------ETHLKESDSSGLHWNAHVI------------EAPLDQTTGVQVSGNTVGITN 98
+ + + +SG+H +V A + GNTV +
Sbjct: 68 PLAQPAGVASGMSMATTSGVHLAGNVKLIPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + Y+ ++ + ++ +
Sbjct: 128 ERVQFADNAVHYQAGMTVMTQQIKTMIAAIT 158
>gi|239995128|ref|ZP_04715652.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii ATCC
27126]
Length = 144
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------- 52
+ER +++S N+ANA+TP Y+A+DI F +
Sbjct: 8 LVGFHESALTIRTERMEVISGNLANANTPGYKARDI-DFNKAMQSAMREASGGTANHASS 66
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
M RT++ HL + +S P TG GNTV + E + Y+
Sbjct: 67 GMVRTNDRHLSGNSTSVAANFDMQYRIPTQPDTG---DGNTVEVQAERNRFLDNGLRYQA 123
Query: 113 NTKLIKKLNSMVMHVV 128
+ + + + +
Sbjct: 124 SLEFLNGKIKGMKKAL 139
>gi|53717911|ref|YP_106897.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
K96243]
gi|76809258|ref|YP_331876.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
1710b]
gi|134283584|ref|ZP_01770283.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
gi|167717657|ref|ZP_02400893.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
DM98]
gi|167736700|ref|ZP_02409474.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
14]
gi|167843905|ref|ZP_02469413.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
B7210]
gi|167909124|ref|ZP_02496215.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
112]
gi|254262000|ref|ZP_04953054.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1710a]
gi|254295811|ref|ZP_04963268.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
406e]
gi|52208325|emb|CAH34258.1| putative flagellar basal-body rod protein [Burkholderia
pseudomallei K96243]
gi|76578711|gb|ABA48186.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1710b]
gi|134244993|gb|EBA45088.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
gi|157805665|gb|EDO82835.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
406e]
gi|254220689|gb|EET10073.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1710a]
Length = 163
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-------- 58
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGAASAGNAAQL 67
Query: 59 --------ETHLKESDSSGLHWNAHVI------------EAPLDQTTGVQVSGNTVGITN 98
+ + + +SG H +V A + GNTV +
Sbjct: 68 PLAQPAGVASGMSMATTSGAHLAGNVKLIPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + Y+ ++ + ++ +
Sbjct: 128 ERVQFADNAVHYQAGMTVMTQQIKTMIAAIT 158
>gi|162661125|gb|EDQ48677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 515
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + F IA ++R I++ NIANA TP Y+AKD+ E + N M T
Sbjct: 387 MSEVRFEDIA---LKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSST 443
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
SS + + + + + NTV + E EL
Sbjct: 444 SKGHIPSSEMKS-IYDTQVAFRPASQNSLDRNTVDLDQERASFIDNAIRTELA 495
>gi|326404526|ref|YP_004284608.1| flagellar basal-body rod protein FlgB [Acidiphilium multivorum
AIU301]
gi|325051388|dbj|BAJ81726.1| flagellar basal-body rod protein FlgB [Acidiphilium multivorum
AIU301]
Length = 126
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +A+ +L++ Q ++++NIAN TP Y ++ +F LN +A + L
Sbjct: 3 LNLIGLAADRLVYLAQSQSVLAQNIANIDTPGYVSRMPVAFSDTLNGTGNLALATTSALD 62
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SSG GN V + ++L + + + K M
Sbjct: 63 IPSSSGQSVGTETATVAARAP-----DGNAVSLESQLAAVAGTQINQQYAVNIYKTYLGM 117
Query: 124 VMHVV 128
+
Sbjct: 118 FTTAL 122
>gi|149375037|ref|ZP_01892810.1| Flagellar basal body protein [Marinobacter algicola DG893]
gi|149360926|gb|EDM49377.1| Flagellar basal body protein [Marinobacter algicola DG893]
Length = 132
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
I +R ++++ N+ANA TP Y+A+D+ F+ ++ + F M RTHE+
Sbjct: 9 LGIHQHALEGRIKRAEVLANNLANADTPGYKARDV-DFQAMMQKAQDSMSGFGMTRTHES 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ S E V GNTV E + Y+ + + +
Sbjct: 68 HMDTSSMGADS------ELLYRVPHQPSVDGNTVDAQQEQTRFMRNAMDYQASFQFLDGK 121
Query: 121 NSMVMHVVRG 130
S + + G
Sbjct: 122 VSGIKKALSG 131
>gi|322379368|ref|ZP_08053739.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
gi|322380861|ref|ZP_08054951.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
gi|321146712|gb|EFX41522.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
gi|321148186|gb|EFX42715.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
Length = 140
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 18/140 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------ 48
M + + + ++ S RQ +++ NIAN TP YR +D+ FET+L
Sbjct: 1 MNLSKAYPLVYEAMDYRSLRQDLIASNIANVDTPFYRPRDV-DFETMLAHKKAEVFDHKK 59
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+Q +A+T++ HL S + + GN+V + E + G
Sbjct: 60 DQILQLAKTNKRHLSPGLS-----ESQKATLFFRDGHLAKNDGNSVDLDIETSEMGKNST 114
Query: 109 LYELNTKLIKKLNSMVMHVV 128
+Y T +KK +V + +
Sbjct: 115 MYLALTTALKKHRGIVNYAI 134
>gi|317011795|gb|ADU85542.1| flagellar basal body rod protein FlgB [Helicobacter pylori
SouthAfrica7]
Length = 140
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +S + + L + GN+V + E + G +
Sbjct: 61 KVLPLAHTNPKHLDFENSINDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK +V + +
Sbjct: 116 YLALSSALKKYRGIVNYAI 134
>gi|221199736|ref|ZP_03572779.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2M]
gi|221208659|ref|ZP_03581659.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2]
gi|221215568|ref|ZP_03588531.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD1]
gi|221164556|gb|EED97039.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD1]
gi|221171470|gb|EEE03917.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2]
gi|221179975|gb|EEE12379.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
CGD2M]
Length = 162
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFASTLARSLKQANGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
MA T H+ + + A + GNTV +
Sbjct: 68 LPLAQPAGVTSGMTMASTAPGHMAGTVKLIPTGGPSDDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 159
>gi|186477694|ref|YP_001859164.1| flagellar basal body rod protein FlgB [Burkholderia phymatum
STM815]
gi|184194153|gb|ACC72118.1| flagellar basal-body rod protein FlgB [Burkholderia phymatum
STM815]
Length = 163
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 31/153 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------------ 48
F Q + + RQ+++S NIAN+ TP Y+A+DI F + L
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANSDTPGYKARDI-DFASSLAGALKKSGGSTAGASNNS 67
Query: 49 ----------NQNFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+Q MA T H+ + + GNTV +
Sbjct: 68 QLAMTQPAGVSQGMSMASTEPGHMTGKARLVATGGPTDDFGRVAYRIPAQPSLDGNTVDL 127
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + +E ++ + ++ +
Sbjct: 128 DAERVQFADNSLHFESGMTVLSQQIKAMLSAIT 160
>gi|308173580|ref|YP_003920285.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens DSM 7]
gi|307606444|emb|CBI42815.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens DSM 7]
gi|328911721|gb|AEB63317.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens LL3]
Length = 129
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+QK+++ NIAN TPNY+AK + SF +L+Q +T + D +
Sbjct: 11 LENALGRADIKQKVITNNIANIDTPNYKAKKV-SFRNLLDQETSNLEAVKTDYRHVDFTD 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ ++ + T Q +GN V I E+ + Y+ + + + + V+
Sbjct: 70 SGADYSIVSSG---DTSYQQNGNNVDIDKEMTDLAENQINYQALVERMSGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|120598229|ref|YP_962803.1| flagellar basal body rod protein FlgB [Shewanella sp. W3-18-1]
gi|120558322|gb|ABM24249.1| flagellar basal-body rod protein FlgB [Shewanella sp. W3-18-1]
Length = 134
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------AR 56
+ +ER +++S NIANA TP+Y+A+D+ F +
Sbjct: 7 NALGVHQYTLGIRAERAEVISSNIANADTPHYKARDV-DFSAAMQAARSQQQQRNHLDMG 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+E H ++ +G + P TG GNTV I E Y+++
Sbjct: 66 DNERHFGLAELTGQYVK---FRVPNQPDTG---DGNTVDIQQEQSAFMQNALEYQMSLGF 119
Query: 117 IKKLNSMVMHVVRG 130
+ S + +RG
Sbjct: 120 LDSKFSGMKKALRG 133
>gi|332531615|ref|ZP_08407512.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
19624]
gi|332038978|gb|EGI75407.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
19624]
Length = 161
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 32/156 (20%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---------- 54
+ SERQ+ ++ NIAN TP Y+A+D F++ + +
Sbjct: 7 GTLDFHGKALVLRSERQRTIASNIANGDTPGYQARDF-DFKSAMQEALGQTDAKLTQPST 65
Query: 55 --------------------ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
T H+ S+G + NTV
Sbjct: 66 LNISGTAAGTYAPGNTPAVAGATDPRHIPLPRSTGQGGLGD-DGMGYRDQIQPAMDNNTV 124
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ E YE + I + ++ ++G
Sbjct: 125 DMDRERSNFVDNSIRYESTLRFINGYSKTILSAIQG 160
>gi|317052364|ref|YP_004113480.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
S5]
gi|316947448|gb|ADU66924.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
S5]
Length = 141
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL----------MART 57
+ + S+ Q +++ N+ANA TPNY+AK++ FE L + L MART
Sbjct: 13 NLLATSMTVRSKNQDVIATNVANAETPNYKAKELV-FEDQLREAVLGRKEDKEMIPMART 71
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
HE+HL L V+ GN V + E+ + +Y+ +T +
Sbjct: 72 HESHLPTGAKPAFMPYMQ-----LQHNQTVRNDGNDVELEKEIGRMMENATMYQASTTIA 126
Query: 118 KKLNSMVMHVV 128
K + +
Sbjct: 127 AKKIEGLKSAI 137
>gi|294339846|emb|CAZ88209.1| putative Flagellar basal-body rod protein flgB (Putative proximal
rod protein) [Thiomonas sp. 3As]
Length = 135
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F N ++RQ+++S NIANA+TP Y+A D+ F +T LK +
Sbjct: 9 FAPLQTALNLRAQRQQLLSANIANANTPGYKAVDV-DFSAAFKAALSGQQTGGLPLKTEN 67
Query: 67 SSGLHWNAHVIEA---PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ L N + V ++GN+V + E YE + +
Sbjct: 68 ARQLAGNVAPAGSNFIAYQAGNNVSLNGNSVDMNREQAAFQKNSIQYEADLTFLTGKIKT 127
Query: 124 VMHVVRG 130
+ + G
Sbjct: 128 LTSAITG 134
>gi|330818588|ref|YP_004362293.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli BSR3]
gi|327370981|gb|AEA62337.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli BSR3]
Length = 162
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFGATLGRALKQQAGQATTDNATR 67
Query: 51 -----------NFLMARTHETHLKESDSSGLHWNA--HVIEAPLDQTTGVQVSGNTVGIT 97
+ T H+ A + + GNTV +
Sbjct: 68 LPLAQPAGVTSGMTLVSTAPGHMSGDTRLAATGGPVEDYGRAAYRIPSQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + +E L+ ++ ++
Sbjct: 128 AERVQFADNTVHFETGMTLVSGQIKAMLAAIQ 159
>gi|296135676|ref|YP_003642918.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12]
gi|295795798|gb|ADG30588.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12]
Length = 135
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F N ++RQ+++S NIANA+TP Y+A D+ F +T LK +
Sbjct: 9 FAPLQTALNLRAQRQQLLSANIANANTPGYKAVDL-DFSAAFKAALSGQQTGGLPLKTEN 67
Query: 67 SSGLHWNAHVIEA---PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ L N + V ++GN+V + E YE + +
Sbjct: 68 ARQLAGNVAPAGSNFIAYQAGNNVSLNGNSVDMNREQAAFQKNSIQYEADLTFLTGKIKT 127
Query: 124 VMHVVRG 130
+ + G
Sbjct: 128 LTSAITG 134
>gi|109948141|ref|YP_665369.1| flagellar basal body rod protein FlgB [Helicobacter acinonychis
str. Sheeba]
gi|109715362|emb|CAK00370.1| flagellar basal-body rod protein FlgB [Helicobacter acinonychis
str. Sheeba]
Length = 140
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----------FETILN 49
M F + + ++ + RQ +++ NIAN TP YR KD+ FE +
Sbjct: 1 MDFSKAFGLVYRALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLAKKKAEIFENQSS 60
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +A T+ HL +++ + + L + GN+V + E + G +
Sbjct: 61 KILPLAHTNPKHLDFENNANDGASLFFRDGHLAKN-----DGNSVDLDIETSEMGKNSTM 115
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y + +KK +V + +
Sbjct: 116 YLALSSALKKYRGIVNYAI 134
>gi|323527716|ref|YP_004229869.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
gi|323384718|gb|ADX56809.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
Length = 163
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 31/153 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F + + + RQ+++S NIANA TP Y+A+D+ F + L
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDV-DFASSLAGALKKTGATGHAASNTA 67
Query: 51 ------------NFLMARTHETHLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
MA T H+ + S+ + T + GNTV I
Sbjct: 68 ALPMAQPAGVTSGMSMAATAPGHMSGKSTLSAAGGTSDDYGNLQYRVPTQPALDGNTVDI 127
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + +E ++ ++ ++
Sbjct: 128 DTERVQFADNTLHFESGMTVLSNQIKTMLSAIQ 160
>gi|187925764|ref|YP_001897406.1| flagellar basal body rod protein FlgB [Burkholderia phytofirmans
PsJN]
gi|187716958|gb|ACD18182.1| flagellar basal-body rod protein FlgB [Burkholderia phytofirmans
PsJN]
Length = 164
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 32/154 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYKARDV-DFASSLAGALKKSGSATGTAASNN 67
Query: 51 -------------NFLMARTHETHLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVG 95
M T H+ + + + T + GNTV
Sbjct: 68 ATLAMTQPAGVTSGMSMVSTAPGHMAGKSTLTPTGGPSDDYGNLQYRVPTQPALDGNTVD 127
Query: 96 ITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
I E + +E ++ ++ ++
Sbjct: 128 IDTERVQFADNTLHFESGMTVLSSQIKTMLSAIQ 161
>gi|311694358|gb|ADP97231.1| fFlagellar basal-body rod protein FlgB [marine bacterium HP15]
Length = 139
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
I +R ++++ N+ANA TP ++A+D+ F+ ++ + F MA+TH+
Sbjct: 16 LGIHQHAVEARVKRAEVLANNLANADTPGFKARDL-DFQAMMQKAQEQVSGFQMAKTHDA 74
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ S S+ + + V GNTV E + ++ + + +
Sbjct: 75 HMDTSPSASESDLMYRV------PHQPSVDGNTVDAQQEQTRFMRNAMDFQASFQFLNSK 128
Query: 121 NSMVMHVVRG 130
S + ++G
Sbjct: 129 FSGLTKALKG 138
>gi|264676567|ref|YP_003276473.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|299531289|ref|ZP_07044699.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44]
gi|262207079|gb|ACY31177.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|298720696|gb|EFI61643.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44]
Length = 137
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHET 60
S+ +ERQ+ ++ NIANA TP Y A+D + E ++ + T
Sbjct: 9 LDFQSEALLLRAERQRAIASNIANADTPGYVARDFNFREALMAATSGPKPLTQASVTTAG 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + + A + + + NTV + E YE + I
Sbjct: 69 HIPL--QAQMSDEALKAKLGYSVNSQPSLDNNTVDLDRERANFVDNSVRYEATLRFINGQ 126
Query: 121 NSMVMHVVRG 130
++ ++G
Sbjct: 127 AKTMLSAIQG 136
>gi|148546703|ref|YP_001266805.1| flagellar basal body rod protein FlgB [Pseudomonas putida F1]
gi|148510761|gb|ABQ77621.1| flagellar basal-body rod protein FlgB [Pseudomonas putida F1]
gi|313497758|gb|ADR59124.1| FlgB [Pseudomonas putida BIRD-1]
Length = 136
Score = 81.5 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN--------FLMARTH 58
I + + ++R ++++ NIANA TPNY+A+D+ F ++L F M RT+
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDM-DFSSVLAAETSKQQGGRFAMDRTN 67
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H++ + + PL + NTV E ++ + L+
Sbjct: 68 SRHIEAEGLAIAADDTLKYRTPLQPSI----DQNTVDAQIEQSNYTENAIGFQASFTLLN 123
Query: 119 KLNSMVMHVVRG 130
++ +RG
Sbjct: 124 SKFKGLVSALRG 135
>gi|126441479|ref|YP_001057319.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
668]
gi|126220972|gb|ABN84478.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
668]
Length = 163
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-------- 58
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGAASAGNAAQL 67
Query: 59 --------ETHLKESDSSGLHWNAHVI------------EAPLDQTTGVQVSGNTVGITN 98
+ + + +SG H +V A + GNTV +
Sbjct: 68 PLAQPAGVASGMSMATTSGAHLAGNVKLIPTGGPSDDYGRAQYRMPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + Y+ ++ + ++ +
Sbjct: 128 ERVQFADNAVHYQAGMTVMTQQIKTMIAAIT 158
>gi|288573036|ref|ZP_06391393.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568777|gb|EFC90334.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 131
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETH 61
++ + L+ R + V +N+ANA+TP Y +++ SFE L+ + MA T H
Sbjct: 7 KVMEKDLQGLAHRFRSVGQNLANANTPGYARREV-SFEDQLDDIVNGPKRLPMATTDPKH 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + ++ N V E+ K K YE T+L+ K
Sbjct: 66 M---TTHARSVEEVTPREDRIPDQLYRLDRNNVDPEIEMAKLAETKMGYEAMTRLVSKKV 122
Query: 122 SMVMHVVRG 130
S + G
Sbjct: 123 SGYKTAMGG 131
>gi|332533178|ref|ZP_08409047.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037460|gb|EGI73914.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
haloplanktis ANT/505]
Length = 135
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-------NQNFLMARTHE 59
+ Q S+R ++++ NIANA TP Y+AKDI F + L M RT++
Sbjct: 9 LGVHPQAMLIRSQRAELIATNIANADTPGYKAKDI-DFASALKAARSTQQSGNTMVRTND 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S ++ P TG GN+V I E Y+ + + +
Sbjct: 68 KHIGGGTHS--MGSSESFRLPNQSDTG---DGNSVDIQVERNLYTQNAMEYQASLQFLSG 122
Query: 120 LNSMVMHVV 128
+ +
Sbjct: 123 KFKGLNKAL 131
>gi|332140543|ref|YP_004426281.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
'Deep ecotype']
gi|327550565|gb|AEA97283.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
'Deep ecotype']
Length = 144
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------- 52
+ER +++S N+ANA+TP Y+A+DI F +
Sbjct: 8 LVGFNESALKIRTERMEVISGNLANANTPGYKARDI-DFNKAMQSAMHEASSSSSSRASS 66
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ RT++ HL + +S P TG GNTV + E + Y+
Sbjct: 67 GLVRTNDRHLSGNSTSVAANFDMQYRIPTQPDTG---DGNTVEVQAERNRFLDNGLRYQA 123
Query: 113 NTKLIKKLNSMVMHVV 128
+ + + + +
Sbjct: 124 SLEFLNGKIKGMKKAL 139
>gi|148261125|ref|YP_001235252.1| flagellar basal body protein-like protein [Acidiphilium cryptum
JF-5]
gi|146402806|gb|ABQ31333.1| Flagellar basal body protein-like protein [Acidiphilium cryptum
JF-5]
Length = 126
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +A+ +L++ Q ++++NIAN TP Y ++ +F LN +A L
Sbjct: 3 LNLIGLAADRLVYLAQSQSVLAQNIANIDTPGYVSRMPVAFSDTLNGTGNLALATTNALD 62
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SSG GN V + ++L + + + K M
Sbjct: 63 IPSSSGQSVGTETATVAARAP-----DGNAVSLESQLAAVAGTQINQQYAVNIYKTYLGM 117
Query: 124 VMHVV 128
+
Sbjct: 118 FTTAL 122
>gi|325567534|ref|ZP_08144201.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
ATCC 12755]
gi|325158967|gb|EGC71113.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
ATCC 12755]
Length = 158
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + + N ++R +++S NIAN +T Y+AK I FE+ L Q + T
Sbjct: 40 LDTYDLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIV-FESELKQALASSGTD----A 94
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+++S + E + TT ++ +GN V + E+ Y T + M
Sbjct: 95 VTEASVSQVKPKITE---NATTSIKDNGNNVDLEVEMLDQAANGLYYSALTAQVNGRLQM 151
Query: 124 VMHVV 128
+ V+
Sbjct: 152 MNLVL 156
>gi|321445153|gb|EFX60611.1| hypothetical protein DAPPUDRAFT_342411 [Daphnia pulex]
Length = 136
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 2/126 (1%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+Q SERQ++++ NIANA TP Y+A+D+ F + L + AR +
Sbjct: 7 DTLNFQTQALVLRSERQRLLASNIANADTPGYKARDM-DFASALREATGAARGGAMAATQ 65
Query: 65 SDS-SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ S + + + NTV + E YE + I
Sbjct: 66 AGHISPPAGARSEAKLLWAAPSQTNLDNNTVDMDRERASFADNSIKYEATLRFINSSVRT 125
Query: 124 VMHVVR 129
+ ++
Sbjct: 126 TLDSMK 131
>gi|323341389|ref|ZP_08081633.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
25644]
gi|323091266|gb|EFZ33894.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
25644]
Length = 121
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---MARTHET 60
+ + + + R +++S NIAN +TPNY+AK + FE+ L+Q + TH+
Sbjct: 1 MDTYNLLKTAMDVSQTRSELISNNIANVNTPNYKAKRVV-FESQLSQAMDSLNLTETHKN 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H++ +SG + + TG Q +GN V + E+ Y T +
Sbjct: 60 HMQTGGTSGPYIT--------SRNTGFQKNGNNVDVDTEMVNQAQNGLYYSAITSQLNGR 111
Query: 121 NSMVMHVV 128
M+ +V+
Sbjct: 112 YKMMNYVI 119
>gi|16078681|ref|NP_389500.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309493|ref|ZP_03591340.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313818|ref|ZP_03595623.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318742|ref|ZP_03600036.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323013|ref|ZP_03604307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
subtilis str. SMY]
gi|120292|sp|P24500|FLGB_BACSU RecName: Full=Flagellar basal-body rod protein flgB
gi|142915|gb|AAA22441.1| flgB [Bacillus subtilis]
gi|2633990|emb|CAB13491.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. subtilis str. 168]
Length = 129
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ +QK+++ NIAN TPNY+AK + SF+ +L+Q +T + D S
Sbjct: 11 LENALSRADIKQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLEAIKTDYRHVDFSD 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N ++ + T Q +GN V + E+ + + Y+ + + + + V+
Sbjct: 70 TDSNYSIVASG---DTSYQQNGNNVDVDKEMTELAQNQINYQALVERMNGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|167630286|ref|YP_001680785.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
modesticaldum Ice1]
gi|167593026|gb|ABZ84774.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
modesticaldum Ice1]
Length = 137
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 12/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMART 57
+ + + S R +++++N+AN TP Y+ K++ FE L R+
Sbjct: 8 PILRSLEKGLDAASTRHQVIADNLANVDTPGYKRKEVQ-FEDELAAVIDREASGMTGKRS 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ + + ++ + GN V + E+ Y I
Sbjct: 67 DPRHIPLNGG----IGDLSVRVVTQESESFRNDGNNVDVDREMALLAKNSLWYNGMINTI 122
Query: 118 KKLNSMVMHVVRG 130
S + +V++G
Sbjct: 123 SHKLSGIKNVLQG 135
>gi|78043872|ref|YP_359837.1| flagellar basal-body rod protein FlgB [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995987|gb|ABB14886.1| flagellar basal-body rod protein FlgB [Carboxydothermus
hydrogenoformans Z-2901]
Length = 136
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMARTHE 59
+ + + + RQ+ ++ NIAN +TP YR K++ FE + + NF + TH
Sbjct: 9 YNLLKLGIDAATIRQQAIAHNIANVNTPGYR-KEVVVFEEKVQEFLNQKKGNFSLKTTHP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL S E + +T +++ N V I E+ + + YE + +K
Sbjct: 68 RHLTAKGFS-----LPFAEIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERLKG 122
Query: 120 LNSMVMHVVRG 130
+ + V+ G
Sbjct: 123 TLASLEMVITG 133
>gi|296282282|ref|ZP_06860280.1| flagellar basal-body rod protein FlgB [Citromicrobium bathyomarinum
JL354]
Length = 115
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I ++R ++ NIANA TP Y+A+DI F L L
Sbjct: 4 GLFGIHGAALEIRAQRMAVLGSNIANAGTPGYKARDI-DFGAALQ----------ARLAG 52
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S+S G A V P T + GNTV + E Y +K +
Sbjct: 53 SESEGAAQRATVYRIP----TMASLDGNTVEMGTEQAAFAENAVAYTATLGFLKGRVETL 108
Query: 125 MHVVRG 130
+RG
Sbjct: 109 TRAIRG 114
>gi|170722895|ref|YP_001750583.1| flagellar basal body rod protein FlgB [Pseudomonas putida W619]
gi|169760898|gb|ACA74214.1| flagellar basal-body rod protein FlgB [Pseudomonas putida W619]
Length = 136
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + ++R ++++ NIANA TPNY+A+D+ F ++L ++
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDM-DFSSVLAAESQKQQS-GGRFAMDR 66
Query: 67 SSGLHWNAHVIEAPLD-----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + D T + NTV E ++ + L+
Sbjct: 67 TNSRHIEAEGLAMADDTLQYRTPTQPSIDQNTVDAQIEQSNYTENAIGFQASFTLLNSKF 126
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 127 KGLVSALRG 135
>gi|291484169|dbj|BAI85244.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
natto BEST195]
Length = 129
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ +QK+++ NIAN TPNY+AK + SF+ +L+Q +T + D S
Sbjct: 11 LENALSRADIKQKVITNNIANIDTPNYKAKKV-SFQNLLDQESSRLEAIKTDYRHVDFSD 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N ++ + T Q +GN V + E+ + + Y+ + + + + V+
Sbjct: 70 ADSNYSIVASG---DTSYQQNGNNVDVDKEMTELAQNQINYQALVERMNGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|221069325|ref|ZP_03545430.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni KF-1]
gi|220714348|gb|EED69716.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni KF-1]
Length = 137
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHET 60
S+ +ERQ+ ++ NIANA TP Y A+D + E ++ + T
Sbjct: 9 LDFQSEALLLRAERQRAIASNIANADTPGYVARDFNFREALMAATSGPKPLTQASVTTAG 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + + A + + + NTV + E YE + I
Sbjct: 69 HIPL--QAQMSDEALKAKLGYAVNSQPSLDNNTVDLDRERANFVDNSVRYEATLRFINGQ 126
Query: 121 NSMVMHVVRG 130
++ ++G
Sbjct: 127 AKTMLSAIQG 136
>gi|167579485|ref|ZP_02372359.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
TXDOH]
Length = 163
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 51/151 (33%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGAASAGNAAAL 67
Query: 51 ----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGITN 98
MA T HL + + A + GNTV +
Sbjct: 68 PLAQPAGVTSGMSMATTSSAHLAGNVKLIPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + ++ ++ + ++ +
Sbjct: 128 ERVQFADNAVHFQAGMTVLTQQIKTMIAAIT 158
>gi|125972983|ref|YP_001036893.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
ATCC 27405]
gi|125713208|gb|ABN51700.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
ATCC 27405]
Length = 134
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKE 64
+ + + R + +S+NIAN T Y+ K ++ FE LN RT H+
Sbjct: 10 DVLEKSLDAALLRNEAISQNIANVDTTGYKRKTVA-FEEYLNDARAKIKGIRTRPEHIPV 68
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + V E + +++ N V I E+ + Y L T+ I + +
Sbjct: 69 GARDVMDIDIKVSED--RSSLSMRLDENNVDIEEEMAQMAKNTIKYYLLTQKISGDFNKI 126
Query: 125 MHVVR 129
V++
Sbjct: 127 KSVIK 131
>gi|148554192|ref|YP_001261774.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii RW1]
gi|148499382|gb|ABQ67636.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii RW1]
Length = 115
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I + S+R +++ NIANA+TPNY+A+DI F+ L+ +
Sbjct: 4 PLFGIHGKALELRSQRLSMLASNIANAATPNYKARDI-DFQKALSDATD-------GMSA 55
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ ++ H V + GNTV ++ E + Y+ ++ V
Sbjct: 56 AQAADAHIGYRV-------PLETSLDGNTVELSTEQNQFAENALRYKTTLSFLEGRIGTV 108
Query: 125 MHVVRG 130
M ++G
Sbjct: 109 MQALKG 114
>gi|189426356|ref|YP_001953533.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
gi|189422615|gb|ACD97013.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
Length = 146
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 18/139 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------ 52
T + + + + Q ++S NIANA TP Y K + FE L
Sbjct: 9 TTIDVLGKSIDLRTRNQNLISSNIANAETPGYTPKSLE-FEQQLQSAVKKSTTRRGDSQF 67
Query: 53 LMARTHETHLKESDSSGLHWNAH--VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
A TH H+ V+E P GN+V + NE+ + + L+
Sbjct: 68 SGATTHPAHIPLRGGGERISQVRGTVVETPAKTPGR---DGNSVEMENEMSRMMQNQVLF 124
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+ +L+ K + +R
Sbjct: 125 NASVQLLSKKFEGLRTALR 143
>gi|192360466|ref|YP_001982403.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
Ueda107]
gi|190686631|gb|ACE84309.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
Ueda107]
Length = 133
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHET 60
I + SER +++ N+AN TPNY+A+D+ F+ L Q +A T+E
Sbjct: 9 LGIHESALKFRSERASVLANNLANIDTPNYKARDV-DFKQALGQQMKKAERFDVATTNEK 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ S G+ + P + GNTV E + ++ + + +
Sbjct: 68 HIPASTFVGVD-EGLLYRVPQQPSI----DGNTVEDQIEHAEYMKNALAFQASFQFLNSK 122
Query: 121 NSMVMHVVRG 130
S + +RG
Sbjct: 123 FSGLRSAIRG 132
>gi|54307267|ref|YP_128287.1| flagellar basal body rod protein FlgB [Photobacterium profundum
SS9]
gi|46911687|emb|CAG18485.1| Hypothetical FlgB putative flagellar basal-body rod protein
[Photobacterium profundum SS9]
Length = 139
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + ++R K+++ N+AN TPNY+A+DI SFE ++Q AR
Sbjct: 23 LGVHPNTLAFRTQRAKVLASNLANVDTPNYKARDI-SFEDAMSQIAGEARAKHQ------ 75
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ IE GNTV + E K +E + + S +
Sbjct: 76 -ARFRSQPPKIELLYRNPQQPAQDGNTVELGIEQAKFASNAMAFETSMSFLNMKISGLKQ 134
Query: 127 VVRG 130
++G
Sbjct: 135 AIKG 138
>gi|167835108|ref|ZP_02461991.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
MSMB43]
Length = 163
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 29/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE------- 59
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFSSTLARALKQDGAASAGNGATL 67
Query: 60 ---------THLKESDSSGLHWNAHVI------------EAPLDQTTGVQVSGNTVGITN 98
+ + + +SG H +V A + GNTV +
Sbjct: 68 PLAQPAGVTSGMSMAATSGAHLAGNVKLIPTGGPSDDYGRAQYRIPQQPALDGNTVDLDT 127
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + Y+ + + ++ +
Sbjct: 128 ERVQFADNAVHYQAGMTAMTQQIKTMIAAIT 158
>gi|325274805|ref|ZP_08140832.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51]
gi|324100050|gb|EGB97869.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51]
Length = 136
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN--------FLMARTH 58
I + + ++R ++++ NIANA TPNY+A+D+ F ++L F M RT+
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDM-DFSSVLAAETSKQQSGRFAMERTN 67
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H++ + + PL + NTV E ++ + L+
Sbjct: 68 SRHIEAEGLAVAADDTLKYRTPLQPSI----DQNTVDAQIEQSNYTENAIGFQASFTLLN 123
Query: 119 KLNSMVMHVVRG 130
++ +RG
Sbjct: 124 SKFKGLVSALRG 135
>gi|258511368|ref|YP_003184802.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478094|gb|ACV58413.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 134
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+T F++ + + RQ + + NIANA TP Y+ +D++ FET+L ++
Sbjct: 1 MTVFELLQSALDASTLRQAVYANNIANAGTPGYKRQDVA-FETLLQSALGSGDSNALGEA 59
Query: 64 ESDSSGLHWNAHVIEAP-------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + + P D +T V +GN V IT E+ + Y+ +
Sbjct: 60 QIPIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRYDTLVQD 119
Query: 117 IKKLNSMVMHVVRG 130
I + + G
Sbjct: 120 ISDRLDRLRTAIMG 133
>gi|326204629|ref|ZP_08194485.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
DSM 2782]
gi|325985196|gb|EGD46036.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
DSM 2782]
Length = 137
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETHL 62
+ + N R +++S+N+AN TPNY+ KD++ FE LN + R T E H+
Sbjct: 10 NLLEKSLNASWARNEVISQNLANVDTPNYKRKDVT-FEEYLNDSLDSKRLEGNTTDERHI 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + + + T +++ GN V I +E+ Y ++I S
Sbjct: 69 PIKSKNTDKIKPEITQD--NSDTSMRIDGNNVDIDSEMAYLAKNTIQYNSLIQMINSNYS 126
Query: 123 MVMHVV 128
+ +V+
Sbjct: 127 RIKNVI 132
>gi|42524766|ref|NP_970146.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus
HD100]
gi|39576976|emb|CAE78205.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus
HD100]
Length = 136
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 10/122 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETHLKESDS 67
+ R + S NIANA TP Y AK + FE L + ++ ++ H
Sbjct: 16 LSMRQLRHNVTSSNIANAETPGYHAKKM-DFEGALQRALDLDGANSLSTSNPEHFAVGGI 74
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S + + P V GNTV + E+ +Y+ +LI K + + +
Sbjct: 75 SVSKTRPDIYDDP---EGAVNNDGNTVDVEKEMSALSENAIMYKAALQLINKKMAALKYA 131
Query: 128 VR 129
Sbjct: 132 AT 133
>gi|161526189|ref|YP_001581201.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
ATCC 17616]
gi|189349095|ref|YP_001944723.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
ATCC 17616]
gi|160343618|gb|ABX16704.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
ATCC 17616]
gi|189333117|dbj|BAG42187.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
17616]
Length = 162
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP YRA+D+ F + L
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFASTLAHSLKQANGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + + A + GNTV +
Sbjct: 68 LPLAQPAGVTSGMTMVSTAPGHMAGTVKLIPTGGPSDDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALRYETGMTVMTQQIKAMIAAIT 159
>gi|90423028|ref|YP_531398.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
BisB18]
gi|90105042|gb|ABD87079.1| flagellar basal body rod protein [Rhodopseudomonas palustris
BisB18]
Length = 136
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 15/123 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQN---- 51
+ + W ERQ+++++NIAN+ TP ++ +++ + +
Sbjct: 3 INDLPVLSALRTKMQWHQERQRVLADNIANSDTPGFKPRELIEPKFTPSGQLAAGGPMGS 62
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
M RT +H+ + + + +GN V + +E+ K+ + Y
Sbjct: 63 LPMLRTSASHISAAGG------IESFAQDRNSGFQTRPAGNAVNLEDEMLKTSSNQMDYA 116
Query: 112 LNT 114
T
Sbjct: 117 AAT 119
>gi|325288805|ref|YP_004264986.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus
DSM 8271]
gi|324964206|gb|ADY54985.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus
DSM 8271]
Length = 132
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
I + LS R K++++NIAN TPN++ D+ +FE +L + + +
Sbjct: 9 VLNILEGGLDGLSLRNKVLADNIANVDTPNFKKSDV-NFEAVLQEAIGEDQALPMKMSLP 67
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ D +T ++ GN V + E+ K Y + + +M+
Sbjct: 68 GHLPGVGASAGTVVLQDNSTTIRNDGNNVDVDLEMSKVAENTLHYNALAQALISQFTMLK 127
Query: 126 HVVR 129
+R
Sbjct: 128 QAMR 131
>gi|206558965|ref|YP_002229725.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
J2315]
gi|198035002|emb|CAR50874.1| flagellar basal-body rod protein FlgB (putative proximal rod
protein) [Burkholderia cenocepacia J2315]
Length = 162
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQTSGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + A + GNTV +
Sbjct: 68 LPMTQPAGVTSGMSMVSTAPGHMAGTAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 159
>gi|167585191|ref|ZP_02377579.1| flagellar basal body rod protein FlgB [Burkholderia ubonensis Bu]
Length = 162
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFSSTLARSLKQVNGGVAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
MA T H+ + Q T + GNTV +
Sbjct: 68 LPLAQPAGVTSGMTMASTAPGHMAGNAKLIPTGGPADDYGRPQYRQPTQPALDGNTVELD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYESGMTVMTQQIKAMIAAIT 159
>gi|114562339|ref|YP_749852.1| flagellar basal body rod protein FlgB [Shewanella frigidimarina
NCIMB 400]
gi|114333632|gb|ABI71014.1| flagellar basal-body rod protein FlgB [Shewanella frigidimarina
NCIMB 400]
Length = 132
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+ ++R +++S NIANA+TP+Y+A+D+ +F + + + M++T
Sbjct: 7 NALGVHQYSLGVRAQRAEVISSNIANANTPHYKAQDV-NFASAMQAASSHQKGLSMSQTT 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H + S H P TG GNTV E Y+++ ++
Sbjct: 66 EKHFDLTALSQQHVQ---YRMPNQADTG---DGNTVDTQKEQAAFMQNALEYQMSLGFLE 119
Query: 119 KLNSMVMHVVRG 130
+ + +RG
Sbjct: 120 GKFNGMRKALRG 131
>gi|157738172|ref|YP_001490856.1| flagellar basal body rod protein FlgB [Arcobacter butzleri RM4018]
gi|315636315|ref|ZP_07891565.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
gi|157700026|gb|ABV68186.1| flagellar basal body rod protein FlgB [Arcobacter butzleri RM4018]
gi|315479404|gb|EFU70087.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
Length = 132
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ART 57
M+ + N+ E+QK++S NIAN +TPNY+ KD+ F+ L++N M RT
Sbjct: 1 MEASKVTGNLFEQLNFRGEKQKVISSNIANVNTPNYKTKDLV-FQEELDKNSNMLQLKRT 59
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ D + + L + Q GN V + +++ + K L++ I
Sbjct: 60 TNNHMYNLDFTQSSNQKLIQVPGLVE----QNDGNNVNLDSQMSEQSKNKILFDGIQATI 115
Query: 118 KKLNSMVMHVV 128
K+ +++ V+
Sbjct: 116 KRDSNLFKSVI 126
>gi|308094613|ref|ZP_05890642.2| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AN-5034]
gi|308090130|gb|EFO39825.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AN-5034]
Length = 172
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I +++S NIA A+TP Y+A+ + F L A T + S
Sbjct: 50 LGIHQHTVGVRERNAEVISTNIAQANTPGYKARGL-DFAKELQ-----AATSGASIGLSR 103
Query: 67 SSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ G H A P TG GNTV + E + ++ + +
Sbjct: 104 TDGRHIPATTTLMGDKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFLGG 160
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 161 KFKNLTKAIKG 171
>gi|254251188|ref|ZP_04944506.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
gi|124893797|gb|EAY67677.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
Length = 173
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP YRA+D+ F + L +
Sbjct: 19 FAFGRQALDVRAYRQELLSSNIANADTPGYRARDV-DFASTLARSLKQANGGLAPSNAAQ 77
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
MA T H+ + A + GNTV +
Sbjct: 78 LPMTQPAGVTSGMTMASTAPGHMAGTVKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 137
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 138 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 169
>gi|218288291|ref|ZP_03492590.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius LAA1]
gi|218241650|gb|EED08823.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
acidocaldarius LAA1]
Length = 134
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+T F++ + + RQ + + NIANA TP Y+ +D++ FET+L ++
Sbjct: 1 MTVFELLQSALDASTLRQAVYANNIANAGTPGYKRQDVA-FETLLQSALGSGDSNALGEA 59
Query: 64 ESDSSGLHWNAHVIEAP-------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + + P D +T V +GN V IT E+ + Y+ +
Sbjct: 60 QIPIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRYDTLAQD 119
Query: 117 IKKLNSMVMHVVRG 130
I + + G
Sbjct: 120 ISDRLVRLRTAIMG 133
>gi|68164549|gb|AAY87278.1| predicted flagellar proximal rod protein [uncultured bacterium
BAC17H8]
Length = 128
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETH 61
+ + + ++R KI++ NIANA+TPN++A+DI +F+ ++N++ + T H
Sbjct: 6 DYLNLHATALTVRAKRNKILASNIANAATPNFKARDI-NFQALINKSEGEGPIRATDARH 64
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
K S A + GNTV + E + Y+ +
Sbjct: 65 FKVS------LEASAEKMKYRTPVNPSRDGNTVEMNVEQMEFSENVMRYQTTLTFLNNKI 118
Query: 122 SMVMHVVRG 130
+ + +RG
Sbjct: 119 NGLRSAIRG 127
>gi|107023956|ref|YP_622283.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia AU
1054]
gi|116691043|ref|YP_836666.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
HI2424]
gi|105894145|gb|ABF77310.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia AU
1054]
gi|116649132|gb|ABK09773.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
HI2424]
Length = 162
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQTSGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + A + GNTV +
Sbjct: 68 LPMAQPAGVTSGMSMVSTAPGHMAGTAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 159
>gi|296157459|ref|ZP_06840294.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
gi|295892231|gb|EFG72014.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
Length = 164
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 32/154 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F + + + RQ+++S NIANA TP Y+A+D+ F + L
Sbjct: 9 FAFGREALDVRAYRQELLSSNIANADTPGYKARDV-DFASSLAGALKKAGGSAGTAASNN 67
Query: 51 -------------NFLMARTHETHLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVG 95
M T H+ + + + T + GNTV
Sbjct: 68 STLAMTQPAGVTSGMSMVSTAPGHMAGKSTLTPTGGTSDDYGNLQYRVPTQPALDGNTVD 127
Query: 96 ITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
I E + +E ++ ++ ++
Sbjct: 128 IDTERVQFADNTLHFESGMTVLSSQIKTMLSAIQ 161
>gi|289627760|ref|ZP_06460714.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651650|ref|ZP_06482993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330866419|gb|EGH01128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 137
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDL-DFSSVL--AAENDKVQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPLDQ-------TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++ H + D + + NTV E ++ + L+
Sbjct: 66 TNSRHIHIEAEGMGNDDGTLLYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNS 125
Query: 120 LNSMVMHVVRG 130
++ +RG
Sbjct: 126 KFKGLVAALRG 136
>gi|254246962|ref|ZP_04940283.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
PC184]
gi|124871738|gb|EAY63454.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
PC184]
Length = 172
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 19 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQTSGGLAPSNAAQ 77
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + A + GNTV +
Sbjct: 78 LPMAQPAGVTSGMSMVSTAPGHMAGTAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 137
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 138 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 169
>gi|20807892|ref|NP_623063.1| flagellar basal body protein [Thermoanaerobacter tengcongensis MB4]
gi|20516457|gb|AAM24667.1| Flagellar basal body protein [Thermoanaerobacter tengcongensis MB4]
Length = 131
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETHL 62
+ ++ + R +++ NIAN TPN++ ++ FE IL + + TH H+
Sbjct: 6 DLLAKGLYAATVRSNVIANNIANVDTPNFKRSEVK-FEEILQEALNGNKLKGYITHPRHI 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + TT +++ GN V I E+ + + Y + + +
Sbjct: 65 PIGPPPIDSIKPEIYQV---NTTSMRLDGNNVDIDYEMSQLAKNQLYYYALVQRVSGELN 121
Query: 123 MVMHVVR 129
+M V+
Sbjct: 122 SIMTAVK 128
>gi|330961193|gb|EGH61453.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 135
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L +T H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDLE-FSSVL--AAETDKTQNGHFALNK 65
Query: 67 SSGLHWNAHVI-----EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNNDGTLMYRTPSQPSLDQNTVDSQVETASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|311030133|ref|ZP_07708223.1| flagellar basal body rod protein FlgB [Bacillus sp. m3-13]
Length = 129
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISS-FETILNQNFLMARTHETHLKESD 66
Q + + + K +S NIAN TPN++ K+I F + +T + H + S
Sbjct: 9 QALEKGIQYSGAKHKAISHNIANVDTPNFKRKEIKPNFGETYQRALEANKTDDRHREFSG 68
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK-YLYELNTKLIKKLNSMVM 125
SS + + + +GN V I E+ + Y Y L ++ K S +
Sbjct: 69 SSNKAFKMD------NTSYSYSHNGNNVDIDKEMSDLAENQIYYYTLIDQMSGKFQS-LQ 121
Query: 126 HVVRG 130
+V++G
Sbjct: 122 NVIKG 126
>gi|90021858|ref|YP_527685.1| GTP-binding protein LepA [Saccharophagus degradans 2-40]
gi|89951458|gb|ABD81473.1| flagellar basal-body rod protein FlgB [Saccharophagus degradans
2-40]
Length = 134
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 13/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-------RTHE 59
I + SER +++ N+AN +TP Y+A+DI F+ L + TH
Sbjct: 9 LGIYESALSLRSERAGVLANNLANVNTPGYKARDI-DFQQALKDSMGQGIGGKAAKTTHA 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ++++ E + V GNTV E + ++ ++
Sbjct: 68 AHFGAAENNRFSG-----EPLYRSPSQPSVDGNTVEEQKEHAEYMKNTLEFQAAFTVLNS 122
Query: 120 LNSMVMHVVRG 130
+ +RG
Sbjct: 123 KFKGLTKAIRG 133
>gi|119503641|ref|ZP_01625724.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2080]
gi|119460703|gb|EAW41795.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium
HTCC2080]
Length = 133
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I+ Q S+R ++S NIANA TPNY+A+DI + + T +
Sbjct: 6 NALGISPQVLALRSQRMNLLSANIANAETPNYKARDIDFRAAMTQASNSQESTQLRATQA 65
Query: 65 SDSSGLHWNAHV-IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+G V + Q + +Q +GNTV E + Y+ + L+
Sbjct: 66 KHMTGFESQLGVESDIKYRQPSSLQENGNTVETHREHAEFMENALKYQASLNLLDSRIKG 125
Query: 124 VMHVVRG 130
+ ++G
Sbjct: 126 LRAAIKG 132
>gi|255608368|ref|XP_002538891.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis]
gi|223509946|gb|EEF23492.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis]
Length = 156
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 18/138 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------- 53
++RQ++++ NIANA TP Y+A+DI F++ +
Sbjct: 20 LNFHQAALRVRNQRQELLASNIANADTPQYKARDI-DFQSAMQSALQQSAGVGPATQPAS 78
Query: 54 -MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
M +T+ H+ + + + V+ L Q V GNTV + E YE
Sbjct: 79 EMQQTNNAHMNGNAGNDYPGSGDVLFRSLRQ---GSVDGNTVDMDVERNAYVDNGIRYEA 135
Query: 113 NTKLIKKLNSMVMHVVRG 130
+ ++ VM + G
Sbjct: 136 SLTMMTDKIKEVMAAING 153
>gi|149184204|ref|ZP_01862522.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
gi|148831524|gb|EDL49957.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
Length = 115
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I S+R ++ NIANA+TP Y+A+DI F L+ L+
Sbjct: 4 GLFGIHGAALEIRSQRLGVLGSNIANAATPGYKARDI-DFAAALD----------ARLEG 52
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+++SG A P T + GNTV + E Y ++ V
Sbjct: 53 AEASGATTGAIKYRVP----TMASLDGNTVEMATEQAAFAENAVAYSATLNFLRGRVETV 108
Query: 125 MHVVRG 130
+RG
Sbjct: 109 TRAIRG 114
>gi|90579905|ref|ZP_01235713.1| flagellar basal body protein [Vibrio angustum S14]
gi|90438790|gb|EAS63973.1| flagellar basal body protein [Vibrio angustum S14]
Length = 131
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +R + ++ NI+NA+TP Y+AKD+ F L A T + S
Sbjct: 9 LGVHQYTVGVREKRAETLASNISNANTPGYKAKDL-DFSRALK-----AATSGADIGLSR 62
Query: 67 SSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++G H NA P TG GNTV E Y+ + +
Sbjct: 63 TNGRHINASTQVSGEQKYRVPTQPDTG---DGNTVDAQLEQNLFMQNSIEYQASLDFLGS 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLSKALKG 130
>gi|262276420|ref|ZP_06054229.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
gi|262220228|gb|EEY71544.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
Length = 131
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETH 61
+ ++R + ++ N+ANA+TP Y+A+D+ FE L NF ++RT+E H
Sbjct: 9 LGVHQHTVGVRAQRAETLASNLANANTPGYKAQDV-DFEQALQAATSGANFGLSRTNERH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +S + P TG GNTV E Y+ + +
Sbjct: 68 I---PASSQITGQKMYRIPNQPDTG---DGNTVDAQVERNLFMQNALEYQASLDFLGSKF 121
Query: 122 SMVMHVVRG 130
+ ++G
Sbjct: 122 KNMSKALKG 130
>gi|225159034|ref|ZP_03725344.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium TAV2]
gi|224802413|gb|EEG20675.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium TAV2]
Length = 144
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI-SSFETILNQNFLMARTHETH-LKE 64
+Q+A + + RQ+ ++ NIANA TP +R D+ S F L F A + ++
Sbjct: 21 YQLARKLLDAAVLRQEAIASNIANAETPGFRRLDVSSDFAATLRARFNEAAASGSERVQM 80
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
SD + V+ GN+V + EL Y+ T+++ + +
Sbjct: 81 SDLTPRLMEDASART-------VRPDGNSVELETELLAMNRNSVEYDFLTEVVSRHIKQL 133
Query: 125 MHVVRG 130
+ G
Sbjct: 134 RLAITG 139
>gi|83589620|ref|YP_429629.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
39073]
gi|83572534|gb|ABC19086.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
39073]
Length = 132
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHL 62
+ + + + RQ+ ++ NIAN +TP ++ + SFE L++ + RT+ HL
Sbjct: 9 VLEKALDTATLRQRTIAHNIANVNTPGFKRYQV-SFEDQLSRALGLEPGLPLYRTNPYHL 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
SGL V D +T ++ GN V I E+ + + + + +
Sbjct: 68 PP---SGLELAPQVSR---DTSTTMRQDGNNVDIDREMVDLAQNSLNFNVAVQQLNTRLA 121
Query: 123 MVMHVV 128
M+ +V+
Sbjct: 122 MLRYVI 127
>gi|119469947|ref|ZP_01612752.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Alteromonadales bacterium TW-7]
gi|119446657|gb|EAW27930.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Alteromonadales bacterium TW-7]
Length = 135
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 13/129 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-------NQNFLMARTHE 59
+ S+R ++++ NIANA TP Y+AKDI +F + L M T+E
Sbjct: 9 LGVHQHTMLIRSQRAEVLASNIANADTPGYKAKDI-NFASALKAAKSHQQSGNTMVTTNE 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + P TG GN+V + E Y+ + + +
Sbjct: 68 KHIGGGTRS--VGGDELFRTPNQTDTG---DGNSVDVQVERNLYTQNAMEYQASLQFLSG 122
Query: 120 LNSMVMHVV 128
+ +
Sbjct: 123 KFKGLNKAL 131
>gi|26991080|ref|NP_746505.1| flagellar basal body rod protein FlgB [Pseudomonas putida KT2440]
gi|24986115|gb|AAN69969.1|AE016635_5 flagellar basal-body rod protein FlgB [Pseudomonas putida KT2440]
Length = 136
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + ++R ++++ NIANA TPNY+A+D+ F ++L ++
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDM-DFASVLAAESDKQQS-GGRFNLDR 66
Query: 67 SSGLHWNAHVIEAPLD-----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 67 TNSRHIEAEGLAMADETLKYRTPLQPSIDQNTVDAQIEQSNYTENAIGFQASFTLLNSKF 126
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 127 KGLVSALRG 135
>gi|49077262|gb|AAT49657.1| PA1077 [synthetic construct]
Length = 136
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-----RTHETH 61
I Q ++ ++R ++++ N+ANA TPNY+A+D+ F +L + A T T+
Sbjct: 9 LGIHQQALSFRAQRAEVLANNLANADTPNYKARDL-DFAAVLAEQKDKAAKGTFATRTTN 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + G ++ + NTV E ++ + +
Sbjct: 68 ERHIAAEGFGMGEGSLQ--YRIPVQPSIDQNTVDAQIEQANYAENAMHFQASFTFLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVSALRG 134
>gi|332305612|ref|YP_004433463.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172941|gb|AEE22195.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 133
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 12/130 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHET 60
+ +ER ++++ N+ANA+TP Y+A+DI +F+ + ++ + RTHE
Sbjct: 8 LMGFTHKAVQVRTERMEVLAGNLANANTPGYKARDI-NFQDAMRSAQSGRSQNLTRTHEN 66
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+K + + P GN V + E Y+ + + +
Sbjct: 67 HIKGNMQGSGEMQFRISNQPD------TGDGNNVDVQVERNAFLDNGLRYQASVEFLNGK 120
Query: 121 NSMVMHVVRG 130
+ + G
Sbjct: 121 IKGMKKAISG 130
>gi|257484952|ref|ZP_05638993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|298487860|ref|ZP_07005900.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157585|gb|EFH98665.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|331011039|gb|EGH91095.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 135
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDL-DFSSVL--AAENDKVQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLLYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|87119679|ref|ZP_01075576.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121]
gi|86165155|gb|EAQ66423.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121]
Length = 133
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHL 62
F + + S+R +++ NIANA TPNY+A+DI SF + +++ M T+ H
Sbjct: 9 FAGHDKFLKFRSDRSAVLANNIANADTPNYKARDI-SFSSAMSKAQNDALKMRSTNTKHF 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + S + + + GNTV + E + ++ + + + S
Sbjct: 68 ERATKSIKEEESLFYRVA----SQPSLDGNTVDLQREQAEFAQNSLKFDTSFMFLDRKIS 123
Query: 123 MVMHVVRG 130
+ + G
Sbjct: 124 SMKKALNG 131
>gi|121533766|ref|ZP_01665593.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
Nor1]
gi|121307757|gb|EAX48672.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
Nor1]
Length = 164
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDI---SSFETILNQNFLMARTHETHLKE 64
++ + + R K++S NIAN +TP ++ ++ + LN ++RTH+ H+
Sbjct: 42 KVLEKALAAAALRHKVISNNIANVNTPGFKRSEVHFEEQLKQALNAKSGLSRTHQRHIAA 101
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ +E T + GN V I E+ + Y+ + + + S +
Sbjct: 102 KG------DDFSVEVITVNNTAYRADGNNVDIDFEMAEMAKNNIYYDAVAQQLNRYFSNL 155
Query: 125 MHVV 128
V+
Sbjct: 156 KSVI 159
>gi|167034947|ref|YP_001670178.1| flagellar basal body rod protein FlgB [Pseudomonas putida GB-1]
gi|166861435|gb|ABY99842.1| flagellar basal-body rod protein FlgB [Pseudomonas putida GB-1]
Length = 136
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + ++R ++++ NIANA TPNY+A+D+ F ++L ++
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDM-DFASVLAAESDKQQS-GGRFSLDR 66
Query: 67 SSGLHWNAHVIEAPLD-----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 67 TNSRHIEADGLAMADETLKYRTPLQPSIDQNTVDAQIEQSNYTENAIGFQASFTLLNSKF 126
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 127 KGLVSALRG 135
>gi|70731826|ref|YP_261568.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
Pf-5]
gi|68346125|gb|AAY93731.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
Pf-5]
Length = 155
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q + ++R ++++ NIANA TPNY+A+D+ F +L + + +
Sbjct: 29 LGIHEQALGFRAKRAEVLANNIANADTPNYKARDL-DFSAVLAE--QNQKAQNGTFALNM 85
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + + NTV E ++ + L+
Sbjct: 86 TNNRHIEAQGLSSGDESLLYRTPMQPSIDQNTVDAQLEQSSYAQNSVDFQASFTLLNSKF 145
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 146 KGLVAALRG 154
>gi|134300250|ref|YP_001113746.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
MI-1]
gi|134052950|gb|ABO50921.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
MI-1]
Length = 132
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHE 59
I Q + + RQ++++ NIAN +TP ++ K SFE L N + TH
Sbjct: 7 PTLMILQQGLDAGAARQRVIANNIANFNTPGFK-KSYVSFEDQLKAALGNSGVSLKGTHP 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIK 118
H+ +S + + + T ++ GN V + E+ Y+ L ++
Sbjct: 66 LHIG---TSNREIKPEIKQV---EETTMRYDGNNVDVDEEMVNLAAATIEYDVLAQGVMD 119
Query: 119 KLN 121
+ +
Sbjct: 120 RFH 122
>gi|32266906|ref|NP_860938.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
51449]
gi|32262958|gb|AAP78004.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
51449]
Length = 144
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 19/135 (14%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------------F 52
+ I + ++ S RQ +++ N+AN TP YR KD+ +FE L++
Sbjct: 9 VYPIVHKALDYRSIRQDMIASNLANVDTPFYRPKDV-NFEQYLSRENKKIFGTAPRSYKL 67
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+A+T HL + + GN+V + E + G +Y+
Sbjct: 68 ELAKTSSKHLDT-----RRIDKDTATMFWRDGHLAKNDGNSVDLDVETSEMGKNSTMYQA 122
Query: 113 NTKLIKKLNSMVMHV 127
T +K+ + +
Sbjct: 123 LTSALKRHKGIFAYA 137
>gi|289679032|ref|ZP_06499922.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
syringae FF5]
gi|302185586|ref|ZP_07262259.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
syringae 642]
gi|330899398|gb|EGH30817.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330943204|gb|EGH45611.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330975973|gb|EGH76039.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 135
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDLE-FSSVL--AAETDKAQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|119477956|ref|ZP_01618056.1| Flagellar basal body protein [marine gamma proteobacterium
HTCC2143]
gi|119448869|gb|EAW30111.1| Flagellar basal body protein [marine gamma proteobacterium
HTCC2143]
Length = 134
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-------MART 57
I + + + R ++++ N+ NA TPN++A+DI F++ LN M T
Sbjct: 7 NALGIHEKALHVRTMRAEVLANNLVNADTPNFKARDI-DFKSALNSEMSSQSASRGMVAT 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ H+ + S + E + GNTV E+ + ++ + +L+
Sbjct: 66 NSRHIGGASQS------YQPELLYRTPLQPSLDGNTVEEQVEMSRFSKNMMDFQASFQLL 119
Query: 118 KKLNSMVMHVVRG 130
+ + ++G
Sbjct: 120 NGKFKGLSNAIKG 132
>gi|90408057|ref|ZP_01216228.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3]
gi|90310814|gb|EAS38928.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3]
Length = 133
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 8/128 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHL 62
+ S R +I++ N+ NA TP+Y+A+D++ E +L+ ++RT+E H
Sbjct: 9 LGMHQYTLGVRSRRAEILASNLTNADTPDYKARDLNFKEALLSARSGSGISLSRTNEIHR 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S N + T GN V E Y+ + + S
Sbjct: 69 TGHSFSMQQSNQYYRTGNQPDTG----DGNNVDAEVERNLFMKNSLQYQASLDFLNSKIS 124
Query: 123 MVMHVVRG 130
+ ++G
Sbjct: 125 GLRKAIKG 132
>gi|15596274|ref|NP_249768.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa PAO1]
gi|107100522|ref|ZP_01364440.1| hypothetical protein PaerPA_01001547 [Pseudomonas aeruginosa PACS2]
gi|116049006|ref|YP_792192.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218892959|ref|YP_002441828.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
LESB58]
gi|254234213|ref|ZP_04927536.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
C3719]
gi|254239435|ref|ZP_04932757.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa 2192]
gi|296390559|ref|ZP_06880034.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa PAb1]
gi|313106032|ref|ZP_07792291.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
39016]
gi|9946993|gb|AAG04466.1|AE004539_8 flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa PAO1]
gi|115584227|gb|ABJ10242.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166144|gb|EAZ51655.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
C3719]
gi|126192813|gb|EAZ56876.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa 2192]
gi|218773187|emb|CAW28999.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
LESB58]
gi|310878793|gb|EFQ37387.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
39016]
Length = 135
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-----RTHETH 61
I Q ++ ++R ++++ N+ANA TPNY+A+D+ F +L + A T T+
Sbjct: 9 LGIHQQALSFRAQRAEVLANNLANADTPNYKARDL-DFAAVLAEQKDKAAKGTFATRTTN 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + G ++ + NTV E ++ + +
Sbjct: 68 ERHIAAEGFGMGEGSLQ--YRIPVQPSIDQNTVDAQIEQANYAENAMHFQASFTFLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVSALRG 134
>gi|172061975|ref|YP_001809627.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria
MC40-6]
gi|171994492|gb|ACB65411.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
MC40-6]
Length = 162
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 30/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQTHGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + + + GNTV +
Sbjct: 68 LPMAQPAGVASGMTMVSTAPGHMAGTAKLIPTGGPADDYGRSQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAI 158
>gi|114798179|ref|YP_759000.1| flagellar basal body rod protein FlgB [Hyphomonas neptunium ATCC
15444]
gi|114738353|gb|ABI76478.1| putative flagellar protein [Hyphomonas neptunium ATCC 15444]
Length = 123
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 14/125 (11%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ FQ+ A +E QK+ + N+ANA P ++A +I SFE L++
Sbjct: 9 LQLFQVYGAMARHAAESQKVSATNVANADAPGFKAGEIESFEAFLSRTMQAG-------- 60
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
D + AP D +GN V + E++ S + + + K +
Sbjct: 61 GVDDMMSGFKVGTSGAPAD------PNGNNVSLEREVFNSAEAMGQHNMALTVYSKSIDL 114
Query: 124 VMHVV 128
+ +
Sbjct: 115 LRTAL 119
>gi|237751238|ref|ZP_04581718.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
gi|229372604|gb|EEO22995.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
Length = 132
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---RTHETHLKESD 66
++ S RQ +++ N+AN TP YR +D+ FE +L + ++ LK +
Sbjct: 1 MYSALDYRSLRQDLIASNMANVDTPFYRPRDVH-FEDMLAEKASQIFDNKSRAETLKLTQ 59
Query: 67 SSGLHWNAHVIEA-----PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ H + + + + GN+V + E + G +Y+ T +KK
Sbjct: 60 ALPQHLPSGLADPLTGSLFFRDGHLARNDGNSVDLDVETSEMGKNSVMYQALTSALKKHK 119
Query: 122 SMVMHVV 128
+ + +
Sbjct: 120 GIFAYAL 126
>gi|323703166|ref|ZP_08114819.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans
DSM 574]
gi|323531825|gb|EGB21711.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans
DSM 574]
Length = 132
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--HETHL 62
F + + + + RQ++++ N+AN +TP ++ K SFE L TH
Sbjct: 7 PMFNLLQRGLDASALRQRVIANNVANLNTPGFK-KSYVSFEEQLKAAMESGGGPLKGTHP 65
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLN 121
S + V + + T ++ GN V I E+ Y+ ++ LI + N
Sbjct: 66 LHIGVSNMDVKPEVKQV---KDTTMRYDGNNVDIDEEMVNLAATTIEYDVISQGLIDRFN 122
Query: 122 SMVMHVVRG 130
++ V+ G
Sbjct: 123 -VLSMVIGG 130
>gi|194014328|ref|ZP_03052945.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC 7061]
gi|194013354|gb|EDW22919.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC 7061]
Length = 131
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ +QK++S NIAN TPNY++K+++ F +LN + +T+ D S
Sbjct: 13 LENALGRANVKQKVISNNIANIDTPNYKSKNVA-FHDMLNDASIKLDAKKTYQGHIDFSK 71
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N V+ + T Q +GN V I E+ + + Y + + + + V+
Sbjct: 72 TGSNYSVVSS---NRTSYQENGNNVDIDQEMSELAKNQIQYNALVERMSGKFNSLKTVLT 128
Query: 130 G 130
G
Sbjct: 129 G 129
>gi|134297201|ref|YP_001120936.1| flagellar basal body rod protein FlgB [Burkholderia vietnamiensis
G4]
gi|134140358|gb|ABO56101.1| flagellar basal-body rod protein FlgB [Burkholderia vietnamiensis
G4]
Length = 162
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASALARSLKQTDGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + A + GNTV +
Sbjct: 68 LPMAQPAGVTSGMTMVSTAPGHMAGAAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYESGMTVMTQQIKTMIAAIT 159
>gi|114777414|ref|ZP_01452411.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
PV-1]
gi|114552196|gb|EAU54698.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
PV-1]
Length = 133
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQN---FLMARTHETH 61
FQ + Q +++ NIANA TPN+ A + S F + L T+ H
Sbjct: 8 FQKLESALIAREKVQGVLASNIANADTPNFHADKRSFSDFLSELQTGKSIGAATTTNPMH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +++ GL + L Q + GN V + ++ + +YEL +LIK
Sbjct: 68 ISDTNEPGLSGSI------LGQQPSASMDGNNVDMQQQMASMSENQLMYELTMRLIKGDL 121
Query: 122 SMVMHVVR 129
S + + ++
Sbjct: 122 SSLANTIK 129
>gi|152985328|ref|YP_001349653.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa PA7]
gi|150960486|gb|ABR82511.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa PA7]
Length = 135
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-----RTHETH 61
I Q ++ ++R ++++ N+ANA TPNY+A+D+ F +L + A T T+
Sbjct: 9 LGIHPQALSFRAQRAEVLANNLANADTPNYKARDL-DFGAVLAEQKDKAAKGTFATRTTN 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + G ++ + NTV E ++ + +
Sbjct: 68 ERHIAAEGFGMGEGSLQ--YRIPVQPSIDQNTVDAQIEQANYAENAMHFQASFTFLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVSALRG 134
>gi|115353121|ref|YP_774960.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria AMMD]
gi|115283109|gb|ABI88626.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria AMMD]
Length = 162
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 30/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQAHGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + + + GNTV +
Sbjct: 68 LPMAQPAGVASGMTMVSTAPGHMAGTAKLIPTGGPADDYGRSQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAI 158
>gi|89075491|ref|ZP_01161902.1| flagellar basal body protein [Photobacterium sp. SKA34]
gi|89048763|gb|EAR54334.1| flagellar basal body protein [Photobacterium sp. SKA34]
Length = 131
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +R + ++ NI+NA+TP Y+AKD+ F L A T + S
Sbjct: 9 LGVHQYTVGVREKRAETLASNISNANTPGYKAKDL-DFSRALK-----AATSGADIGLSR 62
Query: 67 SSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++G H NA P TG GNTV E Y+ + +
Sbjct: 63 TNGRHINASTQVSGEQKYRVPTQPDTG---DGNTVDGQLEQNLFMQNSIEYQASLDFLGS 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLSKALKG 130
>gi|258592508|emb|CBE68817.1| putative Flagellar basal-body rod protein flgB [NC10 bacterium
'Dutch sediment']
Length = 120
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ S R ++++ NIAN TP YR ++ F L ++ + +
Sbjct: 10 DLLTEMVRAASLRHQVLARNIANIDTPGYRPMEV-DFSEELRLASEAGEPPAMVVRTAVA 68
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ A + GN V + ++ K + +++ +++ V
Sbjct: 69 ADRSVGAG------------RYDGNAVDLDRQMAKMAENALWHNTMIQILNSRMNLLRTV 116
Query: 128 VRG 130
+RG
Sbjct: 117 IRG 119
>gi|160896082|ref|YP_001561664.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
gi|160361666|gb|ABX33279.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
Length = 160
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-------MARTHE 59
S+ +ERQ+ ++ NIANA TP Y A+D +F L + +
Sbjct: 32 LDFQSKALVLRAERQRAIASNIANADTPGYVARDF-NFREALTAVTSGPSPMTLASVSQG 90
Query: 60 THLK-ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ + +SG +H+ + QT + NTV + E YE + +
Sbjct: 91 GHIPLPAAASGQSAQSHLGYSVQAQT---NMDNNTVDLDRERANFVDNAVRYEATLRFLN 147
Query: 119 KLNSMVMHVVRG 130
++ ++G
Sbjct: 148 GQAKTMLSAIQG 159
>gi|170703093|ref|ZP_02893913.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
IOP40-10]
gi|171321835|ref|ZP_02910736.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
MEX-5]
gi|170131990|gb|EDT00498.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
IOP40-10]
gi|171092873|gb|EDT38125.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
MEX-5]
Length = 162
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 30/151 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQTHGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + + + GNTV +
Sbjct: 68 LPMAQPAGVASGMTMVSTAPGHMAGAAKLIPTGGPADDYGRSQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAI 158
>gi|255592868|ref|XP_002535736.1| conserved hypothetical protein [Ricinus communis]
gi|223522123|gb|EEF26647.1| conserved hypothetical protein [Ricinus communis]
Length = 274
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 25/131 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
QP + + RQ++++ NIANA TP Y+A DI
Sbjct: 163 FQPARRASFNERALGLRAYRQELLASNIANADTPGYKAVDI------------------- 203
Query: 61 HLKESDSSGLHWNAHVIEAPL--DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ E+ +G + +APL V GNTV + E + +YE ++
Sbjct: 204 DINEALRTGKSKD----DAPLLYRMPAQGSVDGNTVDMDVERAEFSQNAVMYEYTVDRVR 259
Query: 119 KLNSMVMHVVR 129
M+ +++
Sbjct: 260 GYYKMMDDLLK 270
>gi|209521586|ref|ZP_03270284.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
gi|209497969|gb|EDZ98126.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
Length = 165
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 33/155 (21%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+DI F + L
Sbjct: 9 FAFGRQAMDVRAYRQELLSSNIANADTPGYKARDI-DFASSLAGALKKTGGSTAGQGTSN 67
Query: 51 --------------NFLMARTHETHLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
M+ T H+ + ++ + GNTV
Sbjct: 68 SSTLAMTQPAGVTSGMSMSTTEAGHMSGKATLTATGGSPDDYGNLQYRIPQQPALDGNTV 127
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ E + +E ++ ++ +
Sbjct: 128 DVDTERVQFADNTVHFESGMTVVSSQIKTMLSAIT 162
>gi|157692297|ref|YP_001486759.1| flagellar basal body rod protein FlgB [Bacillus pumilus SAFR-032]
gi|157681055|gb|ABV62199.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
Length = 129
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ +QK++S NIAN TPNY++K+++ F +LN + +T+ D S
Sbjct: 11 LENALGRANVKQKVISNNIANIDTPNYKSKNVA-FHDMLNDASIKLDAKKTYQGHIDFSK 69
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N V+ + T Q +GN V I E+ + + Y + + + + V+
Sbjct: 70 TGSNYSVVSS---NRTSYQENGNNVDIDQEMSELAKNQIQYNALVERMSGKFNSLKTVLT 126
Query: 130 G 130
G
Sbjct: 127 G 127
>gi|315127356|ref|YP_004069359.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas sp. SM9913]
gi|315015870|gb|ADT69208.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas sp. SM9913]
Length = 136
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMARTHE 59
+ S+R ++++ NIANA TP Y+AKDI F + L M RT+E
Sbjct: 9 LGVHPHAMLIRSQRAEMLATNIANADTPGYKAKDI-DFASALKTAKSNQLSGNTMVRTNE 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + + P TG GN+V I E Y+ + + +
Sbjct: 68 KHIAGGTRS--VGSNELFRTPNQTDTG---DGNSVDIQVERNLYTQNAMEYQASVQFLNG 122
Query: 120 LNSMVMHVV 128
+ +
Sbjct: 123 KFKGLKKAL 131
>gi|330875980|gb|EGH10129.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967087|gb|EGH67347.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 135
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDLE-FSSVL--AAENDKAQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|220929471|ref|YP_002506380.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
H10]
gi|219999799|gb|ACL76400.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
H10]
Length = 137
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETHL 62
+ + + R +++S+N+AN TPNY+ KD++ FE LN + T E H+
Sbjct: 10 NLLEKSISASWTRNEVISQNLANIDTPNYKRKDVT-FEQYLNDSLDSRKLEGITTDERHI 68
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + + T +++ GN V + +E+ Y ++I S
Sbjct: 69 PIKSKNIEKVKPEITLD--NSDTSMRIDGNNVDVDSEMAYLAKNTIQYNTLIQMINSNFS 126
Query: 123 MVMHVV 128
+ V+
Sbjct: 127 RIKSVI 132
>gi|66046710|ref|YP_236551.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
syringae B728a]
gi|63257417|gb|AAY38513.1| Flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
syringae B728a]
gi|320329349|gb|EFW85342.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330880519|gb|EGH14668.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330889088|gb|EGH21749.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
mori str. 301020]
gi|330953718|gb|EGH53978.1| flagellar basal body rod protein FlgB [Pseudomonas syringae Cit 7]
gi|330972410|gb|EGH72476.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330986465|gb|EGH84568.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 135
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDL-DFSSVL--AAENDKVQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|91225870|ref|ZP_01260839.1| flagellar basal-body rod protein B [Vibrio alginolyticus 12G01]
gi|262394942|ref|YP_003286796.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|269965427|ref|ZP_06179546.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
gi|91189520|gb|EAS75796.1| flagellar basal-body rod protein B [Vibrio alginolyticus 12G01]
gi|262338536|gb|ACY52331.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|269829906|gb|EEZ84136.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
Length = 131
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y+A+ + F L A T +
Sbjct: 7 NALGIHQHTVGVRERNAEVISTNIAQANTPGYKARGL-DFAKELQ-----AATSGASIGL 60
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S + G H A P TG GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIPATTTLVGDKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFL 117
Query: 118 KKLNSMVMHVVRG 130
+ ++G
Sbjct: 118 GSKFKNLTKAIKG 130
>gi|219670132|ref|YP_002460567.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense
DCB-2]
gi|219540392|gb|ACL22131.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense
DCB-2]
Length = 133
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-------T 57
I + + S R K+++ N+AN TP+++ D+ F+ +L + T
Sbjct: 8 PVINILEKSLDASSLRYKVLANNVANVDTPDFKRSDV-DFDLLLGEAMGQTGGELPLKVT 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
E HL+++ + DQ T + GN V I E+ Y T+ I
Sbjct: 67 SERHLQKTGFNSSG-------VVQDQGTTYRNDGNNVDIDKEMVNVAENGIYYNSVTRAI 119
Query: 118 KKLNSMVMHVVR 129
S + V+
Sbjct: 120 SAQLSHLRTVIT 131
>gi|325529010|gb|EGD06023.1| flagellar basal body rod protein FlgB [Burkholderia sp. TJI49]
Length = 162
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASALARSLKQANGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
MA T H+ + A + GNTV +
Sbjct: 68 LPMTQPAGVTSGMTMASTAAGHMTGTAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 159
>gi|313895777|ref|ZP_07829331.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
137 str. F0430]
gi|320529388|ref|ZP_08030476.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
gi|312975202|gb|EFR40663.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
137 str. F0430]
gi|320138354|gb|EFW30248.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
Length = 140
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 14/132 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------R 56
+ I S+ S R +++S NIAN +TPN+R + FE +L + +A R
Sbjct: 9 STLDIGSRALAAASLRHEVLSNNIANVNTPNFRRSHVR-FEDLLQKELGLAEDPLMKVVR 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
TH+ H + H D TT +++ GN V I E+ + + Y
Sbjct: 68 THDRHFPLAFRGKAHGVIE-----QDSTTNMRLDGNNVDIDIEMAEVAKNQLYYSALANR 122
Query: 117 IKKLNSMVMHVV 128
+ S + ++
Sbjct: 123 MGGYVSKIKSII 134
>gi|170734377|ref|YP_001766324.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
MC0-3]
gi|169817619|gb|ACA92202.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
MC0-3]
Length = 162
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANADTPGYQARDV-DFASTLARSLKQTSGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + A + GNTV +
Sbjct: 68 LPMTQPAGVTSGMSMVSTAAGHMTGTAKLIPTGGPADDYGRAQYRMPLQPSLDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + YE ++ + ++ +
Sbjct: 128 VERVQFANNALHYETGMTVMTQQIKAMIAAIT 159
>gi|71736840|ref|YP_275566.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557393|gb|AAZ36604.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 135
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDL-DFSSVL--AAQNDKVQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|28869137|ref|NP_791756.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213967585|ref|ZP_03395733.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato T1]
gi|237799203|ref|ZP_04587664.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806222|ref|ZP_04592926.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|301385710|ref|ZP_07234128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tomato Max13]
gi|302060078|ref|ZP_07251619.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tomato K40]
gi|302134837|ref|ZP_07260827.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28852377|gb|AAO55451.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927886|gb|EEB61433.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
tomato T1]
gi|331017029|gb|EGH97085.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
gi|331022058|gb|EGI02115.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027335|gb|EGI07390.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 135
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + H +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDLE-FSSVL--AAENDKAQNGHFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVETASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|304438469|ref|ZP_07398409.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304368552|gb|EFM22237.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 139
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------AR 56
++S+ + R +++S NIAN +TPN++ + FE +L + + R
Sbjct: 9 PVIDVSSRAMAASTLRHEVLSNNIANVNTPNFKRSHVR-FEDLLKKELGLEDDPLMPVVR 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
TH+ HL + H + TT +++ GN V I E+ + + Y +
Sbjct: 68 THDRHLPLAYRGKAHGVIE-----QENTTNMRLDGNNVDIDVEMAEVAKNQLYYNVLANQ 122
Query: 117 IKKLNSMVMHVVR 129
+ S + V+
Sbjct: 123 LGGHISRMKSVIT 135
>gi|304310784|ref|YP_003810382.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium HdN1]
gi|301796517|emb|CBL44725.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium HdN1]
Length = 135
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 13/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-------NQNFLMARTHE 59
+ Q R +I+S N+AN TP +RA+D+ F+ +L + T
Sbjct: 9 LGVFPQAMELRGRRAEILSNNLANGDTPGFRARDV-DFKDVLGGMLGDPSATPSPVTTQS 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H++ GL + V GNTV + E + ++ +
Sbjct: 68 GHVQ-----GLLVPDSIDGLKYRLAAQPSVDGNTVDMQKERTEFVRNTQEFQAALTFLNG 122
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 123 KIKSLNMALKG 133
>gi|147678427|ref|YP_001212642.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
gi|146274524|dbj|BAF60273.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
Length = 133
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHETHL 62
Q + + + R ++++ NIANA+TP ++ K FE++ + MA TH H+
Sbjct: 8 QALKKGLDAAALRHRVIANNIANANTPGFK-KSAVEFESLFKEALGRNPVGMAVTHPRHM 66
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
++ I + T ++ GN V I E+ Y+ + + + +
Sbjct: 67 GKAPLLSELQPVEKI----NNATSMRTDGNNVDIDEEMVNLAANDIHYQAMARELSERYA 122
Query: 123 MVMHVVRG 130
++ +V+ G
Sbjct: 123 LLSYVITG 130
>gi|39995515|ref|NP_951466.1| flagellar basal-body rod protein FlgB [Geobacter sulfurreducens
PCA]
gi|39982278|gb|AAR33739.1| flagellar basal-body rod protein FlgB [Geobacter sulfurreducens
PCA]
gi|298504515|gb|ADI83238.1| flagellar basal body rod protein FlgB [Geobacter sulfurreducens
KN400]
Length = 139
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
T + ++ + + ++S N+ANA TPNY K + SFE L N+ A TH
Sbjct: 9 TTINVLAKAVDLRARNHTMISANLANAETPNYTPKAL-SFEKELGAALKGNKTGSPATTH 67
Query: 59 ETH--LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
H LK +S VIE P N V + E+ + + +Y + ++
Sbjct: 68 PRHIPLKGQAASVQSVEGTVIETPAPTPGR---DNNGVELEAEMSRMAENQIMYNASIQI 124
Query: 117 IKKLNSMVMHVVRG 130
+ K + + ++G
Sbjct: 125 LTKKFEGMKYAIKG 138
>gi|85712251|ref|ZP_01043302.1| Flagellar basal body protein [Idiomarina baltica OS145]
gi|85693878|gb|EAQ31825.1| Flagellar basal body protein [Idiomarina baltica OS145]
Length = 134
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHE 59
I ++R ++++ NIANA TP Y+AK + F+ L Q +ARTHE
Sbjct: 8 LLGIQQYTLGIRTQRAELIANNIANADTPGYKAKGL-DFQQALAQAQRGIQSHSLARTHE 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H S P TG GNTV + E YE+ +
Sbjct: 67 KHFSVEISPQ---GQEKFRVPSQPDTG---DGNTVDVQVEQNLYAKNALEYEMTMNFLNG 120
Query: 120 LNSMVMHVV 128
S V +
Sbjct: 121 KISGVKKAL 129
>gi|297617135|ref|YP_003702294.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus
DSM 12680]
gi|297144972|gb|ADI01729.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus
DSM 12680]
Length = 138
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHET 60
+ + + RQK+++ N+AN TP Y+A +++ FE L + + TH
Sbjct: 12 NVLEKALDGAMLRQKVIANNLANVDTPGYKAMEVT-FEEQLKNSMKEAGSEYNLKTTHPR 70
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL+ + S +V E + GN+V I E+ + Y + + +
Sbjct: 71 HLQIPNISSFQVGINVAEG-----YTFRNDGNSVDIDREMARLSKNVVYYNAVSTSMSEE 125
Query: 121 NSMVMHVVR 129
++ +
Sbjct: 126 FKLLRMAIT 134
>gi|109899405|ref|YP_662660.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas atlantica
T6c]
gi|109701686|gb|ABG41606.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas atlantica
T6c]
Length = 133
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHET 60
+ +ER ++++ N+ANA+TP Y+A+DI +F+ + +N + RTHE
Sbjct: 8 LMGFTHKAVQVRTERMEVLAGNLANANTPGYKARDI-NFQDAMRSAQNSRNQNLTRTHEN 66
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+K + P GN V + E Y+ + + +
Sbjct: 67 HIKGHMQGSGEVQFRINNQPD------TGDGNNVDVQVERNAFLDNGLRYQASVEFLNGK 120
Query: 121 NSMVMHVVRG 130
+ + G
Sbjct: 121 IKGMKKAIGG 130
>gi|262273532|ref|ZP_06051346.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
gi|262222510|gb|EEY73821.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
101886]
Length = 124
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ +R K+++ N+AN TPNY+A+DI SFE ++ AR + H++ D
Sbjct: 9 LGVHLNTVDFRIQRAKVIAGNLANVDTPNYKARDI-SFEQAMDSIASRARMN--HIQRRD 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S + GNTV + E K +E + + + +
Sbjct: 66 VS------QHYTLQYREPMQPSQDGNTVELGVEQAKFAENAMAFETSMTFLNMKLNGLRE 119
Query: 127 VVRG 130
++G
Sbjct: 120 AIKG 123
>gi|288553068|ref|YP_003425003.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
gi|288544228|gb|ADC48111.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
Length = 131
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ F++ + + RQ+ +S+NIANA TPNY+AK +S T+ ++T+ K
Sbjct: 7 STFRVLERGLDGSQLRQRAISDNIANAGTPNYQAKKVSFKHTLNEAMGTNLEANKTNAKH 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
D S + V P T +GN V I +E+ + + Y + +
Sbjct: 67 IDFSTTNTGTKVYTNPH---TTYNHNGNNVDIDHEMSELAKNQIYYNALIDRMNGRFQSL 123
Query: 125 MHVVRG 130
V+RG
Sbjct: 124 QTVIRG 129
>gi|78776566|ref|YP_392881.1| flagellar basal body rod protein FlgB [Sulfurimonas denitrificans
DSM 1251]
gi|78497106|gb|ABB43646.1| Flagellar basal-body rod protein FlgB [Sulfurimonas denitrificans
DSM 1251]
Length = 143
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-----------FLMART 57
+A++ ++ + RQ ++S NIANA TP YR +D+ FE L + +A+T
Sbjct: 11 LAAKALDYRAIRQDMISSNIANADTPFYRPRDVR-FEDTLAEQKAKILNLSIPKLSLAQT 69
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H+ D + + + GN+V + E + ++ +
Sbjct: 70 DSAHIPLKD----EPDNSKAKTFFRDGHMARNDGNSVDLDVETTEMSKNSIMFNALVGAM 125
Query: 118 KKLNSMVMHVV 128
KK + + V+
Sbjct: 126 KKDSGIFKGVI 136
>gi|297569163|ref|YP_003690507.1| flagellar basal-body rod protein FlgB [Desulfurivibrio alkaliphilus
AHT2]
gi|296925078|gb|ADH85888.1| flagellar basal-body rod protein FlgB [Desulfurivibrio alkaliphilus
AHT2]
Length = 128
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----LMARTHETHLK 63
++ N +ERQ ++ NIAN TP Y+ +D FE ++ Q +ART+ HL
Sbjct: 12 EVMHHSLNLRNERQGMIQSNIANLETPGYKVQDF-PFERVMAQVVSGQGQVARTNPRHLA 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
E V + E+ K + +Y++ +LI K
Sbjct: 71 IDPVEAARAGRFREEERP------------VDLDEEMLKLSENQMMYQVAAQLIAKKFEG 118
Query: 124 VMHVV 128
+ H++
Sbjct: 119 LRHII 123
>gi|88799018|ref|ZP_01114599.1| Flagellar basal body protein [Reinekea sp. MED297]
gi|88778245|gb|EAR09439.1| Flagellar basal body protein [Reinekea sp. MED297]
Length = 132
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
I SER +++ N+ANA TP ++A+D+ F+ IL Q+ MA T+
Sbjct: 8 NSLGIHDNALLVRSERSSVLANNLANADTPGFKARDM-DFKAILRGEVEKQQSLEMAETN 66
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ G E + GNTV E + Y + + +
Sbjct: 67 SRHIPGRQHEGW-------EKLYRHPLQPSIDGNTVEENVENKEFTENAMSYNASFEFLN 119
Query: 119 KLNSMVMHVVRG 130
+ +RG
Sbjct: 120 GKFKGLTGALRG 131
>gi|104782846|ref|YP_609344.1| flagellar basal body rod protein FlgB [Pseudomonas entomophila L48]
gi|95111833|emb|CAK16557.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudomonas entomophila L48]
Length = 135
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + ++R ++++ NIANA TPNY+A+D+ F ++L + + +
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDM-DFSSVL--AAEADKQQKGRIALDR 65
Query: 67 SSGLHWNAHVIEAPLD-----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + D + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGLAMADDTLQYRTPMQPSIDQNTVDAQMEQSNYAENAVGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|54308094|ref|YP_129114.1| flagellar basal body rod protein FlgB [Photobacterium profundum
SS9]
gi|46912520|emb|CAG19312.1| putative polar flagellar FlgB [Photobacterium profundum SS9]
Length = 131
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I +R +I++ NIANA+TP Y+AKD+ F L A T ++ S
Sbjct: 9 LGIHQYSVGVRGKRAEILASNIANANTPGYKAKDM-DFGRALK-----AATSGANIGLSQ 62
Query: 67 SSGLHWNA-------HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++G H +A + P TG GNTV E Y+ + +
Sbjct: 63 TNGRHISASANIMGEQMYRVPTQPDTG---DGNTVDAQLEQNLFMQNSLEYQASLDFLGA 119
Query: 120 LNSMVMHVVRG 130
+ +RG
Sbjct: 120 KFKNLSKALRG 130
>gi|167905087|ref|ZP_02492292.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
NCTC 13177]
Length = 134
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +ER K+++ N+AN TP YRA+D+ ++ A +
Sbjct: 19 LGLHPAALKLRAERTKVIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGD---AL 75
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G+ V GNTV + E ++++ + +
Sbjct: 76 TGGVTLGYRV-------PYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTKIKGLQT 128
Query: 127 VVRG 130
+ G
Sbjct: 129 AITG 132
>gi|254182895|ref|ZP_04889488.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
gi|184213429|gb|EDU10472.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
1655]
Length = 131
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +ER K+++ N+AN TP YRA+D+ ++ A +
Sbjct: 16 LGLHPAALKLRAERTKVIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGD---AL 72
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G+ V GNTV + E ++++ + +
Sbjct: 73 TGGVTLGYRV-------PYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTKIKGLQT 125
Query: 127 VVRG 130
+ G
Sbjct: 126 AITG 129
>gi|315180489|gb|ADT87403.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
Length = 104
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
+ +ER +++ NIANA TPNY+AKD+ SF ++ LM T ++
Sbjct: 2 MLQFRTERTSVLASNIANADTPNYKAKDV-SFNVVM--TGLMKETSAIGIQ--------- 49
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
E+ GNTV + +E + Y+ + + +K S + + G
Sbjct: 50 ----TESLYRIPVQRSRDGNTVELQSEQARFAQNNMEYQQSLQFLKSKISGLKRAIEG 103
>gi|302389655|ref|YP_003825476.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani
DSM 16646]
gi|302200283|gb|ADL07853.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani
DSM 16646]
Length = 136
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + + R ++++ NIAN TPN++ D+ FE +L + + + L +
Sbjct: 9 NLLQKIMDAKWMRHEVLANNIANVDTPNFKRSDVV-FEELLQKYL---KESNSRLPLKTT 64
Query: 68 SGLHWNAHVIEAPLDQTTGVQVS------GNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
S H + L +Q GN V I E+ + Y + + +++
Sbjct: 65 SEKHISNLKPTFDLKPEIVMQHDRVLRNDGNNVDIDKEMVELVENTLSYNIMAEQVQRQF 124
Query: 122 SMVMHVVR 129
S++ +
Sbjct: 125 SLLRSAIT 132
>gi|90411002|ref|ZP_01219016.1| flagellar basal body protein [Photobacterium profundum 3TCK]
gi|90328215|gb|EAS44526.1| flagellar basal body protein [Photobacterium profundum 3TCK]
Length = 131
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETH 61
I +R + ++ NIANA+TP Y+AKD+ F+ L N ++RT+ H
Sbjct: 9 LGIHQYSVGVRGKRAETLASNIANANTPGYKAKDM-DFDRALKAATSGANVGLSRTNGRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + P TG GNTV E Y+ + +
Sbjct: 68 ISA---SANVMGEQMYRVPTQPDTG---DGNTVDAQLEQNLFMQNSLEYQASLDFLGAKF 121
Query: 122 SMVMHVVRG 130
+ +RG
Sbjct: 122 KNLSKALRG 130
>gi|332294890|ref|YP_004436813.1| flagellar basal-body rod protein FlgB [Thermodesulfobium narugense
DSM 14796]
gi|332177993|gb|AEE13682.1| flagellar basal-body rod protein FlgB [Thermodesulfobium narugense
DSM 14796]
Length = 134
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-------NFLMART 57
F+I + +R +++++NIANA TP Y++ DI +F + L + N + RT
Sbjct: 6 PVFKILGFGLSGAYKRNEVLAQNIANADTPGYKSYDI-NFMSELKKALEEDQDNIPLKRT 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ H+ SD+ L+ + V++ + G ++GN V E YE +
Sbjct: 65 NPLHM--SDTPNLNKDFKVVK----RNEGTYINGNDVDPERENAMLLDNALYYESLLGSL 118
Query: 118 KKLNSMVMHVV 128
K ++ M+VV
Sbjct: 119 SKEFTIWMNVV 129
>gi|28897549|ref|NP_797154.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus RIMD
2210633]
gi|153839689|ref|ZP_01992356.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ3810]
gi|260364608|ref|ZP_05777210.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
K5030]
gi|260898117|ref|ZP_05906613.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
Peru-466]
gi|260901950|ref|ZP_05910345.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ4037]
gi|5361005|gb|AAD42912.1|U12817_6 polar flagellar FlgB homolog [Vibrio parahaemolyticus]
gi|28805761|dbj|BAC59038.1| polar flagellar FlgB [Vibrio parahaemolyticus RIMD 2210633]
gi|149746799|gb|EDM57787.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ3810]
gi|308086116|gb|EFO35811.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
Peru-466]
gi|308106785|gb|EFO44325.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ4037]
gi|308115123|gb|EFO52663.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
K5030]
gi|328473456|gb|EGF44304.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
10329]
Length = 131
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I +++S NIA A+TP Y+A+ + F L A T + S
Sbjct: 9 LGIHQHTVGVRERNAEVISTNIAQANTPGYKARGL-DFAKELQ-----AATSGASIGLSR 62
Query: 67 SSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ G H A P TG GNTV + E + ++ + +
Sbjct: 63 TDGRHIPATTTLMGDKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFLGG 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLTKAIKG 130
>gi|238924173|ref|YP_002937689.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656]
gi|238875848|gb|ACR75555.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656]
gi|291524902|emb|CBK90489.1| flagellar basal-body rod protein FlgB [Eubacterium rectale DSM
17629]
gi|291529043|emb|CBK94629.1| flagellar basal-body rod protein FlgB [Eubacterium rectale M104/1]
Length = 128
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ A+ +R+ I++ NI+N TP Y+ KD+ +FE +L+Q + K S+
Sbjct: 11 NVLTKAADASYQREAILANNISNVDTPGYKRKDL-NFEGVLSQELGRCKHQSLDKKISEL 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
A+V ++ GN V I E + + YE T I S + V
Sbjct: 70 DTSKLTANVYTD--HSNYSYRMDGNNVDIDTENVELASEQIKYEALTSSISSQFSRMKSV 127
Query: 128 V 128
+
Sbjct: 128 L 128
>gi|254496884|ref|ZP_05109732.1| flagellar basal body rod protein FlgB [Legionella drancourtii
LLAP12]
gi|254353903|gb|EET12590.1| flagellar basal body rod protein FlgB [Legionella drancourtii
LLAP12]
Length = 130
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 13/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHE 59
++F I ++ +R ++ NIANA+TP Y+A+D+ F +L + T
Sbjct: 7 SYFGIHAKALIGRDQRSSQLANNIANANTPRYKAQDV-DFNDLLAAQMAGSSQQLETTSP 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + + V T + + GNTV E + Y+ + +
Sbjct: 66 NHISSTGDFNANLKYRV-------TAQMSLDGNTVDKDLETMEFARNSLNYQASLNFLNN 118
Query: 120 LNSMVMHVVRG 130
+M ++G
Sbjct: 119 KIKTMMLALKG 129
>gi|251797448|ref|YP_003012179.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
gi|247545074|gb|ACT02093.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
Length = 132
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA------RTHET 60
F RQ +V+ NIAN TPN++ ++ FE +L+Q RT+E
Sbjct: 6 FGRLEGALKASELRQGVVANNIANVDTPNFKRSEVL-FEELLSQEMGGQTALQGKRTNER 64
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ +SG+ A + D + + + N V I E+ + Y + I
Sbjct: 65 HIPIGRTSGIVPTAQI---QTDNLSEMNNNENNVDIDREMSLLAKNQLSYNFYIQQINHD 121
Query: 121 NSMVMHVVRG 130
M+ + G
Sbjct: 122 VKMMKTAIEG 131
>gi|134280730|ref|ZP_01767440.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
gi|125657215|gb|ABN48703.1| flagellar basal body protein [Burkholderia pseudomallei]
gi|134247752|gb|EBA47836.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
305]
Length = 124
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +ER K+++ N+AN TP YRA+D+ ++ A +
Sbjct: 9 LGLHPTALKLRAERTKVIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGD---AL 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G+ V GNTV + E ++++ + +
Sbjct: 66 TGGVTLGYRV-------PYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTKIKGLQT 118
Query: 127 VVRG 130
+ G
Sbjct: 119 AITG 122
>gi|209695765|ref|YP_002263695.1| flagellar basal body rod protein FlgB [Aliivibrio salmonicida
LFI1238]
gi|208009718|emb|CAQ80022.1| flagellar basal-body rod protein FlgB [Aliivibrio salmonicida
LFI1238]
Length = 131
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I S+R ++++ NIA A+TP Y+AK + F+ + + T + + S
Sbjct: 9 LGIHQYTVGVRSQRAEMIATNIAQANTPGYKAKGM-DFQKAMQ-----SATSKASMGLSR 62
Query: 67 SSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ G H NA E T GNTV + E + ++ + + +
Sbjct: 63 TDGRHINASTRVAGEIQYRLPTQPDTGDGNTVDVDLERNLFMQNQLRHQASLEFLGSKFK 122
Query: 123 MVMHVVRG 130
+ ++G
Sbjct: 123 NLTKAIKG 130
>gi|15615024|ref|NP_243327.1| flagellar basal body rod protein FlgB [Bacillus halodurans C-125]
gi|10175081|dbj|BAB06180.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
Length = 132
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETHLKESDSSGLH 71
S +Q+ +S+NIAN TPNY+AK + +F+ + ++ R THE H+ + S G
Sbjct: 19 ASLQQRAISQNIANVDTPNYKAKKV-NFQKVFDEALSNTRLQAKQTHEKHIAFNRSQGSS 77
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + T +GN V + E+ + + Y + + + + V+RG
Sbjct: 78 PVETIRQ------TAYNHNGNNVDVDLEMTELAKNQIYYNALIERVNGNFNSLQTVIRG 130
>gi|224437871|ref|ZP_03658818.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
18818]
gi|313144320|ref|ZP_07806513.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
18818]
gi|313129351|gb|EFR46968.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
18818]
Length = 144
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-----FLMARTHETH 61
+ + + ++ S RQ +++ NIAN TP YR KD+ +FE L + R+++
Sbjct: 10 YSVVYKALDYRSIRQDMIASNIANVDTPFYRPKDV-NFEQYLARENKRIFGTGERSYKLD 68
Query: 62 LKESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ ++ L +V ++ + GN+V + E + G +Y+ T ++
Sbjct: 69 IAKTAKGHLDSRRNVKDSATMFWRDGHLAKNDGNSVDLDVETSEMGKNSTMYQALTSALR 128
Query: 119 KLNSMVMHV 127
+ + +
Sbjct: 129 RHKGIFSYA 137
>gi|85858814|ref|YP_461016.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
gi|85721905|gb|ABC76848.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
Length = 128
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
I S + S+R KI+ NIAN +P+Y+ KD + ++ A L +
Sbjct: 10 GILSGMLGFRSQRNKIILSNIANMDSPDYKPKDY-----VFKRDLSRAVADRGQLTLLKT 64
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G H A + E D V +G V + E+ Y L +++ + + V
Sbjct: 65 DGKHLPADLNEIS-DDDFEVVETGKNVNMDTEMTHLAENHLRYNLTVEMLARKFKGLNTV 123
Query: 128 VR 129
++
Sbjct: 124 LK 125
>gi|156973583|ref|YP_001444490.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC
BAA-1116]
gi|156525177|gb|ABU70263.1| hypothetical protein VIBHAR_01286 [Vibrio harveyi ATCC BAA-1116]
Length = 131
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y+++ + F L A T +
Sbjct: 7 NALGIHQYTVGVRERNTEVISTNIAQANTPGYKSRGL-DFAKELQ-----AATSGASIGL 60
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S + G H A P TG GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIPATTTLVGDKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFL 117
Query: 118 KKLNSMVMHVVRG 130
+ ++G
Sbjct: 118 GSKFKNLTKAIKG 130
>gi|269792949|ref|YP_003317853.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100584|gb|ACZ19571.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 134
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETH 61
+ + LS R V++N+ANA+TP Y +++ SFE L + +A + + H
Sbjct: 8 GVIQKDLEGLSRRMGAVAQNVANANTPRYARREV-SFEDQLAAVIDQPRRLPLAVSDQRH 66
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ ++ N E ++ + GN V E+ K + +Y+ ++++ +
Sbjct: 67 M--TNVPLGLDNVKPREDRVEDEI-YRYDGNNVDPEVEMAKLAETRMMYQAMSRVLSRKV 123
Query: 122 SMVMHVVRG 130
+M + G
Sbjct: 124 AMYRTAIGG 132
>gi|172057891|ref|YP_001814351.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
255-15]
gi|171990412|gb|ACB61334.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
255-15]
Length = 120
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +Q + QK++S NIAN TP Y+AK + F +L+ M
Sbjct: 8 YATMTQAVDRTVAAQKVISTNIANVDTPGYKAKRVV-FSDVLDSEMKM------------ 54
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S H + ++Q++ ++ GN V I E+ + + YE + + + S +
Sbjct: 55 SLKRHATIGTSGSIVEQSSAMRNDGNGVDIDLEMSELSRNQIEYEALVEQLNRKFSGIQS 114
Query: 127 VVRG 130
V+RG
Sbjct: 115 VIRG 118
>gi|54297179|ref|YP_123548.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
Paris]
gi|148358803|ref|YP_001250010.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
Corby]
gi|296106848|ref|YP_003618548.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
2300/99 Alcoy]
gi|53750964|emb|CAH12375.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila str.
Paris]
gi|148280576|gb|ABQ54664.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
Corby]
gi|295648749|gb|ADG24596.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
2300/99 Alcoy]
Length = 130
Score = 76.9 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHE 59
++F I ++ +R +++ NIAN +TPN++A+D+ F +L + T +
Sbjct: 7 SYFGIHAKALIARDQRASVLANNIANVNTPNFKARDV-DFNEVLTATMAGNSQQLRVTSD 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + H + T + GNTV E + Y+ + +
Sbjct: 66 QHISTNADFMTHLKYRM-------THHASLDGNTVDKDMETTEFARNALNYQASLSFLNG 118
Query: 120 LNSMVMHVVRG 130
++ ++G
Sbjct: 119 KIKSMLTALKG 129
>gi|332525069|ref|ZP_08401249.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
gi|332108358|gb|EGJ09582.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
Length = 150
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 16/138 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL----------MAR 56
+Q SERQ++++ NIANA TP Y A+D F L +
Sbjct: 9 LDFQAQALALRSERQRVIASNIANADTPGYVARDF-DFSQALREATASLPRPPASGAAPA 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYE 111
L + GL + P + + NTV + E +E
Sbjct: 68 GGGNELGSPVARGLLAEGFGRQRPATDLRYGAPSQTNLDSNTVDMDRERAAFVDNTLKFE 127
Query: 112 LNTKLIKKLNSMVMHVVR 129
+ + + + ++
Sbjct: 128 ASLRFLNGSVRTLTDAMK 145
>gi|89895708|ref|YP_519195.1| hypothetical protein DSY2962 [Desulfitobacterium hafniense Y51]
gi|89335156|dbj|BAE84751.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 129
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I + + S R K+++ N+AN TP+++ D+ F+ +L + L
Sbjct: 4 PVINILEKSLDASSLRYKVLANNVANVDTPDFKRSDV-DFDLLLGEAMGQT---GGELPL 59
Query: 65 SDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+S H ++ Q T + GN V I E+ Y T+ I
Sbjct: 60 KVTSERHLQKTGFDSSGVVQAQGTTYRNDGNNVDIDKEMVNVAENGIYYNSVTRAISAQL 119
Query: 122 SMVMHVVR 129
S + V+
Sbjct: 120 SHLRTVIT 127
>gi|258514000|ref|YP_003190222.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
DSM 771]
gi|257777705|gb|ACV61599.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
DSM 771]
Length = 134
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETH 61
++ + + S RQ++++ NIAN +TP ++ ++ FE+IL +N R + H
Sbjct: 9 LRLLEKAIDAGSLRQRVIANNIANINTPGFKKSSVA-FESILKKNLNTGRIPLKYSDSRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+DS +A + TT ++ GN V + E+ + Y + + +
Sbjct: 68 FGAADS----LDAINPTVVKENTTSMRSDGNNVDVEQEMVRLVLNTINYNADIQELNNRL 123
Query: 122 SMVMHVVRG 130
+ + V+RG
Sbjct: 124 NSLGVVIRG 132
>gi|153834443|ref|ZP_01987110.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
gi|269961596|ref|ZP_06175958.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
gi|148869139|gb|EDL68171.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
gi|269833637|gb|EEZ87734.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
Length = 131
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y+++ + F L A T +
Sbjct: 7 NALGIHQYTVGVRERNAEVISTNIAQANTPGYKSRGL-DFAKELQ-----AATSGASIGL 60
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S + G H A P TG GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIPATTTLVGDKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFL 117
Query: 118 KKLNSMVMHVVRG 130
+ ++G
Sbjct: 118 GSKFKNLTKAIKG 130
>gi|27363708|ref|NP_759236.1| flagellar basal body rod protein FlgB [Vibrio vulnificus CMCP6]
gi|37679144|ref|NP_933753.1| flagellar basal body rod protein FlgB [Vibrio vulnificus YJ016]
gi|320157112|ref|YP_004189491.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus MO6-24/O]
gi|27359824|gb|AAO08763.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus CMCP6]
gi|37197886|dbj|BAC93724.1| flagellar basal body protein FlgB [Vibrio vulnificus YJ016]
gi|319932424|gb|ADV87288.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus MO6-24/O]
Length = 131
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETH 61
I +++S NIA A+TP Y+A+ + F L + ++RT H
Sbjct: 9 LGIHQHTVGVRERNAEVISTNIAQANTPGYKARGL-DFSKELQAASSGASIGLSRTDGRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + + + P TG GNTV + E + ++ + +
Sbjct: 68 IPATTT---VMGEKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFLGGKF 121
Query: 122 SMVMHVVRG 130
+ ++G
Sbjct: 122 KNLTKAIKG 130
>gi|307720252|ref|YP_003891392.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
DSM 16294]
gi|306978345|gb|ADN08380.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
DSM 16294]
Length = 143
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ ++ ++ + RQ ++S NIANA TP Y+ +DIS + ++ + + + + LK + ++
Sbjct: 11 LLAKALDYRAARQDMISSNIANADTPYYKPRDISFEDALIAKKNELYQDNAHQLKMAQTN 70
Query: 69 GLHWNAHVIEAPLDQT------TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
H + + T + GN+V I E + ++ KK +
Sbjct: 71 SGHLQPKAQASQIKPTLYFRDGHMARNDGNSVDIDVETTEMSKNSIMFNAIVMASKKDAA 130
Query: 123 MVMHVV 128
+ V+
Sbjct: 131 IFKSVI 136
>gi|52841448|ref|YP_095247.1| flagellar basal body rod protein FlgB [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54294160|ref|YP_126575.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
Lens]
gi|52628559|gb|AAU27300.1| flagellar basal body rod protein FlgB [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53753992|emb|CAH15463.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila str.
Lens]
gi|307609974|emb|CBW99503.1| flagellar basal-body rod protein FlgB [Legionella pneumophila 130b]
Length = 130
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-----LMARTHE 59
++F I ++ +R +++ NIAN +TPN++A+D+ F +L + T +
Sbjct: 7 SYFGIHAKALIARDQRASVLANNIANVNTPNFKARDV-DFNEVLTATMAGNSQQLRVTSD 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + H + T + GNTV E + Y+ + +
Sbjct: 66 QHINTNADFMTHLKYRM-------THHASLDGNTVDKDMETTEFARNALNYQASLSFLNG 118
Query: 120 LNSMVMHVVRG 130
++ ++G
Sbjct: 119 KIKSMLTALKG 129
>gi|163802606|ref|ZP_02196498.1| flagellar basal body protein [Vibrio sp. AND4]
gi|159173689|gb|EDP58508.1| flagellar basal body protein [Vibrio sp. AND4]
Length = 131
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y+++ + F L A T +
Sbjct: 7 NALGIHQHTVGVRERNAEVISTNIAQANTPGYKSRGL-DFAKELQ-----AATSGASIGL 60
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S + G H A P TG GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIPATTTLVGDKLYRLPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFL 117
Query: 118 KKLNSMVMHVVRG 130
+ ++G
Sbjct: 118 GGKFKNLTKAIKG 130
>gi|317121812|ref|YP_004101815.1| flagellar basal-body rod protein FlgB [Thermaerobacter marianensis
DSM 12885]
gi|315591792|gb|ADU51088.1| flagellar basal-body rod protein FlgB [Thermaerobacter marianensis
DSM 12885]
Length = 156
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 34/150 (22%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ----------------- 50
+ L+ RQ+++++N+ANA TP Y+ D+ F L +
Sbjct: 7 DRLAAGLEVLALRQRLLAQNVANADTPGYKRYDV-DFARALEERLGPPATGAGTGGAPAG 65
Query: 51 ------------NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITN 98
+A TH HL +G A E T ++ GN V +
Sbjct: 66 GPAGAPATAPGGRLALAITHPRHLSGRAGTGDPARAVYRETV----TALRNDGNNVDLDA 121
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ + Y+ + + +++ V+
Sbjct: 122 EMARLAETGLYYQALVRQLSDRIALLRTVI 151
>gi|148980305|ref|ZP_01815992.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
gi|145961324|gb|EDK26634.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
Length = 115
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + +R ++S NIAN TPNY+A D+ FE +L+
Sbjct: 8 LGVHPKMVQFRLDRAAVLSSNIANVDTPNYKAMDLR-FEAVLS---------------GI 51
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
W A GNTV + NE + Y + ++ + +
Sbjct: 52 GHSKDWYIGTA-AQYRIPVQRTRDGNTVELENEQARFAKNVMDYHQSLAFLQSKINGIKS 110
Query: 127 VVRG 130
++G
Sbjct: 111 AIKG 114
>gi|331006031|ref|ZP_08329373.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC1989]
gi|330420160|gb|EGG94484.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC1989]
Length = 133
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 14/131 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-------NQNFLMARTHE 59
+ Q S+R +++EN+ANA TP Y+AKDI F+ IL + M TH
Sbjct: 9 LGVHEQAFRLRSDRAGLLAENLANADTPGYKAKDI-DFKGILGGQVQMQSSGNQMKTTHS 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H +++S + + GNTV E + +E + +
Sbjct: 68 NHFAITNNSSE------YDMLYRTPQQPSIDGNTVEEQVENAEYMKNSLAFEASFNFLNS 121
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 122 KFKKLTSAIKG 132
>gi|238927421|ref|ZP_04659181.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
gi|238884703|gb|EEQ48341.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
Length = 139
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------AR 56
+ ++S+ + + R +++S NIAN +TP +R + FE +L + + R
Sbjct: 9 SVIDVSSRALSAANLRHEVLSNNIANVNTPYFRRSHVR-FEDLLRKELGLEDDPLMKLVR 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
TH+ HL H + TT +++ GN V I E+ + + Y
Sbjct: 68 THDRHLPIPYHGKTHAFIE-----QESTTNMRLDGNNVDIDIEMAEVAKNQLYYNALANQ 122
Query: 117 IKKLNSMVMHVVR 129
+ + V+
Sbjct: 123 MSSHIGKLKSVIT 135
>gi|254299689|ref|ZP_04967138.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
406e]
gi|157809389|gb|EDO86559.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
406e]
Length = 131
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +ER K+++ N+AN TP Y+A+D+ ++ A +
Sbjct: 16 LGLHPAALKLRAERTKVIASNLANLDTPGYQARDLDFKRSLAEAGGDGAHARPGD---AL 72
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G+ V GNTV + E ++++ + +
Sbjct: 73 TGGVTLGYRV-------PYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTKIKGLQT 125
Query: 127 VVRG 130
+ G
Sbjct: 126 AITG 129
>gi|126443247|ref|YP_001061243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
668]
gi|167725927|ref|ZP_02409163.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
DM98]
gi|126222738|gb|ABN86243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
668]
Length = 124
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +ER K+++ N+AN TP Y+A+D+ ++ A +
Sbjct: 9 LGLHPAALKLRAERTKVIASNLANLDTPGYQARDLDFKRSLAEAGGDGAHARPGD---AL 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ G+ V GNTV + E ++++ + +
Sbjct: 66 TGGVTLGYRV-------PYQAAQDGNTVELGIEQAAFAQNAVDFQMSLTFLNTKIKGLQT 118
Query: 127 VVRG 130
+ G
Sbjct: 119 AITG 122
>gi|167465319|ref|ZP_02330408.1| Flagellar basal body protein [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 136
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMART 57
+ + + + RQ++++ N+AN TP ++ D+ FE +L + RT
Sbjct: 7 PSLSLMERSLDASALRQRVIANNVANVDTPQFKRSDVL-FEELLQNEITGSVKPLEGYRT 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H K S + D+ T + +GN V + E+ + Y + +
Sbjct: 66 DPRHFKIGQPSL----PEGAQISTDEHTAMNNNGNNVDMDYEMALMAKNQLKYNTLVQQM 121
Query: 118 KKLNSMVMHVVRG 130
+ V+ G
Sbjct: 122 NADFKKLRTVMEG 134
>gi|78067840|ref|YP_370609.1| flagellar basal body rod protein FlgB [Burkholderia sp. 383]
gi|77968585|gb|ABB09965.1| Flagellar basal-body rod protein FlgB [Burkholderia sp. 383]
Length = 162
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 30/152 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIAN+ TP Y+A+D+ F + L +
Sbjct: 9 FAFGRQALDVRAYRQELLSSNIANSDTPGYQARDV-DFASTLARSLKQTGGGLAPSNAAQ 67
Query: 51 -----------NFLMARTHETHLKESDS--SGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
M T H+ + + A + GNTV +
Sbjct: 68 LPMAQPAGVTSGMSMVSTAAGHMAGTAKLIPTGGPSDDYGRAQYRMPLQPALDGNTVDLD 127
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E + + Y+ ++ + ++ +
Sbjct: 128 VERVQFANNALHYQTGMTVMTQQIKAMIAAIT 159
>gi|77460472|ref|YP_349979.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
Pf0-1]
gi|77384475|gb|ABA75988.1| putative flagellar basal-body rod protein FlgB (proximal rod
protein) [Pseudomonas fluorescens Pf0-1]
Length = 135
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + + ++R ++++ NIANA TPNY+A+D+ F +L + +
Sbjct: 9 LGIHEKALGFRAQRAEVLANNIANADTPNYKARDLE-FSKVLEAQSQKNA--NGTIALNM 65
Query: 67 SSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGLGNGDESLMYRTPMQPSIDQNTVDAQLEQSNYAENAVGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVSALRG 134
>gi|256830789|ref|YP_003159517.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
DSM 4028]
gi|256579965|gb|ACU91101.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
DSM 4028]
Length = 136
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHL 62
+ ++ ++ +RQ IVS N+AN +TP Y+A+ + + + L+++ +ARTH H
Sbjct: 10 DLTAKVMDFQLQRQNIVSANLANINTPGYKARTLEFEKDLQAALGLSESGAVARTHPDHF 69
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ ++ + GV V + E+ LY +++K +
Sbjct: 70 PLAFAADQTEASVTKSLTPRVVQGVD----NVDLDKEMAAMAKNNLLYNTLATVMQKSFT 125
Query: 123 MVMHVV 128
+ +
Sbjct: 126 GLKQTI 131
>gi|114566382|ref|YP_753536.1| hypothetical protein Swol_0846 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337317|gb|ABI68165.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 138
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ ++ + + R ++++NIANA TP ++ +++ FE + + T + L ++S
Sbjct: 13 LLNKAMDVGTLRNDVIADNIANADTPKFKRREVI-FEEKMKKALE-GTTDQLGLNLTNSR 70
Query: 69 GLHWNAHVIEAPLD----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + ++ + + + N V I NE+ K K Y+ ++ + ++
Sbjct: 71 HIQMEGNNMDIEPEVRVLEDLTFRNDENNVDIDNEMAKMTKNKINYDAVSRSMSNEIRLL 130
Query: 125 MHVVRG 130
+ G
Sbjct: 131 RMAITG 136
>gi|257871286|ref|ZP_05650939.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2]
gi|257805450|gb|EEV34272.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2]
Length = 136
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + + N ++R +++S NIAN +T Y+AK I FE+ L Q + T
Sbjct: 18 LDTYNLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIV-FESELKQALASSGTD----A 72
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+++S + E + TT ++ +GN V + E+ Y T + M
Sbjct: 73 ATEASVSQVKPKITE---NATTSIKDNGNNVDLEVEMLDQAANGLYYSALTAQVNGRLQM 129
Query: 124 VMHVV 128
+ V+
Sbjct: 130 MNLVL 134
>gi|218659923|ref|ZP_03515853.1| flagellar basal body rod protein FlgB [Rhizobium etli IE4771]
Length = 44
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
MQPI F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F
Sbjct: 1 MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPF 44
>gi|56460255|ref|YP_155536.1| flagellar basal body protein [Idiomarina loihiensis L2TR]
gi|56179265|gb|AAV81987.1| Flagellar basal body protein [Idiomarina loihiensis L2TR]
Length = 134
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 13/131 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHE 59
I ++R ++++ NIANA TP Y+AK + F+ L Q N MARTHE
Sbjct: 8 LMGIQQHTLGVRTQRAELIANNIANADTPGYKAKGL-DFQQALQQAQRGMENHKMARTHE 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H P TG GNTV + E YE+ +
Sbjct: 67 QHFSVEV---KPQGTEKFRTPSQPDTG---DGNTVDVQLEQNLYAQNALEYEMTMNFLDG 120
Query: 120 LNSMVMHVVRG 130
S V + G
Sbjct: 121 RISGVKKALGG 131
>gi|322382306|ref|ZP_08056213.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153659|gb|EFX46034.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 137
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-------QNFLMART 57
+ + + + RQ++++ N+AN TP ++ D+ FE +L + RT
Sbjct: 8 PSLSLMERSLDASALRQRVIANNVANVDTPQFKRSDVL-FEELLQNEITGSVKPLEGYRT 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
H K S + D+ T + +GN V + E+ + Y + +
Sbjct: 67 DPRHFKIGQPSL----PEGAQISTDEHTAMNNNGNNVDMDYEMALMAKNQLKYNTLVQQM 122
Query: 118 KKLNSMVMHVVRG 130
+ V+ G
Sbjct: 123 NADFKKLRTVMEG 135
>gi|149191150|ref|ZP_01869408.1| flagellar basal body rod protein [Vibrio shilonii AK1]
gi|148834988|gb|EDL51967.1| flagellar basal body rod protein [Vibrio shilonii AK1]
Length = 115
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + +R ++S NIAN TPNY+A D+ F+ +L+
Sbjct: 8 LGVHPKIVQFRLDRAAVLSSNIANVDTPNYKAMDLK-FDAVLS---------------GI 51
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ W A GNTV + NE + Y + ++ + +
Sbjct: 52 GNSKDWYIDTS-AQYRIPVQRTRDGNTVELENEQARFAKNVMDYHQSLAFLQSKINGIKT 110
Query: 127 VVRG 130
++G
Sbjct: 111 AIKG 114
>gi|320325090|gb|EFW81159.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
glycinea str. B076]
Length = 135
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + N+ ++R ++++ NI+NA TPN++A+D+ F ++L + + +
Sbjct: 9 LGIHEKALNFRAQRAEVLANNISNADTPNFKARDL-DFSSVL--AAENDKVQNGYFALNK 65
Query: 67 SSGLHWNAHVIEAPL-----DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ H A + + + NTV E ++ + L+
Sbjct: 66 TNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVEQASYTENAMGFQASFTLLNSKF 125
Query: 122 SMVMHVVRG 130
++ +RG
Sbjct: 126 KGLVAALRG 134
>gi|197335280|ref|YP_002156703.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11]
gi|197316770|gb|ACH66217.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11]
Length = 131
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I SER ++++ NIA A+TP Y+AK + F+ L + T + + S
Sbjct: 9 LGIHQYTVGVRSERAEMLATNIAQANTPGYKAKGM-DFQKALQ-----SATSKASMGLSR 62
Query: 67 SSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ G H NA E T GNTV + E + ++ + +
Sbjct: 63 TDGRHINASTRMAGEIQYRLPTQPDTGDGNTVDVDLERNLFMQNQLRHQASLDFLGSKFK 122
Query: 123 MVMHVVRG 130
+ ++G
Sbjct: 123 NLTKAIKG 130
>gi|289523577|ref|ZP_06440431.1| flagellar basal-body rod protein FlgB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503269|gb|EFD24433.1| flagellar basal-body rod protein FlgB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 135
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--------MARTHE 59
+ + LS+R + +S+N+AN +TP Y A+ +FE L + +A THE
Sbjct: 7 DVITLGMKGLSKRFEAISQNVANTNTPGY-ARSEVTFEDELREALSVSKRPKLPLATTHE 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ + + GN V + E+ K + Y L+ K
Sbjct: 66 AHITNLPRDIKGITPKEHRVVGELA---RWDGNGVDLDIEMSKLAQARMTYTALASLMSK 122
Query: 120 LNSMVMHVVRG 130
+ G
Sbjct: 123 RVGSYKTAIGG 133
>gi|84388088|ref|ZP_00990984.1| flagellar basal body protein [Vibrio splendidus 12B01]
gi|84377155|gb|EAP94025.1| flagellar basal body protein [Vibrio splendidus 12B01]
Length = 131
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 12/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHE 59
I +++S NIA A+TP Y+AK + F+ L + ++RT
Sbjct: 7 NALGIHQHTVGVRERNAEVLSTNIAQANTPGYKAKGL-DFKKSLQAASSGASIGLSRTDG 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + P TG GNTV + E + ++ + +
Sbjct: 66 RHISASTTVNGETK---YRIPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFLGS 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLTKAIKG 130
>gi|254785368|ref|YP_003072797.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae
T7901]
gi|237687018|gb|ACR14282.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae
T7901]
Length = 134
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 13/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHE 59
I ER +++ N+AN TP Y+A+D +F+ L++ + T
Sbjct: 9 LGIHESAMRLRGERAGMLASNLANTDTPGYKARDF-NFQEALDRQMTGRNGDFSLQTTQH 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H++ G ++A + GNTV E + ++ + +
Sbjct: 68 AHIR-----GGVKGLGSVDALYRVPNQPSIDGNTVEEQVEHAEFMKNNLEFQASFTFLNS 122
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 123 KFKGLSKAIKG 133
>gi|84514836|ref|ZP_01002199.1| Flagellar proximal rod protein FlgB [Loktanella vestfoldensis
SKA53]
gi|84510995|gb|EAQ07449.1| Flagellar proximal rod protein FlgB [Loktanella vestfoldensis
SKA53]
Length = 105
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
++ NIANA TP Y+A+DI F+ L + + + + D+ ++
Sbjct: 2 LASNIANAGTPGYKARDI-DFDRELARQAGDSPIRKNDGRHIDN---LAGTSGVDVQYRV 57
Query: 84 TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ GNTV ++ E + Y + + S +M ++G
Sbjct: 58 PLNPSLDGNTVELSVEQMEFSENSLRYMTTLSFLNRRISGLMTAIKG 104
>gi|292669735|ref|ZP_06603161.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
43541]
gi|292648532|gb|EFF66504.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
43541]
Length = 140
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 14/132 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------AR 56
I S+ S R +++S NIAN +TP +R + FE +L Q M R
Sbjct: 9 PTIDIGSRAMAAASLRHEVLSNNIANVNTPYFRRSHVR-FEDLLKQELGMDSDPLMKVVR 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
TH+ HL + H A + D TT +++ GN V I E+ + + Y
Sbjct: 68 THDRHLPAA----FHGKARAV-IEQDATTNMRLDGNNVDIDIEMAEVAKNQLYYSALANA 122
Query: 117 IKKLNSMVMHVV 128
+ + + V+
Sbjct: 123 LGGHINKLKTVI 134
>gi|325295410|ref|YP_004281924.1| flagellar basal-body rod protein FlgB [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065858|gb|ADY73865.1| flagellar basal-body rod protein FlgB [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 124
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
+ A++ ER KI+ NIANA TP Y+ +D+ FE L + +T H S S
Sbjct: 12 ADMASFFLERSKIIQSNIANADTPFYKPRDLV-FEKELESQLKLKKTDPRHFDVSQSRKK 70
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
G + N V + EL K +++ +++KK + ++G
Sbjct: 71 FKIVE-----FQNVNGYDM--NKVNVNEELAKLAESAIMFKSLNEVLKKEIGKLKLSIQG 123
>gi|148976391|ref|ZP_01813097.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
gi|145964214|gb|EDK29470.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
Length = 131
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 10/130 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y+AK + F+ L A + +
Sbjct: 7 NALGIHQHTVGVRERNAEVLSTNIAQANTPGYKAKGL-DFKKSLQ-----AASSGASIGL 60
Query: 65 SDSSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
S + G H +A E T GNTV + E + ++ + +
Sbjct: 61 SRTDGRHISAETTVNGETKYRIPTQPDTGDGNTVDLDLERNLFMQNQIRHQASLDFLGSK 120
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 121 FKNLTKAIKG 130
>gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
168]
gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
168]
Length = 131
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTHET 60
+ S+R + +++NIAN TPNY+ KD+ F + L N + T +
Sbjct: 5 LDFLKLGLDGASKRHRALADNIANVDTPNYKRKDV-DFVSTLKSIASQNAKLKLETTDDG 63
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + S + + I T + GN V I E+ + Y + I +
Sbjct: 64 HISGTGSVLKPFKEYRIT-----NTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQISQK 118
Query: 121 NSMVMHVV 128
++ +
Sbjct: 119 FKILNETI 126
>gi|83716884|ref|YP_438386.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
E264]
gi|167614834|ref|ZP_02383469.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
Bt4]
gi|83650709|gb|ABC34773.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
E264]
Length = 124
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ +ER KI++ N+AN TP Y+A+D+ F+ L +
Sbjct: 9 LDLHPTALKLRAERTKIIASNLANLDTPGYQAQDL-DFKRSLAEAAGGGAGARLG----- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
A + GNTV + E ++++ + +
Sbjct: 63 ----DAPAGGVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAIDFQMSLTFLNAKIKGLQT 118
Query: 127 VVRG 130
+ G
Sbjct: 119 AITG 122
>gi|119947180|ref|YP_944860.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii 37]
gi|119865784|gb|ABM05261.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii 37]
Length = 117
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I +Q + ++R +I++ N+AN+ TPNY+A+D++ + +T L S
Sbjct: 9 LGIHTQLLQFHTQRTQILANNLANSDTPNYKAQDLT-----YSATMNKINARDTQLNLS- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
E +GNTV + E K Y+ + +K S +
Sbjct: 63 ----------KEIFFRIPFQRSENGNTVELGIEQAKFAENNLNYQTSLNFLKMKISGLKS 112
Query: 127 VVRG 130
+ G
Sbjct: 113 AIEG 116
>gi|254458790|ref|ZP_05072214.1| flagellar basal-body rod protein FlgB [Campylobacterales bacterium
GD 1]
gi|207084556|gb|EDZ61844.1| flagellar basal-body rod protein FlgB [Campylobacterales bacterium
GD 1]
Length = 143
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ S ++ + RQ ++S NIANA TP YR +DIS + + + + L + +
Sbjct: 10 GLISDALDYRAMRQDMISSNIANADTPFYRPRDISFADALAAKKADILNEGSDKLALAQT 69
Query: 68 SGLHWNAHVIEAPLDQTT------GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+G H H + TT + GN+V + E + ++ + KK +
Sbjct: 70 NGAHIPLHNEKGNYKPTTFYRDGHMARNDGNSVDLDVETTEMSKNSVMFNALIQANKKDS 129
Query: 122 SMVMHVV 128
+ V+
Sbjct: 130 MIFKSVI 136
>gi|158320509|ref|YP_001513016.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
OhILAs]
gi|158140708|gb|ABW19020.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
OhILAs]
Length = 131
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR-----THETHL 62
I ++ + R ++++ NIANA TPN++ D+ FE +L ++ ++ T+ H+
Sbjct: 6 NILTKALDASWRRNEVITNNIANAETPNFKRSDVI-FEDVLREHLNASKLKGTITNANHI 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + D T ++ N V I E+ + + +Y L T I+
Sbjct: 65 PINGGHLKDIQPQIKT---DHTYSARIDNNNVEIDVEMAERAKNEIMYNLLTTRIQSGFK 121
Query: 123 MVMHVV 128
+ +V+
Sbjct: 122 KIKYVI 127
>gi|225181614|ref|ZP_03735055.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus
AHT 1]
gi|225167722|gb|EEG76532.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus
AHT 1]
Length = 137
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETHLK 63
+ + ER ++++ N+AN +TP ++ +D+ SFE L Q +A THE H+
Sbjct: 13 LQKGLDAAGERNRVMAHNVANVNTPMFKRQDV-SFEKQLRQALAAPSRLPLATTHERHV- 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ D+++ ++ GN V I E+ + Y T+++ + S+
Sbjct: 71 ---GGQKSLQDVGHKVSTDRSSAMRSDGNNVDIDREMALMATNQLNYNAMTQVLNERYSL 127
Query: 124 VMHVV 128
+ +V+
Sbjct: 128 LRYVI 132
>gi|56551510|ref|YP_162349.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761154|ref|ZP_04759243.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260752883|ref|YP_003225776.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|4378861|gb|AAD19729.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
ZM4]
gi|56543084|gb|AAV89238.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374773|gb|EER64234.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552246|gb|ACV75192.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 117
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T F I ++R +++ NIANA+TPNY+A+DI F L + T E
Sbjct: 6 TLFGIQGDALVLRNQRMAMLASNIANAATPNYKARDI-DFNKALGEATSGNETEE----- 59
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+A P+D++ GNTV + E + Y I+ S V
Sbjct: 60 -----AVNDAMGYRVPIDKSI----DGNTVELPTEQAQFAENGLKYRSTLTFIQDRMSDV 110
Query: 125 MHVVRG 130
M ++G
Sbjct: 111 MSSLKG 116
>gi|327441058|dbj|BAK17423.1| flagellar basal body protein [Solibacillus silvestris StLB046]
Length = 130
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ + + + K +++NIAN TPNY+ K++ SF+ +LN T + ++
Sbjct: 11 LEKGLFYATMKNKTIAQNIANVDTPNYKTKEV-SFKDVLND--AKQATIPAYRTDARHFD 67
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N ++ + +GN V + E K Y + S + +VV+
Sbjct: 68 FKINIGSSGVYSNENFRSRANGNAVNMDAEQAKLAENTIYYNALIDRVSSKFSTLNNVVK 127
Query: 130 G 130
G
Sbjct: 128 G 128
>gi|59712484|ref|YP_205260.1| flagellar basal body rod protein FlgB [Vibrio fischeri ES114]
gi|24459274|gb|AAL86627.1| FlgB [Vibrio fischeri ES114]
gi|59480585|gb|AAW86372.1| flagellar proximal rod protein FlgB [Vibrio fischeri ES114]
Length = 131
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +ER ++++ NIA A+TP Y+AK + F+ L + T + +
Sbjct: 7 NALGIHQYTVGVRAERAEMLATNIAQANTPGYKAKGM-DFQKALQ-----SATSKASMGL 60
Query: 65 SDSSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
S + G H NA E T GNTV + E + ++ + +
Sbjct: 61 SRTDGRHINASTRMAGEIQYRLPTQPDTGDGNTVDVDLERNLFMQNQLRHQASLDFLGSK 120
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 121 FKNLTKAIKG 130
>gi|260893878|ref|YP_003239975.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
gi|260866019|gb|ACX53125.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
Length = 133
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFET----ILNQNFLMARTHETHLKESDS 67
+ + + RQ+++++N+AN TP ++ K + FE LN + T H
Sbjct: 14 KTLDAAALRQRVIADNLANVDTPGFK-KGVVRFEEELKRALNAPLPLRTTDPRHF----P 68
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S + D T ++ GN V + ++ Y T+++ + +V
Sbjct: 69 SPVPLEKVSPRVERDYFTSMRADGNNVDVDEQMVNLVVNALFYHALTQIVAGRYASWHYV 128
Query: 128 VRG 130
+ G
Sbjct: 129 ING 131
>gi|268680293|ref|YP_003304724.1| flagellar basal-body rod protein FlgB [Sulfurospirillum deleyianum
DSM 6946]
gi|268618324|gb|ACZ12689.1| flagellar basal-body rod protein FlgB [Sulfurospirillum deleyianum
DSM 6946]
Length = 144
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 18/125 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-------------NQNFLM 54
Q+ N + RQ ++S NIAN TP Y+A+DI FE+ L M
Sbjct: 10 QLLEAGLNARAMRQDLISSNIANIDTPFYKARDI-DFESALIEKKREIYGQNSTADTLEM 68
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A+T +HLK +++ L + GNTV + E + G +++
Sbjct: 69 AQTDTSHLKGIT----DFDSSKSTLYLRDGHMARNDGNTVDLDVETSELGKNAMMFDALM 124
Query: 115 KLIKK 119
++K
Sbjct: 125 SGLRK 129
>gi|317153715|ref|YP_004121763.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis
Aspo-2]
gi|316943966|gb|ADU63017.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis
Aspo-2]
Length = 136
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
Q+ ++ + ERQ +V NI+N TP Y+A+ + FE L Q M RT ++H
Sbjct: 10 QLTAKVLDLRLERQNVVMGNISNVDTPEYKARRLE-FEDKLQQALNHDARGKMTRTQQSH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L ++ + + G +V + E+ G +Y +IKK
Sbjct: 69 LPAVFNADGFQGDGIKDFKPRHVHGED----SVDMDKEMAIMGKNGLMYNALASVIKKNF 124
Query: 122 SMVMHVV 128
+ V+
Sbjct: 125 EGLQKVI 131
>gi|160897165|ref|YP_001562747.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
gi|160362749|gb|ABX34362.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
Length = 129
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + F IA ++R I++ NIANA TP Y+AKD+ E + N M T
Sbjct: 1 MSEVRFEDIA---LKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSST 57
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
SS + + + + + NTV + E EL
Sbjct: 58 SKGHIPSSEMKS-IYDTQVAFRPASQNSLDRNTVDLDQERASFIDNAIRTELA 109
>gi|297584032|ref|YP_003699812.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
MLS10]
gi|297142489|gb|ADH99246.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
MLS10]
Length = 134
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK- 63
Q+ N + RQ +S+N+AN TPNY+AK + F L + R L
Sbjct: 7 PLNQLLETSLNASARRQDTISDNVANVDTPNYKAKK-TVFNHQLQRAMDDQRLRANRLDD 65
Query: 64 ---ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKK 119
E H+IE T +GN V I E+ + Y L ++ +
Sbjct: 66 RHIEFGGPPRSDAPHIIE---RTNTQYNHNGNNVDIDKEMADMAENQIYYNALIDRMNGR 122
Query: 120 LNSMVMHVVRG 130
NS+ + RG
Sbjct: 123 FNSVRTAMGRG 133
>gi|86146158|ref|ZP_01064484.1| flagellar basal body protein [Vibrio sp. MED222]
gi|218708801|ref|YP_002416422.1| flagellar basal body rod protein FlgB [Vibrio splendidus LGP32]
gi|85836105|gb|EAQ54237.1| flagellar basal body protein [Vibrio sp. MED222]
gi|218321820|emb|CAV17788.1| Flagellar basal body protein FlgB [Vibrio splendidus LGP32]
Length = 131
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 12/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHE 59
I +++S NIA A+TP Y+AK + F L + ++RT
Sbjct: 7 NALGIHQHTVGVRERNAEVLSTNIAQANTPGYKAKGL-DFNKSLQAASSGASIGLSRTDG 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + P TG GNTV + E + ++ + +
Sbjct: 66 RHISASTTVNGETK---YRIPTQPDTG---DGNTVDLDLERNLFMQNQIRHQASLDFLGS 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLTKAIKG 130
>gi|225569981|ref|ZP_03779006.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM
15053]
gi|225161451|gb|EEG74070.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM
15053]
Length = 136
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + ++L +Q + S NIAN TP Y++K ++ FE + A T ++
Sbjct: 15 NTIGMMEKSLDFLWTKQGVTSNNIANVDTPGYKSKYVT-FEETFQRRLA-AATKAGDGRQ 72
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ +A V E P + ++ GN V E+ + Y+ + + +
Sbjct: 73 VRQAIAGASAVVNETPGETA---RLDGNNVNADAEMVELTRTALQYQYGINSVNSDITRL 129
Query: 125 MHVVRG 130
V++G
Sbjct: 130 RTVIKG 135
>gi|293115684|ref|ZP_05792627.2| flagellar basal-body rod protein FlgB [Butyrivibrio crossotus DSM
2876]
gi|292808800|gb|EFF68005.1| flagellar basal-body rod protein FlgB [Butyrivibrio crossotus DSM
2876]
Length = 150
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + A++ R ++++ N++N TP Y+ +++ SFE++L+ A + +L ++
Sbjct: 28 DLLTSAADYSWRRSEVLNNNMSNVDTPGYKRQEL-SFESVLSDAVERAGSSSRNLTQTVR 86
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ D ++ GN V I E + + Y I + S +
Sbjct: 87 NIDFNCVRPTIYTDDANLSYRLDGNNVDIDTEQVELASNQLYYNGVIDGINQNFSRIRTA 146
Query: 128 VR 129
+
Sbjct: 147 LT 148
>gi|320354314|ref|YP_004195653.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus
DSM 2032]
gi|320122816|gb|ADW18362.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus
DSM 2032]
Length = 137
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QN 51
M I F + + + ++ Q+++ NIANA TP Y A+ SFE L Q
Sbjct: 1 MSGIQQFDPTMKLLHKVLDLRAKNQEVIGSNIANAETPGYSAQAF-SFEDQLKSAMTGQG 59
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
T H+ + SS V TTG+ N+V + E+ K + LYE
Sbjct: 60 LHPVATRPDHIPLAPSSLEQVAGTVSRK--RDTTGIG-DENSVSVDQEMIKLSQNEILYE 116
Query: 112 LNTKLIKKLNSMVMHVVRG 130
++KK S++ + + G
Sbjct: 117 AAAAMLKKKLSLLKYAING 135
>gi|163803166|ref|ZP_02197049.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
gi|159173066|gb|EDP57899.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
Length = 120
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + N+ +R K+++ N+AN TP Y AKD+ SF T+++Q
Sbjct: 7 NALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMDQV------------S 53
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ S +EA GNTV + E K ++ + I S +
Sbjct: 54 ASSVNEPVPKFRVEAQYSMPYQNSKDGNTVELGVEQAKFTQNNMDFQTSLTFINMKFSGL 113
Query: 125 MHVVRG 130
+ G
Sbjct: 114 AKAIEG 119
>gi|295678061|ref|YP_003606585.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
gi|295437904|gb|ADG17074.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
Length = 166
Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 33/155 (21%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---------------- 50
F Q + + RQ+++S NIANA TP Y+A+DI F + L
Sbjct: 9 FAFGRQAMDVRAYRQELLSSNIANADTPGYKARDI-DFASSLAGALKKTGGSTAGQGASN 67
Query: 51 --------------NFLMARTHETHLKESD--SSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
M T H+ S+ + GNTV
Sbjct: 68 NSTLAMAQPAGVTSGMSMNTTETGHMSGKARLSATGGSPDDYGNLQYRMPLQPALDGNTV 127
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ E + ++ ++ ++ +
Sbjct: 128 DVDVERVQFADNTVHFQSGMTVVSNQIKTMLSAIT 162
>gi|262404543|ref|ZP_06081098.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC586]
gi|262349575|gb|EEY98713.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC586]
Length = 131
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETH 61
I ++++ NIA A+TP ++AK + F+ L + ++RT H
Sbjct: 9 LGIHQYTVGVREHNSEVIATNIAQANTPGFKAKGM-DFQKALQAASSGASISLSRTDGRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + + P TG GNTV + E + ++ + +
Sbjct: 68 IPASSTVSGEI---LYRTPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFLGSKF 121
Query: 122 SMVMHVVRG 130
+ ++G
Sbjct: 122 KNLTKAIKG 130
>gi|168698713|ref|ZP_02730990.1| flagellar basal-body rod protein FlgB [Gemmata obscuriglobus UQM
2246]
Length = 116
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 16/127 (12%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + +Q + R +++++N+AN +TP Y+ +++ FE L +
Sbjct: 5 LPGLSVLTQLLDASGLRHRVIAQNVANVNTPGYKRLEVA-FEADLAKALA---------- 53
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + G V+ +V GN V I E+ LY+ T++I
Sbjct: 54 -SPTGGTPVKPRVVTG----DGPERVDGNNVDIDAEMNALAKNALLYQAATQIIASRVGT 108
Query: 124 VMHVVRG 130
+ + G
Sbjct: 109 LRSAISG 115
>gi|260772271|ref|ZP_05881187.1| flagellar basal-body rod protein FlgB [Vibrio metschnikovii CIP
69.14]
gi|260611410|gb|EEX36613.1| flagellar basal-body rod protein FlgB [Vibrio metschnikovii CIP
69.14]
Length = 131
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 16/131 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + ++++ NIA ++TP ++AK + F+ L A + + S
Sbjct: 9 LGIHQHTVGVRARNAEVIATNIAQSNTPGFKAKGM-DFDRALK-----AASSGASISLSR 62
Query: 67 SSGLHWNAH-------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ G H A + P TG GNTV + E + ++ + + +
Sbjct: 63 TDGRHIPASKTVTGEMLYRIPTQPDTG---DGNTVDVDLERNLFMENQLRHQASLEFLGS 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLSKAIKG 130
>gi|152983100|ref|YP_001353453.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
Marseille]
gi|151283177|gb|ABR91587.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
Marseille]
Length = 141
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
S+R ++V+ NIANA TPNY+A+DI F+T LN+ +A + K + N
Sbjct: 27 RLFSKRLEVVASNIANADTPNYKARDI-DFKTALNR--ALAAPDKIVPKGTLPQSSAVND 83
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + V GNTV + E YE
Sbjct: 84 VLPKLLYRTPYQQSVDGNTVELDTERAVFTTTAIRYEFA 122
>gi|255021351|ref|ZP_05293399.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
ATCC 51756]
gi|254969214|gb|EET26728.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
ATCC 51756]
Length = 137
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 10/132 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------NQNFLMARTH 58
+ RQ++++ NIANA+TPNYRA DI F L + L +T
Sbjct: 7 QTLDPLADALKVSGYRQQLLAANIANANTPNYRAVDI-PFAKTLAAVQRGAEGSLPMKTD 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
T + G + A V + V + GN+V + E Y+ + +
Sbjct: 66 STRQFSGIAPGQNLAAFV---QYQRGNAVGLDGNSVDMDREQASFLKNSIGYQADVTFLT 122
Query: 119 KLNSMVMHVVRG 130
++ + G
Sbjct: 123 GKIKTLLSAITG 134
>gi|94500238|ref|ZP_01306771.1| flagellar basal body rod protein [Oceanobacter sp. RED65]
gi|94427537|gb|EAT12514.1| flagellar basal body rod protein [Oceanobacter sp. RED65]
Length = 131
Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 16/137 (11%)
Query: 1 MQPITF---FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNF 52
M I+F I + + R +I++ N+ANA TP+Y+A+DI F +L+ ++
Sbjct: 1 MSSISFDNALNIYPKTTQLRAARAEILANNLANADTPHYKARDI-DFNAMLDGAMSSRSI 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
M +TH+ H+ + S + GNTV E Y +
Sbjct: 60 GMEKTHKAHISGNQSVDDSLK-------YRNPYQPAIDGNTVDTQMEQSFYTENALRYNV 112
Query: 113 NTKLIKKLNSMVMHVVR 129
+ + + + + ++
Sbjct: 113 SFEFLNSGFKGMKNALK 129
>gi|56964037|ref|YP_175768.1| flagellar basal body rod protein FlgB [Bacillus clausii KSM-K16]
gi|56910280|dbj|BAD64807.1| flagellar basal-body rod protein FlgB [Bacillus clausii KSM-K16]
Length = 131
Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 9/125 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ + S +QK +S N+AN TPN++ K + SF+ +L HL+ +
Sbjct: 10 LEEGIRYSSTKQKAISTNLANVDTPNFKEKTV-SFDQVLQAVGE----KTGHLQAKRTDE 64
Query: 70 LHW----NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H + + + ++ +GN+V + ++ + + Y I +
Sbjct: 65 RHLSFPLPGNGVVSLREKGELYNHNGNSVDVDKQMTEMAKNQLYYNALVDRISGSFQSLE 124
Query: 126 HVVRG 130
++G
Sbjct: 125 TAIKG 129
>gi|323498423|ref|ZP_08103419.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM
21326]
gi|323316496|gb|EGA69511.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM
21326]
Length = 131
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 10/130 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y++K + F+ L A T E +
Sbjct: 7 NALGIHQHTVGLRERNAEVISTNIAQANTPGYKSKGM-DFQKALQ-----AATSEASIGL 60
Query: 65 SDSSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
S + G H A E + GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIPASTRVTGEVMYRLPSQPDTGDGNTVDVDLERNLFMQNQIRHQASLDFLGSK 120
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 121 FKNLTKALKG 130
>gi|116619478|ref|YP_821634.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter
usitatus Ellin6076]
gi|116222640|gb|ABJ81349.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter
usitatus Ellin6076]
Length = 136
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
++ + LS RQK+V+ NIANA TP Y +D+ F+ L ++SG
Sbjct: 35 LERYMDLLSARQKLVASNIANADTPGYLTQDL-DFQAELR----------------NASG 77
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ ++ GN V + E +++ ++L+K V ++
Sbjct: 78 RMPQVSGVAG-----LKIKNDGNDVSLDRESRLLAENALRFQVASQLMKSQIRAVRSAIQ 132
>gi|291288219|ref|YP_003505035.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
DSM 12809]
gi|290885379|gb|ADD69079.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
DSM 12809]
Length = 136
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETH 61
+ S + +++ENIAN TP Y+A+D+ F +++ + + RT+E H
Sbjct: 11 DTLATGLRTASVKNGVIAENIANKDTPGYKAQDLE-FYDVMDEVLGTGKKLPLTRTNEKH 69
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L + G+ ++ V + V+ GN V + E+ + Y + +
Sbjct: 70 LPPA-GRGVDPSSFVYQ---QNNPSVRNDGNDVNVDYEMTQMAENTIRYNMMADMTAGKF 125
Query: 122 SMVMHVVRG 130
+ + +++ G
Sbjct: 126 TKLKNIIAG 134
>gi|258621046|ref|ZP_05716080.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
gi|258625274|ref|ZP_05720182.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
gi|262170822|ref|ZP_06038500.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
gi|258582447|gb|EEW07288.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
gi|258586434|gb|EEW11149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
gi|261891898|gb|EEY37884.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
Length = 131
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHE 59
I ++++ NIA A+TP ++AK + F+ L + ++RT
Sbjct: 7 NALGIHQHTVGVRERNSEVIATNIAQANTPGFKAKGM-DFQKALQAASSGASISLSRTDG 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + + P TG GNTV + E + ++ + +
Sbjct: 66 RHIPASSTVTGEI---LYRTPTQPDTG---DGNTVDVDLERNMFMQNQIRHQASLDFLGG 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLTKAIKG 130
>gi|254437531|ref|ZP_05051025.1| flagellar basal-body rod protein FlgB [Octadecabacter antarcticus
307]
gi|198252977|gb|EDY77291.1| flagellar basal-body rod protein FlgB [Octadecabacter antarcticus
307]
Length = 105
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFL---MARTHETHLKESDSSGLHWNAHVIEAP 80
++ NIANA+TPN++A+D+ FE + + + +T H+ G
Sbjct: 2 LASNIANAATPNFKARDL-DFEQEMARQVGDSPLRKTSARHMDSLAGLGGSG------VQ 54
Query: 81 LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
Q + GNTV I+ E + Y + + S ++ ++G
Sbjct: 55 FRQPLNPSLDGNTVEISVEQMEFSENSLGYMTTLTFLNRRISGLLTAIKG 104
>gi|89072318|ref|ZP_01158897.1| LfgB [Photobacterium sp. SKA34]
gi|89051850|gb|EAR57302.1| LfgB [Photobacterium sp. SKA34]
Length = 120
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ Q ++ +R K+++ N+AN TP Y AKDI F+ I +Q +
Sbjct: 7 NALGVHPQTLDFRVQRAKVLASNLANVDTPGYLAKDIR-FDAIASQIGVGKV-------- 57
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
V+ GNTV ++ E K ++ + + +
Sbjct: 58 ----QKAPTQLVVSDGYAVPYQNSKDGNTVELSVEQAKFTKNNMDFQSSLTFMNMKFKGL 113
Query: 125 MHVVRG 130
V++G
Sbjct: 114 AAVIKG 119
>gi|90577341|ref|ZP_01233152.1| flagellar basal body rod protein [Vibrio angustum S14]
gi|90440427|gb|EAS65607.1| flagellar basal body rod protein [Vibrio angustum S14]
Length = 120
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ Q ++ +R K+++ N+AN TP Y AKDI F+ I++Q +
Sbjct: 7 NALGVHPQTLDFRVQRAKVLASNLANVDTPGYLAKDIR-FDAIVSQIEVGKV-------- 57
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
V+ GNTV ++ E K ++ + + +
Sbjct: 58 ----QKSPTQLVVSDGYAVPYQNSKDGNTVELSVEQAKFTKNNMDFQSSLTFMNMKFKGL 113
Query: 125 MHVVRG 130
V++G
Sbjct: 114 AAVIKG 119
>gi|254463526|ref|ZP_05076942.1| flagellar basal-body rod protein FlgB [Rhodobacterales bacterium
HTCC2083]
gi|206680115|gb|EDZ44602.1| flagellar basal-body rod protein FlgB [Rhodobacteraceae bacterium
HTCC2083]
Length = 128
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + S R +++ NIANA+TP Y+A+D+ F+ ++ +
Sbjct: 9 SFQASALSLRSARNNMLASNIANAATPGYKARDM-DFDREMS---ARIGDSPVRMSAPRH 64
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
Q + GNTV ++ E + Y + + K + +M
Sbjct: 65 VNNLTGVGADRVQYRQPLNPSLDGNTVEMSVEQIEFSENSVRYMSTLEFLNKRVAGLMSA 124
Query: 128 VRG 130
+RG
Sbjct: 125 IRG 127
>gi|323495380|ref|ZP_08100457.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
gi|323310303|gb|EGA63490.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
Length = 131
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 16/133 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y++K + F+ L A T E +
Sbjct: 7 NALGIHQHTVGVRERNAEVISTNIAQANTPGYKSKGM-DFQKALQ-----AATSEASIGL 60
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S + G H A P TG GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIPASTQVTGEVMYRLPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFL 117
Query: 118 KKLNSMVMHVVRG 130
+ ++G
Sbjct: 118 GSKFKNLTKAIKG 130
>gi|229918624|ref|YP_002887270.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
gi|229470053|gb|ACQ71825.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
Length = 122
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+Q+ Q N QK++S N++N TPN++AK + FE L + ++
Sbjct: 8 YQLLKQAVNHAVLNQKVISHNLSNIDTPNFKAKQ-AVFEQTLQ----------SEMRLKL 56
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
G ++ + ++ GN V + E+ + + YE + + + +
Sbjct: 57 QGGRPSDSTQSKVIDRAGGAMRSDGNNVDLDYEMSELARNQLQYEAMMEQLNRRLGGLKS 116
Query: 127 VVRG 130
V+RG
Sbjct: 117 VIRG 120
>gi|251772447|gb|EES53014.1| flagellar basal-body rod protein FlgB [Leptospirillum
ferrodiazotrophum]
Length = 124
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 17/134 (12%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
M + F + + S R ++ NIAN TP Y+A+DI SF+ L +
Sbjct: 1 MSQVHLFDRTTDLLKVTMDIRSRRHLLLVGNIANQDTPGYQARDI-SFKDELARA----- 54
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
LK L V+ D+T G + NTV I E+ K Y +
Sbjct: 55 -----LKAPSRDRLDRTEGVLTVNTDETVGNDL--NTVNIELEMQKLASNTGNYNAVASM 107
Query: 117 IKKLNSMVMHVVRG 130
+ M+ + G
Sbjct: 108 VGWKYRMMGDSISG 121
>gi|220924393|ref|YP_002499695.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
2060]
gi|219949000|gb|ACL59392.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
2060]
Length = 119
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
M + +A + A LS RQ V+ NIANA TP YRA+D+ F I
Sbjct: 1 MSGVYLIDLALREAQHLSARQATVAGNIANADTPGYRARDVVPFRPI 47
>gi|257866375|ref|ZP_05646028.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
EC30]
gi|257873109|ref|ZP_05652762.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
EC10]
gi|257875988|ref|ZP_05655641.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
EC20]
gi|257800333|gb|EEV29361.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
EC30]
gi|257807273|gb|EEV36095.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
EC10]
gi|257810154|gb|EEV38974.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
EC20]
Length = 120
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + + N ++R +++S NIAN +T Y+AK I FE+ L Q + T
Sbjct: 2 LDTYDLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIV-FESELKQALASSGTD----A 56
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+++S + E + TT ++ +GN V + E+ Y T + M
Sbjct: 57 ATEASVSQVKPKITE---NATTSIKDNGNNVDLEVEMLDQAANGLYYSALTAQVNGRLQM 113
Query: 124 VMHVV 128
+ V+
Sbjct: 114 MNLVL 118
>gi|124516314|gb|EAY57822.1| putative flagellar basal-body rod protein FlgB [Leptospirillum
rubarum]
Length = 124
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 17/134 (12%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
M + F + + + S R ++ N+AN TP Y+A+D+ SF+ L +
Sbjct: 1 MAHVHLFDRTIDLLGKDLDIRSRRHLLLVSNVANQDTPGYQARDL-SFKGELAKALQ--- 56
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
S + L+ V NTV I E+ K Y +
Sbjct: 57 ---------KDSREDLDRVEGSLVLNPDETVGNDLNTVNIEMEMEKIASNTGNYNAAASM 107
Query: 117 IKKLNSMVMHVVRG 130
+ M+ +RG
Sbjct: 108 VAWKYRMMGDAIRG 121
>gi|56130699|ref|YP_145602.1| putative flagellar basal-body rod protein [Ralstonia metallidurans
CH34]
gi|94152373|ref|YP_581780.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|187928838|ref|YP_001899325.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
gi|56068689|emb|CAI11251.1| putative flagellar basal-body rod protein [Cupriavidus
metallidurans CH34]
gi|93358743|gb|ABF12830.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans
CH34]
gi|187725728|gb|ACD26893.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
Length = 140
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHET 60
+ Q + R +++S NIANA TPNY+A+DI F L++ M T
Sbjct: 15 SVHEQALRLRTRRFELLSANIANADTPNYKARDI-DFSAELDRVMGSGQNFAGMTMTSPR 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
H++ S + + + + GNTV + E + +
Sbjct: 74 HIEASKPALEEDLMYRV------PLQSSMDGNTVEMDVERVAFAENALRMRFSIQ 122
>gi|77359719|ref|YP_339294.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas haloplanktis TAC125]
gi|76874630|emb|CAI85851.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas haloplanktis TAC125]
Length = 111
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
Query: 24 VSENIANASTPNYRAKDISSFETIL-------NQNFLMARTHETHLKESDSSGLHWNAHV 76
++ NIANA TP Y+AKDI F + L M RT+ H+ S + +
Sbjct: 2 LATNIANADTPGYKAKDI-DFASALKTAKSHQQGGNSMVRTNSKHIAG--GSKEVGGSEM 58
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
TG GN+V I E Y+ + + + + +
Sbjct: 59 FRNANQPDTG---DGNSVDIQVERNLYAQNAMEYQASLQFLSGRFKGLKKAL 107
>gi|261211325|ref|ZP_05925613.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC341]
gi|260839280|gb|EEX65906.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC341]
Length = 131
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHE 59
I ++++ NIA A+TP ++AK + F+ L + ++RT
Sbjct: 7 NALGIHQHTVGVRERNSEVIATNIAQANTPGFKAKGM-DFQKALQAASSGASISLSRTDG 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + + P TG GNTV + E + ++ + +
Sbjct: 66 RHIPASSTVTGEI---LYRTPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFLGG 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNLTKAIKG 130
>gi|330720176|gb|EGG98565.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
IMCC2047]
Length = 108
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 24 VSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHLKESDSSGLHWNAHVIE 78
++ NIANA TP Y+++D+ F+ +L +Q + RT+ H +++
Sbjct: 2 LANNIANADTPGYQSRDM-DFKALLMQAKSDQGVNLKRTNSRHFSTANAMETGAGLQYRT 60
Query: 79 APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
V GNTV + E + ++ + + + + +M ++G
Sbjct: 61 -----PMQPSVDGNTVDLQMEQAEYAENALAFQTSFTFLNRKFTGLMKAIKG 107
>gi|91794998|ref|YP_564649.1| flagellar basal body rod protein FlgB [Shewanella denitrificans
OS217]
gi|91717000|gb|ABE56926.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans
OS217]
Length = 116
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ ER KI++ N+ NA TP Y+AKD+ F ++ Q
Sbjct: 9 LGVHPLALDFRVERSKILAGNLVNAETPGYQAKDL-DFSVLMAQ---------------- 51
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ E GNTV + E + Y+ + + + +
Sbjct: 52 LDAGIKPGNGYEPSYRIPYQNTADGNTVEMGKEQARYSENAMDYQTSLTFLNMKIAGLKS 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|254227980|ref|ZP_04921410.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|262396038|ref|YP_003287891.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|151939476|gb|EDN58304.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
gi|262339632|gb|ACY53426.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
Length = 120
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 7 NALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQVAAGGVNKP----- 60
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
++A GNTV + E K ++ + + + +
Sbjct: 61 -------VPKFQVQAQYSVPYQNSKDGNTVELGVEQAKFTQNNMDFQTSLTFLNMKFNGL 113
Query: 125 MHVVRG 130
+ G
Sbjct: 114 TKAIEG 119
>gi|269836576|ref|YP_003318804.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus
DSM 20745]
gi|269785839|gb|ACZ37982.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus
DSM 20745]
Length = 138
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMA 55
I + +Q + L+ RQ++ + N+ANA TP ++A ++ FE L Q N ++
Sbjct: 6 IDPTRFLAQALDGLALRQRVTANNVANADTPRFKASRVT-FEETLRQRLHDEPGGNLILV 64
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
RTH +HL + +A + T ++ GN V I ++ Y ++
Sbjct: 65 RTHASHLPLNAGD----DASPARIVEMRGTTMRNDGNNVDIEQQMGILAETTMRYSAVSE 120
Query: 116 LIKKLNSMVMHVV 128
+ + +++ +
Sbjct: 121 ALARKLAIMRTIA 133
>gi|303326603|ref|ZP_07357045.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3]
gi|302862591|gb|EFL85523.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3]
Length = 137
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+ S+ + +RQ +++ N+AN TPNY+ ++++ FE L M+ T E H
Sbjct: 10 GLVSRVMDMQLQRQNVITSNLANVETPNYKPRELA-FEKELQSALGLDMKGRMSATSEGH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + + + Q G V + E+ K + Y T+++ K
Sbjct: 69 MPAAFNPDNFGPEWSKQFKPRQIHGEDR----VSLDKEMAKHAKNQLQYTALTQIMSKTF 124
Query: 122 SMVMHVVR 129
+ +++
Sbjct: 125 EGMSTIIQ 132
>gi|299534790|ref|ZP_07048120.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis
ZC1]
gi|298729878|gb|EFI70423.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis
ZC1]
Length = 130
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
++ + K ++ NIAN TPNY+AK++ SF+ +L + +A + +
Sbjct: 11 LENGLSYATLNHKTIANNIANVDTPNYKAKNV-SFKDMLEEQKSIA------ISAYRTDN 63
Query: 70 LHWNAHVIEAPLD----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H++ +A + + +GN V + E K + Y + + +
Sbjct: 64 RHYDFTFRQATPGVNIVENLRYRNNGNAVDMDAEQAKLAENQIYYNALIDRVNGKLNTLN 123
Query: 126 HVVRG 130
V++G
Sbjct: 124 TVIKG 128
>gi|119953093|ref|YP_945302.1| flagellar basal body rod protein FlgB [Borrelia turicatae 91E135]
gi|119861864|gb|AAX17632.1| flagellar basal-body rod protein FlgB [Borrelia turicatae 91E135]
Length = 137
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHE 59
+A ++ + LS RQ ++++N+AN TPN++ ++ FE+ L + + + R +
Sbjct: 11 DLAHRYLDVLSLRQSVIADNVANVDTPNFKRSKVT-FESELERAIFNEGASSLSLRRGNG 69
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
HL G + + LD + + +GN V I +E+ + +Y L T +
Sbjct: 70 KHLDGFKELG-YLDVKPRRM-LDYLSTLNNNGNNVDIDSEMKNLAQNQMMYSLFTNI 124
>gi|297580846|ref|ZP_06942771.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC385]
gi|297534672|gb|EFH73508.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC385]
Length = 131
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETH 61
I ++++ NIA A+TP ++AK + F+ L + ++RT H
Sbjct: 9 LGIHQHTVGVRERNSEVIATNIAQANTPGFKAKGM-DFQKALQAASSGASISLSRTDSRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + + P+ TG GNTV + E + ++ + +
Sbjct: 68 IPASSTVSGEI---LYRVPIQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFLGSKF 121
Query: 122 SMVMHVVRG 130
+ ++G
Sbjct: 122 KNLTKSLKG 130
>gi|187918168|ref|YP_001883731.1| flagellar basal body rod protein FlgB [Borrelia hermsii DAH]
gi|119861016|gb|AAX16811.1| flagellar basal-body rod protein FlgB [Borrelia hermsii DAH]
Length = 135
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+A ++ + LS RQ ++++NIAN TPN++ ++ FE L + L R ++L
Sbjct: 9 DLAHRYLDVLSLRQSVIADNIANVDTPNFKRSKVT-FEAELERAILNERA--SNLSLIRG 65
Query: 68 SGLHWNAH--------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ H N LD + ++ GN V I +E+ + +Y L T +
Sbjct: 66 NDKHLNGFKELGYLDVKPSRMLDYLSILKNDGNNVDIDSEMKNLIQNQMIYSLFTNI 122
>gi|296133052|ref|YP_003640299.1| flagellar basal-body rod protein FlgB [Thermincola sp. JR]
gi|296031630|gb|ADG82398.1| flagellar basal-body rod protein FlgB [Thermincola potens JR]
Length = 138
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 10/129 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETH 61
+ + + S R + ++ N+AN TP Y+ D++ FE L + + H
Sbjct: 12 GLLQRALDAASMRNEAIANNMANVDTPGYKRVDVA-FEEELKKAMAANGRLQGLTSDPRH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + N + D T ++ N V I E + +YE I
Sbjct: 71 IPIGGKKPIEINPRFVR---DTDTTMRNDDNNVDIDKETAALAKNQIMYEFLINGINGDF 127
Query: 122 SMVMHVVRG 130
+ + G
Sbjct: 128 KKLRMAING 136
>gi|94968683|ref|YP_590731.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter
versatilis Ellin345]
gi|94550733|gb|ABF40657.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter
versatilis Ellin345]
Length = 118
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 15/124 (12%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+A + + + RQ++++ N+AN TP Y +DI F L Q + ++
Sbjct: 8 LLNVAERALDVSAARQRVIANNMANVDTPGYHTRDI-DFAGQLRQMLG----EASGGSQT 62
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ + V GN V + E H + + ++I+ +
Sbjct: 63 TLASRNVPGLVER----------PDGNNVNVERESLLMAHTQLEFNTAIQVIRSEFKRIQ 112
Query: 126 HVVR 129
++
Sbjct: 113 MAIQ 116
>gi|328958287|ref|YP_004375673.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
gi|328674611|gb|AEB30657.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
Length = 142
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMART 57
M F + + S RQ+++S NIAN +T +Y+ + FE+IL + M +T
Sbjct: 16 MMSDPTFNLMKNALDAASMRQEMISSNIANVNTADYKVNKVE-FESILENVSNGTAMNKT 74
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
++ H+ + N T V+ +GN V I E+ + Y +
Sbjct: 75 NDLHIGFGN-----LNEVTPVVSKRTDTSVKENGNNVDIDIEMAEEASNSIYYNSLVTQL 129
Query: 118 KKLNSMVMHVVR 129
SM+ V+
Sbjct: 130 NAKYSMLRSVIT 141
>gi|157373210|ref|YP_001471810.1| flagellar basal body rod protein FlgB [Shewanella sediminis
HAW-EB3]
gi|157315584|gb|ABV34682.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
HAW-EB3]
Length = 116
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q ++ ER KI++ N+ANA TP Y+AKD+ +F+ ++ S
Sbjct: 9 LGIHPQTLDFRVERTKILAGNLANAETPGYKAKDL-NFQALM----------------SG 51
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ ++ E NTV + E + Y+ + + S +
Sbjct: 52 INAGMPASNQYEVGYRVPYQTSADQNTVELGKEQARYSQNAMDYQTSLTFLNMKISGLKS 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|78224307|ref|YP_386054.1| flagellar basal-body rod protein FlgB [Geobacter metallireducens
GS-15]
gi|78195562|gb|ABB33329.1| Flagellar basal-body rod protein FlgB [Geobacter metallireducens
GS-15]
Length = 140
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR------THETH 61
+ ++ + S ++S N+AN TPNY + SFE L + TH H
Sbjct: 12 DLLAKSIDLRSRSHTMISANLANVETPNYTPTAL-SFENELKGALKGKKVGTPAITHPKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + N V + E+ + + +Y + +++ K
Sbjct: 71 IPLKGQSNSIQQVQGT-VIDTSSLSPGKDYNGVDLETEMSRMAENQIMYNASIQILSKQF 129
Query: 122 SMVMHVVR 129
+ + +R
Sbjct: 130 NEIKSAIR 137
>gi|330447900|ref|ZP_08311548.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492091|dbj|GAA06045.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 120
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 13/124 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ++ +R K+++ N+AN TP Y AKDI F+ I NQ L T
Sbjct: 9 LGVHPQTLDFRVQRAKVLASNLANVDTPGYLAKDIR-FDAIANQMDLGKVQKAT------ 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ V+ GNTV ++ E K ++ + + +
Sbjct: 62 ------SQLVVSDGYSVPYQNSKDGNTVELSVEQAKFTKNNMDFQSSLTFMNMKFRGLAE 115
Query: 127 VVRG 130
V++G
Sbjct: 116 VIKG 119
>gi|146305247|ref|YP_001185712.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp]
gi|145573448|gb|ABP82980.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp]
Length = 117
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 16/126 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ S+ +R +I++ N+AN TP + A+DI F + + R
Sbjct: 7 DVVGLHSRALELRMQRSEILAANLANEDTPGFLARDI-DFAGEMQRLDPQQR-------- 57
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ A E T GN+V ++ E ++ + + +
Sbjct: 58 -------FAASSAELKYRVPTQPSQDGNSVELSVEQAAFSKNAMDFQTSLTFLSMKFRGL 110
Query: 125 MHVVRG 130
+ G
Sbjct: 111 KQAIEG 116
>gi|163789653|ref|ZP_02184091.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7]
gi|159875185|gb|EDP69251.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7]
Length = 125
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 11/132 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMART 57
M P + + + S RQ+++S NIAN +T Y+ + FE+IL+ + M +T
Sbjct: 1 MDP--TYNLMKNALDAASMRQEMISSNIANVNTDGYKVNKVE-FESILDNVSKGTTMNKT 57
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ H+ + N T V+ +GN V I E+ + Y +
Sbjct: 58 SDLHIGF-----ENLNEVTPVVSKRTNTSVKENGNNVDIDIEMAEEASNSIYYNGLVTQL 112
Query: 118 KKLNSMVMHVVR 129
+M+ V+
Sbjct: 113 NAKYAMLRSVIT 124
>gi|153213631|ref|ZP_01948904.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 1587]
gi|153825327|ref|ZP_01977994.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-2]
gi|153829345|ref|ZP_01982012.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 623-39]
gi|229513844|ref|ZP_04403306.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TMA 21]
gi|229522149|ref|ZP_04411566.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TM 11079-80]
gi|229524195|ref|ZP_04413600.1| flagellar basal-body rod protein FlgB [Vibrio cholerae bv. albensis
VL426]
gi|229528795|ref|ZP_04418185.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 12129(1)]
gi|254286491|ref|ZP_04961448.1| flagellar basal-body rod protein FlgB [Vibrio cholerae AM-19226]
gi|262191692|ref|ZP_06049868.1| flagellar basal-body rod protein FlgB [Vibrio cholerae CT 5369-93]
gi|124115830|gb|EAY34650.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 1587]
gi|148875186|gb|EDL73321.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 623-39]
gi|149741011|gb|EDM55080.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-2]
gi|150423440|gb|EDN15384.1| flagellar basal-body rod protein FlgB [Vibrio cholerae AM-19226]
gi|229332569|gb|EEN98055.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 12129(1)]
gi|229337776|gb|EEO02793.1| flagellar basal-body rod protein FlgB [Vibrio cholerae bv. albensis
VL426]
gi|229341074|gb|EEO06079.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TM 11079-80]
gi|229349025|gb|EEO13982.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TMA 21]
gi|262032431|gb|EEY50993.1| flagellar basal-body rod protein FlgB [Vibrio cholerae CT 5369-93]
gi|327484719|gb|AEA79126.1| Flagellar basal-body rod protein FlgB [Vibrio cholerae LMA3894-4]
Length = 131
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETH 61
I ++++ NIA A+TP ++AK + F+ L + ++RT H
Sbjct: 9 LGIHQHTVGVRERNSEVIATNIAQANTPGFKAKGM-DFQKALQAASSGASISLSRTDSRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + + P TG GNTV + E + ++ + +
Sbjct: 68 IPASSTVSGEI---LYRVPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFLGSKF 121
Query: 122 SMVMHVVRG 130
+ ++G
Sbjct: 122 KNLTKSLKG 130
>gi|153831645|ref|ZP_01984312.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
gi|156976138|ref|YP_001447044.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC
BAA-1116]
gi|269960113|ref|ZP_06174489.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
gi|148872155|gb|EDL70972.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
gi|156527732|gb|ABU72817.1| hypothetical protein VIBHAR_04909 [Vibrio harveyi ATCC BAA-1116]
gi|269835084|gb|EEZ89167.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
Length = 120
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 7 NALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ------------MS 53
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ S +EA GNTV + E K ++ + + S +
Sbjct: 54 AGSVNKPVPKFQVEAQYSVPYQNSKDGNTVELGVEQAKFTQNNMDFQTSLTFLNMKFSGL 113
Query: 125 MHVVRG 130
V+ G
Sbjct: 114 AKVIEG 119
>gi|78355403|ref|YP_386852.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217808|gb|ABB37157.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 155
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTHETH 61
++ ++ + +RQ ++ N+AN TP Y+A+++ FE L + ARTHE H
Sbjct: 29 EVTAKVMDMQLKRQNVIMSNMANVRTPGYKAREL-DFEKDLQAALSLGTEGKIARTHEKH 87
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + G V + E+ K Y + +IK
Sbjct: 88 VPATFDPETFGPEWTKAFRPRVVHGEDQ----VDLDKEMAKMAKNTLQYNTLSTIIKGNF 143
Query: 122 SMVMHVV 128
+ V+
Sbjct: 144 QGLKDVI 150
>gi|326386927|ref|ZP_08208541.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326208607|gb|EGD59410.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 118
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ F I ++R +++ NIANA+TP Y+A+DI F + L ++ ++ +
Sbjct: 7 SLFGIHGMALELRAQRLGLLTSNIANAATPGYKARDI-DFASAL-KSMTQGASNSQAISS 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S + GNTV ++ E YE +I+ V
Sbjct: 65 STL-------------YRVPVMPSLDGNTVELSTEQTAFAENAVGYEATLNMIQDRVGEV 111
Query: 125 MHVVRG 130
++G
Sbjct: 112 TRALKG 117
>gi|157362948|ref|YP_001469715.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
gi|157313552|gb|ABV32651.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
Length = 125
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--MARTHETHLKE 64
FQI + RQ I ++NIANA TP Y+ K + FE +LNQ M T E H++
Sbjct: 6 FQIIKTAMDVAILRQNIFAQNIANAETPGYKRKYVV-FEELLNQAMSMKMKTTDENHIQT 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S A + +++ + N V + E+ + YE+ ++L+ K
Sbjct: 65 EKS------AVKPQIKEEESFFYRNDENGVDLEIEIAQMTANGLKYEVLSRLMSKNIEYY 118
Query: 125 MHVVR 129
V+R
Sbjct: 119 NTVLR 123
>gi|257141419|ref|ZP_05589681.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
E264]
Length = 109
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 10/117 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ER KI++ N+AN TP Y+A+D+ F+ L +
Sbjct: 1 MKLRAERTKIIASNLANLDTPGYQAQDL-DFKRSLAEAAGGGAGARLG---------DAP 50
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
A + GNTV + E ++++ + + + G
Sbjct: 51 AGGVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAIDFQMSLTFLNAKIKGLQTAITG 107
>gi|15606428|ref|NP_213808.1| flagellar basal body rod protein FlgB [Aquifex aeolicus VF5]
gi|6225341|sp|O67244|FLGB_AQUAE RecName: Full=Flagellar basal-body rod protein flgB
gi|2983626|gb|AAC07194.1| flagellar basal body rod protein FlgB [Aquifex aeolicus VF5]
Length = 124
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ F+ + ++ N+ +R K++ N+ANA TPNY+ +D+ F + + TH
Sbjct: 1 MDLFRGVNLYKKYINFTWKRHKVLLGNLANADTPNYKRRDLIFF--LEPPTIPLKTTHNK 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+K + V + L N V I EL + K YE K
Sbjct: 59 HVK--NFRKFEERLVVFKNGLQGN-----DRNNVSIERELSEIVKNKLAYETYLKFAMGS 111
Query: 121 NSMVMHVVRG 130
+ + V++G
Sbjct: 112 LNTLNRVIKG 121
>gi|15644116|ref|NP_229165.1| flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
gi|148270548|ref|YP_001245008.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila RKU-1]
gi|4981924|gb|AAD36434.1|AE001790_6 flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
gi|147736092|gb|ABQ47432.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila RKU-1]
Length = 127
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F Q + RQ + S NIAN STP Y+ K ++ FE +L ++ +++T+E HL
Sbjct: 6 FYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYVA-FEELLKESEMKLKLSKTNEKHLI 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S N +D TT ++ GN V I E+ + Y++ T+L+
Sbjct: 65 GSK------NVVEPRVLVDNTTTMRNDGNNVDIDYEMVQLVKNGLRYQVLTRLMSLNIDR 118
Query: 124 VMHVVRG 130
V+RG
Sbjct: 119 YNAVLRG 125
>gi|15642199|ref|NP_231831.1| flagellar basal body rod protein FlgB [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121586275|ref|ZP_01676065.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 2740-80]
gi|121726570|ref|ZP_01679819.1| flagellar basal-body rod protein FlgB [Vibrio cholerae V52]
gi|147673875|ref|YP_001217717.1| flagellar basal body rod protein FlgB [Vibrio cholerae O395]
gi|153817081|ref|ZP_01969748.1| flagellar basal-body rod protein FlgB [Vibrio cholerae NCTC 8457]
gi|153820794|ref|ZP_01973461.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
gi|183179562|ref|ZP_02957773.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-3]
gi|227082324|ref|YP_002810875.1| flagellar basal-body rod protein FlgB [Vibrio cholerae M66-2]
gi|229507723|ref|ZP_04397228.1| flagellar basal-body rod protein FlgB [Vibrio cholerae BX 330286]
gi|229512082|ref|ZP_04401561.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
gi|229519218|ref|ZP_04408661.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC9]
gi|229607227|ref|YP_002877875.1| flagellar basal body rod protein FlgB [Vibrio cholerae MJ-1236]
gi|254849329|ref|ZP_05238679.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MO10]
gi|255747101|ref|ZP_05421046.1| flagellar basal-body rod protein FlgB [Vibrio cholera CIRS 101]
gi|262161355|ref|ZP_06030465.1| flagellar basal-body rod protein FlgB [Vibrio cholerae INDRE 91/1]
gi|262167774|ref|ZP_06035476.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC27]
gi|298500422|ref|ZP_07010227.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MAK 757]
gi|9656756|gb|AAF95345.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121549541|gb|EAX59567.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 2740-80]
gi|121631023|gb|EAX63402.1| flagellar basal-body rod protein FlgB [Vibrio cholerae V52]
gi|126512349|gb|EAZ74943.1| flagellar basal-body rod protein FlgB [Vibrio cholerae NCTC 8457]
gi|126521586|gb|EAZ78809.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
gi|146315758|gb|ABQ20297.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O395]
gi|183012973|gb|EDT88273.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-3]
gi|227010212|gb|ACP06424.1| flagellar basal-body rod protein FlgB [Vibrio cholerae M66-2]
gi|227014096|gb|ACP10306.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O395]
gi|229343907|gb|EEO08882.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC9]
gi|229352047|gb|EEO16988.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
gi|229355228|gb|EEO20149.1| flagellar basal-body rod protein FlgB [Vibrio cholerae BX 330286]
gi|229369882|gb|ACQ60305.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MJ-1236]
gi|254845034|gb|EET23448.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MO10]
gi|255735503|gb|EET90903.1| flagellar basal-body rod protein FlgB [Vibrio cholera CIRS 101]
gi|262023839|gb|EEY42538.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC27]
gi|262028666|gb|EEY47320.1| flagellar basal-body rod protein FlgB [Vibrio cholerae INDRE 91/1]
gi|297541115|gb|EFH77169.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MAK 757]
Length = 131
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETH 61
I ++++ NIA A+TP ++AK + F+ L + ++RT H
Sbjct: 9 LGIHQHTVGVRERNSEVIATNIAQANTPGFKAKGM-DFQKALQAASSGASISLSRTDSRH 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + + P TG GNTV + E + ++ + +
Sbjct: 68 IPASSTMSGEI---LYRVPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFLGSKF 121
Query: 122 SMVMHVVRG 130
+ ++G
Sbjct: 122 KNLTKSLKG 130
>gi|316936688|gb|ADU60340.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 87
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + +
Sbjct: 3 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALTL 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVS 90
+S H A + +P
Sbjct: 62 TSSHHIPAQAVSSPAVDLLYRVPD 85
>gi|167576659|ref|ZP_02369533.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
TXDOH]
Length = 109
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 10/117 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ER KI++ N+AN TP Y+A+D+ F+ L + L ++ + G+
Sbjct: 1 MKLRAERTKIIASNLANLDTPGYQAQDL-DFKRSLAEAAGGGA--GARLGDALAGGVTLG 57
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
V GNTV + E ++++ + + + G
Sbjct: 58 YRV-------PYQAAQDGNTVELGVEQAAFAQNAIDFQMSLTFLNAKIKGLQTAITG 107
>gi|322432999|ref|YP_004210248.1| flagellar basal-body rod protein FlgB [Acidobacterium sp. MP5ACTX9]
gi|321165226|gb|ADW70930.1| flagellar basal-body rod protein FlgB [Acidobacterium sp. MP5ACTX9]
Length = 117
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ ++R++ ++ N+AN TP YR KD++ + ++ + +D S
Sbjct: 11 LERFLELTTDREQTIASNMANVDTPGYRTKDVNFKQAMMTAS-----------SGADGSE 59
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ + L+ + GN V + E + Y L T+L+K ++ +
Sbjct: 60 FTPVVNKVNGLLE-----RPDGNNVNLDRESLLLAQSQLQYSLGTQLVKGQFHQLLSAIN 114
Query: 130 G 130
G
Sbjct: 115 G 115
>gi|169827117|ref|YP_001697275.1| flagellar basal body rod protein FlgB [Lysinibacillus sphaericus
C3-41]
gi|168991605|gb|ACA39145.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41]
Length = 130
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
++ + K ++ NIAN TPNY+AK++ SF+ +L + +A + +
Sbjct: 11 LENGLSYATLNHKTIANNIANVDTPNYKAKNV-SFKEMLAEQKGIA------ISAYRTDN 63
Query: 70 LHWNAHVIEAPLD----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H++ + ++ + + +GN V + E K + Y + + +
Sbjct: 64 RHYDFTIRQSTPGVNNIENLRYRNNGNAVDMDAEQAKLAENQIYYNALIDRVNGKLNTLN 123
Query: 126 HVVRG 130
V++G
Sbjct: 124 TVIKG 128
>gi|206603157|gb|EDZ39637.1| Putative flagellar basal-body rod protein FlgB [Leptospirillum sp.
Group II '5-way CG']
Length = 144
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 17/134 (12%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
M + F + + + S R ++ N+AN TP Y+A+D+ SF+ L
Sbjct: 21 MAHVHLFDRTIDLLGKDLDIRSHRHLLLVSNVANQDTPGYQARDL-SFKRQLANALQKDT 79
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
E L+ V NTV I E+ K Y +
Sbjct: 80 REALDKVEGS------------LILNPDETVGNDLNTVNIEMEMEKIASNTGNYNAAASM 127
Query: 117 IKKLNSMVMHVVRG 130
+ M+ +RG
Sbjct: 128 VAWKYRMMGDAIRG 141
>gi|149927795|ref|ZP_01916046.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
gi|149823417|gb|EDM82648.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
Length = 150
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------------- 48
Q +++ + RQ++++ NI+N TPNY+A D F++ L
Sbjct: 10 QFSAEALKLRARRQEVLTSNISNVDTPNYKAVDF-DFQSALKAATGEKGSMGSPSNPGLG 68
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
N +A TH+ H+ ++G+ + + + GN+V I E
Sbjct: 69 NGAGALAVTHQGHITGKGNAGMSTAEML---QFRRGNNAAIDGNSVDIDRERAAFAENTV 125
Query: 109 LYELNTKLIKKLNSMVMHV 127
YE + I S +
Sbjct: 126 KYEAALRSINGRISSLKQA 144
>gi|217077496|ref|YP_002335214.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
TCF52B]
gi|217037351|gb|ACJ75873.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
TCF52B]
Length = 127
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F + +RQ+I S+NIANA TPNY+ K I FE +LN++ + T H++
Sbjct: 6 FSTLKAAMDVALKRQEIHSQNIANAETPNYKRKYIV-FEELLNESKMKLSLKTTSGKHIE 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + T + GN V I E+ + Y+ ++L+
Sbjct: 65 RT------PKVVNPIIKAQKNTSLTNDGNNVDIDIEMVEMVKNALRYQTLSRLMSANIDR 118
Query: 124 VMHVVR 129
V+R
Sbjct: 119 YNTVIR 124
>gi|317133492|ref|YP_004092806.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
YUAN-3]
gi|315471471|gb|ADU28075.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
YUAN-3]
Length = 125
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
++ + L +R ++S+N+ANA TP Y+ K + SFE L+Q + +
Sbjct: 11 DAGTKAIDALWQRSNVISDNVANADTPGYQQKSV-SFEDQLSQA----------ISDGSL 59
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S ++ + ++ T N V + ++ + + Y T+ + SM+
Sbjct: 60 SAGELDSVSPQVQVESGTISSSDSNGVDMETQMVELMRNQLQYSYLTRGVSDQLSMLKTA 119
Query: 128 VRG 130
G
Sbjct: 120 ASG 122
>gi|126653752|ref|ZP_01725670.1| flagellar basal-body rod protein B [Bacillus sp. B14905]
gi|126589716|gb|EAZ83852.1| flagellar basal-body rod protein B [Bacillus sp. B14905]
Length = 130
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
++ + K ++ NIAN TPNY+AK++ SF+ +L A + + +
Sbjct: 11 LENGLSYATLNHKTIANNIANVDTPNYKAKNV-SFKDML------AEQKDISISAYRTDN 63
Query: 70 LHWNAHVIEAPLD----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
H++ + ++ + + +GN V + E K + Y + + +
Sbjct: 64 RHYDFTIRQSTPGVNNIENLRYRNNGNAVDMDAEQAKLAENQIYYNALIDRVNGKLNTLN 123
Query: 126 HVVRG 130
V++G
Sbjct: 124 TVIKG 128
>gi|253573515|ref|ZP_04850858.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847043|gb|EES75048.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon
786 str. D14]
Length = 135
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 12/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHE 59
F + RQ +++ NIAN TP ++ + SFE++L RT
Sbjct: 9 FDRLETAIQAANLRQGVIANNIANVDTPYFKRSSV-SFESMLQAEMNGNMPALQGRRTDV 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H ++ + +DQ+T + + N V I +E+ K + Y + +
Sbjct: 68 RHFVIGPTTEVPEPV----VSVDQSTAMNNNQNNVDIDSEMTKLAENQLRYNAYIEQLNY 123
Query: 120 LNSMVMHVVRG 130
L M VV G
Sbjct: 124 LIKMKRTVVEG 134
>gi|238762362|ref|ZP_04623333.1| Flagellar basal-body rod protein FlgB [Yersinia kristensenii ATCC
33638]
gi|238699347|gb|EEP92093.1| Flagellar basal-body rod protein FlgB [Yersinia kristensenii ATCC
33638]
Length = 124
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 12/124 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ R +++S N+AN +TPN++AKDI + M R + + +
Sbjct: 12 LGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDI-------DFGAEMQRAKQGSVGIAT 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S L GNTV + E + Y+ + + +
Sbjct: 65 SQRLSPQMK-----YRLPYQPSQDGNTVALNVEQAEFSKNALDYQTSLSFLNMKLVGLKQ 119
Query: 127 VVRG 130
+ G
Sbjct: 120 AIEG 123
>gi|302392399|ref|YP_003828219.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum DSM
5501]
gi|302204476|gb|ADL13154.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum DSM
5501]
Length = 135
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHL 62
+ ++ + L +RQ+ +S NIAN TP+Y+ KD+ +F++ L N + + TH+ H
Sbjct: 11 SVLTKALDGLQQRQEAISNNIANVDTPDYKRKDV-NFKSELKTALNNDSTGLTATHKNHF 69
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
S+ + + + D T ++ N V I E+ Y+ T+++
Sbjct: 70 ----STNSNLDQLSLRIKTDSNTKMRSDQNNVDIDREMSILAKNGLEYQAVTRMLSMEFD 125
Query: 123 MVMHVV 128
+ V+
Sbjct: 126 QLSSVI 131
>gi|91202526|emb|CAJ72165.1| similar to flagellar basal-body rod protein FlgB [Candidatus
Kuenenia stuttgartiensis]
Length = 125
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + S R K+V+ NIAN +TP Y+ K + +FE L + + + +
Sbjct: 9 FGLLENMLDVSSLRHKVVANNIANVNTPGYK-KMVVNFEGELEKAIQSS-------SQKN 60
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ + E +D T ++ GNTV + E+ Y++ ++L+ K +V
Sbjct: 61 FNKFEPKVVISEDVVDGT--LRNDGNTVDMEKEVATLLKNTGFYKIYSQLLAKKFDLVKA 118
Query: 127 VVRG 130
+ G
Sbjct: 119 AIDG 122
>gi|213417746|ref|ZP_03350864.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 88
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + S
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALSL 67
Query: 67 SSGLHWNAHVIEAP 80
+S H A + +P
Sbjct: 68 TSSRHIPAQAVSSP 81
>gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
Length = 130
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--RTHETHL 62
++S + R + +SENI+NA TP YR + + SF+T + A +T + HL
Sbjct: 6 NALDVSSSGLRAQANRLRHLSENISNADTPGYR-RKLVSFQTAFSLGDAPAKVQTGKVHL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KK 119
++ ++ AH PL TG Q G+ V + EL + + YE N K+ +K
Sbjct: 65 DQTALEKVYDPAH----PLADDTG-QYDGSNVNLLIELADAKEAQRSYEANLKMFEQTRK 119
Query: 120 LNSMVMHVVR 129
++S +M ++R
Sbjct: 120 MSSGLMDLLR 129
>gi|323698499|ref|ZP_08110411.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. ND132]
gi|323458431|gb|EGB14296.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans
ND132]
Length = 136
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISS---FETILNQNFL--MARTHETH 61
+ ++ + ERQ IV+ NIAN +TP Y+A+ + ++ LNQN L + RT + H
Sbjct: 9 LNVTAKVMDLRLERQNIVTGNIANVNTPGYKARRLEFEERLQSALNQNALGKLTRTQQDH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L + + + + G V + E+ + +Y +IKK
Sbjct: 69 LPIAFDPNGFKGDGIQDLQAREVYGQDE----VNLDKEMATNAKNTMMYNALASVIKKSF 124
Query: 122 SMVMHVVR 129
+ V++
Sbjct: 125 DGMGKVIQ 132
>gi|289548423|ref|YP_003473411.1| flagellar basal-body rod protein FlgB [Thermocrinis albus DSM
14484]
gi|289182040|gb|ADC89284.1| flagellar basal-body rod protein FlgB [Thermocrinis albus DSM
14484]
Length = 123
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 4 ITFFQIASQ---HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ F ++ + R K++ NIANA TP Y K++ S N + T
Sbjct: 2 MGLFDTVNRIIPLLDERWLRHKVIVSNIANADTPRYMPKELLSLR---NSEIPLKTTRPR 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ N V + + V N V + E+ K K YE L K+
Sbjct: 59 HIDPE-------NGVVYRVVEVKRSLVGNDLNGVSLEEEISKLIQNKLAYETYMYLAKRS 111
Query: 121 NSMVMHVVR 129
+ +V+R
Sbjct: 112 LDGIGNVLR 120
>gi|218887373|ref|YP_002436694.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758327|gb|ACL09226.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 136
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+ + + +RQ +V NIAN TP Y+ +++ FE L M RT + H
Sbjct: 10 NLVGKVMDMQLQRQNVVMSNIANVRTPGYKPRELE-FEKQLQSALGLDAKGRMTRTEQNH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L S+ A G V + E+ K Y T +I+
Sbjct: 69 LPSEFSADGFNADWEKAAKPRVIHGEDR----VNLDKEMAKMAKNSLHYSALTTVIRGNL 124
Query: 122 SMVMHVVR 129
V ++++
Sbjct: 125 EGVKNIIQ 132
>gi|237753201|ref|ZP_04583681.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375468|gb|EEO25559.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 144
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKESD 66
+A + + + R+ +++ NIAN STP YR KD+ +FE + L + + R + L +
Sbjct: 12 LAQEALDHRALRRDMIASNIANVSTPMYRPKDV-NFEQMMALKADDIFNRNRDLELDVAI 70
Query: 67 SSGLHWNAHVIEAPLDQTTGV------QVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
++ H E+P T + GN+V + E + G +Y+ ++K
Sbjct: 71 TNKNHLLPAKDESPYRPTIFYRDGHLARNDGNSVDLDIETSEMGKNDIMYQALVGALRKQ 130
Query: 121 NSMVMHVV 128
+ + +
Sbjct: 131 GGIYTYAI 138
>gi|212637782|ref|YP_002314307.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
WP3]
gi|212559266|gb|ACJ31720.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
WP3]
Length = 116
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q ++ ER K+++ N+ANA TP Y+A+D+ F+ +++Q
Sbjct: 9 LGIHPQTLDFRVERSKMLAGNLANAETPGYKARDL-DFKAVMSQ---------------- 51
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ + +A NTV + E + Y+ + + S +
Sbjct: 52 LNAGMSPSRDYQASYRIPYQSSADQNTVELGKEQARYSQNAMDYQTSLTFLNMKISGLRS 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|260774935|ref|ZP_05883836.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609190|gb|EEX35348.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 132
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y++K + F+ L A T +
Sbjct: 7 NALGIHQYTVGVRERNAEVISTNIAQANTPGYKSKGM-DFQKALQ-----AATSGASIGL 60
Query: 65 SDSSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
S + H A E T GNTV + E + ++ + +
Sbjct: 61 SRTDSRHIPASTQVTGEVLYRLPTQPDTGDGNTVDVDLERNLFMQNQIRHQASLDFLGSK 120
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 121 FKNLTKALKG 130
>gi|261253617|ref|ZP_05946190.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP
102891]
gi|260937008|gb|EEX92997.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP
102891]
Length = 131
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 16/133 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I +++S NIA A+TP Y+AK + F+ L A T E +
Sbjct: 7 NALGIHQHTVGVRERNAEVMSTNIAQANTPGYKAKGM-DFQKALQ-----AATSEASIGL 60
Query: 65 SDSSGLHWNAHV-------IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
S + G H A P TG GNTV + E + ++ + +
Sbjct: 61 SRTDGRHIAASTQVTGEVMYRLPTQPDTG---DGNTVDVDLERNLFMQNQIRHQASLDFL 117
Query: 118 KKLNSMVMHVVRG 130
+ ++G
Sbjct: 118 GSKFKNLTKAIKG 130
>gi|149188063|ref|ZP_01866358.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
gi|148838051|gb|EDL54993.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
Length = 131
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 12/131 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHE 59
I + +++S NIA A+TP Y+AK + F+ L + ++RT
Sbjct: 7 NALGIHQYTVGVREKNAEVISTNIAQANTPGYKAKGME-FDRALKAASSGASIGLSRTDG 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ S + + P TG GNTV + E + ++ + +
Sbjct: 66 RHISASTNVSGEM---LYRIPTQPDTG---DGNTVDVDLERNLFMQNQLRHQASLDFLGG 119
Query: 120 LNSMVMHVVRG 130
+ ++G
Sbjct: 120 KFKNMTKAIKG 130
>gi|258404781|ref|YP_003197523.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense
DSM 5692]
gi|257797008|gb|ACV67945.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense
DSM 5692]
Length = 136
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-----MARTHE 59
+ + Q N + ++++ NIANA TP Y ++ + FE L F M THE
Sbjct: 9 STIGLLEQSLNLRARNHEMLTSNIANAETPGYASQHLQ-FEEQLRAAFDPEAQKMEATHE 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H G + + ++ + G VS N V + E+ + + YE +++ +
Sbjct: 68 DHF------GFVDDINQVDGEVISDPGKAVSDNGVRMEQEMARLSENQIKYETAARILSR 121
Query: 120 LNSMVMHVVR 129
+ + +V++
Sbjct: 122 KFASLEYVIQ 131
>gi|312884837|ref|ZP_07744529.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367489|gb|EFP95049.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 120
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ N+ +R K+++ N+AN TP Y AKD+ SF T+++Q
Sbjct: 7 NALGVHPDTLNFRVQRTKVLASNLANVDTPGYLAKDL-SFATVVSQVSSQGVDKP----- 60
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
I++ +GNTV + E K ++ + + + +
Sbjct: 61 -------IPKLDIQSQYSVPYQNSKNGNTVELGVEQGKFTQNNMDFQTSLTFLNMKFNGL 113
Query: 125 MHVVRG 130
++G
Sbjct: 114 AKAIQG 119
>gi|242278629|ref|YP_002990758.1| flagellar basal body rod protein FlgB [Desulfovibrio salexigens DSM
2638]
gi|242121523|gb|ACS79219.1| flagellar basal-body rod protein FlgB [Desulfovibrio salexigens DSM
2638]
Length = 136
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHL 62
Q+ + + +RQ +VS N+AN +TP Y+ K + E + L+ M RT + H+
Sbjct: 10 QLTGKVLDLRLQRQNLVSSNLANVNTPGYKEKRLEFEEDLQKAMNLDAKGKMTRTSKMHI 69
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ + + + G N V + E+ Y +++I K
Sbjct: 70 PTAFDANKFEGDTISKFEPRVIHGE----NRVDMDKEMVTMAKNTLYYNALSQVIGKNFQ 125
Query: 123 MVMHVVR 129
+ +++
Sbjct: 126 GMTKIIQ 132
>gi|312879580|ref|ZP_07739380.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
12260]
gi|310782871|gb|EFQ23269.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
12260]
Length = 134
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------QNFLMARTHETH 61
+ + LS R ++N+ANA+TP Y +++ SFE L + +A T H
Sbjct: 8 GVIQKDLEGLSRRMGSTTQNLANANTPKYVRREV-SFEDQLEALIEAPRRLPLAVTDGHH 66
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ ++ H +E+ + + N V EL + + +Y+ T+++ +
Sbjct: 67 M--TNMPKGIEFVHPVESRV-GNEVYRYDENNVDPETELARLAETRMMYQAMTRILGRKL 123
Query: 122 SMVMHVVRG 130
SM + G
Sbjct: 124 SMYRTAIGG 132
>gi|91224202|ref|ZP_01259465.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
gi|269965641|ref|ZP_06179754.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
gi|91191113|gb|EAS77379.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
gi|269829709|gb|EEZ83945.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
Length = 120
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 7 NALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQVTAGGVNKP----- 60
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
++A +GNTV + E K ++ + + + +
Sbjct: 61 -------VPKFQVQAQYSVPYQNSKNGNTVELGVEQAKFTQNNMDFQTSLTFLNMKFNGL 113
Query: 125 MHVVRG 130
+ G
Sbjct: 114 AKAIEG 119
>gi|330839540|ref|YP_004414120.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
gi|329747304|gb|AEC00661.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
Length = 137
Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------ARTH 58
+ + + RQ+++S NIAN +TPN++ ++ FE +L + + RTH
Sbjct: 11 LDVMQRGMGAANLRQEVISHNIANVNTPNFKKSNVV-FEDLLAKELDLDAEGGLKIVRTH 69
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ H+ S + + LD+++ ++ N V I E+ + + +
Sbjct: 70 DRHMPIS-----FRGRALAKIELDKSSSMRYDNNNVDIDVEMASLAKNSLYFNALARQVG 124
Query: 119 KLNSMVMHVVRG 130
S + V+ G
Sbjct: 125 AGFSQMRSVING 136
>gi|2494517|sp|P70910|FLGB_BORHE RecName: Full=Flagellar basal-body rod protein flgB
gi|1621620|gb|AAB51473.1| flagellar rod protein FlgB [Borrelia hermsii]
Length = 135
Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL---KE 64
+A ++ + LS RQ ++++NIAN TPN++ ++ FE L + L R L +
Sbjct: 9 DLAHRYLDVLSLRQSVIADNIANVDTPNFKRSKVT-FEAELERAILNERASNLSLIRGND 67
Query: 65 SDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ +G ++ P LD + ++ GN V I +E+ + +Y L T +
Sbjct: 68 KNLNGFKELGYLDVKPSRMLDYLSILKNDGNNVDIDSEMKNLIQNQMIYSLFTNI 122
>gi|330501134|ref|YP_004378003.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina NK-01]
gi|328915420|gb|AEB56251.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina NK-01]
Length = 109
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ S+ +R +I++ N+AN TP + A+DI + M R + S
Sbjct: 2 GLHSRALELRMQRSEILAANLANEDTPGFLARDI-------DFAGEMQRLDPQQAFAASS 54
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ L + T GN+V ++ E ++ + I +
Sbjct: 55 ADLKYRV---------PTQPSQDGNSVELSVEQAAFSKNSMDFQTSLTFISMKFRGLKQA 105
Query: 128 VRG 130
+ G
Sbjct: 106 IEG 108
>gi|260767920|ref|ZP_05876854.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
gi|260615950|gb|EEX41135.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
gi|315179623|gb|ADT86537.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
Length = 120
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 13/124 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N+ +R K+++ N+AN TP Y AKD++ F+T+++
Sbjct: 9 LGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDLT-FKTVMSTAGNRGV---------- 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+E+ +GNTV + E K ++ + + + +
Sbjct: 58 --NPGIPEWQVESQYSIPYQNSKNGNTVELGVEQAKFTQNNMDFQTSLTFLNMKFNGLAK 115
Query: 127 VVRG 130
+ G
Sbjct: 116 AIEG 119
>gi|149189833|ref|ZP_01868113.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
gi|148836319|gb|EDL53276.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
Length = 120
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q N+ +R K+++ N+AN TP Y AKD+ SF T++ Q +
Sbjct: 9 LGVHPQALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMKQANPNGV-------HTP 60
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ L GNTV + E K ++ + + S +
Sbjct: 61 TPKLDIATQ-----YSVPYQNSKDGNTVELGVEQAKFTQNNMDFQTSLTFMNMKFSGLAK 115
Query: 127 VVRG 130
+ G
Sbjct: 116 AIEG 119
>gi|302874586|ref|YP_003843219.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans
743B]
gi|307690803|ref|ZP_07633249.1| flagellar basal body rod protein FlgB [Clostridium cellulovorans
743B]
gi|302577443|gb|ADL51455.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans
743B]
Length = 129
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
+ + + + ++ R ++V+ NIAN +T ++ + SFE L ++ + T HL
Sbjct: 9 YDLIKKDLDAVAIRNRVVANNIANINTKGFK-RQYVSFEEQLKKSVKDIELKTTDRRHLS 67
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + G D T V+ GN V + E+ + + L E + +M
Sbjct: 68 DGTTYGSAV------VKKDTKTSVREDGNNVDMDIEMMELSSNQLLNEALVSNLNSRYNM 121
Query: 124 VMHVVRG 130
V+ G
Sbjct: 122 TRSVING 128
>gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
5427]
gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
5427]
Length = 122
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + + + + R+ I+SENI+N TP Y+ KD+ FETIL + T
Sbjct: 1 MNIFSDIDLMNTAISATMLRKGIISENISNVDTPGYKRKDVR-FETILEKEIKKGGTAGL 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+LK + + ++ GN V I E+ + + Y +
Sbjct: 60 NLK-------DIEPEIYTD--YANSSYRLDGNNVDIDVEMAEEAKVSARYNALVTRVNSQ 110
Query: 121 NSMVMHVVR 129
V++
Sbjct: 111 LGRFSTVLQ 119
>gi|260886628|ref|ZP_05897891.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
gi|260863771|gb|EEX78271.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
35185]
Length = 142
Score = 70.7 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--------ARTH 58
+ + + RQ+++S NIAN +TPN++ ++ FE +L + + RTH
Sbjct: 16 LDVMQRGMGAANLRQEVISHNIANVNTPNFKKSNVV-FEDLLAKELDLDAEGGLKIVRTH 74
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ H+ S + + LD+++ ++ N V I E+ + + +
Sbjct: 75 DRHMPIS-----FRGRALAKIELDKSSSMRYDNNNVDIDVEMASLAKNSLYFNALARQVG 129
Query: 119 KLNSMVMHVVRG 130
S + V+ G
Sbjct: 130 AGFSQMRSVING 141
>gi|313904267|ref|ZP_07837645.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens
6]
gi|313470817|gb|EFR66141.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens
6]
Length = 131
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + ++L +RQ I NIAN TP ++++ ++ FE L +A+ E+D
Sbjct: 10 SLDQKTLDYLWQRQNITVNNIANVDTPKFKSQYLT-FEDTLASRIRLAKKGTVRAGEADE 68
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
++ GN V + E Y Y++ + +
Sbjct: 69 IDRAIRHTTATVHTTDNETSRLDGNNVDMDQEQVSLAKTAYEYQMLVNSVSNSLKRLDAA 128
Query: 128 VR 129
+
Sbjct: 129 AK 130
>gi|203287754|ref|YP_002222769.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
gi|201084974|gb|ACH94548.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
Length = 135
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ + L RQ +V++NIAN TPN++ ++ FE L + L +T+ +L
Sbjct: 9 DLTHRYLDVLGLRQSVVADNIANVDTPNFKRSKVT-FEAELERAILNEKTN--NLSLIRG 65
Query: 68 SGLHWNAH--------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ H + + LD + + +GN V I +E+ + +Y L T +
Sbjct: 66 NNKHLDGFKELGYLDVKPQRMLDHLSTLNNNGNNVDIDSEMKSLVQNQMMYRLFTNI 122
>gi|167626152|ref|YP_001676446.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
gi|167356174|gb|ABZ78787.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
HAW-EB4]
Length = 116
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I ++ ER K+++ N+ANA TP Y+A+D+ +L N M+
Sbjct: 9 LGIHPHTLDFRVERSKMLAGNLANAETPGYKARDLDFKSVMLQINSGMS----------- 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+A NTV + E + Y+ + + S +
Sbjct: 58 ------PDRSYQASYRVPYQTSADQNTVELGKEQARYSQNAMDYQTSLTFLNMKISGLRT 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|188586014|ref|YP_001917559.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350701|gb|ACB84971.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 134
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ N ++R +++S NIAN +TP ++ + FE L + + ++ +
Sbjct: 8 GLLGNSLNGTTKRHEVISNNIANVNTPGFK-RGRVDFEEQLKEAM---KADSKDIEGKIT 63
Query: 68 SGLHWNAHVIEAPLDQ------TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
H +++ ++ + ++ N V + E+ + ++ T+ +
Sbjct: 64 REKHIPIGKVDSTIEPQVRRESDSSMRNDDNNVDVDTEMSRLTQNSLHHQALTRQLSSEF 123
Query: 122 SMVMHVVRG 130
+ + ++G
Sbjct: 124 NKLRSAIQG 132
>gi|323492341|ref|ZP_08097494.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
gi|323313388|gb|EGA66499.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
20546]
Length = 120
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ N+ +R K+++ N+AN TP Y AKD+ SF T++NQ H+ +
Sbjct: 7 NALGVHPDALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQ-MAPQSVHKPVPQL 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
SS GNTV ++ E K ++ + + +
Sbjct: 65 QISSQYSI-----------PYQNSKDGNTVELSVEQGKFTQNNMDFQTSLTFLNMKFKGL 113
Query: 125 MHVVRG 130
V+ G
Sbjct: 114 AKVIEG 119
>gi|154174839|ref|YP_001408540.1| flagellar basal body rod protein FlgB [Campylobacter curvus 525.92]
gi|112803089|gb|EAU00433.1| flagellar basal-body rod protein FlgB [Campylobacter curvus 525.92]
Length = 144
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 17/132 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------------NFLMAR 56
+ RQK++S NIAN TP Y+A+DI +FE++L Q +A+
Sbjct: 12 LVEAAMAAREMRQKLISGNIANIDTPFYKARDI-NFESVLRQKADEIYNAKSSKKLELAK 70
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T E H D + L + NTV + E + +
Sbjct: 71 TDEAHFAAVDFPKNDSA----QVFLRDGHMARNDANTVDLDVETTELSKNNIMLSAIDGA 126
Query: 117 IKKLNSMVMHVV 128
K ++ V+
Sbjct: 127 YKTQGNIFKSVI 138
>gi|288940406|ref|YP_003442646.1| flagellar basal-body rod protein FlgB [Allochromatium vinosum DSM
180]
gi|288895778|gb|ADC61614.1| flagellar basal-body rod protein FlgB [Allochromatium vinosum DSM
180]
Length = 135
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTHET 60
F + + R ++++ N+AN TPNY+++D F +L + M A T
Sbjct: 9 FGVLPSAVLIKARRAELLASNLANVDTPNYKSRDFH-FTEVLAEVEGMSNRMKLATTRAN 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL ++ Q + GNTV E Y+ + + +
Sbjct: 68 HLTNEIDKSRALEPELLYRIPAQP---SLDGNTVDPQLERAAFTENTTHYQSTLEFLDRR 124
Query: 121 NSMVMHVV 128
S + +
Sbjct: 125 VSSLRKAL 132
>gi|226313073|ref|YP_002772967.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC
100599]
gi|226096021|dbj|BAH44463.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC
100599]
Length = 136
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 15/139 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---------NQN 51
M Q+ + + + R + ++ N+AN TP ++++ + FE+ L N
Sbjct: 1 MLDSYHLQVLERSLDAATLRHRTIANNLANIDTPQFKSQQVI-FESFLQDELNARAGNGK 59
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
RT++ HL ++ V + + +Q SGN V + E + + Y
Sbjct: 60 LEAYRTNQRHLPFGNAG-----VAVPQVVSNPNNFIQNSGNDVDLEAETTELAKNQIWYS 114
Query: 112 LNTKLIKKLNSMVMHVVRG 130
T+L + V+ G
Sbjct: 115 GLTQLTAGHFQKLRSVIEG 133
>gi|298530646|ref|ZP_07018048.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510020|gb|EFI33924.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
thiodismutans ASO3-1]
Length = 136
Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-----LNQNFLMARTHETHL 62
Q+ S+ + ERQ +VS N+AN TP Y+A+ + E + L+ MART H+
Sbjct: 10 QLTSRVLDMRLERQNVVSSNLANVKTPGYQARRVEFEEQLQSALNLDARGKMARTDPGHV 69
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ +NA I++ + + + V + E+ +Y + + +K
Sbjct: 70 SGA-FDPQGFNAQFIKSMEPRVYQGE---DAVDLDKEMSIMSQNTLMYNALSMVQQKNFQ 125
Query: 123 MVMHVVR 129
+ V+R
Sbjct: 126 GLKTVIR 132
>gi|153949189|ref|YP_001399631.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
IP 31758]
gi|152960684|gb|ABS48145.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
IP 31758]
Length = 121
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 12/124 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ R +++S N+AN +TPN++AKDI + M R + +
Sbjct: 9 LGVHPMAMQLRLTRAELLSANLANVNTPNFQAKDI-------DFAAEMQRAKRGNGVMAS 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S Q + GNTV + E + Y+ + + + +
Sbjct: 62 SDLTSPKIK-----YRQPYQPSLDGNTVALNVEQAEFSKNALDYQTSLSFLNMKLTGLKQ 116
Query: 127 VVRG 130
+ G
Sbjct: 117 AIEG 120
>gi|94987302|ref|YP_595235.1| flagellar basal body rod protein FlgB [Lawsonia intracellularis
PHE/MN1-00]
gi|94731551|emb|CAJ54914.1| Flagellar basal body protein [Lawsonia intracellularis PHE/MN1-00]
Length = 137
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+ ++ + +RQ ++ NIAN +TP YR + I FE L + M+RT E H
Sbjct: 10 NLVAKVMDMQLQRQNVIMSNIANVNTPRYRPRTIE-FEDQLQKALGLDMRGRMSRTEENH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L + + +NA + + T V + E+ Y T++IK
Sbjct: 69 L-PAVFNPEGFNAE-WDKAIKPTVVHGEDR--VNLDKEMANMAKNSLQYNALTQVIKGNL 124
Query: 122 SMVMHVV 128
V +++
Sbjct: 125 DGVKNII 131
>gi|170289254|ref|YP_001739492.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
gi|281412856|ref|YP_003346935.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
RKU-10]
gi|170176757|gb|ACB09809.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
gi|281373959|gb|ADA67521.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
RKU-10]
Length = 127
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F Q + RQ + S NIAN STP Y+ K ++ FE +L ++ +++T+E HL
Sbjct: 6 FYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYVA-FEELLKESEMKLKLSKTNEKHLI 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S S +D TT ++ GN V I E+ + Y++ ++L+
Sbjct: 65 GSKS------VVEPRVLVDNTTTMRNDGNNVDIDYEMVQLVKNGLRYQVLSRLMSMNIDR 118
Query: 124 VMHVVRG 130
V+RG
Sbjct: 119 YNAVLRG 125
>gi|315186392|gb|EFU20152.1| flagellar basal-body rod protein FlgB [Spirochaeta thermophila DSM
6578]
Length = 138
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--------TH 58
I + + R++I++ NIANA TPN++ ++ +FE+ L + + T
Sbjct: 11 LDILHREMDVNLIRRQIIANNIANADTPNFKRSEL-NFESSLKKALESEKVRKLPAFITD 69
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ + + + LD T + +GN V + E + + LY + + +
Sbjct: 70 PRHIPFNR--PVDYRTVRPRKILDFWTTSKNNGNNVDLEQETMDLLNNELLYNMMVQTVS 127
Query: 119 KLNSMVMHVVR 129
S V V+R
Sbjct: 128 HQFSQVQLVLR 138
>gi|120603704|ref|YP_968104.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris DP4]
gi|120563933|gb|ABM29677.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris DP4]
Length = 136
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+ + + +RQ +V NIAN TP Y+ +++ FE L M T + H
Sbjct: 10 NLVGKVMDMQLQRQNVVMSNIANVRTPGYKPRELE-FEKELQSALGLDAKGRMTITEKQH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L E V + V + E+ K Y +IK
Sbjct: 69 LPAV----FDPEGFGPEWSKTFKPRVVHGEDRVNLDKEMTKMAKASLQYNALATVIKGNF 124
Query: 122 SMVMHVV 128
+ ++
Sbjct: 125 EGIKTII 131
>gi|28900119|ref|NP_799774.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus RIMD
2210633]
gi|153837054|ref|ZP_01989721.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ3810]
gi|260365769|ref|ZP_05778265.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
K5030]
gi|260880691|ref|ZP_05893046.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AN-5034]
gi|260897703|ref|ZP_05906199.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
Peru-466]
gi|260899386|ref|ZP_05907781.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ4037]
gi|1272365|gb|AAA97473.1| LfgB [Vibrio parahaemolyticus]
gi|28808402|dbj|BAC61607.1| LfgB [Vibrio parahaemolyticus RIMD 2210633]
gi|149749642|gb|EDM60387.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ3810]
gi|308086275|gb|EFO35970.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
Peru-466]
gi|308091690|gb|EFO41385.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AN-5034]
gi|308109180|gb|EFO46720.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
AQ4037]
gi|308115060|gb|EFO52600.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
K5030]
gi|328470098|gb|EGF41009.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
10329]
Length = 120
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + N+ +R K+++ N+AN TP Y AKD+ SF T++NQ ++
Sbjct: 7 NALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQMSTNGVSN------ 59
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
++A GNTV + E K ++ + + + +
Sbjct: 60 ------SVPKLQVQAQYSVPYQNSKDGNTVELGVEQAKFTQNNMDFQTSLTFLNMKFNGL 113
Query: 125 MHVVRG 130
+ G
Sbjct: 114 AKAIEG 119
>gi|260768786|ref|ZP_05877720.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
gi|260616816|gb|EEX42001.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
Length = 93
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
++ NIANA TPNY+AKD+ SF ++ LM T ++ E+
Sbjct: 2 LASNIANADTPNYKAKDV-SFNVVM--TGLMKETSAIGIQ-------------TESLYRI 45
Query: 84 TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
GNTV + +E + Y+ + + +K S + + G
Sbjct: 46 PVQRSRDGNTVELQSEQARFAQNNMEYQQSLQFLKSKISGLKRAIEG 92
>gi|332162904|ref|YP_004299481.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318604249|emb|CBY25747.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325667134|gb|ADZ43778.1| Flagellar basal-body rod protein FlgB [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330863354|emb|CBX73477.1| hypothetical protein YEW_ES20720 [Yersinia enterocolitica W22703]
Length = 116
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ R +++S N+AN +TPN++AKDI + M R + +
Sbjct: 9 LGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDI-------DFGAEMQRAKRGGVGMTS 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ GNTV + E + Y+ + + S +
Sbjct: 62 P----------QMKYRLPYQPSQDGNTVALHIEQAEFSKNALDYQTSLSFLNMKLSGLKQ 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|46578732|ref|YP_009540.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448144|gb|AAS94799.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str.
Hildenborough]
gi|311232604|gb|ADP85458.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris RCH1]
Length = 136
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+ + + +RQ +V NIAN TP Y+ +++ FE L M T + H
Sbjct: 10 NLVGKVMDMQLQRQNVVMSNIANVRTPGYKPRELE-FEKELQSALGLDAKGRMTITEKQH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L E V + V + E+ K Y +IK
Sbjct: 69 LPAV----FDPEGFGPEWSKTFKPRVVHGEDRVNLDKEMTKMAKASLQYNALATVIKGNF 124
Query: 122 SMVMHVV 128
+ ++
Sbjct: 125 EGIKTII 131
>gi|203284215|ref|YP_002221955.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
gi|201083658|gb|ACH93249.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
Length = 135
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ + L RQ +V++NIAN TPN++ ++ FE L + L +T+ +L
Sbjct: 9 DLTHRYLDVLGLRQSVVADNIANVDTPNFKRSKVT-FEAELERAILNEKTN--NLSLIRG 65
Query: 68 SGLHWNAH--------VIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ H + + LD + + +GN V I +E+ + +Y L T +
Sbjct: 66 NNKHLDGFKELGYLDVKPQRMLDHLSTLNNNGNNVDIDSEMKSLVQNQMMYGLFTNI 122
>gi|307718595|ref|YP_003874127.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
gi|306532320|gb|ADN01854.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
Length = 138
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--------TH 58
I + + R++I++ NIANA TPN++ ++ +FE+ L + + T
Sbjct: 11 LDILHREMDVNLIRRQIIANNIANADTPNFKRSEL-NFESSLKKALESEKVRKLPAFITD 69
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ + + + LD T + +GN V + E + + LY + + +
Sbjct: 70 PRHIPFNR--PVDYRTVRPRKILDFWTTSKNNGNNVDLEQETMDLLNNELLYNMMVQAVS 127
Query: 119 KLNSMVMHVVR 129
S V V+R
Sbjct: 128 HQFSQVQLVLR 138
>gi|213028812|ref|ZP_03343259.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 98
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 39 KDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNT 93
+DI F + L + + R + S +S H A + +P + GNT
Sbjct: 1 RDI-DFASELKKVMVRGREETGGVALSLTSSRHIPAQAVSSPAVDLLYRVPDQPSLDGNT 59
Query: 94 VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
V + E + Y++ ++ +M+V++G
Sbjct: 60 VDMDRERTQFADNSLKYQMGLTVLGSQLKGMMNVLQG 96
>gi|323490139|ref|ZP_08095359.1| flagellar basal body rod protein FlgB [Planococcus donghaensis
MPA1U2]
gi|323396187|gb|EGA89013.1| flagellar basal body rod protein FlgB [Planococcus donghaensis
MPA1U2]
Length = 133
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN-----QNFLMARTHETHLKE 64
Q + + +Q++ S NIAN T NY++K + F+ LN QN +T H+
Sbjct: 11 MEQALSAATLKQRVHSANIANVDTANYKSKKV-DFQAALNTAMSNQNLSSYKTDSRHVSF 69
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S+ S + +T +GN V + E+ + + Y T+ + + +
Sbjct: 70 SNESL----IGTTRVLTNNSTQYNHNGNNVDMDLEMAELAKNQLWYNAVTERVNGKLNSL 125
Query: 125 MHVVRG 130
V+ G
Sbjct: 126 SSVING 131
>gi|15895434|ref|NP_348783.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
ATCC 824]
gi|15025158|gb|AAK80123.1|AE007716_12 Flagellar basal-body rod protein FlgB [Clostridium acetobutylicum
ATCC 824]
gi|325509580|gb|ADZ21216.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
EA 2018]
Length = 134
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 10/129 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETH 61
+ + S+ + SER K +S NIAN +T +Y+ + SFE L N M RT H
Sbjct: 12 YTYGLLSKGLDATSERGKAISNNIANVNTKDYK-RYYVSFEDNLKNSMDNLGMERTDSRH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + S G I+ D + V GN V I +E+ Y I
Sbjct: 71 INDGASFGD------IQLKQDTASSVNEDGNNVDIDSEMSNDAQNTLEYYTLINQISSRI 124
Query: 122 SMVMHVVRG 130
+M +V+ G
Sbjct: 125 NMERNVING 133
>gi|264678617|ref|YP_003278524.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|299533500|ref|ZP_07046879.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44]
gi|262209130|gb|ACY33228.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
CNB-2]
gi|298718507|gb|EFI59485.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44]
Length = 127
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN----FLMARTHE 59
+ + +R ++++ NIANA TP Y+AKDI F+ L + + T++
Sbjct: 1 MDSLRFEDAALYLRVKRMEVLASNIANADTPGYQAKDI-DFKAALEETQRQMLTVQSTNK 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK--SGHIKYLYELNTKL 116
+HL + + + + NTV + E + I+ + +N +
Sbjct: 60 SHLGNIAPTSIDPQI-----AFRPVSQNAMDRNTVDLDQERASFTANAIRTQFAMNQAV 113
>gi|308273187|emb|CBX29790.1| hypothetical protein N47_F14850 [uncultured Desulfobacterium sp.]
Length = 135
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 14/131 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN------FLMARTH 58
F I +RQ +S NI+N TP YR KDI F+ + + ++ T+
Sbjct: 9 NIFNILENAIGVAYQRQNTISSNISNLETPGYRPKDI-DFKAAMAKAIGSESQISLSGTN 67
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
H+ + + A E+ + N V I + + +Y+ +++
Sbjct: 68 AGHIDLYNEANQEAEAFEEESDWNGV-------NYVSIDKMVNRMTENNLIYKTAAEVML 120
Query: 119 KLNSMVMHVVR 129
+ S++ V+R
Sbjct: 121 RKISLIKEVIR 131
>gi|300870978|ref|YP_003785849.1| flagellar basal body rod protein FlgB [Brachyspira pilosicoli
95/1000]
gi|300688677|gb|ADK31348.1| flagellar basal body rod protein, FlgB [Brachyspira pilosicoli
95/1000]
Length = 142
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHET 60
IA + N R +++++NIAN STPN++ D++ FE L + RT
Sbjct: 15 IAKKLLNVYGLRAEVIADNIANVSTPNFKRSDVT-FEYQLARALDSEKYDGIEAKRTDPR 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + + I D T + N V I E+ + Y++ ++++
Sbjct: 74 HFPFNMPMDYSEVSPTITV--DYDTNYRNDKNNVDIDKEMAEEAKNTLRYQMFSQIVNAQ 131
Query: 121 NSMVM 125
+
Sbjct: 132 YRDIR 136
>gi|170737035|ref|YP_001778295.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
MC0-3]
gi|169819223|gb|ACA93805.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
MC0-3]
Length = 122
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 12/124 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ S +ER K+++ N+AN STP Y+A+D+ RT ++ +D
Sbjct: 9 LGVHSAALKVRAERTKLLASNLANESTPAYQARDLDF------------RTSLGYVLAND 56
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ E + GNTV + E ++ + + +
Sbjct: 57 AFDAALRFGGDEPMYRVPSSPSQDGNTVELGVEQAAFSQNAADFQASLTFVNMKIKGLKS 116
Query: 127 VVRG 130
+ G
Sbjct: 117 AITG 120
>gi|308050027|ref|YP_003913593.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
gi|307632217|gb|ADN76519.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
9799]
Length = 116
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ++ ER K++S N+ANA TP Y A+D+ F ++ Q T
Sbjct: 9 LGVHGQTLDFRVERAKVLSGNLANAETPGYLARDL-DFSRLMTQLERGQATDRN------ 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ GNTV + E + ++ + + +
Sbjct: 62 ----------YDHAYRVPYQTSADGNTVELGQEQARFSQNAMDFQTSLTFLNMKIQGLQK 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|312882662|ref|ZP_07742399.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369623|gb|EFP97138.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 132
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I + +++S NIA ++TP Y++K + F+ L A T E ++
Sbjct: 7 NALGIHQHTVGVRARNAELISTNIAQSNTPGYKSKGM-DFQRALQ-----AATSEANIGL 60
Query: 65 SDSSGLHWNAHVI---EAPLDQTTGVQV-SGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
S + H A E T GNTV + E + ++ + +
Sbjct: 61 SLTDSRHIPASTRVTGEVMYRLPTQPDTGDGNTVDVDLERNLFMQNQIRHQASLDFLGGK 120
Query: 121 NSMVMHVVRG 130
+ ++G
Sbjct: 121 FKNLTKALKG 130
>gi|238752869|ref|ZP_04614334.1| Flagellar basal-body rod protein FlgB [Yersinia rohdei ATCC 43380]
gi|238708908|gb|EEQ01161.1| Flagellar basal-body rod protein FlgB [Yersinia rohdei ATCC 43380]
Length = 116
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ R +++S N+AN +TPN++AKDI + M R + +
Sbjct: 9 LGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDI-------DFAAEMQRAKRGGVGMTS 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ GNTV + E Y+ + + S + H
Sbjct: 62 P----------QMKYRLPYQPSQDGNTVALNVEQANFSQNALDYQTSLSFLNMKLSGLKH 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|154250381|ref|YP_001411206.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
Rt17-B1]
gi|154154317|gb|ABS61549.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
Rt17-B1]
Length = 131
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F + +RQ+I ++NIANA TP Y+ K I+ FE L ++ MART E HL
Sbjct: 10 FDTLKTALDVQMKRQEIHAQNIANAETPGYKRKYIA-FEEYLQESKMKLQMARTSEKHLP 68
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + V T + N V I E+ + Y++ ++L+
Sbjct: 69 SSIKTITAKQVTVK------NTTLTNDKNNVDIDMEMTEMVKDALRYQVLSRLMSANIDR 122
Query: 124 VMHVVR 129
V+R
Sbjct: 123 YNTVLR 128
>gi|222100201|ref|YP_002534769.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM
4359]
gi|221572591|gb|ACM23403.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM
4359]
Length = 137
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F Q + RQKI S NIAN STP Y+ K ++ FE L ++ +ART E HL
Sbjct: 16 FYTLKQAMDVSLLRQKIHSLNIANVSTPGYKRKYVA-FEEFLKESKMRLELARTSEKHL- 73
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
G T ++ GN V I E+ + Y++ T+L+
Sbjct: 74 -----GGSQRVVEPRVLTQNDTTMRNDGNNVDIDYEMVQLVKNGLRYQVLTRLMS 123
>gi|150021010|ref|YP_001306364.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
BI429]
gi|149793531|gb|ABR30979.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
BI429]
Length = 127
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
F + +RQ+I S+NIANA TPNY+ K I FE + N++ + T H+K
Sbjct: 6 FNTLKVAMDVALKRQEIHSQNIANAETPNYKRKYIV-FEELFNESKMRLKLKTTSNQHIK 64
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + + + T + GN V I E+ + Y+ ++L+
Sbjct: 65 SV------PDVVNLILKVQKNTSLTNDGNNVDIDVEIAEMVKNALRYQTLSRLMSSNIER 118
Query: 124 VMHVVR 129
V+R
Sbjct: 119 YNTVIR 124
>gi|167567747|ref|ZP_02360663.1| flagellar basal-body rod protein FlgB [Burkholderia oklahomensis
EO147]
gi|167574698|ref|ZP_02367572.1| flagellar basal-body rod protein FlgB [Burkholderia oklahomensis
C6786]
Length = 117
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 9/123 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ +ER K+++ N+AN TP Y+A+D+ F+ + R D+
Sbjct: 2 DLHPAALKLRAERTKMLASNLANLDTPGYQARDL-DFKASMAAAAGSGR-------RGDA 53
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G + GNTV + E ++ + + +
Sbjct: 54 FGAALDGEAT-LGYRVPYQPAQDGNTVELGVEQAAFAQNAADFQTSLTFLNLKLKGLQAA 112
Query: 128 VRG 130
+ G
Sbjct: 113 ITG 115
>gi|160903120|ref|YP_001568701.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
gi|160360764|gb|ABX32378.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
Length = 133
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 11/130 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHET 60
FQI + LS RQ ++S+NIAN TP Y+ K + FE L + + +
Sbjct: 7 FQIIPNTMDALSLRQNVISQNIANYETPGYKRKYV-DFENELQKALSEDSALTLKVNRDQ 65
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + S G +D + ++ GN V EL + Y ++L
Sbjct: 66 HINNTLSLGKIQP----NIQIDNSKSLRDDGNNVDPDMELVRMTQNTLKYNTLSRLTTYA 121
Query: 121 NSMVMHVVRG 130
+RG
Sbjct: 122 IQRYETAIRG 131
>gi|304404241|ref|ZP_07385903.1| flagellar basal-body rod protein FlgB [Paenibacillus
curdlanolyticus YK9]
gi|304347219|gb|EFM13051.1| flagellar basal-body rod protein FlgB [Paenibacillus
curdlanolyticus YK9]
Length = 136
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHE 59
F+ RQK++S+NIAN TPN++ ++ FE +L RT+
Sbjct: 9 FRRLETAIQSAETRQKVISDNIANVDTPNFKRSEVL-FEDLLADAMGTNEKKIAGIRTNA 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H+ SS E LD+ + +GN V I E+ + Y + +
Sbjct: 68 RHIPIGQSSS----IPTPEVVLDENNSINNNGNNVDIDREMTLLAKNQLAYNFYIQQVNH 123
Query: 120 LNSMVMHVVRG 130
M+ + G
Sbjct: 124 DAKMMTTAIEG 134
>gi|157164065|ref|YP_001467063.1| flagellar basal body rod protein FlgB [Campylobacter concisus
13826]
gi|112800415|gb|EAT97759.1| flagellar basal-body rod protein FlgB [Campylobacter concisus
13826]
Length = 144
Score = 68.8 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 17/132 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN------------QNFLMAR 56
+ RQK++S N+AN TP Y+A+D+ FE +L + +A+
Sbjct: 12 LVESALAGRELRQKLISGNLANVDTPFYKARDVR-FEDVLREKANEIYNVSESKKLNLAK 70
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+E H+ D + L + NTV + E + G +
Sbjct: 71 TNEAHMAAVDFPKSD----TAQIFLRDGHMARNDANTVDLDVETTEMGKNTVMINALDSA 126
Query: 117 IKKLNSMVMHVV 128
K ++ V+
Sbjct: 127 YKAQGNIFKSVI 138
>gi|302387798|ref|YP_003823620.1| flagellar basal-body rod protein FlgB [Clostridium saccharolyticum
WM1]
gi|302198426|gb|ADL05997.1| flagellar basal-body rod protein FlgB [Clostridium saccharolyticum
WM1]
Length = 126
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+A + ++L +QKI NIAN TP Y+A+ ++ FE + + R S
Sbjct: 10 SMAEKTLDYLWSKQKITMNNIANGDTPGYKAQYVT-FEDEFRKRLMSGRQ-----GTSRD 63
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G N+ Q ++ GN V E + Y+ + + + +
Sbjct: 64 IGNIINSSRHFVRNTQDESARMDGNNVNTDVESVELARTTLQYQYELSALNSEITRLRTM 123
Query: 128 VRG 130
++G
Sbjct: 124 IKG 126
>gi|258622485|ref|ZP_05717507.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
gi|258625237|ref|ZP_05720149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
gi|262173351|ref|ZP_06041028.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
gi|258582484|gb|EEW07321.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
gi|258585185|gb|EEW09912.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
gi|261890709|gb|EEY36696.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
Length = 120
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 7 NALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQT------------G 53
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
S S +E GNT + E K ++ + + + +
Sbjct: 54 SGSVHEPVPKFQVETKYSVPYQNSKDGNTAELGIEQAKFTQNNMDFQTSLTFLNLKFNGL 113
Query: 125 MHVVRG 130
+ G
Sbjct: 114 AKAIEG 119
>gi|315125981|ref|YP_004067984.1| LfgB [Pseudoalteromonas sp. SM9913]
gi|315014495|gb|ADT67833.1| LfgB [Pseudoalteromonas sp. SM9913]
Length = 124
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 9/117 (7%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+R +I++ N+AN TP ++++D+ Q + + ++ D +G
Sbjct: 15 MKLRLDRAEIIASNLANVDTPGFKSRDVD-----YRQIMQSVSSSFSQNRDVDFAG---- 65
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
E GNTV + E K ++ + + + + V+ G
Sbjct: 66 VQTDELKYRVPYQPSSDGNTVELNIEQAKFASNSMDFQTSLTFLNMKINGLHKVISG 122
>gi|118475637|ref|YP_891881.1| flagellar basal body rod protein FlgB [Campylobacter fetus subsp.
fetus 82-40]
gi|118414863|gb|ABK83283.1| flagellar basal-body rod protein FlgB [Campylobacter fetus subsp.
fetus 82-40]
Length = 146
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 18/134 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-------------NQNFLM 54
Q+ RQK+++ NIAN TP Y++KD+ FE+ L +
Sbjct: 12 QLVEAALEGRVLRQKLIASNIANIDTPFYKSKDV-DFESALIAKKNEIYSKNSGEPKLEL 70
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A T+E H D + A + L + NTV + E + G + +
Sbjct: 71 AVTNEKHFPALDF-PSNKQATIY---LRDGHTARNDANTVDLDVETTELGKNALMVQALD 126
Query: 115 KLIKKLNSMVMHVV 128
KK + V+
Sbjct: 127 SASKKHGEIFKSVI 140
>gi|183220164|ref|YP_001838160.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189910284|ref|YP_001961839.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167774960|gb|ABZ93261.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778586|gb|ABZ96884.1| Flagellar basal-body rod protein FlgB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 143
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR----------- 56
+ + ++R+K++++NIANA PN++ ++ FE++L + +
Sbjct: 12 DLLERGLGAATQRRKVITDNIANADVPNFKRSEVV-FESMLKRAIESEKIEKEKAVPTKI 70
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+++ H++ L + + LD T ++ GN V I E+ ++ + Y L
Sbjct: 71 SNDRHIEF--FKPLDYRDAKPKTNLDYLTTMRPDGNNVDIEKEVVEANQNQMSYSLMIDR 128
Query: 117 IKKLNSMVMHVVR 129
+ + N ++ V+R
Sbjct: 129 LNQNNRLLNIVMR 141
>gi|157959905|ref|YP_001499939.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
700345]
gi|157844905|gb|ABV85404.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
700345]
Length = 116
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ++ ER K+++ N+ANA TP Y+A+D+ F ++ Q
Sbjct: 9 LGVHPHTLDFRVERSKMLAGNLANAETPGYKARDL-DFNAVMTQ---------------L 52
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+SG+ N + NTV ++ E + Y+ + + S +
Sbjct: 53 NSGMTPNQD-YQVGYRIPHQTSADQNTVELSLEQARYSQNSMDYQTSLTFLNMKISGLRT 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|167750733|ref|ZP_02422860.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702]
gi|167656412|gb|EDS00542.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702]
gi|291532067|emb|CBK97652.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum 70/3]
gi|291558196|emb|CBL35313.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum V10Sc8a]
Length = 127
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F+I Q + L ++Q+I+++NIAN TP Y K + F +L + +
Sbjct: 7 NAFRITEQGLSVLWQKQQIIAQNIANQDTPGYNCKYL-DFYAVLKDRME----STSVVGG 61
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
G D T Q GN V + ++ + ++ Y+ + + +
Sbjct: 62 KAKEGSKQVELATRVYEDTATNTQPDGNNVDVDSQSNELAKVQLHYQALKNQMNGEFTRL 121
Query: 125 MHVVR 129
++
Sbjct: 122 RSAMK 126
>gi|238916743|ref|YP_002930260.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC
27750]
gi|238872103|gb|ACR71813.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC
27750]
Length = 130
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ A+ R+++++ NIAN TPNY+ +D+ F + L + + L + +
Sbjct: 10 NLLKSAADASWTREEVLTNNIANVDTPNYKRQDVE-FSSFLANALQRSGKSTSSLTQRVN 68
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ + + + + T + GN V ++ E + + Y + S V
Sbjct: 69 NVNYNDLSIRTYTDNSTLSYRTDGNNVDLSTENVELASEQINYNALIDSMNNEFSRFKSV 128
Query: 128 VR 129
++
Sbjct: 129 LK 130
>gi|332702981|ref|ZP_08423069.1| flagellar basal-body rod protein FlgB [Desulfovibrio africanus str.
Walvis Bay]
gi|332553130|gb|EGJ50174.1| flagellar basal-body rod protein FlgB [Desulfovibrio africanus str.
Walvis Bay]
Length = 167
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
++ + + +RQ +V NI+N +TPNY+ + + FE L + MART E H
Sbjct: 41 ELTKKVMDLRLQRQNLVIANISNINTPNYKPRRL-DFEEKLQKALDIDSRGKMARTDENH 99
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + ++ E G +V + E+ LY+ ++L K+
Sbjct: 100 VPTAFNAKGFSGDWEKEFKPRAEHGQD----SVDLDKEMAILSKNNMLYDALSQLTKEGY 155
Query: 122 SMVMHVV 128
+ V+
Sbjct: 156 KGINKVI 162
>gi|291278934|ref|YP_003495769.1| flagellar basal-body rod protein FlgB [Deferribacter desulfuricans
SSM1]
gi|290753636|dbj|BAI80013.1| flagellar basal-body rod protein FlgB [Deferribacter desulfuricans
SSM1]
Length = 134
Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR------THETH 61
S + S + K++SENIAN TP Y+AK + F+ + + T++ H
Sbjct: 10 DKLSYALDVTSYKNKVISENIANVDTPFYKAKKL-DFKDAMQDVMGTGKKLPLKVTNKYH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + N + V+ GN V + E+ + L+ + +++
Sbjct: 69 ISGSSENFSVSNYVKYQN----NMSVRNDGNDVNLDYEMSELAANGILFNMLSQITGYEF 124
Query: 122 SMVMHVVRG 130
+ + ++G
Sbjct: 125 TRLKTSIQG 133
>gi|219684621|ref|ZP_03539564.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
gi|219671983|gb|EED29037.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
Length = 135
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN--------FLMARTHE 59
+ ++ + LS RQ ++S+NIAN TPN++ I SFE+ L + + ++ +
Sbjct: 9 DFSHRYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFSNKGKNDLSLIKSSD 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL + + + LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHLSG-LKNPEYSDVKPHRV-LDHFSTMNNNGNNVDIDSEIKALVQNQMMYSLMTNVQAH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|302670715|ref|YP_003830675.1| flagellar basal-body rod protein FlgB [Butyrivibrio proteoclasticus
B316]
gi|302395188|gb|ADL34093.1| flagellar basal-body rod protein FlgB [Butyrivibrio proteoclasticus
B316]
Length = 131
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 3/125 (2%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + + A+ R ++++ NIAN TP Y+ +D+ +FE L + +R K
Sbjct: 8 DYINVLDKAADASWLRNEVIANNIANVDTPGYKRQDL-NFEDELERALGNSRYVTMDAKV 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ VI ++ N V I E + Y+ +K S +
Sbjct: 67 AGLKERELRPRVIND--YSNFSYRLDKNNVDIDTENVTLAANQIKYQGLMAGLKSEFSNL 124
Query: 125 MHVVR 129
+
Sbjct: 125 QAACK 129
>gi|296127541|ref|YP_003634793.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM
12563]
gi|296019357|gb|ADG72594.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM
12563]
Length = 142
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHET 60
+A + N R +++++NIAN STPN++ D++ FE L + RT
Sbjct: 15 VAKKLLNVYGLRAEVIADNIANVSTPNFKRSDVT-FEYQLARALDSEKYDGMEAKRTDSR 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H +++ +D T + N V I E+ + Y++ T+++
Sbjct: 74 HFPF--HMPMNYQDVAPTLTVDYDTSYRNDKNNVDIDKEMAEEAKNTLRYQMFTQIVNAQ 131
Query: 121 NS 122
Sbjct: 132 YR 133
>gi|150390490|ref|YP_001320539.1| flagellar basal-body rod protein FlgB [Alkaliphilus metalliredigens
QYMF]
gi|149950352|gb|ABR48880.1| flagellar basal-body rod protein FlgB [Alkaliphilus metalliredigens
QYMF]
Length = 136
Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE--THLKES 65
+ + + R + +S NIANA+TPN++ K FET L TH+K
Sbjct: 10 NLLNSAMSASWVRNEAISNNIANANTPNFK-KSTVEFETHLKNALQGNSVSGERTHVKHI 68
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ + + GN V I E+ + + ++ + I +
Sbjct: 69 AIGAERVEEVKYKVRSHEGYRTRRDGNNVDIDVEMAELAKNQVIFNTLSTQINNEFRRIK 128
Query: 126 HVV 128
+
Sbjct: 129 TAI 131
>gi|145297452|ref|YP_001140293.1| lateral flagellar basal body protein, LfgB [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142850224|gb|ABO88545.1| lateral flagellar basal body protein, LfgB [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 129
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + ++R +I++ N+AN TP Y A+D+ ++TIL + T + +
Sbjct: 9 LGVHPYALDVRADRARILAGNLANVDTPGYLARDV-DYKTILGRVAQQVATGD---ASAS 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S + V + GNT ++ E K + ++ + + + +
Sbjct: 65 ISQGVMANDMQHPLYRIPYQVSMDGNTAELSVEQSKFANNATDFQTSLTFLNMKITGIAK 124
Query: 127 VVRG 130
+ G
Sbjct: 125 AIEG 128
>gi|254255084|ref|ZP_04948401.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
gi|124899729|gb|EAY71572.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
Length = 160
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 15/124 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + +ER +I++ N+AN +TP ++A+DI F L +
Sbjct: 49 GVHAAALKVRTERTRILASNLANGATPGFQARDI-DFRASLERML-------------TD 94
Query: 68 SGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
AH +AP + V GNTV + E ++ + + +
Sbjct: 95 DAFAAAAHGGDAPKYRVPSRPSVDGNTVELGVEQAAFAQNAADFQASLTFLNMKIKGLRA 154
Query: 127 VVRG 130
+ G
Sbjct: 155 AITG 158
>gi|87307388|ref|ZP_01089533.1| probable flagellar basal-body rod protein FlgB [Blastopirellula
marina DSM 3645]
gi|87290128|gb|EAQ82017.1| probable flagellar basal-body rod protein FlgB [Blastopirellula
marina DSM 3645]
Length = 137
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ Q N+ R +++ NIAN TP Y+ +D++ + + + ++ + S
Sbjct: 13 MLEQVLNFSQSRHNLLAGNIANLDTPGYKVRDLNVDKFQMKLREAIEEKNKPNEPLSPGL 72
Query: 69 GLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ + + D G+ + VGI ++ + + ++ + L+++ ++
Sbjct: 73 VSTRESDPMRSVRDSLPGILFHDESNVGIEQQVMEISKNQIMHNMAISLMEQQMRLLQTA 132
Query: 128 V 128
+
Sbjct: 133 I 133
>gi|283853238|ref|ZP_06370489.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. FW1012B]
gi|283571343|gb|EFC19352.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. FW1012B]
Length = 136
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHET 60
+ + + ERQ +V N+AN P+Y+A + FE L M RT
Sbjct: 9 LGLLGKVMDLRLERQNVVMSNLANQDVPSYKAHRLE-FEKELQSALNTDGDRKMTRTGSG 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL + +G +E + +V + E+ +Y T + KK
Sbjct: 68 HLPSTFRAGGFS--GTMEMGWKPQVVAGLD--SVDMEKEMSIMAKNTLMYNALTDITKKD 123
Query: 121 NSMVMHVVR 129
+ V+
Sbjct: 124 FEGLQRVIT 132
>gi|74101655|gb|AAZ99745.1| FlgBL [Aeromonas hydrophila]
Length = 129
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + ++R +I++ N+AN TP Y A+D+ ++TIL + T + +
Sbjct: 9 LGVHPYALDVRADRARILAGNLANVDTPGYLARDV-DYKTILGRVAQQVATGD---ASAA 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S + V + GNT ++ E K + ++ + + + +
Sbjct: 65 ISQGVMANDMQHPLYRIPYQVSMDGNTAELSVEQSKFANNATDFQTSLTFLNMKITGIAK 124
Query: 127 VVRG 130
+ G
Sbjct: 125 AIEG 128
>gi|222095367|ref|YP_002529427.1| flagellar basal body rod protein flgb [Bacillus cereus Q1]
gi|221239425|gb|ACM12135.1| flagellar basal-body rod protein FlgB [Bacillus cereus Q1]
Length = 172
Score = 67.3 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ LK +
Sbjct: 45 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNTADLKTNADLY 103
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 104 QTNEMHLPTVNAKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 163
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 164 A-INQAARG 171
>gi|317129212|ref|YP_004095494.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
DSM 2522]
gi|315474160|gb|ADU30763.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
DSM 2522]
Length = 134
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLKES 65
+ + R +++NIAN TPNY+AK + F LN R + T +
Sbjct: 10 SLLETALSASMTRHNTIAQNIANVDTPNYKAKK-AVFSHELNSAMNNQRLAANRTDARHI 68
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKKLNSMV 124
+ S + V + T +GN V + E+ + + Y L ++ + NS+
Sbjct: 69 EFSSRNSTDEV-QVIERNNTQYNHNGNNVDVDLEMAELAKNQIYYNTLIDRMNGRFNSIR 127
Query: 125 MHVVRG 130
+ +G
Sbjct: 128 TAIGQG 133
>gi|51598554|ref|YP_072742.1| flagellar basal body rod protein FlgB [Borrelia garinii PBi]
gi|51573125|gb|AAU07150.1| flagellar basal-body rod protein [Borrelia garinii PBi]
Length = 135
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN--------FLMARTHE 59
+ ++ + LS RQ ++S+NIAN TPN++ I SFE+ L + + ++ +
Sbjct: 9 DFSHRYLDVLSLRQGVISDNIANVDTPNFKRSRI-SFESELEKAFLNKGKNDLSLIKSSD 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
HL + + + LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHLSG-LKNPEYSDVKPHRV-LDHFSTMNNNGNNVDIDSEIKALVQNQMMYHLMTNI 122
>gi|218133657|ref|ZP_03462461.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
43243]
gi|217991032|gb|EEC57038.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
43243]
Length = 131
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ A+ R ++++ NIAN TP Y+ KD+ SFE LN + L +
Sbjct: 11 DVLNKAADNSWLRNEVLTNNIANVDTPGYKRKDV-SFEKYLNSALEAPENPYSTLNQRVK 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
H T + N V I E + + +Y + S + V
Sbjct: 70 HADLDTVHSQVYTDYSTLSYRSDRNNVDIETEQSELASNQLVYNALIDSMNNEFSRIKMV 129
Query: 128 V 128
+
Sbjct: 130 I 130
>gi|225619784|ref|YP_002721041.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae
WA1]
gi|225214603|gb|ACN83337.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae
WA1]
Length = 142
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHET 60
+A + N R +++++NIAN STPN++ D++ FE L + RT
Sbjct: 15 VAKKLLNVYGLRAEVIADNIANVSTPNFKRSDVT-FEYQLARALDSENYNGMEAKRTDSR 73
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + + +D T + N V I E+ + Y++ T+++
Sbjct: 74 HFPF--HMPMDYKQVSPTITVDYDTSYRNDKNNVDIDKEMAEEAKNTLRYQMFTQIVNAQ 131
Query: 121 NS 122
Sbjct: 132 YR 133
>gi|224370790|ref|YP_002604954.1| FlgB [Desulfobacterium autotrophicum HRM2]
gi|223693507|gb|ACN16790.1| FlgB [Desulfobacterium autotrophicum HRM2]
Length = 136
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHET 60
+++ S + + R +++ NIAN T Y KD+ F+ L + ++RT
Sbjct: 11 YEVLSTSLDVSARRHNLITGNIANMDTIGYEPKDL-DFQKTLKRAMAEEPPDKISRTDAR 69
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H + + + + V + +V I E+ Y T+L+ +
Sbjct: 70 HFSGAGQTSMSMDGSVSQDVDIHHLD------SVNIDTEMANLVENNIKYRTTTELLLRK 123
Query: 121 NSMVMHVVR 129
+ + H ++
Sbjct: 124 MATLRHAIQ 132
>gi|220904842|ref|YP_002480154.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869141|gb|ACL49476.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 137
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETH 61
+ N +RQ I++ N+AN TPNY+ +++ SFE L M+RT H
Sbjct: 10 GLVGTVMNMQLDRQNIIAGNLANIDTPNYKPREL-SFEKELQTALGQDMEGQMSRTSAEH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + G V + E+ K + + +++ K
Sbjct: 69 IPSTFDPSSFRPEWSEAFKPRLIHGEDR----VNLDKEMAKHSKNQLQFTALAQVLTKTF 124
Query: 122 SMVMHVVR 129
+ V++
Sbjct: 125 EGIHTVIQ 132
>gi|261341497|ref|ZP_05969355.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
ATCC 35316]
gi|288316293|gb|EFC55231.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
ATCC 35316]
Length = 116
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q R +++S N+AN TPN++AKDI F + ++ + D
Sbjct: 9 LGVHPQAVALRLSRAELLSANLANVDTPNFQAKDI-DFAAEMQRS------------QRD 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ P GNTV + E + Y+++ + + +
Sbjct: 56 FFPGSAPQEMYRVP----YQPSSDGNTVALDVEQAEFSKNVQDYQMSLAFLNMKFTGLKK 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|160880852|ref|YP_001559820.1| flagellar basal-body rod protein FlgB [Clostridium phytofermentans
ISDg]
gi|160429518|gb|ABX43081.1| flagellar basal-body rod protein FlgB [Clostridium phytofermentans
ISDg]
Length = 128
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ A+ RQ+++S N+AN TPNY+ KD+ +FE+ L + + + +++
Sbjct: 11 NMLNKAADASVIRQELLSNNLANNDTPNYKRKDL-NFESYLKKELKGDEDLDKRVAKANL 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK-YLYELNTKLIKKLNSMVMH 126
S L + + A L + GN V + E + Y L + ++ + M
Sbjct: 70 SKLDGSIYTDRANLS----YRYDGNNVDVDVEEGYVAENQIRYYTLLQTMTEEFQRLRMV 125
Query: 127 VVR 129
+ R
Sbjct: 126 LSR 128
>gi|153953775|ref|YP_001394540.1| flagellar basal body rod protein FlgB [Clostridium kluyveri DSM
555]
gi|219854391|ref|YP_002471513.1| hypothetical protein CKR_1048 [Clostridium kluyveri NBRC 12016]
gi|146346656|gb|EDK33192.1| FlgB [Clostridium kluyveri DSM 555]
gi|219568115|dbj|BAH06099.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 133
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMARTHETHLKESD 66
+ + + SER K +S+N+AN +T Y+ K ++ E++ + N + E H+K
Sbjct: 15 LLKKGLDAASERSKAISDNLANVNTAGYKRKYVTFEESLKDSVYNLELKTDDEKHIK--- 71
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ N IE D + ++ GN V + E+ +Y + SM +
Sbjct: 72 ---IGSNYGQIETKTDSSNSMREDGNNVDMDTEIVNQAANTLMYSALVNQMNSRLSMERY 128
Query: 127 VVRG 130
V+ G
Sbjct: 129 VISG 132
>gi|283784082|ref|YP_003363947.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
gi|282947536|emb|CBG87088.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
Length = 115
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI + M R T++
Sbjct: 9 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-------DFAAEMQRASRTNV---- 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
++ GNTV + E + Y+ + + S +
Sbjct: 58 -------MPEVDVKYRVPMQPSEDGNTVELNTEQARFSQNSMDYQSSLTFLNLQISGIKE 110
Query: 127 VVRG 130
+ G
Sbjct: 111 AIEG 114
>gi|303248349|ref|ZP_07334610.1| flagellar basal-body rod protein FlgB [Desulfovibrio fructosovorans
JJ]
gi|302490257|gb|EFL50171.1| flagellar basal-body rod protein FlgB [Desulfovibrio fructosovorans
JJ]
Length = 136
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 11/127 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHETH 61
+ + + ERQ +V N++N P Y+A+ + FE L + RT H
Sbjct: 10 DLLGKVLDLRLERQNVVMSNLSNQDVPAYKARRLE-FENELQSALGLETEGKLTRTGSKH 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L + S A +E + +V + E+ +Y T++ KK
Sbjct: 69 LSQKFSPATFTGA--LEMGWKPRVVAGLD--SVDMDKEMSIMAKNTLMYNALTEITKKGF 124
Query: 122 SMVMHVV 128
+ V+
Sbjct: 125 EGLQKVL 131
>gi|111115119|ref|YP_709737.1| flagellar basal body rod protein FlgB [Borrelia afzelii PKo]
gi|216263868|ref|ZP_03435862.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
gi|110890393|gb|ABH01561.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
gi|215979912|gb|EEC20734.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
Length = 135
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL + L S
Sbjct: 9 DFSHRYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFLNK--DKNDLNLIKS 65
Query: 68 SGLHWNAHVIE--------APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S H +A LD + + +GN V I +E+ + +Y L T +
Sbjct: 66 SDKHLSALKNPEYSDIKPHRVLDHFSTMNNNGNNVDIDSEIKALVQNQMMYHLMTNVQAH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|260779350|ref|ZP_05888242.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605514|gb|EEX31809.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 120
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ N+ +R K+++ N+AN TP Y AKD+ SF T++NQ
Sbjct: 7 NALGVHPDALNFRVQRTKVLASNLANVDTPGYLAKDL-SFTTVMNQLSPHGVNKP----- 60
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + GNTV + E K ++ + + +
Sbjct: 61 -------VPKLQVSSMYSIPYQNSKDGNTVELGVEQGKFTQNNMDFQTSLTFLNMKFQGL 113
Query: 125 MHVVRG 130
V+ G
Sbjct: 114 AKVIEG 119
>gi|240145510|ref|ZP_04744111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
L1-82]
gi|257202325|gb|EEV00610.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
L1-82]
gi|291535999|emb|CBL09111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
M50/1]
gi|291538493|emb|CBL11604.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
XB6B4]
Length = 131
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 4/132 (3%)
Query: 1 MQPITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
M F I + A+ R+ +++ NIAN TP Y+ +D+ FE++L + +
Sbjct: 1 MFTTNVFDYTNILDKAADASWMRENVITNNIANIDTPGYKRQDV-DFESVLQKALGKTKY 59
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
K + + ++ N V E + Y+L T I
Sbjct: 60 SSLDKKVRELNQDLGKLTTTSYTDAANYSYRLDRNNVDENTENAELASESLRYQLLTTAI 119
Query: 118 KKLNSMVMHVVR 129
S + V++
Sbjct: 120 TNNFSRMQTVLK 131
>gi|242309756|ref|ZP_04808911.1| flagellar basal-body rod protein flgb proximal rod protein
[Helicobacter pullorum MIT 98-5489]
gi|239523757|gb|EEQ63623.1| flagellar basal-body rod protein flgb proximal rod protein
[Helicobacter pullorum MIT 98-5489]
Length = 144
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--RTHETHLKES 65
+A + ++ S R+ ++S NIAN STP YR KDI +FE ++ + R+ + L +
Sbjct: 11 GLAQEALDYRSLRRDMISSNIANVSTPMYRPKDI-NFEQMMAKKADEVFNRSKDMTLDLA 69
Query: 66 DSSGLH------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++ H + + GN+V + E + +Y+ ++K
Sbjct: 70 LTNSNHLLPLEEMDLSRTTMFYRDGHLARNDGNSVDLDIETSEMAKNDIMYQALVGALRK 129
Query: 120 LNSMVMHVV 128
+ + +
Sbjct: 130 QGGIFSNAI 138
>gi|227873379|ref|ZP_03991638.1| possible flagellar basal body rod protein [Oribacterium sinus
F0268]
gi|227840782|gb|EEJ51153.1| possible flagellar basal body rod protein [Oribacterium sinus
F0268]
Length = 129
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 4/121 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ + + L RQ + NIAN TPNY++K ++ FE L T E ++ +
Sbjct: 11 LTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLT-FENEL---LHRISTAEQGGRKKVAI 66
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G + + ++ GN V + E + Y Y+ + +M
Sbjct: 67 GNAIQSQRARIHSTKNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDLRRLMAAA 126
Query: 129 R 129
+
Sbjct: 127 K 127
>gi|327478806|gb|AEA82116.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri DSM
4166]
Length = 104
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+R +I++ N+AN TP ++A+DI F + + L + SS L
Sbjct: 4 QRSEILAANLANEDTPGFQARDI-DFGAEMQR-----------LDDGASSRLSIAGSDPR 51
Query: 79 APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
T GNTV ++ E + ++ + + + + G
Sbjct: 52 MLYRVPTQASQDGNTVELSVEQAQFSRNSMDFQTSLTFLTMKFRGLKQAIEG 103
>gi|22127331|ref|NP_670754.1| flagellar basal body rod protein FlgB [Yersinia pestis KIM 10]
gi|45442793|ref|NP_994332.1| flagellar basal body rod protein FlgB [Yersinia pestis biovar
Microtus str. 91001]
gi|51597640|ref|YP_071831.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
IP 32953]
gi|150260252|ref|ZP_01916980.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
gi|162418530|ref|YP_001604850.1| flagellar basal body rod protein FlgB [Yersinia pestis Angola]
gi|165924854|ref|ZP_02220686.1| flagellar basal body rod protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939094|ref|ZP_02227646.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008908|ref|ZP_02229806.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211973|ref|ZP_02238008.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399263|ref|ZP_02304787.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167418726|ref|ZP_02310479.1| flagellar basal body rod protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425212|ref|ZP_02316965.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167466344|ref|ZP_02331048.1| flagellar basal-body rod protein FlgB [Yersinia pestis FV-1]
gi|186896774|ref|YP_001873886.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
PB1/+]
gi|218927909|ref|YP_002345784.1| flagellar basal body rod protein FlgB [Yersinia pestis CO92]
gi|229837405|ref|ZP_04457568.1| Flagellar basal-body rod protein flgB [Yersinia pestis Pestoides A]
gi|229840618|ref|ZP_04460777.1| Flagellar basal-body rod protein flgB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842831|ref|ZP_04462983.1| Flagellar basal-body rod protein flgB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900942|ref|ZP_04516066.1| Flagellar basal-body rod protein flgB [Yersinia pestis Nepal516]
gi|270487676|ref|ZP_06204750.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
gi|294502785|ref|YP_003566847.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|21960412|gb|AAM87005.1|AE013948_13 putative flagellar rod protein [Yersinia pestis KIM 10]
gi|45437659|gb|AAS63209.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Microtus str. 91001]
gi|51590922|emb|CAH22578.1| putative flagellar basal-body rod protein [Yersinia
pseudotuberculosis IP 32953]
gi|115346520|emb|CAL19396.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
gi|149289660|gb|EDM39737.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
gi|162351345|gb|ABX85293.1| flagellar basal-body rod protein FlgB [Yersinia pestis Angola]
gi|165913050|gb|EDR31675.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923054|gb|EDR40205.1| flagellar basal body rod protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992247|gb|EDR44548.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166206719|gb|EDR51199.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962720|gb|EDR58741.1| flagellar basal body rod protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051767|gb|EDR63175.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055975|gb|EDR65756.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|186699800|gb|ACC90429.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
PB1/+]
gi|229682281|gb|EEO78373.1| Flagellar basal-body rod protein flgB [Yersinia pestis Nepal516]
gi|229690098|gb|EEO82155.1| Flagellar basal-body rod protein flgB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696984|gb|EEO87031.1| Flagellar basal-body rod protein flgB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705528|gb|EEO91538.1| Flagellar basal-body rod protein flgB [Yersinia pestis Pestoides A]
gi|262360817|gb|ACY57538.1| flagellar basal body rod protein [Yersinia pestis D106004]
gi|262364762|gb|ACY61319.1| flagellar basal body rod protein [Yersinia pestis D182038]
gi|270336180|gb|EFA46957.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
gi|294353244|gb|ADE63585.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|320016714|gb|ADW00286.1| Flagellar basal-body rod protein flgB [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 148
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------FLMARTHE 59
+ R +++S N+AN +TPN++AKDI F + + R+
Sbjct: 9 LGVHPMAMQLRLTRAELLSANLANVNTPNFQAKDI-DFAAEMQRAKRGNGVMAAPDRSSA 67
Query: 60 THLKESDSSGLHWNAHVIEAP---------LDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
L SS + ++ +P + GNTV + E + Y
Sbjct: 68 QMLSTQMSSAQMSSPQMMSSPQIMSSPQIKYRLPYQPSLDGNTVALNVEQAEFSKNALDY 127
Query: 111 ELNTKLIKKLNSMVMHVVRG 130
+ + + + + + G
Sbjct: 128 QTSLSFLNMKLTGLKQAIEG 147
>gi|331005437|ref|ZP_08328816.1| flagellar basal body protein [gamma proteobacterium IMCC1989]
gi|330420713|gb|EGG95000.1| flagellar basal body protein [gamma proteobacterium IMCC1989]
Length = 130
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
++ + L R +++S NIAN STP Y AK + SFE L N M T + +
Sbjct: 11 KVVMTALDGLLLRHQVISHNIANVSTPGYSAKTV-SFEQFL-TNMSMDATSPS----QKN 64
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S + + + + ++ + + +GN V + E+ + Y + K ++
Sbjct: 65 SLTNAMSEIRDLIKEKDSLIVSTGNKVELDKEMVQLTENVLKYRALLEANSKRGDILAMA 124
Query: 128 VRG 130
VRG
Sbjct: 125 VRG 127
>gi|224417698|ref|ZP_03655704.1| flagellar basal body rod protein FlgB [Helicobacter canadensis MIT
98-5491]
gi|253827047|ref|ZP_04869932.1| flagellar basal body rod protein [Helicobacter canadensis MIT
98-5491]
gi|313141241|ref|ZP_07803434.1| flagellar basal body rod protein FlgB [Helicobacter canadensis MIT
98-5491]
gi|253510453|gb|EES89112.1| flagellar basal body rod protein [Helicobacter canadensis MIT
98-5491]
gi|313130272|gb|EFR47889.1| flagellar basal body rod protein FlgB [Helicobacter canadensis MIT
98-5491]
Length = 144
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-RTHETHLKESD 66
+A + ++ S R+ +++ NIAN STP YR KDI+ + + N+ + R + L +
Sbjct: 11 GLAQEALDYRSLRRDMIAGNIANVSTPMYRPKDINFEQMMANKADEIFNRNRKMELDLAL 70
Query: 67 SSGLH------WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
++ H + + + GN+V + E + +Y+ ++K
Sbjct: 71 TNSNHLLPLEDLDKNRSTFFYRDGHLARNDGNSVDLDIETSEMAKNDIMYQALVGALRKQ 130
Query: 121 NSMVMHVV 128
+ + +
Sbjct: 131 GGIFSNAI 138
>gi|157147105|ref|YP_001454424.1| hypothetical protein CKO_02882 [Citrobacter koseri ATCC BAA-895]
gi|157084310|gb|ABV13988.1| hypothetical protein CKO_02882 [Citrobacter koseri ATCC BAA-895]
Length = 116
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q R +++S N+AN TPN++AKDI F + +
Sbjct: 9 LGVHPQAVALRLSRAELLSANLANVDTPNFQAKDI-DFAAEMQR---------------- 51
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
SS N + GNTV + E + Y+++ + + +
Sbjct: 52 SSWSFSNPSAPQEMYRVPYQPSSDGNTVALNVEQAEFAKNTQDYQMSLAFLNMKFTGLKK 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|218778519|ref|YP_002429837.1| flagellar basal-body rod protein FlgB [Desulfatibacillum
alkenivorans AK-01]
gi|218759903|gb|ACL02369.1| Flagellar basal-body rod protein FlgB [Desulfatibacillum
alkenivorans AK-01]
Length = 127
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 22/123 (17%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-----MARTHETHLKESD 66
+ + +RQ ++S N+AN TP+Y AKD+ F L + ++RTH H +
Sbjct: 16 RSLDISRKRQGLISGNLANIETPDYHAKDL-DFRESLQKAMQGGSKDLSRTHSKHYNVME 74
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT-KLIKKLNSMVM 125
S V I E+ +Y + L++K +++
Sbjct: 75 GSSPEITTAAKAG--------------VDIDQEMANLAENNLMYRSSVESLLRKF-ALIK 119
Query: 126 HVV 128
+ +
Sbjct: 120 YAI 122
>gi|291519600|emb|CBK74821.1| flagellar basal-body rod protein FlgB [Butyrivibrio fibrisolvens
16/4]
Length = 132
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--RTHETHLKESDSSGL 70
A+ RQ ++ N+AN TP Y+ KDI F ++L + + RT + + D +G
Sbjct: 16 AADASWRRQTLILNNLANDDTPGYKRKDIE-FGSVLKKELMETHERTLDRAVNVLDDNGN 74
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL-NTKLIKKLNS 122
H + E + ++ GN V E + + Y+ T + +
Sbjct: 75 HVDG--YEYIDYENYSYRLDGNNVDPDTENVELASEQLRYQAYTTSISNEFER 125
>gi|229826299|ref|ZP_04452368.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
49176]
gi|229789169|gb|EEP25283.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
49176]
Length = 131
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 6/120 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F + + A+ R ++S NIAN TP Y+ KD+ FE+ L + + +
Sbjct: 8 NFINVLGKAADASWLRNNLISNNIANNDTPGYKRKDVQ-FESYLAMELIRGGSLRHRVAN 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK-YLYELNTKLIKKLNSM 123
+D L A+ A L + GN V I E + Y L + ++ + +
Sbjct: 67 ADLDRLDGIAYTDYASLS----YRADGNNVDIHTENTYLAENQIRYYTLLDSMTQEFSRL 122
>gi|239909137|ref|YP_002955879.1| flagellar basal-body rod protein FlgB [Desulfovibrio magneticus
RS-1]
gi|239799004|dbj|BAH77993.1| flagellar basal-body rod protein FlgB [Desulfovibrio magneticus
RS-1]
Length = 136
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------MARTHET 60
+ + + ERQ +V N+AN P ++A+ + FE L M RT
Sbjct: 9 LGLLGKVMDLHQERQNVVMSNLANQDVPAFKARTLE-FEQELQAALNIDGRGKMTRTQGG 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H+ + + + + I+ + +V + E+ +Y T + KK
Sbjct: 68 HM-PTVFNAAGFEGN-IDMGWKPRVVQGLD--SVDMDKEMAVMAKNTLMYNALTDITKKS 123
Query: 121 NSMVMHVV 128
+ V+
Sbjct: 124 FEGLQKVI 131
>gi|228958023|ref|ZP_04119759.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228801648|gb|EEM48529.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 166
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 39 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 97
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 98 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 157
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 158 A-INQAARG 165
>gi|327399356|ref|YP_004340225.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
gi|327181985|gb|AEA34166.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
Length = 132
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETH 61
+ F + + RQ +++ NIANA TPNY+AK I F IL + + +E H
Sbjct: 7 STFNYLKYGLDVANLRQDLIASNIANADTPNYKAKHI-PFNDILKLRQNDLKLKVDNEKH 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK-KL 120
+K + V V+ N V + EL + T + K
Sbjct: 66 IKPKEDLDYIVKKDV------DDYLVKNDQNNVKLDKELTYLAKNTLIINTLTAFERYKF 119
Query: 121 N 121
N
Sbjct: 120 N 120
>gi|170021363|ref|YP_001726317.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC 8739]
gi|169756291|gb|ACA78990.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC 8739]
Length = 111
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 9 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 52
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N V++ GNTV + +E + Y+ + + S +
Sbjct: 53 ------NNAVVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 106
Query: 127 VVRG 130
+ G
Sbjct: 107 AIEG 110
>gi|51894142|ref|YP_076833.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
14863]
gi|51857831|dbj|BAD41989.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
14863]
Length = 119
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 15/122 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+I Q + S RQ++++ N+ANA TP ++ + FET L +
Sbjct: 9 RIVEQAIDAASLRQRVLANNLANAMTPGFKRSRV-DFETELARALAK------------- 54
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G + + + + GN V + E K + Y T+ I + V
Sbjct: 55 -GGDPDQVRPTVVRETDSIGRPDGNNVDVEAESVKMAANQIWYAALTRQINDHFDRLRMV 113
Query: 128 VR 129
+
Sbjct: 114 IT 115
>gi|27904801|ref|NP_777927.1| flagellar basal-body rod protein Flgb [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|46395819|sp|Q89AI0|FLGB_BUCBP RecName: Full=Flagellar basal-body rod protein flgB
gi|27904199|gb|AAO27032.1| flagellar basal-body rod protein Flgb [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 136
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 6/129 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F I N + RQ+I++ NIANA+TP +++ DI +F + F A + + +
Sbjct: 9 FNINKILLNLHAYRQEILASNIANANTPGHKSSDI-NFSKTFGKLFSNALQGKKNNLTTT 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG-----NTVGITNELYKSGHIKYLYELNTKLIKKLN 121
S+ N +E V+ + N + I + H Y + I
Sbjct: 68 SNKHISNNDNVELSNYDEQTVKNNSYVSKNNAINIDVDRINFVHNGLKYNADVVFINNKF 127
Query: 122 SMVMHVVRG 130
+M+V++G
Sbjct: 128 KNIMNVLKG 136
>gi|42780836|ref|NP_978083.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 10987]
gi|42736756|gb|AAS40691.1| flagellar basal-body rod protein FlgB [Bacillus cereus ATCC 10987]
Length = 135
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ T LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNTTDLKTNADLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|195941352|ref|ZP_03086734.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi 80a]
gi|216264410|ref|ZP_03436402.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
gi|218249205|ref|YP_002374817.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
gi|221217697|ref|ZP_03589165.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
gi|224533198|ref|ZP_03673798.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
WI91-23]
gi|224533758|ref|ZP_03674346.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
CA-11.2a]
gi|225549095|ref|ZP_03770070.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
gi|225550185|ref|ZP_03771145.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
gi|226320595|ref|ZP_03796155.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 29805]
gi|226321612|ref|ZP_03797138.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi Bol26]
gi|1196315|gb|AAB51407.1| flagellar basal body rod protein [Borrelia burgdorferi]
gi|215980883|gb|EEC21690.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
gi|218164393|gb|ACK74454.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
gi|221192374|gb|EEE18593.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
gi|224511925|gb|EEF82326.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
WI91-23]
gi|224513051|gb|EEF83414.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
CA-11.2a]
gi|225369297|gb|EEG98750.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
gi|225370321|gb|EEG99759.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
gi|226232801|gb|EEH31554.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi Bol26]
gi|226234014|gb|EEH32735.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 29805]
gi|312148512|gb|ADQ31171.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi JD1]
gi|312149176|gb|ADQ29247.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi N40]
Length = 135
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--------MARTHE 59
+ ++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL + ++ +
Sbjct: 9 DFSHRYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFLNEDKNDLNLIKSSD 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL S L ++ LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHL--SGFKNLKYSDVKPHRVLDHFSTMNNNGNNVDIDSEVKALVQNQMMYHLMTNVQAH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|188492446|ref|ZP_02999716.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
gi|188487645|gb|EDU62748.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
Length = 121
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 19 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N V++ GNTV + +E + Y+ + + S +
Sbjct: 63 ------NNAVVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 116
Query: 127 VVRG 130
+ G
Sbjct: 117 AIEG 120
>gi|119384843|ref|YP_915899.1| flagellar basal body rod protein FlgC [Paracoccus denitrificans
PD1222]
gi|119374610|gb|ABL70203.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
Length = 130
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 4/122 (3%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
++ ++A + R + +SENIANA TP YR + + +F ++
Sbjct: 3 NSLSATELAVSGMKSQAVRLRHISENIANADTPGYR-RKLVAFREQVDFGRPTGAVTPG- 60
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
A SG+ V + E+ + YE N ++ ++
Sbjct: 61 --PPRFDRRELPRIHDPAHPMADEEGYYSGSNVDLIIEIADAKEAGRSYEANLRVFEQSR 118
Query: 122 SM 123
M
Sbjct: 119 QM 120
>gi|225552255|ref|ZP_03773195.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
gi|225371253|gb|EEH00683.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
Length = 135
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--------NFLMARTHE 59
+ ++ + LS RQ ++S+NIAN TPN++ I SFE+ L + N + ++ +
Sbjct: 9 DFSHRYLDVLSLRQSVISDNIANVDTPNFKRSKI-SFESELEKAFLNEDKNNLNLIKSSD 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL S L ++ LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHL--SGFKNLKYSDVKPHRVLDHFSTMNNNGNNVDIDSEVKALVQNQMMYHLMTNVQAH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|206974988|ref|ZP_03235903.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
gi|206747007|gb|EDZ58399.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
Length = 135
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNAADLKSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|120597302|ref|YP_961876.1| flagellar basal body rod protein FlgB [Shewanella sp. W3-18-1]
gi|146294553|ref|YP_001184977.1| flagellar basal body rod protein FlgB [Shewanella putrefaciens
CN-32]
gi|120557395|gb|ABM23322.1| flagellar basal-body rod protein FlgB [Shewanella sp. W3-18-1]
gi|145566243|gb|ABP77178.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
CN-32]
Length = 116
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q ++ ER K+++ N+ NA TP Y+A+D+ F+ + Q + ++
Sbjct: 9 LGIHPQTLDFRVERSKVLASNLINAETPGYKARDL-DFKAAMKQVEAGMQMNQQ------ 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
NTV + E + Y+ + + + +
Sbjct: 62 ----------YSLAYRMPYQNSADDNTVELGKEQARYSQNAMDYQTSLTFLNMKIAGLKS 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|228964726|ref|ZP_04125833.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228794976|gb|EEM42475.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 152
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 25 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 83
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 84 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVNAINTQY 143
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 144 A-INQAARG 151
>gi|15594639|ref|NP_212428.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi B31]
gi|223888689|ref|ZP_03623280.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b]
gi|1706829|sp|P52608|FLGB_BORBU RecName: Full=Flagellar basal-body rod protein flgB
gi|1165278|gb|AAA85617.1| FlgB [Borrelia burgdorferi]
gi|2688172|gb|AAC66654.1| flagellar basal-body rod protein (flgB) [Borrelia burgdorferi B31]
gi|223885505|gb|EEF56604.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b]
Length = 135
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--------MARTHE 59
+ ++ + LS RQ ++S+NIAN TPN++ I SFE+ L + FL + ++ +
Sbjct: 9 DFSHRYLDVLSLRQSVISDNIANIDTPNFKRSKI-SFESELEKAFLNEDKNDLNLIKSSD 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL S L ++ LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHL--SGFKNLKYSDVKPHRVLDHFSTMNNNGNNVDIDSEVKALVQNQMMYHLMTNVQAH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|47566126|ref|ZP_00237164.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
gi|47557043|gb|EAL15373.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
Length = 135
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNTADLKTNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|310641540|ref|YP_003946298.1| flagellar basal-body rod protein flgb [Paenibacillus polymyxa SC2]
gi|309246490|gb|ADO56057.1| Flagellar basal-body rod protein FlgB [Paenibacillus polymyxa SC2]
Length = 135
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 14/132 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ + RQ+++++NI+NA TP ++ ++ SFE +L Q T L+
Sbjct: 9 FQKLQAGVQAANTRQRVMADNISNADTPYFKRSEV-SFEELLQQQMDGDVTP---LRGKV 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTV--------GITNELYKSGHIKYLYELNTKLIK 118
++ H+ + + D T V G +V I E+ + Y + I
Sbjct: 65 TNSRHFQIGPVNSIPDAT--VIKDGYSVMNNNMNNVDIDREMSLMAENQLRYNTYIQEIN 122
Query: 119 KLNSMVMHVVRG 130
+ M+ V G
Sbjct: 123 ERIKMMRTAVEG 134
>gi|229149945|ref|ZP_04278173.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
gi|228633626|gb|EEK90227.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
Length = 147
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD---- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 21 SHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLYQ 79
Query: 67 SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
++ +H + ++ GN+V +T E+ LY ++ I +
Sbjct: 80 TNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA 139
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 140 -INQAARG 146
>gi|308068649|ref|YP_003870254.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa E681]
gi|305857928|gb|ADM69716.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa E681]
Length = 135
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 14/132 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ + RQ+++++NI+NA TP ++ ++ SFE +L Q T L+
Sbjct: 9 FQKLQAGVQAANTRQRVMADNISNADTPYFKRSEV-SFEELLQQQMDGDVTP---LRGKV 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTV--------GITNELYKSGHIKYLYELNTKLIK 118
++ H+ + + D T V G +V I E+ + Y + I
Sbjct: 65 TNSRHFQIGPVNSIPDAT--VTKDGYSVMNNNMNNVDIDREMSLMAENQLRYNTYIQEIN 122
Query: 119 KLNSMVMHVVRG 130
+ M+ V G
Sbjct: 123 ERIKMMRTAVEG 134
>gi|224532015|ref|ZP_03672647.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
gi|224511480|gb|EEF81886.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
Length = 135
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++ + LS RQ ++S+NIAN +TPN++ I SFE+ L + FL + L S
Sbjct: 9 DFSHRYLDVLSLRQSVISDNIANVNTPNFKRSKI-SFESELEKAFLNK--NRNDLNLIKS 65
Query: 68 SGLHWNAHVIEAPLDQT--------TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
S H + LD + + +GN V I +E+ + +Y L T +
Sbjct: 66 SDKHLSRLKNPEYLDIKPHRLLDHFSTMNNNGNNVDIDSEIKSLVQNQMMYHLMTNVQSH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|82544461|ref|YP_408408.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
gi|81245872|gb|ABB66580.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
gi|320186980|gb|EFW61693.1| Flagellar basal-body rod protein FlgB [Shigella flexneri CDC
796-83]
gi|332094098|gb|EGI99150.1| flagellar basal-body rod protein FlgB [Shigella boydii 3594-74]
Length = 109
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 25/123 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + N ++RQ++++ NIANA T Y+A+DI F + L + R + + +
Sbjct: 9 LRFQQEALNLRAQRQEVLAANIANADTLGYQARDI-DFASELKKVMQRGRDATSVVALTM 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+S H A + P + Y+++ + +M+
Sbjct: 68 TSTQHIPAQALTPPTAE------------------------LQYQMSLSALSGQIKGMMN 103
Query: 127 VVR 129
V++
Sbjct: 104 VLQ 106
>gi|228952123|ref|ZP_04114218.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229043497|ref|ZP_04191207.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
gi|229109200|ref|ZP_04238799.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
gi|229127069|ref|ZP_04256068.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
gi|229144355|ref|ZP_04272761.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
gi|228639142|gb|EEK95566.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
gi|228656422|gb|EEL12261.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
gi|228674210|gb|EEL29455.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
gi|228725875|gb|EEL77122.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
gi|228807655|gb|EEM54179.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 147
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 20 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 78
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 79 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 138
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 139 A-INQAARG 146
>gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
2.4.1]
gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
KD131]
gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter
sphaeroides 2.4.1]
gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
KD131]
Length = 128
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +++ + R + VSENIANA TP Y K + SF+ + + + T L
Sbjct: 7 LQSLGLSASGMRSQALRLRHVSENIANADTPGYHRKTV-SFQE--DPDSGLVSTGPVRLD 63
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S+ ++ H PL G G+ V + E+ + + YE N ++ + M
Sbjct: 64 RSELQKIYAPGH----PLAGEDGY-YDGSNVDLVVEIADAREAQRSYEANLRMFDQARQM 118
Query: 124 VMHVV 128
++
Sbjct: 119 TQSLL 123
>gi|126176159|ref|YP_001052308.1| flagellar basal body rod protein FlgB [Shewanella baltica OS155]
gi|304412511|ref|ZP_07394117.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
gi|307307170|ref|ZP_07586908.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
gi|125999364|gb|ABN63439.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS155]
gi|304349153|gb|EFM13565.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
gi|306910409|gb|EFN40840.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
Length = 116
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I Q ++ ER K+++ N+ NA TP Y+A+D+ F+ + Q + ++
Sbjct: 9 LGIHPQTLDFRVERSKVLASNLINAETPGYKARDL-DFKAAMKQVEAGMQMNQQ------ 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
NTV + E + Y+ + + + +
Sbjct: 62 ----------YNLAYRMPYQNSADDNTVELGKEQARYSQNAMDYQTSLTFLNMKIAGLKS 111
Query: 127 VVRG 130
+ G
Sbjct: 112 AIEG 115
>gi|228938857|ref|ZP_04101457.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971738|ref|ZP_04132359.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978347|ref|ZP_04138724.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
gi|228781364|gb|EEM29565.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
gi|228787828|gb|EEM35786.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820706|gb|EEM66731.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 147
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 20 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 78
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 79 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVNAINTQY 138
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 139 A-INQAARG 146
>gi|34497156|ref|NP_901371.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
ATCC 12472]
gi|34103013|gb|AAQ59376.1| probable flagellar basal-body rod protein flgB [Chromobacterium
violaceum ATCC 12472]
Length = 117
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + ++R ++++ NIAN +TP Y+A+DI F+ L +
Sbjct: 7 LSIHPEALRLRADRTRVLASNIANENTPGYQARDI-DFKAALA-------------SAAA 52
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S L ++ + GNTV ++ E + ++ + I +
Sbjct: 53 DSPLAFDDGGGDLLYRLPNHPSRDGNTVELSVEQAEFSQNVSEFQTSLTFINMKLHGLAK 112
Query: 127 VVRG 130
V+ G
Sbjct: 113 VIAG 116
>gi|228914322|ref|ZP_04077937.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228845316|gb|EEM90352.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 138
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLYQTNE 73
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ + LY ++ I + +
Sbjct: 74 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKVNQLYGISINAINTQYA-IN 132
Query: 126 HVVRG 130
RG
Sbjct: 133 QAARG 137
>gi|170681292|ref|YP_001742370.1| lateral flagellar rod protein LfgB [Escherichia coli SMS-3-5]
gi|260853463|ref|YP_003227354.1| putative lateral flagellar rod protein [Escherichia coli O26:H11
str. 11368]
gi|260866410|ref|YP_003232812.1| putative lateral flagellar rod protein [Escherichia coli O111:H-
str. 11128]
gi|306813307|ref|ZP_07447500.1| flagellar basal-body rod protein FlgB [Escherichia coli NC101]
gi|307136855|ref|ZP_07496211.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|307313522|ref|ZP_07593143.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
gi|170519010|gb|ACB17188.1| lateral flagellar rod protein LfgB [Escherichia coli SMS-3-5]
gi|257752112|dbj|BAI23614.1| predicted lateral flagellar rod protein [Escherichia coli O26:H11
str. 11368]
gi|257762766|dbj|BAI34261.1| predicted lateral flagellar rod protein [Escherichia coli O111:H-
str. 11128]
gi|305854070|gb|EFM54509.1| flagellar basal-body rod protein FlgB [Escherichia coli NC101]
gi|306906690|gb|EFN37201.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
gi|315059539|gb|ADT73866.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli W]
gi|315616830|gb|EFU97447.1| flagellar basal-body rod protein FlgB [Escherichia coli 3431]
gi|323158106|gb|EFZ44205.1| flagellar basal-body rod protein FlgB [Escherichia coli EPECa14]
gi|323171060|gb|EFZ56709.1| flagellar basal-body rod protein FlgB [Escherichia coli LT-68]
gi|323178497|gb|EFZ64075.1| flagellar basal-body rod protein FlgB [Escherichia coli 1180]
gi|323181544|gb|EFZ66964.1| flagellar basal-body rod protein FlgB [Escherichia coli 1357]
gi|323191535|gb|EFZ76796.1| flagellar basal-body rod protein FlgB [Escherichia coli RN587/1]
gi|323379902|gb|ADX52170.1| flagellar basal-body rod protein FlgB [Escherichia coli KO11]
gi|323975933|gb|EGB71027.1| flagellar basal-body rod protein FlgB [Escherichia coli TW10509]
gi|327254551|gb|EGE66167.1| flagellar basal-body rod protein FlgB [Escherichia coli STEC_7v]
Length = 111
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 9 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 52
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 53 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 106
Query: 127 VVRG 130
+ G
Sbjct: 107 AIEG 110
>gi|291085838|ref|ZP_06354199.2| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
29220]
gi|291070005|gb|EFE08114.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
29220]
Length = 118
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 18/124 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ ER ++++ N+AN TPN++AKDI + M R T++
Sbjct: 12 LGVHPLAVKLRLERTELLTANLANVDTPNFKAKDI-------DFATEMQRASRTNVLPE- 63
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
++ GNTV + E + Y+ + + S +
Sbjct: 64 ----------VDVKYRVPMQPSEDGNTVELNTEQARFSQNSMDYQSSLTFLNLQLSGIKE 113
Query: 127 VVRG 130
+ G
Sbjct: 114 AIEG 117
>gi|324325761|gb|ADY21021.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 135
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNTADLKTNADLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans
OCh 114]
gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
149]
gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans
OCh 114]
gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
149]
Length = 129
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHETHLKES 65
+ + + R + +SENI+NA TP YR + + SFET Q T L +S
Sbjct: 8 LDVTTSGLKAQATRLRHLSENISNADTPGYR-RKLVSFETAFGGQGVSTVETSRVRLDQS 66
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM-- 123
++ +H P+ +G G+ V + EL + + YE N K+ ++ M
Sbjct: 67 TLERVYDPSH----PMADESGY-FDGSNVDLLIELSDAREAQRSYEANLKVFEQTRKMSS 121
Query: 124 -VMHVVR 129
+M ++R
Sbjct: 122 SLMELLR 128
>gi|302338074|ref|YP_003803280.1| flagellar basal-body rod protein FlgB [Spirochaeta smaragdinae DSM
11293]
gi|301635259|gb|ADK80686.1| flagellar basal-body rod protein FlgB [Spirochaeta smaragdinae DSM
11293]
Length = 138
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--------LMARTH 58
+ + + R+++++ NIANA TPNY+ + + +FE+ L + A T+
Sbjct: 11 LDVLHRSMDVEMLRRQVMANNIANADTPNYK-RSVVNFESQLARALDSEKVTKPQAALTN 69
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
E H+ + ++ + LD + +GN V + E + Y++ ++++
Sbjct: 70 ERHIPFNRV--QNYRDVRPKRVLDYLSESDNNGNNVDVEEESMLLLQNQLRYDMMSRVVA 127
Query: 119 KLNSMVMHVVR 129
S V V+R
Sbjct: 128 GEFSRVNIVLR 138
>gi|217959227|ref|YP_002337775.1| flagellar basal body rod protein FlgB [Bacillus cereus AH187]
gi|229138443|ref|ZP_04267032.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
gi|217063551|gb|ACJ77801.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH187]
gi|228644980|gb|EEL01223.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
Length = 135
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNTADLKTNADLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|256833244|ref|YP_003161971.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM
20603]
gi|256686775|gb|ACV09668.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM
20603]
Length = 113
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ + L++RQ++++ N+AN +TPN+ A+ + FE L++
Sbjct: 10 LNSALDGLAQRQRVIANNVANINTPNFHAQRVQ-FEDELSRQVQRG-------------- 54
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N V ++ GN V + E + Y+L T+ I S + +R
Sbjct: 55 ---NGAVTPTVQRSLEPTRLDGNNVNLDTETLLNIDTVLRYQLATQAIDGTYSSLRAAMR 111
>gi|293408364|ref|ZP_06652203.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
gi|301646810|ref|ZP_07246662.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
gi|331640710|ref|ZP_08341857.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|331645415|ref|ZP_08346519.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
gi|331671801|ref|ZP_08372597.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
gi|291471542|gb|EFF14025.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
gi|301075003|gb|EFK89809.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
gi|331040084|gb|EGI12292.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
gi|331045577|gb|EGI17703.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
gi|331070790|gb|EGI42149.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
Length = 121
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 19 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 63 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 116
Query: 127 VVRG 130
+ G
Sbjct: 117 AIEG 120
>gi|168180910|ref|ZP_02615574.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
2916]
gi|170758458|ref|YP_001787985.1| flagellar basal body rod protein FlgB [Clostridium botulinum A3
str. Loch Maree]
gi|169405447|gb|ACA53858.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A3
str. Loch Maree]
gi|182668259|gb|EDT80238.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
2916]
gi|322806997|emb|CBZ04567.1| flagellar basal-body rod protein FlgB [Clostridium botulinum H04402
065]
Length = 133
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKES 65
+ + + S R K++S NIAN +TP+Y+ ++ ET+ + N M T E H+ +
Sbjct: 14 DLLKKSMDASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMNDG 73
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
G ++ +D +T ++ GN V I NE+ + +Y
Sbjct: 74 VEFGQ------VKEEVDNSTSMRTDGNNVDIDNEMVNNSANALMYNA 114
>gi|253681456|ref|ZP_04862253.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str.
1873]
gi|253561168|gb|EES90620.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str.
1873]
Length = 134
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
+ + Q ++R+ +++ NIAN +T Y+ + +FE L ++ + T++ H+
Sbjct: 13 YDLIKQSLKATAKRKNVINNNIANFNTKGYK-RSYVTFEDSLKESKDKLDLKITNDKHIA 71
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
G I D++ +++ GN V + NE+ Y + S+
Sbjct: 72 YKKKFGE------INVKKDESDSMKMDGNNVDVDNEMTNLAANTLEYNALITTLNSTLSL 125
Query: 124 VMHVVRG 130
+++ G
Sbjct: 126 KRYIING 132
>gi|229195956|ref|ZP_04322709.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
gi|228587515|gb|EEK45580.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
Length = 135
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKSNTADLKTNADLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNAKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|148380623|ref|YP_001255164.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str.
ATCC 3502]
gi|153932093|ref|YP_001384909.1| flagellar basal body rod protein FlgB [Clostridium botulinum A str.
ATCC 19397]
gi|153937135|ref|YP_001388378.1| flagellar basal body rod protein FlgB [Clostridium botulinum A str.
Hall]
gi|153941113|ref|YP_001391965.1| flagellar basal body rod protein FlgB [Clostridium botulinum F str.
Langeland]
gi|168183266|ref|ZP_02617930.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
gi|170757776|ref|YP_001782282.1| flagellar basal body rod protein FlgB [Clostridium botulinum B1
str. Okra]
gi|226950078|ref|YP_002805169.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
str. Kyoto]
gi|237796105|ref|YP_002863657.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
str. 657]
gi|148290107|emb|CAL84226.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
3502]
gi|152928137|gb|ABS33637.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str.
ATCC 19397]
gi|152933049|gb|ABS38548.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str.
Hall]
gi|152937009|gb|ABS42507.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F str.
Langeland]
gi|169122988|gb|ACA46824.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B1
str. Okra]
gi|182673652|gb|EDT85613.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
gi|226842504|gb|ACO85170.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
str. Kyoto]
gi|229262300|gb|ACQ53333.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
str. 657]
gi|295319982|gb|ADG00360.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F str.
230613]
Length = 133
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKES 65
+ + N S R K++S NIAN +TP+Y+ ++ ET+ + N M T E H+ +
Sbjct: 14 DLLKKSMNASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMNDG 73
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
G ++ +D +T ++ GN V I NE+ + +Y
Sbjct: 74 VEFGQ------VKEEVDNSTSMRTDGNNVDIDNEMVNNSANALMYNA 114
>gi|229029423|ref|ZP_04185506.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
gi|228731882|gb|EEL82781.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
Length = 135
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ ++ +++ L +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSVLYKSNAADLNSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGVSINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|229155314|ref|ZP_04283425.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
gi|228628239|gb|EEK84955.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
Length = 135
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKGNPDLYQTNE 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ LY ++ I + +
Sbjct: 71 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
17029]
gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
WS8N]
gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter
sphaeroides ATCC 17029]
gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
WS8N]
Length = 126
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +++ + R + VSENIANA TP Y K + SF+ + + + T L
Sbjct: 5 LQSLGLSASGMRSQALRLRHVSENIANADTPGYHRKTV-SFQE--DPDSGLVSTGPVRLD 61
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S+ ++ H PL G G+ V + E+ + + YE N ++ + M
Sbjct: 62 RSELQKIYAPGH----PLAGEDGY-YDGSNVDLVVEVADAREAQRSYEANLRMFDQARQM 116
Query: 124 VMHVV 128
++
Sbjct: 117 TQSLL 121
>gi|149908762|ref|ZP_01897423.1| LfgB [Moritella sp. PE36]
gi|149808304|gb|EDM68243.1| LfgB [Moritella sp. PE36]
Length = 123
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I +R +I++ N+AN TP Y A+D F+++L ++ +
Sbjct: 9 LGIHPYALQARVQRSEILAGNLANVDTPGYLARD-YDFKSVLTN---------LEMQLNQ 58
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
S+G +++ GNT + E K + ++ + + +
Sbjct: 59 STGGRLPELEMDSLYRVPFQASKDGNTAELGVEQAKFNNNAMNFQSSLTFLNMRIQGLQK 118
Query: 127 VVRG 130
V+ G
Sbjct: 119 VIDG 122
>gi|254473399|ref|ZP_05086796.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
gi|211957515|gb|EEA92718.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
Length = 74
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
MA T H+ E ++ + + V VS N+V + EL KSG + +
Sbjct: 1 MQMAATQAGHISEDGANSRR-----VRVSDGEAWQVTVSDNSVSLEQELIKSGEVARQHS 55
Query: 112 LNTKLIKKLNSMVMHVV 128
LNT+L+ ++ +
Sbjct: 56 LNTQLVGSFYGLMKSSL 72
>gi|224534383|ref|ZP_03674961.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S]
gi|224514485|gb|EEF84801.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S]
Length = 135
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL--------MARTHE 59
+ ++ + LS RQ +VS+NIAN TPN++ I SFE L + L + ++ +
Sbjct: 9 DFSHRYLDVLSLRQSVVSDNIANVDTPNFKRSKI-SFEAELEKALLNKDKNNLNLIKSSD 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
HL S + + LD + + +GN V I +E+ + +Y L T +
Sbjct: 68 KHLSR-LKSPEYSDVKPHRV-LDHFSTMNNNGNNVDIDSEIKVLVQNQMMYHLMTNVQAH 125
Query: 120 LNSMVMHVVR 129
+ V++
Sbjct: 126 YFKSINIVLK 135
>gi|229166584|ref|ZP_04294336.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
gi|228616838|gb|EEK73911.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
Length = 161
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMAR 56
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +
Sbjct: 34 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNMSSALYKKNAADLKSNPDLYQ 93
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+ HL +++ + + GN+V +T E+ LY ++
Sbjct: 94 TNVMHLPTANTKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKTNQLYGVSINA 147
Query: 117 IKKLNSMVMHVVRG 130
I + + RG
Sbjct: 148 INTQYA-INQAARG 160
>gi|15639387|ref|NP_218836.1| flagellar basal-body rod protein (flgB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025629|ref|YP_001933401.1| flagellar basal-body rod protein [Treponema pallidum subsp.
pallidum SS14]
gi|3322679|gb|AAC65384.1| flagellar basal-body rod protein (flgB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018204|gb|ACD70822.1| flagellar basal-body rod protein [Treponema pallidum subsp.
pallidum SS14]
gi|291059786|gb|ADD72521.1| flagellar basal-body rod protein FlgB [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 136
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + + + R ++ + N+ANA P ++ D+ +FE L + R + K++ +
Sbjct: 9 DLLHRALDVNALRYEVTANNLANAEVPGFKRTDV-NFEAELKRALDSQRNETSFFKQATA 67
Query: 68 SGLHWNAHVI-------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
++ VI LD T V+ +GN V E I+ Y++ ++++
Sbjct: 68 GTNMLSSDVIDYRSVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQMLSQMVGFQ 127
Query: 121 NSMVMHVVR 129
V V+R
Sbjct: 128 YRQVESVLR 136
>gi|304321144|ref|YP_003854787.1| hypothetical protein PB2503_07949 [Parvularcula bermudensis
HTCC2503]
gi|303300046|gb|ADM09645.1| hypothetical protein PB2503_07949 [Parvularcula bermudensis
HTCC2503]
Length = 110
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 23/122 (18%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
++A A + RQ +VS+N+A+ +TP YR + SF ++
Sbjct: 8 ILEMAKAMAQHAASRQSVVSQNLAHLNTPGYRQMAMPSFADVVK---------------- 51
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
EA +D +GN+V + +L + + +E+ L ++ ++
Sbjct: 52 -------GRERAEARVDSRAVPNPNGNSVSLETQLEEMASTRGEHEMALGLWEQTLALYK 104
Query: 126 HV 127
Sbjct: 105 TA 106
>gi|229121295|ref|ZP_04250526.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
gi|228662140|gb|EEL17749.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
Length = 135
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQINKSSALYKNNAADLKGNPDLYQTNE 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ LY ++ I + +
Sbjct: 71 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|256020225|ref|ZP_05434090.1| Lateral flagellar rod protein (FlgB-like) [Shigella sp. D9]
Length = 114
Score = 63.4 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 12 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 56 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 109
Query: 127 VVRG 130
+ G
Sbjct: 110 AIEG 113
>gi|229058377|ref|ZP_04196761.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
gi|228719886|gb|EEL71476.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
Length = 161
Score = 63.4 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMAR 56
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +
Sbjct: 34 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKMNMSSALYKKNAADLKSNPDLYQ 93
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+ HL +++ + + GN+V +T E+ LY ++
Sbjct: 94 TNVMHLPTANTKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKTNQLYGVSINA 147
Query: 117 IKKLNSMVMHVVRG 130
I + + RG
Sbjct: 148 INTQYA-INQAARG 160
>gi|300936122|ref|ZP_07151061.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
gi|300458700|gb|EFK22193.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
Length = 121
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 19 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + S +
Sbjct: 63 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSCLTFLNLQISGIRE 116
Query: 127 VVRG 130
+ G
Sbjct: 117 AIEG 120
>gi|300817273|ref|ZP_07097491.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
gi|331666543|ref|ZP_08367417.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
gi|332281387|ref|ZP_08393800.1| lateral flagellar rod protein [Shigella sp. D9]
gi|300530249|gb|EFK51311.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
gi|331065767|gb|EGI37651.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
gi|332103739|gb|EGJ07085.1| lateral flagellar rod protein [Shigella sp. D9]
Length = 121
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 19 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 63 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 116
Query: 127 VVRG 130
+ G
Sbjct: 117 AIEG 120
>gi|229132556|ref|ZP_04261405.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
gi|228650902|gb|EEL06888.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
Length = 161
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMAR 56
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +
Sbjct: 34 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNMSSALYKKNTADLKSNPDLYQ 93
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+ HL +++ + + GN+V +T E+ LY ++
Sbjct: 94 TNVMHLPTANTKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKTNQLYGVSINA 147
Query: 117 IKKLNSMVMHVVRG 130
I + + RG
Sbjct: 148 INTQYA-INQAARG 160
>gi|228933027|ref|ZP_04095890.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229090704|ref|ZP_04221937.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
gi|228692646|gb|EEL46372.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
gi|228826628|gb|EEM72399.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 138
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 11 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 69
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 70 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 129
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 130 A-INQAARG 137
>gi|302342344|ref|YP_003806873.1| flagellar basal-body rod protein FlgB [Desulfarculus baarsii DSM
2075]
gi|301638957|gb|ADK84279.1| flagellar basal-body rod protein FlgB [Desulfarculus baarsii DSM
2075]
Length = 133
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 23/139 (16%)
Query: 1 MQPITFFQ----IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF---- 52
M + F + + + + ++ ++++ N++N TPNY + FE L
Sbjct: 1 MSIVDIFDRNVELLNANLDRRAQSHRLIARNVSNIDTPNYSGTGLE-FEKQLRAAIKGDV 59
Query: 53 ---LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
M RT HL + + V + V + E+ K +
Sbjct: 60 LPTSMQRTDPRHLPIDEGAAFADAQGVYKDTGP-----------VHLDIEMSKLAENNIM 108
Query: 110 YELNTKLIKKLNSMVMHVV 128
+ L+ K S++ +
Sbjct: 109 FNTMVTLLNKKFSLLKTAI 127
>gi|296124186|ref|YP_003631964.1| flagellar basal-body rod protein FlgB [Planctomyces limnophilus DSM
3776]
gi|296016526|gb|ADG69765.1| flagellar basal-body rod protein FlgB [Planctomyces limnophilus DSM
3776]
Length = 158
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 22/143 (15%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMARTHETHLKES 65
+ Q A + RQ +++ N+AN TP YR +D ++ F+ L + + L
Sbjct: 12 NLLKQTAKFAELRQDVLAGNVANIDTPGYRMRDLPVADFQNALKKAYESQTAQPASLHPP 71
Query: 66 DSSGLHWNAHVIEAPL--------------------DQTTGVQVSGNTVGITNELYKSGH 105
++ + +I Q N I ++ +
Sbjct: 72 LANPENPLTDLISPSATSVHTTNFFPESLFQASEKKTQPGITFQDANNRSIEQQMTQISK 131
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
L T+L+ + + V+
Sbjct: 132 NSMLQSFATELLNLQYNQLQSVI 154
>gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
Length = 130
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 8/121 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHL 62
++S + R +IVSENIAN TP Y K I FET M T L
Sbjct: 6 NALSVSSSGLRAQASRLRIVSENIANVDTPGYHRKTI-PFETSGNARDGVQMVETGRVDL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
SD ++ H PL G G V + EL + + YE N K+ ++
Sbjct: 65 DRSDLERIYDPQH----PLADEAGF-YDGTNVDLIVELADAREAQRSYEANLKMFEQTRQ 119
Query: 123 M 123
M
Sbjct: 120 M 120
>gi|59889778|emb|CAH19133.1| Lateral flagellar rod protein (FlgB-like) [Escherichia coli]
gi|284920042|emb|CBG33098.1| lateral flagellar rod protein (FlgB-like) [Escherichia coli 042]
Length = 111
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 9 LGVYPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 52
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 53 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 106
Query: 127 VVRG 130
+ G
Sbjct: 107 AIEG 110
>gi|30019788|ref|NP_831419.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 14579]
gi|49480943|ref|YP_035863.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52143715|ref|YP_083114.1| flagellar basal body rod protein FlgB [Bacillus cereus E33L]
gi|196033492|ref|ZP_03100904.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
gi|296502343|ref|YP_003664043.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
BMB171]
gi|29895333|gb|AAP08620.1| Flagellar basal-body rod protein flgB [Bacillus cereus ATCC 14579]
gi|49332499|gb|AAT63145.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51977184|gb|AAU18734.1| flagellar basal-body rod protein [Bacillus cereus E33L]
gi|195993926|gb|EDX57882.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
gi|296323395|gb|ADH06323.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
BMB171]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|228920454|ref|ZP_04083799.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229178152|ref|ZP_04305523.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
gi|228605282|gb|EEK62732.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
gi|228839084|gb|EEM84380.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 138
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 11 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 69
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 70 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISVNAINTQY 129
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 130 A-INQAARG 137
>gi|160939632|ref|ZP_02086980.1| hypothetical protein CLOBOL_04524 [Clostridium bolteae ATCC
BAA-613]
gi|158437423|gb|EDP15187.1| hypothetical protein CLOBOL_04524 [Clostridium bolteae ATCC
BAA-613]
Length = 118
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 17/122 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + +Q+I S NIAN TP Y+AK + F +L + +
Sbjct: 9 LGALERGMDGMWLKQQIASHNIANVETPGYKAKKVE-FRDVL-------------YETAQ 54
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ V E D T + GN V + E + Y T + S + +
Sbjct: 55 GTERISKPVVEE---DGNTQARPDGNNVQVEKEELELWKAYTQYSALTGRVSGKLSTLRY 111
Query: 127 VV 128
V+
Sbjct: 112 VI 113
>gi|30261742|ref|NP_844119.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Ames]
gi|47526962|ref|YP_018311.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
'Ames Ancestor']
gi|49184572|ref|YP_027824.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Sterne]
gi|65319011|ref|ZP_00391970.1| COG1815: Flagellar basal body protein [Bacillus anthracis str.
A2012]
gi|165869479|ref|ZP_02214138.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0488]
gi|167633168|ref|ZP_02391493.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0442]
gi|167639175|ref|ZP_02397448.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0193]
gi|170686191|ref|ZP_02877413.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0465]
gi|170706512|ref|ZP_02896972.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0389]
gi|177650628|ref|ZP_02933595.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0174]
gi|190566366|ref|ZP_03019284.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
Tsiankovskii-I]
gi|227815499|ref|YP_002815508.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
684]
gi|229601762|ref|YP_002866142.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0248]
gi|254683232|ref|ZP_05147093.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
CNEVA-9066]
gi|254723820|ref|ZP_05185606.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
A1055]
gi|254734584|ref|ZP_05192296.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Western North America USA6153]
gi|254740993|ref|ZP_05198681.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Kruger B]
gi|254755236|ref|ZP_05207270.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Vollum]
gi|254759772|ref|ZP_05211796.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
Australia 94]
gi|30255970|gb|AAP25605.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
Ames]
gi|47502110|gb|AAT30786.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
'Ames Ancestor']
gi|49178499|gb|AAT53875.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
Sterne]
gi|164714919|gb|EDR20437.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0488]
gi|167512965|gb|EDR88338.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0193]
gi|167531206|gb|EDR93884.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0442]
gi|170128610|gb|EDS97477.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0389]
gi|170669888|gb|EDT20629.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0465]
gi|172083772|gb|EDT68832.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0174]
gi|190562501|gb|EDV16468.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
Tsiankovskii-I]
gi|227006070|gb|ACP15813.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
684]
gi|229266170|gb|ACQ47807.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
A0248]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLYQTNE 70
Query: 74 AHVIEAPLDQTT--------GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
HV T GN+V +T E+ LY ++ I + +
Sbjct: 71 MHVPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|331269311|ref|YP_004395803.1| flagellar basal-body rod protein FlgB [Clostridium botulinum
BKT015925]
gi|329125861|gb|AEB75806.1| flagellar basal-body rod protein FlgB [Clostridium botulinum
BKT015925]
Length = 134
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLK 63
+ + Q N ++R+ +++ NI+N +T Y+ + +FE L ++ + T++ H+
Sbjct: 13 YDLIKQSLNATAKRKNVINNNISNFNTKGYK-RSYVTFEDSLKESKDKLNLKITNDKHID 71
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
G I D++ +++ GN V + NE+ Y + S+
Sbjct: 72 YKKKFGE------ISIKKDESDSMKMDGNNVDVDNEMTNLAANNLEYNALITTLNSTLSL 125
Query: 124 VMHVVRG 130
+++ G
Sbjct: 126 KRYIING 132
>gi|196039148|ref|ZP_03106455.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
gi|196030293|gb|EDX68893.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPGLYQTNE 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ LY ++ I + +
Sbjct: 71 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|228984827|ref|ZP_04144999.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775025|gb|EEM23419.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLYQTNE 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ LY ++ I + +
Sbjct: 71 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|108809058|ref|YP_652974.1| flagellar basal body rod protein FlgB [Yersinia pestis Antiqua]
gi|108810745|ref|YP_646512.1| flagellar basal body rod protein FlgB [Yersinia pestis Nepal516]
gi|145597814|ref|YP_001161890.1| flagellar basal body rod protein FlgB [Yersinia pestis Pestoides F]
gi|108774393|gb|ABG16912.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
gi|108780971|gb|ABG15029.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
gi|145209510|gb|ABP38917.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 17/134 (12%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------FLMARTHETHLKES 65
R +++S N+AN +TPN++AKDI F + + R+ L
Sbjct: 2 AMQLRLTRAELLSANLANVNTPNFQAKDI-DFAAEMQRAKRGNGVMAAPDRSSAQMLSTQ 60
Query: 66 DSSGLHWNAHVIEAP---------LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
SS + ++ +P + GNTV + E + Y+ +
Sbjct: 61 MSSAQMSSPQMMSSPQIMSSPQIKYRLPYQPSLDGNTVALNVEQAEFSKNALDYQTSLSF 120
Query: 117 IKKLNSMVMHVVRG 130
+ + + + G
Sbjct: 121 LNMKLTGLKQAIEG 134
>gi|326939357|gb|AEA15253.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVNAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|196045109|ref|ZP_03112342.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
gi|218902858|ref|YP_002450692.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
gi|228945346|ref|ZP_04107701.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|300117338|ref|ZP_07055128.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
gi|301053280|ref|YP_003791491.1| flagellar basal body rod protein [Bacillus anthracis CI]
gi|196024111|gb|EDX62785.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
gi|218535408|gb|ACK87806.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
gi|228814318|gb|EEM60584.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|298725173|gb|EFI65825.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
gi|300375449|gb|ADK04353.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
str. CI]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLYQTNE 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ LY ++ I + +
Sbjct: 71 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|224825774|ref|ZP_03698878.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
gi|224601998|gb|EEG08177.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
Length = 118
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
I + +ER K+++ NIAN +TP Y+A+D+ ++ L A E D
Sbjct: 9 LDIHPEALKLRAERTKVLASNIANETTPGYQARDVDF------RSALAAAADEADFPLDD 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
SSG GNTV + E + ++ + + +
Sbjct: 63 SSGGLL--------YRVPNHPSRDGNTVELGVEQAEFSQNVSEFQTSLTFLNMQYKGLAK 114
Query: 127 VVRG 130
V+ G
Sbjct: 115 VIAG 118
>gi|206970568|ref|ZP_03231520.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
gi|218232483|ref|YP_002366428.1| flagellar basal body rod protein FlgB [Bacillus cereus B4264]
gi|229069295|ref|ZP_04202585.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
gi|229078925|ref|ZP_04211477.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
gi|206734204|gb|EDZ51374.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
gi|218160440|gb|ACK60432.1| flagellar basal-body rod protein FlgB [Bacillus cereus B4264]
gi|228704339|gb|EEL56773.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
gi|228713782|gb|EEL65667.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISVNAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|228907376|ref|ZP_04071234.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
gi|228852237|gb|EEM97033.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
Length = 135
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMAR 56
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMKKSSALYKNNAADLKSNPDLYQ 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+E HL ++ + + GN+V +T E+ LY ++
Sbjct: 68 TNEMHLPTVNTKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKTNQLYGISINA 121
Query: 117 IKKLNSMVMHVVRG 130
I + + RG
Sbjct: 122 INTQYA-INQAARG 134
>gi|187778745|ref|ZP_02995218.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
15579]
gi|187772370|gb|EDU36172.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
15579]
Length = 133
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMARTHETHLKES 65
+ + + S R + +S NIAN +TP Y+ ++ ET+ + N M T E H+
Sbjct: 14 DLLKKSMDASSYRGRAISNNIANYNTPGYKRHYVTFEETLKDNLNNINMKVTTEKHMNNG 73
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
G ++ +D +T ++ GN V I NE+ + +Y
Sbjct: 74 AEFGQ------VKEEVDNSTSMRTDGNNVDIDNEMVNNSANALMYNA 114
>gi|75761145|ref|ZP_00741137.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228900325|ref|ZP_04064555.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222]
gi|74491373|gb|EAO54597.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228859360|gb|EEN03790.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222]
Length = 138
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 11 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 69
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 70 QTNEMHLPTVNMKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 129
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 130 A-INQAARG 137
>gi|291562018|emb|CBL40832.1| flagellar basal-body rod protein FlgB [butyrate-producing bacterium
SS3/4]
Length = 130
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ + + L RQ + NIAN TP ++++ ++ FE L Q A T + ++ +
Sbjct: 11 LGEKTLDSLWMRQNLTMNNIANVDTPGFKSQYMT-FENELAQKIRSALTVKKTSMKNVAR 69
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G+ + L+++T ++ N V + E + Y Y+ + S +
Sbjct: 70 GIENMRPSVHTTLNEST--RLDENNVDMDQEQVELARTAYEYQFMISSVSSDLSRLRSAA 127
Query: 129 R 129
+
Sbjct: 128 K 128
>gi|195952549|ref|YP_002120839.1| flagellar basal body rod protein FlgB [Hydrogenobaculum sp.
Y04AAS1]
gi|195932161|gb|ACG56861.1| flagellar basal body rod protein FlgB [Hydrogenobaculum sp.
Y04AAS1]
Length = 124
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETHLKESDSSGLH 71
++ + K++ N+ANA TP+Y+ ++ FE L + T+ + +G H
Sbjct: 14 LDYTWLKHKVILSNLANADTPHYKELNVRFVPFEKEL----ALKITNPKKQIQPVQTGPH 69
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
++ E+ L + N V I ++ ++ YE K+I + + ++G
Sbjct: 70 FDILEKESGL-----IGNDRNNVSIEKQMAQANANYIAYETYMKMITDNINELNTAIKG 123
>gi|293403352|ref|ZP_06647443.1| flgB [Escherichia coli FVEC1412]
gi|298378964|ref|ZP_06988845.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
gi|291429205|gb|EFF02225.1| flgB [Escherichia coli FVEC1412]
gi|298280077|gb|EFI21581.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
Length = 111
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 9 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 52
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 53 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 106
Query: 127 VVRG 130
+ G
Sbjct: 107 GIEG 110
>gi|229160707|ref|ZP_04288699.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
gi|228622722|gb|EEK79556.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
Length = 154
Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + +++ + L +
Sbjct: 27 VSHYMNYLVTKRNTVSSNIANANTPGYQAQDVT-FAEQMNKSSALYKSNSSDLNSNPDLY 85
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ + GN+V ++ E+ LY ++ I
Sbjct: 86 QTNEMHLPTVNMKNTYAKIQTKSMQMNKDGNSVDVSTEMLDLMKANQLYGISINAINTQY 145
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 146 A-INQAARG 153
>gi|229172390|ref|ZP_04299949.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
gi|228610861|gb|EEK68124.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
Length = 135
Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK + ++
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNVADLKSNPDLYQTNE 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+H + ++ GN+V +T E+ LY ++ I + +
Sbjct: 71 MHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|228926779|ref|ZP_04089847.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832892|gb|EEM78461.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 138
Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 11 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 69
Query: 67 -SSGLHWNAHVIEAPLD----QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 70 QTNEMHLPTVNTKNKYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 129
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 130 A-INQAARG 137
>gi|218896676|ref|YP_002445087.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
gi|218543629|gb|ACK96023.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
Length = 135
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F +N++ + + + LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNMKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|298345987|ref|YP_003718674.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
gi|304390255|ref|ZP_07372209.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315654574|ref|ZP_07907480.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333]
gi|315657520|ref|ZP_07910402.1| flagella basal body rod protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236048|gb|ADI67180.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
gi|304326737|gb|EFL93981.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315491038|gb|EFU80657.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333]
gi|315491992|gb|EFU81601.1| flagella basal body rod protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 115
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ LS RQ+++++NIAN TP + A + SFE L + TH+ + S
Sbjct: 10 MRTALDGLSMRQRVIADNIANIQTPGFLAGKV-SFENELARAVQFGHPATTHIATARS-- 66
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ GN V + E S ++L T+ I + + +R
Sbjct: 67 --------------LEPTRIDGNNVNLDTETISSVDTVLRFQLATQAISGEYTNIRSAMR 112
>gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis
HTCC2601]
gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601]
Length = 130
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++S ++R ++VSENIAN TP YR K + + + +T L SD
Sbjct: 8 LSVSSSGLRAQADRLRVVSENIANVDTPGYRRKTLPFELGEGSDGVREVQAGDTRLDRSD 67
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM--- 123
W+ H PL G G V + EL + + YE N K+ ++ M
Sbjct: 68 LE-RIWDPHH---PLADPAGF-YDGTNVDLIVELADAREAQRSYEANLKMFEQTRQMSSS 122
Query: 124 VMHVVR 129
+M ++R
Sbjct: 123 LMDLLR 128
>gi|163939549|ref|YP_001644433.1| flagellar basal body rod protein FlgB [Bacillus weihenstephanensis
KBAB4]
gi|163861746|gb|ABY42805.1| flagellar basal-body rod protein [Bacillus weihenstephanensis
KBAB4]
Length = 135
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMAR 56
S + N+L ++ VS NIANA+TP Y+A+D++ E + L N + +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKMNMSSGLYKKNAADLKSNPDLYQ 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+ HL +++ + + GN+V +T E+ LY ++
Sbjct: 68 TNVMHLPTANTKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKTNQLYGVSINA 121
Query: 117 IKKLNSMVMHVVRG 130
I + + RG
Sbjct: 122 INTQYA-INQAARG 134
>gi|299822286|ref|ZP_07054172.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
gi|299815815|gb|EFI83053.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
Length = 121
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ ++L ++S+NIANA T Y+AK+ SSFE L Q + T+ H+ +
Sbjct: 8 LGSYISYLQSSNTLISDNIANAQTAGYKAKE-SSFEQNLQQAGSLRETNPKHMAGESAGS 66
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ ++ V GN V +T+E+ +Y +
Sbjct: 67 ANVRI------TEKAGSVNEDGNNVNVTDEMIGLTKNNQMYAIAIN 106
>gi|118477179|ref|YP_894330.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis str.
Al Hakam]
gi|118416404|gb|ABK84823.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
Hakam]
Length = 138
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMARTHET 60
N+L ++ VS NIANA+TP Y+A+D++ E + L N + +T+E
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNISSALYKNNAADLKSNPDLYQTNEM 74
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL ++ + + GN+V +T E+ LY ++ I
Sbjct: 75 HLPTVNTKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQ 128
Query: 121 NSMVMHVVRG 130
+ + RG
Sbjct: 129 YA-INQAARG 137
>gi|306820110|ref|ZP_07453758.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551888|gb|EFM39831.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 133
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHE 59
+ + S R + +S N+AN +TPNY+ K + FE L QN A T+
Sbjct: 6 DYLGTMKTALDAYSMRNESISSNLANVNTPNYKRKYVR-FEEYLTASYDKQNLKGATTNI 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H++ S+ D + + GN V + E S Y + I
Sbjct: 65 RHIEIPSSTSKAPFLAT-----DNSVSTREDGNNVNLDTEEVDSVKNYINYSMVADQISN 119
Query: 120 LNSMVMHVVRG 130
V+ + G
Sbjct: 120 YFKSVITGITG 130
>gi|229189840|ref|ZP_04316851.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
gi|228593648|gb|EEK51456.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
Length = 147
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIAN +TP Y+A+D++ F +N++ + + + LK +
Sbjct: 20 VSHYMNYLVTKRNTVSSNIANGNTPGYKAQDVT-FAEQMNKSSALYKNNAADLKSNPDLY 78
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 79 QTNKMHLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQY 138
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 139 A-INQAARG 146
>gi|255321465|ref|ZP_05362623.1| flagellar basal-body rod protein FlgB [Campylobacter showae RM3277]
gi|255301321|gb|EET80580.1| flagellar basal-body rod protein FlgB [Campylobacter showae RM3277]
Length = 145
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 17/132 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MAR 56
+ + RQ+++S NIAN TP Y+A+DI+ FE L+Q +A+
Sbjct: 13 LVESALASRNLRQQMISSNIANIDTPFYKARDIA-FEAALSQTAQEIYGKDENKILKLAQ 71
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T + H D + L + NTV + E + + +
Sbjct: 72 TDDAHFPRVDFPASNGATIF----LRDGHMARNDANTVDLDVETTELSKNAIMITALDRA 127
Query: 117 IKKLNSMVMHVV 128
+++ + V+
Sbjct: 128 MRQSGQIFKSVI 139
>gi|229096229|ref|ZP_04227202.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
gi|228687189|gb|EEL41094.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
Length = 138
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F ++++ + + + LK +
Sbjct: 11 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMSKSSALYKNNAADLKSNPDLY 69
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 70 QTNEMHLPTVNMKNTYAKIQTKSMQKNQDGNSVDVTTEMLDLMKANQLYGISINAINTQY 129
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 130 A-INQAARG 137
>gi|218703522|ref|YP_002411041.1| lateral flagellar rod FlgB-like protein [Escherichia coli UMN026]
gi|300900364|ref|ZP_07118539.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
gi|218430619|emb|CAR11485.1| Lateral flagellar rod protein (FlgB-like) [Escherichia coli UMN026]
gi|300356120|gb|EFJ71990.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
Length = 121
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ Q ER ++++ N+AN TPN++AKDI F + +
Sbjct: 19 LGVHPQAVKLRLERTELLTANLANVDTPNFKAKDI-DFAREMQRA--------------- 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
N ++ GNTV + +E + Y+ + + S +
Sbjct: 63 ------NNAAVDVQYRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIRE 116
Query: 127 VVRG 130
+ G
Sbjct: 117 GIEG 120
>gi|328947991|ref|YP_004365328.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens DSM
2489]
gi|328448315|gb|AEB14031.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens DSM
2489]
Length = 139
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + + S R ++ + NIAN+ N++ + + +FE+ L + F+ + + + +
Sbjct: 9 DLLHRALDVESLRYQVTANNIANSEVANFKRQSV-NFESELKKAFVSRDNEHSSFRMATN 67
Query: 68 SGLHWNAHVIEA--------PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + V D TT + +GN V E I+ Y L T+L+
Sbjct: 68 DARHIQSEVPRDWRDVEPRRVSDYTTSSKANGNNVDAEQEAMNVVQIQMQYRLLTQLMNF 127
Query: 120 LNSMVMHVVR 129
S V ++
Sbjct: 128 EFSQVKTAMK 137
>gi|152975155|ref|YP_001374672.1| flagellar basal body rod protein FlgB [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023907|gb|ABS21677.1| flagellar basal-body rod protein FlgB [Bacillus cytotoxicus NVH
391-98]
Length = 135
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----SSG 69
N+L ++ +S NI+NA+TP Y+A+D++ F + + + + + + LK + ++
Sbjct: 12 MNYLVTKRNTISNNISNANTPGYKAQDVT-FSEQMQMSNELYKKNASDLKTNSSLYQTNK 70
Query: 70 LHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
LH + +++ V GN+V +T E+ LY ++ I + +
Sbjct: 71 LHLPTANVKNTYAKIQEKSMQVNKDGNSVDVTTEMLDLLKTNQLYGISINAINTQYT-IN 129
Query: 126 HVVRG 130
RG
Sbjct: 130 QAARG 134
>gi|269796401|ref|YP_003315856.1| flagellar basal-body rod protein FlgB [Sanguibacter keddieii DSM
10542]
gi|269098586|gb|ACZ23022.1| flagellar basal-body rod protein FlgB [Sanguibacter keddieii DSM
10542]
Length = 113
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 18/123 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + L+ RQ++++ N+AN +TPNY A + SFE+ L
Sbjct: 7 FVALNSALDGLALRQRVIANNVANINTPNYLAGRV-SFESELASAVRRGT---------- 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
V ++ GN V + E + Y+L T+ + S +
Sbjct: 56 -------GAVTATQARSLEPTRLDGNNVNLDAETLLNVDTNLRYQLATQAVDGTFSSLRT 108
Query: 127 VVR 129
+R
Sbjct: 109 AMR 111
>gi|229102342|ref|ZP_04233050.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
gi|229115184|ref|ZP_04244594.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
gi|228668324|gb|EEL23756.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
gi|228680989|gb|EEL35158.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
Length = 135
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD--- 66
S + N+L ++ VS NIANA+TP Y+A+D++ F ++++ + + + LK +
Sbjct: 8 VSHYMNYLVTKRNTVSSNIANANTPGYKAQDVT-FAEQMSKSSALYKNNAADLKSNPDLY 66
Query: 67 -SSGLHWNA----HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ +H + ++ GN+V +T E+ LY ++ I
Sbjct: 67 QTNEMHLPTVNMKNTYAKIQTKSMQKNQDGNSVDVTTEMLDLMKANQLYGISINAINTQY 126
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 127 A-INQAARG 134
>gi|266621921|ref|ZP_06114856.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM
13479]
gi|288866394|gb|EFC98692.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM
13479]
Length = 118
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 17/122 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F+ + + +Q++ NIAN TP ++AK + F+ +L + +D
Sbjct: 9 FRALQSGLDAMWLKQQVAGHNIANVETPGFKAKKVE-FKQVLKE-------------AAD 54
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
SG + A V D T + GN V + E Y T + S + +
Sbjct: 55 GSGPVYKAVV---GTDNDTEARPDGNNVQVEKEELDLWKAYTEYSAMTSRMSGKLSTLRY 111
Query: 127 VV 128
V+
Sbjct: 112 VI 113
>gi|269976263|ref|ZP_06183259.1| flagellar basal-body rod protein FlgB [Mobiluncus mulieris 28-1]
gi|307699942|ref|ZP_07636993.1| putative flagellar basal-body rod protein FlgB [Mobiluncus mulieris
FB024-16]
gi|269935592|gb|EEZ92130.1| flagellar basal-body rod protein FlgB [Mobiluncus mulieris 28-1]
gi|307614980|gb|EFN94198.1| putative flagellar basal-body rod protein FlgB [Mobiluncus mulieris
FB024-16]
Length = 115
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 17/120 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ LS RQ+++++NIAN TP + A + FE L + H+ + S
Sbjct: 10 MRTALDGLSMRQRVIADNIANIQTPGFLAGKVR-FEDELARATRFGNPQSAHIATARS-- 66
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ GN V + E S ++L T+ + + + +R
Sbjct: 67 --------------LEPTRIDGNNVNLDTETISSVDTVLRFQLATQAMSAHYNGIRTAMR 112
>gi|225863602|ref|YP_002748980.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
gi|229183935|ref|ZP_04311151.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
gi|225786134|gb|ACO26351.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
gi|228599587|gb|EEK57191.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
Length = 135
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 20/134 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------------LNQNFLMAR 56
++ N+L ++ VS NIANA+TP Y+A+D++ E I L N + +
Sbjct: 8 VGRYMNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQINISSALYKNNAADLKSNPDLYQ 67
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T+E HL + + + GN+V +T E+ LY ++
Sbjct: 68 TNEMHLPTVNMKNTYAKIQTK------SMQTNKDGNSVDVTTEMLDLMKANQLYGISINA 121
Query: 117 IKKLNSMVMHVVRG 130
I + + RG
Sbjct: 122 INTQYA-INQAARG 134
>gi|2105145|gb|AAB57896.1| FlgB [Treponema denticola]
Length = 139
Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----------L 53
+ I + + S R + S N+AN+ PN++ ++ +FE+ L + F
Sbjct: 7 LRTTDILHRALDVNSLRYTVTSNNLANSDVPNFKRTEV-NFESELKRAFDSEKNAKGAFQ 65
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+A TH H+K ++ + + + LD T + +GN V +E K I+ Y+L
Sbjct: 66 LATTHPLHIKSNE--PIDYKTVSLCVVLDYLTAEKANGNNVNPEDEAMKVLKIQMQYQLL 123
Query: 114 TKLIKKLNSMVMHVVR 129
+ + + V V++
Sbjct: 124 SMMAGFQYNQVQSVLK 139
>gi|56130756|ref|YP_145659.1| putative flagellar basal-body rod protein [Ralstonia metallidurans
CH34]
gi|94152544|ref|YP_581951.1| flagellar basal body protein FlgB [Cupriavidus metallidurans CH34]
gi|56068746|emb|CAI11308.1| putative flagellar basal-body ROD protein [Cupriavidus
metallidurans CH34]
gi|93358914|gb|ABF13001.1| Flagellar basal body protein FlgB [Cupriavidus metallidurans CH34]
Length = 140
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFL-------MARTHETHLKESDSSGLHWNA 74
+ ++ NIANA TPNY+A+DI F L + MA T HL+ S+
Sbjct: 29 EFLAANIANADTPNYKARDI-DFGAELERAMASGNAFVGMATTSRRHLESRPSAAEEALL 87
Query: 75 HVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ + + GNTV + E + +
Sbjct: 88 YRV------PMQSGIDGNTVEMDVERVAFAENAVRMRFSIQ 122
>gi|227876736|ref|ZP_03994845.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
gi|306817683|ref|ZP_07451425.1| flagella basal body rod protein [Mobiluncus mulieris ATCC 35239]
gi|227842633|gb|EEJ52833.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
gi|304649497|gb|EFM46780.1| flagella basal body rod protein [Mobiluncus mulieris ATCC 35239]
Length = 106
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 17/120 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ LS RQ+++++NIAN TP + A + FE L + H+ + S
Sbjct: 1 MRTALDGLSMRQRVIADNIANIQTPGFLAGKVR-FEDELARATRFGNPQSAHIATARS-- 57
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ GN V + E S ++L T+ + + + +R
Sbjct: 58 --------------LEPTRIDGNNVNLDTETISSVDTVLRFQLATQAMSAHYNGIRTAMR 103
>gi|300854205|ref|YP_003779189.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
13528]
gi|300434320|gb|ADK14087.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
13528]
Length = 133
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN--QNFLMARTHETHLKESD 66
+ ++ + R + +S NI+N +T Y+ K ++ E + N N + H+K +
Sbjct: 15 LLARGLDAAEARSQAISSNISNINTAGYKRKYVTFEENLKNSVDNLELKTDDAKHIKMGN 74
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
G I D +T ++ GN V I E + +Y L SM
Sbjct: 75 DYG------AITTNTDSSTSMRSDGNNVDIEVETVNQAANELMYNALITLENNRLSMQKS 128
Query: 127 VVRG 130
V+ G
Sbjct: 129 VING 132
>gi|117928046|ref|YP_872597.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B]
gi|117648509|gb|ABK52611.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B]
Length = 125
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
LS RQ+ +++N+AN TPN+ AK + FE L K + +SG A +
Sbjct: 28 LSARQRALADNVANIDTPNFLAKRVV-FEDSL--------------KAAIASGDPGAAQI 72
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ T +GN V + E + Y+ + + + ++ +
Sbjct: 73 TTLTSLEPT--NTNGNNVNLDEETVSAIDTGLKYQTDIEALTAKYQLLKTAI 122
>gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
Length = 126
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +A+ + R + VSENIANA TP Y K + SF+ ++ L
Sbjct: 5 LQSLTMAASGMEAQAMRLRHVSENIANADTPGYHRKTM-SFQEAMDGG--TVEAGPVRLD 61
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S+ ++ H PL TG G+ V + E+ + + YE N K+ + M
Sbjct: 62 RSELVKIYDPGH----PLADETG-HYDGSNVDLVIEIADAREAQRSYEANLKMFDQARQM 116
Query: 124 VMH 126
Sbjct: 117 TQS 119
>gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter
lacuscaerulensis ITI-1157]
Length = 128
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++ + + R + VSENI+NA TP YR K + FE + + + L +S
Sbjct: 8 LEVTASALRAQAARLRHVSENISNADTPGYRRKTV-PFEAVHKDGADLVQAGRVRLDQSK 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM--- 123
S ++ H PL +G G+ V + E+ + + YE N K+ + M
Sbjct: 67 LSRIYDPGH----PLADESGHYQ-GSNVDLMIEIADAREAQRSYEANLKMFDQARQMSSS 121
Query: 124 VMHVVR 129
+M ++R
Sbjct: 122 LMELLR 127
>gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1]
gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1]
Length = 130
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHL 62
+A+ ++R VSENIANA TP Y+ + I+SFE + RT L
Sbjct: 6 NALSVAASGMRAQTQRLTHVSENIANADTPGYQ-RKITSFEVERGFSAVEGQVRTGPVRL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
++ + +H P+ G G+ V + EL + YE N ++ ++
Sbjct: 65 DQTALPVIFDPSH----PMADEAG-SYEGSNVDLVIELADAREANRSYEANLRIFDQIRQ 119
Query: 123 M 123
M
Sbjct: 120 M 120
>gi|223040425|ref|ZP_03610699.1| flagellar basal-body rod protein FlgB [Campylobacter rectus RM3267]
gi|222878275|gb|EEF13382.1| flagellar basal-body rod protein FlgB [Campylobacter rectus RM3267]
Length = 145
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 17/132 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MAR 56
+ + RQ+++S NIAN TP Y+A+DI+ FE L+Q +A+
Sbjct: 13 LVESALASRNLRQQMISSNIANIDTPFYKARDIA-FEAALSQTAQEIYGRDENKILKLAQ 71
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T + H D + L + NTV + E + + +
Sbjct: 72 TDDAHFPRVDFPASNAATIF----LRDGHMARNDANTVDLDVETTELSKNAIMVTALDRA 127
Query: 117 IKKLNSMVMHVV 128
+++ + V+
Sbjct: 128 MRQSGQIFKSVI 139
>gi|42526721|ref|NP_971819.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC
35405]
gi|41817036|gb|AAS11730.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC
35405]
gi|325473783|gb|EGC76971.1| FlgB protein [Treponema denticola F0402]
Length = 139
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----------L 53
+ I + + S R + S N+AN+ PN++ ++ +FE+ L + F
Sbjct: 7 LRTTDILHRALDVNSLRYTVTSNNLANSDVPNFKRTEV-NFESELKRAFDSEKNAKGAFQ 65
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+A TH H+K S + +E LD T + +GN V +E K I+ Y+
Sbjct: 66 LATTHPLHIK----SNEPIDYKTVEPVRVLDYLTAEKANGNNVNPEDEAMKVLKIQMQYQ 121
Query: 112 LNTKLIKKLNSMVMHVVR 129
L + + + V V++
Sbjct: 122 LLSMMAGFQYNQVQSVLK 139
>gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
Length = 130
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+++ ++R + VSENIANA TP YR K + SFE + +
Sbjct: 6 NALSVSASGLKAQAQRLQHVSENIANADTPGYRRKTV-SFEATHAGTGTAGAVTVSRVHL 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL---IKKLN 121
S+ PL TG G+TV + E+ + + YE N K+ +++++
Sbjct: 65 DQSAPQRIYDPSH--PLADETGHYQ-GSTVDLMIEIADAREAQRSYEANLKMFDQVRQMS 121
Query: 122 SMVMHVVR 129
+ +M ++R
Sbjct: 122 AGLMDLLR 129
>gi|126697816|ref|YP_001086713.1| flagellar basal-body rod protein [Clostridium difficile 630]
gi|115249253|emb|CAJ67066.1| Flagellar basal-body rod protein FlgB [Clostridium difficile]
Length = 105
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 23/127 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + I + + R + ++ NIAN +T Y+ I+ FE LN
Sbjct: 1 MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYIT-FEETLNDAM----------- 48
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
IE D + G++V GN V I E Y +M
Sbjct: 49 -----------PKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMTTLQYNALISFANGKIAM 97
Query: 124 VMHVVRG 130
++ G
Sbjct: 98 TKSIISG 104
>gi|332669187|ref|YP_004452195.1| flagellar basal-body rod protein FlgB [Cellulomonas fimi ATCC 484]
gi|332338225|gb|AEE44808.1| flagellar basal-body rod protein FlgB [Cellulomonas fimi ATCC 484]
Length = 115
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 18/123 (14%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F + + L+ RQ+ +++N+AN TP + A+ + FE L +
Sbjct: 9 FVALNSALDGLALRQRSIADNVANIQTPGFHARRVR-FEDELTRAVA------------- 54
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
H + V + + +GN V + E + Y+L T+ + + V
Sbjct: 55 ----HGDGAVQASTSRSLEPTRENGNNVNLDAETLLNIDTNLRYQLATQAVSGQFASVRT 110
Query: 127 VVR 129
+R
Sbjct: 111 AMR 113
>gi|255305269|ref|ZP_05349441.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
Length = 105
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 23/127 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + I + + R + ++ NIAN +T Y+ + +FE LN
Sbjct: 1 MNTYDIIKMALDATNLRSQTIANNIANINTEGYK-RHYVTFEETLNDAM----------- 48
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
IE +D + G++V GN V I E Y +M
Sbjct: 49 -----------PKIEEKIDNSKGLRVDGNNVDIEEEKVNQAMATLQYNALISFANGKIAM 97
Query: 124 VMHVVRG 130
++ G
Sbjct: 98 TKSIISG 104
>gi|255099412|ref|ZP_05328389.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
Length = 105
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 23/127 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + I + + R + ++ NIAN +T Y+ + +FE LN
Sbjct: 1 MNTYDIIKMGLDATNLRSQTIANNIANINTEGYK-RHYVTFEETLNDAM----------- 48
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
IE D + G++V GN V I E Y +M
Sbjct: 49 -----------PKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMTTLQYNALISFANGKIAM 97
Query: 124 VMHVVRG 130
++ G
Sbjct: 98 TKSIISG 104
>gi|254973909|ref|ZP_05270381.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
gi|255091295|ref|ZP_05320773.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
gi|255312953|ref|ZP_05354536.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
gi|255515712|ref|ZP_05383388.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
gi|255648806|ref|ZP_05395708.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
gi|260682025|ref|YP_003213310.1| flagellar basal-body rod protein [Clostridium difficile CD196]
gi|260685623|ref|YP_003216756.1| flagellar basal-body rod protein [Clostridium difficile R20291]
gi|306518921|ref|ZP_07405268.1| flagellar basal-body rod protein [Clostridium difficile QCD-32g58]
gi|260208188|emb|CBA60522.1| flagellar basal-body rod protein [Clostridium difficile CD196]
gi|260211639|emb|CBE01890.1| flagellar basal-body rod protein [Clostridium difficile R20291]
Length = 105
Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 23/127 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + I + + R + ++ NIAN +T Y+ + +FE LN
Sbjct: 1 MNTYDIIKMGLDATNLRSQTIANNIANINTEGYK-RHYVTFEETLNDAM----------- 48
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
IE D + G++V GN V I E Y +M
Sbjct: 49 -----------PKIEEKTDNSKGLRVDGNNVDIEEEKVNQAMATLQYNALISFANGKIAM 97
Query: 124 VMHVVRG 130
++ G
Sbjct: 98 TKSIISG 104
>gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
HTCC2516]
gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
HTCC2516]
Length = 128
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + S R + VSENIAN+ TP YR K ++ F L +S
Sbjct: 8 LDVVASGLRAQSARLRHVSENIANSDTPGYRRKTVT-FRDAFGATAGEVAVGPVRLDDSA 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ AH PL +G G+ V + E+ + + YE N K+ +++ M
Sbjct: 67 LERIFDPAH----PLADESG-HFEGSNVDLLIEIADAREAQRSYEANLKMFEQVRQMSTS 121
Query: 127 VV 128
++
Sbjct: 122 LL 123
>gi|23099007|ref|NP_692473.1| flagellar basal body rod protein FlgB [Oceanobacillus iheyensis
HTE831]
gi|22777235|dbj|BAC13508.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
Length = 130
Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 31 ASTPNYRAKDISSFETILNQNFL---MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGV 87
TP Y+++++ F+ L RT++ HL +S +Q+T
Sbjct: 32 VDTPGYKSQNVV-FKNTLENAMSTIDAKRTNDRHLTFDQTSS-----SPYRHITNQSTTY 85
Query: 88 QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+GN V + E+ + + Y I + V+RG
Sbjct: 86 NHNGNNVDVDKEMAELAKNQIYYNGLIDRINGKFGSLQTVIRG 128
>gi|254519425|ref|ZP_05131481.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA]
gi|226913174|gb|EEH98375.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA]
Length = 141
Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLKE 64
Q + + R+K+++ N+AN +T +++ K SFE L Q F + +T + HL
Sbjct: 20 QFIKLGLDASALREKVIANNMANINTKDFK-KSYVSFEENLTKATQEFSLKKTKKEHLN- 77
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
N +I D++T ++ GN V + E +Y +M
Sbjct: 78 -----RELNDSLISVKQDKSTSMRTDGNNVDMDLEKVNQAANTLMYNALITQANSKLNMT 132
Query: 125 MHVVRG 130
V+ G
Sbjct: 133 KSVISG 138
>gi|283782089|ref|YP_003372844.1| flagellar basal-body rod protein FlgB [Pirellula staleyi DSM 6068]
gi|283440542|gb|ADB18984.1| flagellar basal-body rod protein FlgB [Pirellula staleyi DSM 6068]
Length = 137
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETILNQNFLMARTHETHLKESDS 67
++ N+ R ++ N+AN +TP YR +D+S F+ L + ++++ + +
Sbjct: 14 LAEVLNFAQARHGVLVSNVANINTPGYRTRDLSVSHFQEKLKEAMEVSQSTGSSISPGIV 73
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S + N + + ++ + + L+ + ++ ++
Sbjct: 74 SADPGDPMRSVRASMDNILYHDDTN-IDLEKQVAEINKNQMLHNIALTIMTDQFELLQQA 132
Query: 128 V 128
+
Sbjct: 133 I 133
>gi|4433373|dbj|BAA21014.1| FlgB protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 66
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+ + N ++RQ+I++ NIANA TP Y+A+DI F + L + + R + +
Sbjct: 9 LRFQQEALNLRAQRQEILAANIANADTPGYQARDI-DFASELKKVMVRGREETGGVALT 66
>gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
Length = 129
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ R ++VSENIAN TP YR K ++ + + +AR + S + +
Sbjct: 19 AARLRVVSENIANVDTPGYRRKQLNF--AVTRGDSSLARVEPGRMDLSRTP--LEEVYDP 74
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
PL TG + G+ V + EL + + YE N K+ + M
Sbjct: 75 SHPLADETGKYL-GSNVDLMIELADAREAQRSYEANLKMFDQTRQM 119
>gi|315281375|ref|ZP_07870012.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL S4-120]
gi|313614972|gb|EFR88479.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL S4-120]
Length = 133
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSSNIANANTPNFKASEASFEESFGASLRASGQSSTESTGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+++ + + + GN V +T+E+ +Y L + NS
Sbjct: 72 AGTNTDETNAKITTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
1003]
gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
1003]
Length = 131
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ +++ S R + VSENIANA TP Y + + FE + Q A L
Sbjct: 6 STLSVSASGLKAQSMRLRHVSENIANADTPGYH-RKVVRFEELAAQKDGGAT--GVELGP 62
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLN 121
+ G+ V + E+ + + YE N ++ ++++
Sbjct: 63 VELDQKELARIYDPGSPLADENGYYDGSNVDLVVEIADARQAQRSYEANLRMFDQTRQMS 122
Query: 122 SMVMHVVR 129
S +M ++R
Sbjct: 123 SALMELLR 130
>gi|309388814|gb|ADO76694.1| flagellar basal-body rod protein FlgB [Halanaerobium praevalens DSM
2228]
Length = 128
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHET 60
+I ++ + R ++++ N+AN STP Y+ +DI F++ L + + + T +
Sbjct: 4 LEIITRALAGSARRGELIANNLANVSTPGYKRQDI-DFKSALKKEISAKNSVSLKTTRKN 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
HL S + + + N+V + E+ + Y
Sbjct: 63 HLPFS-------KQYRSLNGNENNRSYRNDDNSVDVDVEMAELAKNSIYYS 106
>gi|313673747|ref|YP_004051858.1| flagellar basal-body rod protein flgb [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940503|gb|ADR19695.1| flagellar basal-body rod protein FlgB [Calditerrivibrio
nitroreducens DSM 19672]
Length = 134
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 31 ASTPNYRAKDISSFETILNQ------NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQT 84
TPNY+AK + F ++ + + T++ H+K + + L
Sbjct: 33 VDTPNYKAKKLE-FSEVMKEYFSGGSKLPLMTTNDRHIKGT----YNVTDPDSFVRLQNN 87
Query: 85 TGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
++ GN V + E+ + Y + +++I + + ++G
Sbjct: 88 PSLRNDGNDVNLDYEMSEMAKNGIQYSMFSQIIAGKFTGLKSAIQG 133
>gi|332799170|ref|YP_004460669.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
gi|332696905|gb|AEE91362.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
Length = 134
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 10/109 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-----NQNFLMARTHETHL 62
+ + + +R +++S N+AN TP Y+ + SFE IL + +A T++ H+
Sbjct: 9 DVMEKLLDVKLKRYELISNNLANVDTPGYKRMGM-SFEEILMNSLNQRTIPLAATNDKHI 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ + + N V I E+ + + Y
Sbjct: 68 DP-RKKLEDIKPKIYR---QEDYSFRNDENNVDIDKEMVEMIKNNFSYN 112
>gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
Length = 130
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKE 64
I++ S R + VSENI+NA TP YR K + FE + L+ + L
Sbjct: 8 LSISASALQAQSTRLRHVSENISNADTPGYRRKTV-PFEAVRDLSADVEKVSVGPVRLDR 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM- 123
SD ++ +H PL +G G+ V + E+ + + YE N K+ ++ M
Sbjct: 67 SDLEQVYDPSH----PLADDSG-HYKGSNVDLMIEIADAREAQRSYEANLKMFEQGRQMS 121
Query: 124 --VMHVVR 129
+M ++R
Sbjct: 122 SSLMDLLR 129
>gi|170022968|ref|YP_001719473.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
YPIII]
gi|169749502|gb|ACA67020.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
YPIII]
Length = 158
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 27/150 (18%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------FLMARTHE 59
+ R +++S N+AN +TPN++AKDI F + + R+
Sbjct: 9 LGVHPMAMQLRLTRAELLSANLANVNTPNFQAKDI-DFAAEMQRAKRGNGVMAAPDRSSA 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQ-------------------TTGVQVSGNTVGITNEL 100
L SS +A + A + + GNTV + E
Sbjct: 68 QMLSTQMSSTQMSSAQMSSAQMSSPQMMSSPQIMSSPQIKYRLPYQPSLDGNTVALNVEQ 127
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ Y+ + + + + + G
Sbjct: 128 AEFSKNALDYQTSLSFLNMKLTGLKQAIEG 157
>gi|220913735|ref|YP_002489044.1| flagellar basal-body rod protein FlgB [Arthrobacter
chlorophenolicus A6]
gi|219860613|gb|ACL40955.1| flagellar basal-body rod protein FlgB [Arthrobacter
chlorophenolicus A6]
Length = 113
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ +T +AS + L+ RQ+ ++ NIAN +TPNY+AK + SFE L + H +
Sbjct: 2 LESVTSAALASA-LDGLALRQRTIANNIANINTPNYKAKRV-SFEDELAASVRRGNGHTS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+EA L+ T Q++GN V + E + Y+ + +
Sbjct: 60 --------------ASVEASLEPT---QLNGNNVNLDTETLSNIDTVLRYQFAARAVNGQ 102
Query: 121 NSMVMHVVR 129
+ + +R
Sbjct: 103 FTSLRAAMR 111
>gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
Length = 130
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+++ ++R VSENIANA TP YR K + SFET + + +
Sbjct: 6 NALSVSASGLKAQAQRLVHVSENIANADTPGYRRKTV-SFETAFAGSEGTGAVEVSRVNL 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL---IKKLN 121
+ PL TG G+TV + E+ + + YE N K+ +++++
Sbjct: 65 DRR--ELQKIYDPSHPLADETGHYQ-GSTVDLMIEIADAREAQRSYEANLKMFDQVRQMS 121
Query: 122 SMVMHVVR 129
+ +M ++R
Sbjct: 122 AGLMDLLR 129
>gi|229017031|ref|ZP_04173951.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
gi|229023212|ref|ZP_04179723.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
gi|228738137|gb|EEL88622.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
gi|228744302|gb|EEL94384.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
Length = 177
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
S + N+L ++ VS NIANA+TP Y+A+ ++ F +N N + + + LK +
Sbjct: 50 VSHYMNYLVTKRNTVSSNIANANTPGYKAQGVT-FAEQMNMNNPLFKKNAADLKSNSDLY 108
Query: 70 LHWNAHVIEAPLDQTT--------GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
H+ A + T GN+V +T E+ LY ++ I
Sbjct: 109 QTNEMHLPTANMKNTYAKIQTKLMQTNKDGNSVDVTTEMLDLMKTNQLYGISINAINTQY 168
Query: 122 SMVMHVVRG 130
+ + RG
Sbjct: 169 A-INQAARG 176
>gi|254932010|ref|ZP_05265369.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HPB2262]
gi|290894007|ref|ZP_06556982.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J2-071]
gi|290556453|gb|EFD89992.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J2-071]
gi|293583562|gb|EFF95594.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HPB2262]
gi|332311134|gb|EGJ24229.1| Flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
Scott A]
Length = 133
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF + L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D + + + GN V +T+E+ +Y L + NS
Sbjct: 72 AGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|167037672|ref|YP_001665250.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750737|ref|ZP_05491622.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter
ethanolicus CCSD1]
gi|307264863|ref|ZP_07546425.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter wiegelii
Rt8.B1]
gi|320116087|ref|YP_004186246.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389486|ref|ZP_08211053.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter
ethanolicus JW 200]
gi|166856506|gb|ABY94914.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750320|gb|EEU63339.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter
ethanolicus CCSD1]
gi|306920121|gb|EFN50333.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter wiegelii
Rt8.B1]
gi|319929178|gb|ADV79863.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994491|gb|EGD52916.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter
ethanolicus JW 200]
Length = 135
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 32 STPNYRAKDISSFETILNQNFLMAR-----THETHLKESDSSGLHWNAHVIEAPLDQTTG 86
TPN++ ++ FE IL + T+ H+ + +I+ T
Sbjct: 34 DTPNFKRSEVK-FEDILKDAINGTKLRGYVTNPKHIPIGPPAIDSIQPEIIQV---NDTS 89
Query: 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+++ GN V I E+ + Y + + + +M V+
Sbjct: 90 MRLDGNNVDIDAEMANLAKNQLYYYALVQRVSGELNSIMTAVK 132
>gi|284041506|ref|YP_003391846.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM
14684]
gi|283945727|gb|ADB48471.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM
14684]
Length = 117
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 15/119 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
S RQ++++ N+AN +TP Y+ +D+ F + L + +SG
Sbjct: 11 LESALRGSSMRQELLTNNLANINTPGYQRQDL-DFHSALQ--------------AAQASG 55
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
D + V+ G+ + E Y+ +++ +++ +
Sbjct: 56 NDPTEVTFRPSTDPSRVVRPDGSGLDADQESAALAKNTLEYQALVQVMGARTAIMQTAL 114
>gi|167770223|ref|ZP_02442276.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM
17241]
gi|167667545|gb|EDS11675.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM
17241]
Length = 120
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 17/113 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N L+ Q I+ N+AN TP Y+AK + FE +L ++ + K +
Sbjct: 8 FQAMRSSLNGLAIEQNIILHNLANYETPGYKAKSVK-FEDVLKESSRKDGSGRYDFKATV 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ T ++ GN V E K Y L +K
Sbjct: 67 F-------------EQEDTTMRPDGNNVDSDVESLKLYEN---YVQTLYLYQK 103
>gi|167040333|ref|YP_001663318.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter sp. X514]
gi|300914417|ref|ZP_07131733.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter sp. X561]
gi|307724347|ref|YP_003904098.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter sp. X513]
gi|166854573|gb|ABY92982.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter sp. X514]
gi|300889352|gb|EFK84498.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter sp. X561]
gi|307581408|gb|ADN54807.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter sp. X513]
Length = 135
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 32 STPNYRAKDISSFETILNQNFLMAR-----THETHLKESDSSGLHWNAHVIEAPLDQTTG 86
TPN++ ++ FE IL + T+ H+ + +++ T
Sbjct: 34 DTPNFKRSEVK-FEDILKDAINGTKLRGYVTNPKHIPIGPPAIDSIQPEIVQV---NDTS 89
Query: 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+++ GN V I E+ + Y + + + +M V+
Sbjct: 90 MRLDGNNVDIDAEMANLAKNQLYYYALVQRVSGELNSIMTAVK 132
>gi|310659048|ref|YP_003936769.1| flagellar basal-body rod protein [Clostridium sticklandii DSM 519]
gi|308825826|emb|CBH21864.1| flagellar basal-body rod protein [Clostridium sticklandii]
Length = 130
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN----FLMARTHETHLKESDSS 68
N + R + +++N+AN +TPNY+ +++ SFE L+++ +T+ H+ ++
Sbjct: 12 ALNAYNLRNETINKNLANVNTPNYK-REVVSFEEYLDKSKNNYITGFKTNNKHIDIPSNN 70
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
D + + GN V E Y + I + +
Sbjct: 71 PSVP----YTIKRDMSVSTREDGNNVNADVEAANQVKNTVNYNAVIQRISSNFQTLKTAI 126
Query: 129 RG 130
+G
Sbjct: 127 KG 128
>gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
Y4I]
gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
Y4I]
Length = 130
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKE 64
+ + + R + VSENI+NA TP YR K + FE++ L + RT L
Sbjct: 8 LSVTASGLKAQAARLRHVSENISNADTPGYRRKAV-PFESVRELRTDVEHVRTGRVTLDR 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM- 123
S+ ++ +H PL +G G+ V + E+ + + YE N K+ ++ SM
Sbjct: 67 SELEKVYDPSH----PLADESG-HFEGSNVDLMIEIADAREAQRSYEANLKMFEQTRSMS 121
Query: 124 --VMHVVR 129
+M ++R
Sbjct: 122 ASLMELLR 129
>gi|152965613|ref|YP_001361397.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
SRS30216]
gi|151360130|gb|ABS03133.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
SRS30216]
Length = 116
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 14/115 (12%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
N L RQ+ +++NI+N +TP Y A ++ FE L D+
Sbjct: 12 ALNGLQARQRAIADNISNINTPGYLANKVA-FENELKSAVATG----------DAGAAAV 60
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ + L+ T + GN V + E Y+ + SM+
Sbjct: 61 SGIATQKSLEPT---REDGNNVNLDEETISGISTNLSYQTVLSALNSKYSMLRTA 112
>gi|225375314|ref|ZP_03752535.1| hypothetical protein ROSEINA2194_00939 [Roseburia inulinivorans DSM
16841]
gi|225212803|gb|EEG95157.1| hypothetical protein ROSEINA2194_00939 [Roseburia inulinivorans DSM
16841]
Length = 131
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + + A+ R+ + N+AN TP Y+ +++ FE++L + ++ K
Sbjct: 8 DYINVLDKAADASWLRETAIMNNLANTDTPGYKRQEV-DFESVLQRELGHSKYTTLDKKI 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ +V ++ N V E + Y+ T I + +
Sbjct: 67 RSLNADLSGLNVSTHTDSSNYSYRLDRNNVDPDTENVELASETIRYQALTNSITSDFTRM 126
Query: 125 MHVVR 129
V++
Sbjct: 127 QAVLK 131
>gi|187932920|ref|YP_001885038.1| flagellar basal body rod protein FlgB [Clostridium botulinum B str.
Eklund 17B]
gi|187721073|gb|ACD22294.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B str.
Eklund 17B]
Length = 133
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHET 60
+ + + R K ++ N+AN +T Y+ ++ E + N ++ + T+
Sbjct: 10 DTYNLLKDGLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSDKKDLSLKITNSR 69
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKK 119
HL+ ++ IE ++ T ++ N V + E Y L TKL K
Sbjct: 70 HLRGNNDLNGD-----IEVVREENTSMRTDDNNVDLELEKVNQAANTLKYNALITKLNGK 124
Query: 120 LNSMVMHVVR 129
NS + V++
Sbjct: 125 FNS-LKTVIK 133
>gi|47091673|ref|ZP_00229469.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
4b H7858]
gi|226223341|ref|YP_002757448.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
Clip81459]
gi|254824010|ref|ZP_05229011.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J1-194]
gi|47019992|gb|EAL10729.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
4b H7858]
gi|225875803|emb|CAS04506.1| Putative flagellar basal-body rod protein FlgB [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293593238|gb|EFG00999.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
J1-194]
gi|328467275|gb|EGF38355.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 1816]
Length = 133
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFLMARTHETHLKESDSSGL 70
N+L ++VS NIANA+TPN++A + S SF + L + + +L ++++ L
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSTESAGNLTKTNTKHL 71
Query: 71 HWN--AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
++ + GN V +T+E+ +Y L + NS +
Sbjct: 72 AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNSSINTAA 130
Query: 129 RG 130
RG
Sbjct: 131 RG 132
>gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
Length = 130
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+A+ + R + VSENIAN TP YR K I+ FE ++ Q L+ +
Sbjct: 9 SVATSGMKAQASRLRHVSENIANTDTPGYRRKAIT-FEELVTQGRTTGAVETGPLRLDQT 67
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ PL TG +G+ V + E+ + + YE N K+ ++ M
Sbjct: 68 --ELKRVYDPSHPLADDTG-HYNGSNVNLLIEIADAREAQRSYEANLKMFDQVRQM 120
>gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
KLH11]
gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
KLH11]
Length = 128
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
+ + R + VSENI+NA TP YR K + FET+ + + L D +
Sbjct: 12 ASALRAQAARLRHVSENISNADTPGYRRKTV-PFETVKRGGAELVQVGHVKLDRRDPGQI 70
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSMVMHV 127
+ H P+ G G+ V + E+ + + YE N K+ ++++S +M +
Sbjct: 71 YDPGH----PMADEAGYYR-GSNVDLMIEIADAREAQRSYEANLKMFDQTRQMSSSLMDL 125
Query: 128 VR 129
+R
Sbjct: 126 LR 127
>gi|150019083|ref|YP_001311337.1| flagellar basal body rod protein FlgB [Clostridium beijerinckii
NCIMB 8052]
gi|149905548|gb|ABR36381.1| flagellar basal-body rod protein FlgB [Clostridium beijerinckii
NCIMB 8052]
Length = 134
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN----FLMARTHET 60
T +++ Q + R K ++ N+AN +T +Y+ ++ E + NQ + RT+
Sbjct: 10 TTYELIKQGIKASNVRAKTIANNMANVNTKDYKRFNVVFEENLKNQGDFSKLELKRTNPH 69
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
H ++ N I D++T ++ GN V + E Y I
Sbjct: 70 HFSSNN----SNNDDSISIEQDKSTSMRNDGNNVDLDIEKVNQAANTLKYNALITDINNR 125
Query: 121 NSMVMHVVR 129
+ + V++
Sbjct: 126 FNNLKAVIK 134
>gi|284989559|ref|YP_003408113.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus
DSM 43160]
gi|284062804|gb|ADB73742.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus
DSM 43160]
Length = 115
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 16/118 (13%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
N L++RQ++ ++NIAN TP + A + FET L +T + + +H
Sbjct: 12 SALNGLAQRQRVTADNIANLQTPGFLAGRV-DFETGLRGALTSGQT-----PTATTGTVH 65
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ + GN V + E + Y+L + +++ +R
Sbjct: 66 RSLEPTR----------MDGNNVNLDAETVIATETGLRYQLALNALDGKYNVMRTALR 113
>gi|57242333|ref|ZP_00370272.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
RM3195]
gi|57017013|gb|EAL53795.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
RM3195]
Length = 143
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 9/136 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--NQNFLMARTH 58
+ P ++ + + R ++++ N+AN TP Y+A+D+ FET L N + +
Sbjct: 2 INPFKSKELVTSALAGRNLRNQLINSNLANVDTPFYKARDVE-FETALVRRANEIFKKEQ 60
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYEL 112
L+ + +S H P T + NTV + E + +
Sbjct: 61 GKELELAKTSDNHQEPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITA 120
Query: 113 NTKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 121 LDGVLRRQSNIFSSII 136
>gi|313610105|gb|EFR85430.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
F2-208]
Length = 133
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSIESAGNLTKTNTKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L +D + + + GN V +T+E+ +Y L + N
Sbjct: 71 LAGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|188588215|ref|YP_001920199.1| flagellar basal body rod protein FlgB [Clostridium botulinum E3
str. Alaska E43]
gi|188498496|gb|ACD51632.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E3
str. Alaska E43]
Length = 133
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHET 60
+ + + R K ++ N+AN +T Y+ ++ E + N ++ + T+
Sbjct: 10 DTYSLLKDGLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSNTKDLSLKTTNSR 69
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKK 119
HL+ ++ IE +++T ++ N V + E Y L TKL K
Sbjct: 70 HLRGNNDLNGD-----IEVVREESTSMRTDDNNVDLELEKVNQAANTLKYNALITKLNGK 124
Query: 120 LNSMVMHVVR 129
N+ + V++
Sbjct: 125 FNN-LKTVIK 133
>gi|217965192|ref|YP_002350870.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HCC23]
gi|217334462|gb|ACK40256.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
HCC23]
gi|307570249|emb|CAR83428.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
Length = 133
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF + L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D + + + GN V +T+E+ +Y L + NS
Sbjct: 72 AGTDIDETNAKLTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|46906961|ref|YP_013350.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
serotype 4b str. F2365]
gi|47095276|ref|ZP_00232887.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
1/2a F6854]
gi|224498792|ref|ZP_03667141.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
Finland 1988]
gi|254829367|ref|ZP_05234054.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N3-165]
gi|254900054|ref|ZP_05259978.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
J0161]
gi|254911393|ref|ZP_05261405.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
J2818]
gi|254935720|ref|ZP_05267417.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
F6900]
gi|254993618|ref|ZP_05275808.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J2-064]
gi|255025678|ref|ZP_05297664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J2-003]
gi|46880227|gb|AAT03527.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
serotype 4b str. F2365]
gi|47016347|gb|EAL07269.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
1/2a F6854]
gi|258601780|gb|EEW15105.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N3-165]
gi|258608303|gb|EEW20911.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
F6900]
gi|293589330|gb|EFF97664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
J2818]
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSTESAGNLTKTNTKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L +D + + + GN V +T+E+ +Y L + N
Sbjct: 71 LAGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
Length = 130
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHL 62
+ + + R + VSENI+NA TP YR K + FE L + +T L
Sbjct: 6 NSLSVTASGLKAQATRLRHVSENISNADTPGYRRKSV-PFEAARDLENDVERVKTGRVVL 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
SD ++ +H PL +G G+ V + E+ + + Y+ N K+ ++
Sbjct: 65 DRSDLENVYDPSH----PLADESG-HYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRG 119
Query: 123 M---VMHVVR 129
M +M ++R
Sbjct: 120 MSASLMDLLR 129
>gi|16799793|ref|NP_470061.1| flagellar basal body rod protein FlgB [Listeria innocua Clip11262]
gi|16413170|emb|CAC95950.1| lin0718 [Listeria innocua Clip11262]
gi|313620053|gb|EFR91568.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL S4-378]
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGASLRASGSNNIESTGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D + + + GN V +T+E+ +Y L + NS
Sbjct: 72 AGTDIDETNAKLTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
Y25]
gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
Y25]
Length = 127
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
T IA+ + R + SENIANA TP Y + + SF + N L
Sbjct: 6 TTLSIAASGMQAQASRMRFTSENIANADTPGYH-RKLVSFRAA-HANDGTVEASRVRLDR 63
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + ++ AH + SG+ V + E+ + YE N K+ ++ M
Sbjct: 64 APLAEIYDPAHPL-----ANDQGNYSGSNVDLLIEIADAREASRSYEANLKVFDQVRQMS 118
Query: 125 MHVV 128
++
Sbjct: 119 TSLL 122
>gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
BS107]
gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
2.10]
gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
2.10]
gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
BS107]
Length = 130
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI--LNQNFLMARTHETHLKE 64
+++ + R + VSENI+NA TP YR K + FE + L + L
Sbjct: 8 LSVSASALKAQASRLRHVSENISNADTPGYRRKTV-PFEAVRDLRSDVEKVEVGPVRLDR 66
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM- 123
SD + +H PL +G G+ V + E+ + + YE N K+ ++ M
Sbjct: 67 SDLEQVFDPSH----PLADESG-HYEGSNVDLMIEIADAREAQRSYEANLKMFEQGRQMS 121
Query: 124 --VMHVVR 129
+M ++R
Sbjct: 122 SSLMDLLR 129
>gi|116872099|ref|YP_848880.1| flagellar basal body rod protein FlgB [Listeria welshimeri serovar
6b str. SLCC5334]
gi|116740977|emb|CAK20097.1| flagellar basal-body rod protein FlgB [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF + L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGGNSIESTGNLTKTNAKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D + + + GN V +++E+ +Y L + NS
Sbjct: 72 AGTDLDETNAKLTTK------SGSINEDGNNVNVSSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|313624694|gb|EFR94651.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL J1-023]
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGASLRSSGSNNIESTGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+D + + + GN V +T+E+ +Y L + NS
Sbjct: 72 AGTDLDETNAKLTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYNS 124
Query: 123 MVMHVVRG 130
+ RG
Sbjct: 125 SINTAARG 132
>gi|251780661|ref|ZP_04823581.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243084976|gb|EES50866.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN----QNFLMARTHET 60
+ + + R K ++ N+AN +T Y+ ++ E + N ++ + T+
Sbjct: 10 DTYSLLKDGLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSDAKDLSLKTTNSR 69
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLIKK 119
HL+ ++ + IE +++T ++ N V + E Y L TKL K
Sbjct: 70 HLRGNNDLNGN-----IEVVREESTSMRTDDNNVDLELEKVNQAANTLKYNALITKLNGK 124
Query: 120 LNSMVMHVVR 129
N+ + V++
Sbjct: 125 FNN-LKTVIK 133
>gi|16802752|ref|NP_464237.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
EGD-e]
gi|224501985|ref|ZP_03670292.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
R2-561]
gi|254830299|ref|ZP_05234954.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
10403S]
gi|284801040|ref|YP_003412905.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5578]
gi|284994182|ref|YP_003415950.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5923]
gi|16410099|emb|CAC98788.1| lmo0710 [Listeria monocytogenes EGD-e]
gi|284056602|gb|ADB67543.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5578]
gi|284059649|gb|ADB70588.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
08-5923]
Length = 133
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSAESAGNLTKTNTKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L +D + + + GN V +T+E+ +Y L + N
Sbjct: 71 LAGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|255022491|ref|ZP_05294477.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J1-208]
Length = 133
Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSIESAGNLTKTNTKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L +D + + + GN V +T+E+ +Y L + N
Sbjct: 71 LAGTDIDETNAKLTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|254853086|ref|ZP_05242434.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
R2-503]
gi|255521220|ref|ZP_05388457.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
J1-175]
gi|300764523|ref|ZP_07074516.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N1-017]
gi|258606435|gb|EEW19043.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
R2-503]
gi|300514877|gb|EFK41931.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
N1-017]
Length = 133
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSTESAGNLTKTNTKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L ++ + + + GN V +T+E+ +Y L + N
Sbjct: 71 LAGTEIDETNAKVTTK------SGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|315638444|ref|ZP_07893621.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
JV21]
gi|315481435|gb|EFU72062.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
JV21]
Length = 143
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 9/136 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--NQNFLMARTH 58
+ P ++ + + R ++++ N+AN TP Y+A+D+ FET L N + +
Sbjct: 2 INPFKSKELVTSALAGRNLRNQLINSNLANVDTPFYKARDVE-FETALVRRANEIFKKDK 60
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYEL 112
L+ + +S H P T + NTV + E + +
Sbjct: 61 GQELELAKTSDNHQEPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITA 120
Query: 113 NTKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 121 LDGVLRRQSNIFSSII 136
>gi|239628952|ref|ZP_04671983.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519098|gb|EEQ58964.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 118
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 17/122 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + +Q++ S NIAN TP ++AK + F+ +L +
Sbjct: 9 LGALERGMDAMWLKQQVSSHNIANVETPGFKAKKVE-FKDVLRETEQGVE---------- 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
V+E D T + GN V + E + Y T + + + +
Sbjct: 58 ----RIAKPVVE--EDAATQARPDGNNVQVEKEELELWKAYSQYSALTMRMSGKLTTLRY 111
Query: 127 VV 128
V+
Sbjct: 112 VI 113
>gi|320535378|ref|ZP_08035492.1| flagellar basal-body rod protein FlgB [Treponema phagedenis F0421]
gi|320147780|gb|EFW39282.1| flagellar basal-body rod protein FlgB [Treponema phagedenis F0421]
Length = 136
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I + + + + R + + N+ANA P ++ ++ SFE+ L + + + +
Sbjct: 5 IKTTDLLHRALDVNALRYTVTANNLANAEVPEFKRTEV-SFESELKRALDSEKNKDGFFE 63
Query: 64 ESDSSGLHWNAHVI-------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
++ + VI LD + V+ +GN V E I+ Y+L +++
Sbjct: 64 QATKGSNLLSDEVIDYRSVEPRRVLDYISTVKANGNNVDAEEEAMNILKIQMQYQLLSQM 123
Query: 117 IKKLNSMVMHVVR 129
S V V+R
Sbjct: 124 AGFQYSQVQSVLR 136
>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3]
Length = 135
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + R + VSENI+NA TP YR K + FE ++ + R +K
Sbjct: 13 LSVTASALRAQATRLRHVSENISNADTPGYRRKTV-PFEVERGRDDGVERVTTGRVKLDR 71
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM--- 123
+ PL TG G+ V + E+ + + YE N KL + M
Sbjct: 72 R--QLPDIFDPSHPLADETGHYQ-GSNVDLMIEIADAREAQRSYEANLKLFDQARQMSAS 128
Query: 124 VMHVVR 129
+M ++R
Sbjct: 129 LMELLR 134
>gi|119715009|ref|YP_921974.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
gi|119535670|gb|ABL80287.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
Length = 118
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 16/124 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + + ++ RQ++ ++NIAN TP YRA + FET L
Sbjct: 8 PVSSVLNAALDGIALRQRVTADNIANVDTPGYRASSV-DFETSLRAAIAA---------- 56
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
L T V +GN V + E + ++ Y++ T+ +++
Sbjct: 57 -----GDPAGAAPGELLATDTPVGANGNNVDLRKETLAAVQSQFQYQILTRATTDRFALI 111
Query: 125 MHVV 128
Sbjct: 112 KTAA 115
>gi|256376476|ref|YP_003100136.1| flagellar basal-body rod protein FlgB [Actinosynnema mirum DSM
43827]
gi|255920779|gb|ACU36290.1| flagellar basal-body rod protein FlgB [Actinosynnema mirum DSM
43827]
Length = 118
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
L+ RQ++ + NIAN TP + A + +FE L + G
Sbjct: 10 VRAALTGLAMRQRVSANNIANVQTPGFIASKV-NFEESLGEAVRSGE------------G 56
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
D + GN V I E + Y+L + + S V++
Sbjct: 57 STAVRGTRPVISDSVNAARQDGNNVNIDEETVSATDTNLRYQLMLRALDNKYSGFSAVLK 116
>gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
Length = 130
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE-TILNQNFLMARTHETHLK 63
+ + ++R + VSENI+NA TP YR K + L + T L
Sbjct: 6 NSLNVTASGLKAQAKRLRHVSENISNADTPGYRRKTVPFLAVRELQNDAEKVETGRVTLD 65
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ + ++ H P+ TG G+ V + E+ + + Y+ N K+ ++ SM
Sbjct: 66 RTELTNIYDPTH----PMADDTG-HYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRSM 120
Query: 124 ---VMHVVR 129
+M ++R
Sbjct: 121 SASLMDLLR 129
>gi|299131775|ref|ZP_07024970.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
gi|298591912|gb|EFI52112.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
Length = 141
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + IA+ + R +++SENIANA T YR + + +F + L++
Sbjct: 5 MDFLKSMSIATSGLRAQAGRMRVISENIANADSTASTAGGDPYR-RKVPTFSSTLDRTLD 63
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+K +S D V+ V E+ + YE N
Sbjct: 64 AQVVSLGRVKTDTTSSFRIKHEPGNPAADANGNVKYP--NVNSLVEMTDMREAQRSYEAN 121
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 122 LNIISATRRMIQRTL 136
>gi|116327146|ref|YP_796866.1| flagellar basal body rod protein FlgB [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116332197|ref|YP_801915.1| flagellar basal body rod protein FlgB [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116119890|gb|ABJ77933.1| Endoflagellar proximal basal body rod protein [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116125886|gb|ABJ77157.1| Endoflagellar proximal basal body rod protein [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 143
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR----------- 56
+ + N ++K++S+NIANA P+++ ++ FE+++ + +
Sbjct: 12 DLLERGMNNSILKRKVISDNIANADVPHFKRSEVI-FESMIKRAIESEKIETLKEVPTQI 70
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ E H++ L + + +D T ++ GN V + E+ ++ + + Y + T+
Sbjct: 71 SDERHIQF--FKPLDYREVQPKTNIDYLTTMRADGNNVDVEKEVVEASNSQMQYMIMTER 128
Query: 117 IKKLNSMVMHVVR 129
+ + + V+R
Sbjct: 129 LNQNYRDLKQVMR 141
>gi|146278635|ref|YP_001168794.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
17025]
gi|145556876|gb|ABP71489.1| protein of unknown function DUF1078 domain protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 126
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ R + VSENIAN TP + K + SF++ + + T L S ++
Sbjct: 15 MRSQALRLRHVSENIANVDTPGFHRKTV-SFQSEPDSG--LVSTGPVRLDRSSLQKMYDP 71
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
H P+ TG G+ V + E+ + + YE N ++ + M
Sbjct: 72 GH----PMADDTGY-YDGSNVNLVVEIADAREAQRSYEANLRMFDQARQMTQS 119
>gi|24213047|ref|NP_710528.1| flagellar basal body rod protein FlgB [Leptospira interrogans
serovar Lai str. 56601]
gi|45656203|ref|YP_000289.1| flagellar basal body rod protein FlgB [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|24193738|gb|AAN47546.1| flagellar basal body rod protein FlgB [Leptospira interrogans
serovar Lai str. 56601]
gi|45599437|gb|AAS68926.1| flagellar basal-body rod protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 143
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR----------- 56
+ + N ++K++S+NIANA P+++ ++ FE+++ + +
Sbjct: 12 DLLERGMNNSIFKRKVISDNIANADVPHFKRSEVI-FESMIKRAIESEKIEAIKEVPTQI 70
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ E H++ L + +A D T ++ GN V + E+ ++ + + Y + +
Sbjct: 71 SDERHIQF--FKPLDYREVQPKANTDYLTTMRADGNNVDVEKEVVEASNSQMQYMMMAER 128
Query: 117 IKKLNSMVMHVVR 129
I + + V+R
Sbjct: 129 INQNYRELKQVMR 141
>gi|182418468|ref|ZP_02949762.1| flagellar basal-body rod protein FlgB [Clostridium butyricum 5521]
gi|237666504|ref|ZP_04526489.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182377850|gb|EDT75394.1| flagellar basal-body rod protein FlgB [Clostridium butyricum 5521]
gi|237657703|gb|EEP55258.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 148
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETH 61
+ + + R K +S N+AN +T NY+ + E + N + F + T++ H
Sbjct: 10 NTYDLLKLGLKASNLRAKTISNNMANINTKNYKKFGVVFEENLKNNSKSEFKLRTTNQNH 69
Query: 62 LKESDSSGLHWN-----------AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ S + I D++T ++ GN V + E Y
Sbjct: 70 YTINSSDLRTTREGHLHDEKDTYGNNITIQQDKSTSMRSDGNNVDLEIEKVNQAANTLKY 129
Query: 111 E-LNTKLIKKLNSMVMHVVR 129
L T + K N M V++
Sbjct: 130 NALITSINNKFNGM-KSVIK 148
>gi|209884536|ref|YP_002288393.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
OM5]
gi|209872732|gb|ACI92528.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
OM5]
Length = 141
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-TPN------YRAKDISSFETILNQNFL 53
M + IA+ + R +++SENIANA T YR + + +F + L+++
Sbjct: 5 MDFLKSMSIATSGLRAQAGRMRVISENIANADSTAGTAGGDPYR-RKVPTFVSALDRSLD 63
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+K +S D V+ V E+ + YE N
Sbjct: 64 AQVVSLGRIKTDTASSFRIKHEPGNPAADANGNVKYP--NVNSLVEMTDMREAQRSYEAN 121
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 122 LNIISATRRMIQRTL 136
>gi|222084863|ref|YP_002543392.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
gi|221722311|gb|ACM25467.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
Length = 138
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R ++VSENIANA TP YR K ++ F L++
Sbjct: 1 MDPLSAALKIAGSGLEAQSTRLRVVSENIANARSTGDTPGADPYRRKTVT-FGAELDRAN 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + E D+ DQ V++ V I E+ YE
Sbjct: 60 GVTTVGVKKMGE-DTGKFVEQYDPDNPAADQKGYVKMP--NVNILVEMADMREANRSYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + +++ ++ +
Sbjct: 117 NLQTVRQARDLISSTI 132
>gi|332297606|ref|YP_004439528.1| flagellar basal-body rod protein FlgB [Treponema brennaborense DSM
12168]
gi|332180709|gb|AEE16397.1| flagellar basal-body rod protein FlgB [Treponema brennaborense DSM
12168]
Length = 138
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + + + R ++ + N+AN+ PN++ + +FE+ L + R + + +
Sbjct: 9 DMLHRAMDASTLRYQVSANNLANSEVPNFK-RTSVNFESQLKRALESERNAKDSFQMITT 67
Query: 68 SGLHWNAHVI--------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + D T + +GN V E + + Y+L T++
Sbjct: 68 DDRHIASEGAIDYRTVEPRRVTDYLTTAKANGNNVDAEQEAMEILKTQLNYQLLTQMQAF 127
Query: 120 LNSMVMHVVR 129
S + ++
Sbjct: 128 EFSQLKVAMK 137
>gi|254292929|ref|YP_003058952.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
gi|254041460|gb|ACT58255.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
Length = 138
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
Query: 10 ASQHANWLSERQKIVSENIANA----STPNYRA--KDISSFETILNQNFLMARTHETHLK 63
A+ + R ++ +EN+ANA TP + + F+ L++ R + +
Sbjct: 12 AASGLRAQTVRIRVSAENLANANSTGDTPGADPYQRKVPVFKNYLDRESGAERVKVSGV- 70
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+D++ D+ V+ S V E+ + YE N +++ SM
Sbjct: 71 HNDTAPFTVKFDPTHPAADEGGMVKYS--NVSALVEMTDMREAQRAYEANLNVVEASRSM 128
Query: 124 VMHVV 128
++ V
Sbjct: 129 LLAAV 133
>gi|289578437|ref|YP_003477064.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter italicus
Ab9]
gi|297544713|ref|YP_003677015.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528150|gb|ADD02502.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter italicus
Ab9]
gi|296842488|gb|ADH61004.1| flagellar basal-body rod protein FlgB [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 135
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 33 TPNYRAKDISSFETILNQNFLMAR-----THETHLKESDSSGLHWNAHVIEAPLDQTTGV 87
TPN++ ++ FE IL + T+ H+ +++ T +
Sbjct: 35 TPNFKRSEVK-FENILKDAINGTKLRGYITNPKHIPIGPPPVDSIQPEIVQV---NNTSM 90
Query: 88 QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ GN V I E+ + Y + + + +M V+
Sbjct: 91 RLDGNNVDIDAEMANLAKNQLYYYALVQRVSGELNSIMTAVK 132
>gi|254470324|ref|ZP_05083728.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
gi|211960635|gb|EEA95831.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
Length = 136
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M I IA+ + R ++++ENIANA TP YR + + +F + +
Sbjct: 1 MDFIKSMFIAASGLKAQTGRMRVIAENIANADSTGQTPGEDPYR-RKVPTFSSSFDAKVE 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++E S A D+ + NT+ E+ YE N
Sbjct: 60 AELVKLGRVREDKSEFKLRYEPDHPAANDKGYVKMPNVNTLV---EMADMQEATRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
++K SM+ +
Sbjct: 117 LNVVKSSRSMMQKTL 131
>gi|209963543|ref|YP_002296458.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
centenum SW]
gi|209957009|gb|ACI97645.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
centenum SW]
Length = 137
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 1 MQPI-TFFQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P+ + F IA+ + R ++V+EN+ANA TP YR K I F+++L++
Sbjct: 1 MDPLASSFGIAASGMKAQATRLRVVAENMANASSTGETPGADPYRRKTIV-FDSVLDRAL 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ DSS + D V++ V E+ YE
Sbjct: 60 RADTVRVKTIGR-DSSDFRLSYEPGHPAADAKGYVKLP--NVNTLVEMMDMREAGRSYEA 116
Query: 113 NTKLIKKLNSMV 124
N ++++ M+
Sbjct: 117 NLNVLQQARGML 128
>gi|114797235|ref|YP_759001.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
gi|114737409|gb|ABI75534.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
Length = 128
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 1 MQPITFFQI-ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
M P+ Q A S R + +ENI+NA TP Y+ K + ++ L+ +
Sbjct: 1 MNPLKATQQQAVAGMELQSRRMGVTAENISNADTPGYKRKLLMVEQSQLSSGEQFMASRV 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ D + + + D V +S V I E+ YE N ++
Sbjct: 61 ----QLDEAEAKRDYNPEHPMADGEGYVTLS--NVSIVTEMADMREANRSYEANLNSFQQ 114
Query: 120 LNSMVMHVV 128
SM ++
Sbjct: 115 ARSMYRSLL 123
>gi|225871924|ref|YP_002753378.1| putative flagellar basal-body rod protein FlgB [Acidobacterium
capsulatum ATCC 51196]
gi|225793071|gb|ACO33161.1| putative flagellar basal-body rod protein FlgB [Acidobacterium
capsulatum ATCC 51196]
Length = 155
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 24/147 (16%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL----------- 53
+ + + + K+ ++N+AN TP YR +F + Q+
Sbjct: 6 PLADELAHYLDLSALELKVTAQNMANVDTPGYRTVGF-NFAAAMQQSVESLEERRIDRER 64
Query: 54 -MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGV-----------QVSGNTVGITNELY 101
+A TH + S + +A PL + + GN V + E
Sbjct: 65 TIAATHGLNGDGSQGAFAAMDAASYAEPLLPASDAVALHRVGGLLERPDGNDVSVDREGM 124
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ + + +L+++ + VM +
Sbjct: 125 NMAKAQLQFNMGMELLRQEYTRVMDAI 151
>gi|328475671|gb|EGF46420.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 220]
Length = 139
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDIS---SFETILNQNFL--------MARTHETHL 62
N+L ++VS NIANA+TPN++A + S SF + L + + +T+ HL
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHL 71
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
+D + + + GN V +T+E+
Sbjct: 72 AGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMI 104
>gi|119775452|ref|YP_928192.1| flagellar basal body rod protein FlgC [Shewanella amazonensis SB2B]
gi|119767952|gb|ABM00523.1| flagellar basal-body rod protein FlgC [Shewanella amazonensis SB2B]
Length = 137
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F ++ + S R + NIANA + + YRA+ FE L +
Sbjct: 1 MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARH-PVFEAELAKASQQ 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++K S + V + E+ Y++N
Sbjct: 60 QSARGVNVKGIVESDKPLQKEYNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 119
Query: 115 KLIKKLNSMVMHVVR 129
++ SM+M +R
Sbjct: 120 QVADTAKSMLMQTLR 134
>gi|325291941|ref|YP_004277805.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
gi|325059794|gb|ADY63485.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
Length = 139
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITFF-QIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K ++ F + L++
Sbjct: 1 MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVT-FGSELDRVS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ R L +H A + V + E+ Y+
Sbjct: 60 GVQRVTVKKLGVDRGDFVHEYDPGNPAADTSGMVKMPN---VNVLIEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N ++I++ +V +
Sbjct: 117 NLQVIRQTRDLVASTI 132
>gi|218672513|ref|ZP_03522182.1| flagellar basal body rod protein FlgC [Rhizobium etli GR56]
Length = 138
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F +++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRAS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + + D DQ V++ V I E+ Y+
Sbjct: 60 GVETVNVKKV-GVDEGDFSTEFDPSNPAADQKGVVKLP--NVNILVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQTRDLISSTI 132
>gi|222824064|ref|YP_002575638.1| flagellar proximal rod protein FlgB [Campylobacter lari RM2100]
gi|222539286|gb|ACM64387.1| flagellar proximal rod protein FlgB [Campylobacter lari RM2100]
Length = 143
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 15/123 (12%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISS-----------FETILNQNFLMARTHETHLKES 65
+ R ++++ N+AN TP Y+A+DI F+ + MA T+E H K
Sbjct: 18 RNLRSQMINSNLANVDTPFYKARDIEFETALVNRANEIFKKKDTKELEMASTNENHQKPW 77
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
N + L + NTV + E + + ++++ +++
Sbjct: 78 KF----PNPNKSTIYLRDGHLARNDANTVDLDVETTEMSKNTMMITALDGVLRRQSNIFS 133
Query: 126 HVV 128
++
Sbjct: 134 TII 136
>gi|116250480|ref|YP_766318.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255128|emb|CAK06202.1| putative flagellar basal-body rod protein flgc (putative proximal
rod protein) [Rhizobium leguminosarum bv. viciae 3841]
Length = 138
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F ++++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRSN 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ T D DQ V++ V I E+ Y+
Sbjct: 60 GV-ETVGVKKVGVDEGDFSTEFDPSNPAADQKGVVKLP--NVNILVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQTRDLISSTI 132
>gi|209547926|ref|YP_002279843.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533682|gb|ACI53617.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 138
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F +++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRA- 58
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
T + D DQ V++ V I E+ Y+
Sbjct: 59 SGVETVDVKKVGVDEGDFSTEFDPSNPAADQKGVVKLP--NVNILVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQTRDLISSTI 132
>gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040]
gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040]
Length = 130
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + R VSENI+NA TP YR K + SF+++ + +++ +
Sbjct: 8 LSVTASGLRAQAARLTHVSENISNADTPGYRRKTV-SFQSVRDLETDVSQVRVGRVSLDR 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSM 123
+ + PL TG G+ V + E+ + + YE N K+ ++++S
Sbjct: 67 T--ELEQVYDPSHPLADETG-HYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQMSSS 123
Query: 124 VMHVVR 129
+M ++R
Sbjct: 124 LMDLLR 129
>gi|256158120|ref|ZP_05456038.1| flagellar basal body rod protein FlgC [Brucella ceti M490/95/1]
gi|265996637|ref|ZP_06109194.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
gi|262550934|gb|EEZ07095.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
Length = 140
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA T YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIGQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|315301962|ref|ZP_07872958.1| flagellar basal-body rod protein FlgB [Listeria ivanovii FSL
F6-596]
gi|313629669|gb|EFR97806.1| flagellar basal-body rod protein FlgB [Listeria ivanovii FSL
F6-596]
Length = 133
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETIL------------NQNFLMARTHETH 61
N+L ++VS NIANA+T N++A + +SFE L + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASE-TSFEESLGSSLRPSGQNNEATTGSLTKTNSKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L ++ + +++ GN V +T+E+ +Y L + N
Sbjct: 71 LAGTEIDQTNAKVTTKGGSINE------DGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|206895357|ref|YP_002246680.1| flagellar basal-body rod protein FlgB [Coprothermobacter
proteolyticus DSM 5265]
gi|206737974|gb|ACI17052.1| flagellar basal-body rod protein FlgB [Coprothermobacter
proteolyticus DSM 5265]
Length = 113
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 15/122 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + + V N+AN TP Y+ +++ F+T+ + +
Sbjct: 4 DSLKTMMGIVFQNLQAVQSNLANVDTPGYKRQEV-DFQTVFME--------------LQN 48
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G +D TT ++ GN V E+ Y+ T+++ + S V
Sbjct: 49 HGELLQPSSNYVKIDNTTSWRLDGNNVDPDKEITTLIETALWYQGITEMLSRHFSTARQV 108
Query: 128 VR 129
++
Sbjct: 109 LQ 110
>gi|313639043|gb|EFS04032.1| flagellar basal body rod protein FlgB [Listeria seeligeri FSL
S4-171]
Length = 133
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------LMARTHETH 61
N+L ++VS NIANA+T N++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASE-TSFEESLGSSLRPSGQNNETTTGSLTKTNSKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L ++ ++ +++ GN V +T+E+ +Y L + N
Sbjct: 71 LTGTEIDQINAKVTTKGGSINE------DGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|320107019|ref|YP_004182609.1| flagellar basal-body rod protein FlgB [Terriglobus saanensis
SP1PR4]
gi|319925540|gb|ADV82615.1| flagellar basal-body rod protein FlgB [Terriglobus saanensis
SP1PR4]
Length = 120
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
S + + +++ K+ + N+AN TP Y+ + FE + H
Sbjct: 6 PMAAALSHYLDLSTQQMKMTAGNMANVDTPEYKTQGF-DFEREF--------ANALHKPV 56
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + +E + + GN V + E + + ++ +L+K+ S V
Sbjct: 57 GQADSAQIQSAEVEGLVS-----RPDGNNVSMDREAMQLAKTQLQFKTGVELLKREYSRV 111
Query: 125 MHVVR 129
M +R
Sbjct: 112 MDAIR 116
>gi|289433988|ref|YP_003463860.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289170232|emb|CBH26772.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 133
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------LMARTHETH 61
N+L ++VS NIANA+T N++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASE-TSFEESLGSSLRPSGQNNETTTGSLTKTNSKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L ++ + +++ GN V +T+E+ +Y L + N
Sbjct: 71 LTGTEIDQTNAKVTTKGGSINE------DGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|241203104|ref|YP_002974200.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856994|gb|ACS54661.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 138
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F +++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRTN 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ T D D V++ V I E+ Y+
Sbjct: 60 GV-ETVGVKKVGVDEGDFSTEFDPSNPAADPKGVVKLP--NVNILVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQTRDLISSTI 132
>gi|57238272|ref|YP_178647.1| flagellar basal body rod protein FlgB [Campylobacter jejuni RM1221]
gi|148925899|ref|ZP_01809586.1| putative flagellar basal-body rod protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205355384|ref|ZP_03222155.1| putative flagellar basaL body rod protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|57167076|gb|AAW35855.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni RM1221]
gi|145844885|gb|EDK21989.1| putative flagellar basal-body rod protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205346618|gb|EDZ33250.1| putative flagellar basaL body rod protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|284925791|gb|ADC28143.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315057946|gb|ADT72275.1| Flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni S3]
Length = 143
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 9/136 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--NQNFLMARTH 58
+ P ++ + + R ++++ N+AN TP Y+A+DI FET L N + +
Sbjct: 2 INPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIE-FETALVNRANEIFKKND 60
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYEL 112
+ L+ + + H P T + NTV + E + +
Sbjct: 61 KKELELAVTEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITA 120
Query: 113 NTKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 121 LDGVLRRQSNIFSSIL 136
>gi|148558590|ref|YP_001257211.1| flagellar basal body rod protein FlgC [Brucella ovis ATCC 25840]
gi|148369875|gb|ABQ62747.1| flagellar basal-body rod protein FlgC [Brucella ovis ATCC 25840]
Length = 140
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA T YR K + SF L Q A
Sbjct: 8 STLKIAASGLSVQSTRLRIVSENIANAQSTARTADTDPYRRKTV-SFRAELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|57167573|ref|ZP_00366713.1| flagellar basal-body rod protein FlgB [Campylobacter coli RM2228]
gi|305433079|ref|ZP_07402235.1| flagellar basal-body rod protein FlgB [Campylobacter coli JV20]
gi|57020695|gb|EAL57359.1| flagellar basal-body rod protein FlgB [Campylobacter coli RM2228]
gi|304443780|gb|EFM36437.1| flagellar basal-body rod protein FlgB [Campylobacter coli JV20]
Length = 143
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE- 59
+ P ++ + + R ++++ N+AN TP Y+A+DI ++N+ + + ++
Sbjct: 2 INPFKSKELITSALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEIFKKNDN 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYELN 113
L+ + + H P T + NTV + E + +
Sbjct: 62 KELQLAITEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITAL 121
Query: 114 TKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 122 DGVLRRQSNIFSSIL 136
>gi|17989433|ref|NP_542066.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
str. 16M]
gi|62317101|ref|YP_222954.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 1 str.
9-941]
gi|83269093|ref|YP_418384.1| flagellar basal body rod protein FlgC [Brucella melitensis biovar
Abortus 2308]
gi|163844344|ref|YP_001621999.1| flagellar basal body rod protein FlgC [Brucella suis ATCC 23445]
gi|189022366|ref|YP_001932107.1| flagellar basal body rod protein FlgC [Brucella abortus S19]
gi|225628623|ref|ZP_03786657.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
gi|225686010|ref|YP_002733982.1| flagellar basal body rod protein FlgC [Brucella melitensis ATCC
23457]
gi|237816663|ref|ZP_04595655.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
A]
gi|254691414|ref|ZP_05154668.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 6 str.
870]
gi|254695288|ref|ZP_05157116.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 3 str.
Tulya]
gi|254698386|ref|ZP_05160214.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 2 str.
86/8/59]
gi|254699459|ref|ZP_05161287.1| flagellar basal body rod protein FlgC [Brucella suis bv. 5 str.
513]
gi|254706294|ref|ZP_05168122.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
M163/99/10]
gi|254711412|ref|ZP_05173223.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
B2/94]
gi|254712011|ref|ZP_05173822.1| flagellar basal body rod protein FlgC [Brucella ceti M644/93/1]
gi|254715080|ref|ZP_05176891.1| flagellar basal body rod protein FlgC [Brucella ceti M13/05/1]
gi|256014940|ref|YP_003104949.1| flagellar basal body rod protein [Brucella microti CCM 4915]
gi|256029958|ref|ZP_05443572.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
M292/94/1]
gi|256043071|ref|ZP_05446015.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
str. Rev.1]
gi|256059610|ref|ZP_05449808.1| flagellar basal body rod protein FlgC [Brucella neotomae 5K33]
gi|256111945|ref|ZP_05452896.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 3
str. Ether]
gi|256252926|ref|ZP_05458462.1| flagellar basal body rod protein FlgC [Brucella ceti B1/94]
gi|256256600|ref|ZP_05462136.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 9 str.
C68]
gi|256262867|ref|ZP_05465399.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
63/9]
gi|260544339|ref|ZP_05820160.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
gi|260564301|ref|ZP_05834786.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
16M]
gi|260757028|ref|ZP_05869376.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
870]
gi|260762844|ref|ZP_05875176.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
86/8/59]
gi|260882838|ref|ZP_05894452.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
C68]
gi|261215657|ref|ZP_05929938.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
Tulya]
gi|261216790|ref|ZP_05931071.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
gi|261220017|ref|ZP_05934298.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
gi|261313738|ref|ZP_05952935.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
M163/99/10]
gi|261319020|ref|ZP_05958217.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
B2/94]
gi|261319657|ref|ZP_05958854.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
gi|261323579|ref|ZP_05962776.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
gi|261749910|ref|ZP_05993619.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
513]
gi|265986977|ref|ZP_06099534.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
M292/94/1]
gi|265989509|ref|ZP_06102066.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
str. Rev.1]
gi|265993392|ref|ZP_06105949.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
str. Ether]
gi|294853173|ref|ZP_06793845.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
gi|297249956|ref|ZP_06933657.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
B3196]
gi|17985310|gb|AAL54330.1| flagellar basal-body rod protein flgc [Brucella melitensis bv. 1
str. 16M]
gi|62197294|gb|AAX75593.1| FlgC, flagellar basal-body rod rotein FlgC [Brucella abortus bv. 1
str. 9-941]
gi|82939367|emb|CAJ12315.1| Flagellar basal body rod protein:Flagellar basal-body rod protein
FlgC [Brucella melitensis biovar Abortus 2308]
gi|163675067|gb|ABY39177.1| flagellar basal-body rod protein FlgC [Brucella suis ATCC 23445]
gi|189020940|gb|ACD73661.1| Flagellar basal body rod protein [Brucella abortus S19]
gi|225616469|gb|EEH13517.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
gi|225642115|gb|ACO02028.1| flagellar basal-body rod protein FlgC [Brucella melitensis ATCC
23457]
gi|237787476|gb|EEP61692.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
A]
gi|255997600|gb|ACU49287.1| flagellar basal body rod protein [Brucella microti CCM 4915]
gi|260097610|gb|EEW81484.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
gi|260151944|gb|EEW87037.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
16M]
gi|260673265|gb|EEX60086.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
86/8/59]
gi|260677136|gb|EEX63957.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
870]
gi|260872366|gb|EEX79435.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
C68]
gi|260917264|gb|EEX84125.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
Tulya]
gi|260918601|gb|EEX85254.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
gi|260921879|gb|EEX88447.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
gi|261292347|gb|EEX95843.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
gi|261298243|gb|EEY01740.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
B2/94]
gi|261299559|gb|EEY03056.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
gi|261302764|gb|EEY06261.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
M163/99/10]
gi|261739663|gb|EEY27589.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
513]
gi|262764262|gb|EEZ10294.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
str. Ether]
gi|263000178|gb|EEZ12868.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
str. Rev.1]
gi|263092702|gb|EEZ16911.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
63/9]
gi|264659174|gb|EEZ29435.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
M292/94/1]
gi|294818828|gb|EFG35828.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
gi|297173825|gb|EFH33189.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
B3196]
gi|326410333|gb|ADZ67397.1| flagellar basal body rod protein FlgC [Brucella melitensis M28]
gi|326553625|gb|ADZ88264.1| flagellar basal body rod protein FlgC [Brucella melitensis M5-90]
Length = 140
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA T YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|268316362|ref|YP_003290081.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
gi|262333896|gb|ACY47693.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
Length = 112
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+P Q+ + R K ++ NIAN TP Y+ + SFE L Q AR
Sbjct: 1 MEPSKL-QLLRHAMQAYTWRLKALAANIANLDTPGYQRVGV-SFEEALQQ----ARHQIP 54
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
L++ + + +EL + + +L T+ +++
Sbjct: 55 GLRQPEEVEPRMRMENTPP---------------VLEDELMELADTQMRTQLTTRALREH 99
Query: 121 NSMVMHVVRG 130
++ + G
Sbjct: 100 FDLMRTAITG 109
>gi|153951648|ref|YP_001398444.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939094|gb|ABS43835.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
doylei 269.97]
Length = 143
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE-THLKESDSSGLHWNAH 75
+ R ++++ N+AN TP Y+A+DI ++N+ + + ++ L+ + + H
Sbjct: 18 RNLRNQLINANLANVDTPFYKARDIEFETALVNRANEIFKKNDNKELQLAVTEEGHQKPW 77
Query: 76 VIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
P T + NTV + E + + ++++ +++ ++
Sbjct: 78 KFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITALDGVLRRQSNIFSSIL 136
>gi|86151611|ref|ZP_01069825.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153541|ref|ZP_01071745.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|121613256|ref|YP_001000228.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|157414809|ref|YP_001482065.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 81116]
gi|167005183|ref|ZP_02270941.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|315124051|ref|YP_004066055.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841240|gb|EAQ58488.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843267|gb|EAQ60478.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87250467|gb|EAQ73425.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|157385773|gb|ABV52088.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 81116]
gi|307747447|gb|ADN90717.1| Flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni M1]
gi|315017773|gb|ADT65866.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315931722|gb|EFV10677.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 327]
Length = 143
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE- 59
+ P ++ + + R ++++ N+AN TP Y+A+DI ++N+ + + ++
Sbjct: 2 INPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEIFKKNDN 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYELN 113
L+ + + H P T + NTV + E + +
Sbjct: 62 KELQLAVTEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITAL 121
Query: 114 TKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 122 DGVLRRQSNIFSSIL 136
>gi|254731831|ref|ZP_05190409.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 4 str.
292]
gi|260759600|ref|ZP_05871948.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
292]
gi|260669918|gb|EEX56858.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
292]
Length = 140
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA T YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSTQSTRLRIVSENIANAQSTARTADTDPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
Length = 130
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ + + R VSENI+NA TP YR K + SF+ + ++ + + S
Sbjct: 8 LSVTASGLRAQAARLTHVSENISNADTPGYRRKTV-SFQAV--RDLETDVSQVKVGRVSL 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI---KKLNSM 123
+ PL TG G+ V + E+ + + YE N K+ ++++S
Sbjct: 65 DRSELEQVYDPSHPLADETG-HYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQMSSS 123
Query: 124 VMHVVR 129
+M ++R
Sbjct: 124 LMDLLR 129
>gi|313634360|gb|EFS00957.1| flagellar basal-body rod protein FlgB [Listeria seeligeri FSL
N1-067]
Length = 133
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------------LMARTHETH 61
N+L ++VS NIANA+T N++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASE-TSFEESLGSSLRPSGQNNETTTGSLTKTNSKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L ++ + ++ + GN V +T+E+ +Y L + N
Sbjct: 71 LTGTEIDQTNAKV------TNKGGSINEDGNNVNVTSEMISLTKNNQMYALAISAL-NYN 123
Query: 122 SMVMHVVRG 130
S + RG
Sbjct: 124 SSINTAARG 132
>gi|86149083|ref|ZP_01067315.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596882|ref|ZP_01100118.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218562180|ref|YP_002343959.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|85840441|gb|EAQ57698.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190571|gb|EAQ94544.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359886|emb|CAL34674.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|315927026|gb|EFV06381.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315928560|gb|EFV07857.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 305]
Length = 143
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE- 59
+ P ++ + + R ++++ N+AN TP Y+A+DI ++N+ + + ++
Sbjct: 2 INPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEIFKKNDN 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYELN 113
L+ + + H P T + NTV + E + +
Sbjct: 62 KELQLAVTEEEHQKPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITAL 121
Query: 114 TKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 122 DGVLRRQSNIFSSIL 136
>gi|257457890|ref|ZP_05623049.1| flagellar basal-body rod protein FlgB [Treponema vincentii ATCC
35580]
gi|257444603|gb|EEV19687.1| flagellar basal-body rod protein FlgB [Treponema vincentii ATCC
35580]
Length = 139
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ + + + R + + N+A++ P+++ + +FET L + + + +
Sbjct: 11 DLLHRALDVNALRYTVSANNLASSEIPDFK-RTSINFETELKHALDSEKRAAGQFQLAVT 69
Query: 68 SGLHWNAHVI--------EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + + LD TT + +GN V E I+ Y+L +++
Sbjct: 70 DPRHIKSDGVIDYRSVSPRRVLDYTTTAKANGNNVDAEEEAMTILKIQMQYQLLSQMTGF 129
Query: 120 LNSMVMHVVR 129
S V V++
Sbjct: 130 QYSQVQSVLK 139
>gi|23499914|ref|NP_699354.1| flagellar basal body rod protein FlgC [Brucella suis 1330]
gi|23463491|gb|AAN33359.1| flagellar basal-body rod protein FlgC [Brucella suis 1330]
Length = 140
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R IVSENIANA T YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLCIVSENIANAQSTAKTADTDPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|116694217|ref|YP_728428.1| flagellar basal body rod protein [Ralstonia eutropha H16]
gi|113528716|emb|CAJ95063.1| flagellar basal body rod protein [Ralstonia eutropha H16]
Length = 135
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS---TPN---YRAKDISSFETILNQNFLM 54
M + F +A S+R + + N+ANA +P+ YRAK + +
Sbjct: 1 MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDI 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S + Q V + N V E+ Y+ N
Sbjct: 61 GGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPV---EEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ +M++ +
Sbjct: 118 EVLNTAKNMMLKTLT 132
>gi|161620234|ref|YP_001594120.1| flagellar basal body rod protein FlgC [Brucella canis ATCC 23365]
gi|254702574|ref|ZP_05164402.1| flagellar basal body rod protein FlgC [Brucella suis bv. 3 str.
686]
gi|260568518|ref|ZP_05838987.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
gi|261753154|ref|ZP_05996863.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
686]
gi|161337045|gb|ABX63349.1| flagellar basal-body rod protein FlgC [Brucella canis ATCC 23365]
gi|260155183|gb|EEW90264.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
gi|261742907|gb|EEY30833.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
686]
Length = 140
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R IVSENIANA T YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLCIVSENIANAQSTARTADTDPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|283954184|ref|ZP_06371709.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 414]
gi|283794463|gb|EFC33207.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 414]
Length = 143
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 54/135 (40%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE- 59
+ P ++ + + R ++++ N+AN TP Y+A+DI ++N+ + + ++
Sbjct: 2 INPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEIFKKNDN 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYELN 113
L+ + + H P T + NTV + E + +
Sbjct: 62 KELQLAVTEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITAL 121
Query: 114 TKLIKKLNSMVMHVV 128
++++ ++ ++
Sbjct: 122 DGVLRRQTNIFSSIL 136
>gi|255523707|ref|ZP_05390673.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
gi|296186711|ref|ZP_06855113.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
gi|255512576|gb|EET88850.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
gi|296048748|gb|EFG88180.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans
P7]
Length = 133
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 4/125 (3%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+ + + + +ER K ++NIAN +T Y+ K ++ FE L N T K
Sbjct: 12 VYNLIKKGLDASTERSKATADNIANINTKGYKRKYVT-FEETLQSNMDDLDLKTTDDKHI 70
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
L N I D +T + GN V I NE +Y +
Sbjct: 71 ---KLQENYGQINTKTDNSTSMNEDGNNVDIENEKTNQAANTLMYMALLNQANSRLTSEK 127
Query: 126 HVVRG 130
+V+ G
Sbjct: 128 YVISG 132
>gi|15887900|ref|NP_353581.1| flagellar basal body rod protein FlgC [Agrobacterium tumefaciens
str. C58]
gi|20141427|sp|Q44336|FLGC_AGRT5 RecName: Full=Flagellar basal-body rod protein flgC
gi|15155492|gb|AAK86366.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
C58]
Length = 139
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITFF-QIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K ++ F + L+
Sbjct: 1 MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVT-FGSELDHVS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ R L +H A + V + E+ Y+
Sbjct: 60 GVERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPN---VNVLIEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N ++I++ +V +
Sbjct: 117 NLQVIRQTRDLVASTI 132
>gi|283955950|ref|ZP_06373440.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792610|gb|EFC31389.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp.
jejuni 1336]
Length = 143
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE- 59
+ P ++ + + R ++++ N+AN TP Y+A+DI ++N+ + + ++
Sbjct: 2 INPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEIFKKNDN 61
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTG------VQVSGNTVGITNELYKSGHIKYLYELN 113
L+ + + H P T + NTV + E + +
Sbjct: 62 KELQLAITEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTVDLDVETTEMSKNTVMITAL 121
Query: 114 TKLIKKLNSMVMHVV 128
++++ +++ ++
Sbjct: 122 DGVLRRQSNIFSSIL 136
>gi|86356310|ref|YP_468202.1| flagellar basal body rod protein FlgC [Rhizobium etli CFN 42]
gi|86280412|gb|ABC89475.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
Length = 138
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F +++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRTS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + + D D V++ V I E+ Y+
Sbjct: 60 GVETVNVKKV-GVDEGDFSTEFDPSNPAADAKGVVKLP--NVNILVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + I++ ++ +
Sbjct: 117 NLQTIRQTRDLISSTI 132
>gi|90422608|ref|YP_530978.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
BisB18]
gi|90104622|gb|ABD86659.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
BisB18]
Length = 139
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANAST----PNYRA--KDISSFETILNQNFLMARTHETH 61
QIAS S R ++VSEN+ANA++ P + ++F +++ +
Sbjct: 10 QIASSGLEAQSTRLRVVSENLANANSTGRSPGAEPYQRKTTTFTAEMDRAAGVPVVKVKD 69
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ D + + DQ+ V++ V + E+ YE N ++IK+
Sbjct: 70 I-GVDRAPFRLDYQPGHPAADQSGYVKLP--NVNMLIEMADMRETNRTYEANLQVIKQTR 126
Query: 122 SMVMHVV 128
SMV +
Sbjct: 127 SMVSMTI 133
>gi|114706769|ref|ZP_01439669.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
gi|114537717|gb|EAU40841.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
Length = 138
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 11/132 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFLMAR 56
++ +IA+ S R ++VSEN+ANA TP Y K ++ F L++
Sbjct: 6 VSSLKIAASGMEAQSTRLRVVSENVANAETTGDTPGADPYVRKTVT-FGATLDEVTGANL 64
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T + + A + + + V + E+ YE N ++
Sbjct: 65 VRVTDIGTDKADFESTYDPGNPAADENGYVKRPN---VNMLTEMMDMREANRSYEANIQV 121
Query: 117 IKKLNSMVMHVV 128
IK+ ++ +
Sbjct: 122 IKQAREIINMTI 133
>gi|190890361|ref|YP_001976903.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
gi|190695640|gb|ACE89725.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
Length = 138
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F +++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRAS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + + D D V++ V + E+ Y+
Sbjct: 60 GVETVNVKKV-GVDEGDFSTEFDPSNPAADAKGVVKLP--NVNVLVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQTRDLISSTI 132
>gi|239834444|ref|ZP_04682772.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
3301]
gi|239822507|gb|EEQ94076.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
3301]
Length = 140
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLRIVSENIANAQSTAKTADADPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D+ V+ V + E+ YE N +++
Sbjct: 67 RIAEV-GKDTSPFIEQYEPSHPAADERGYVRYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
K+ ++ +
Sbjct: 124 KQARELISMTI 134
>gi|209964219|ref|YP_002297134.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
gi|209957685|gb|ACI98321.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
Length = 136
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + +++ R ++++EN+ANA+ TP YR + + F+ +LN+
Sbjct: 1 MDLMNTLSLSAAGLKVQGTRLRVIAENLANANSTAPTPGDLPYR-RKVVLFQNVLNRELG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
M + S + + + + N++ E + YE N
Sbjct: 60 MPTVKVKKIDVDRSDFQRRYDPGHPSADAEGYVLTPNVNSLV---ESMDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 117 LNVIDTTRQMLTRTI 131
>gi|153011526|ref|YP_001372740.1| flagellar basal body rod protein FlgC [Ochrobactrum anthropi ATCC
49188]
gi|151563414|gb|ABS16911.1| flagellar basal-body rod protein FlgC [Ochrobactrum anthropi ATCC
49188]
Length = 140
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLRIVSENIANAQSTAETADADPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D+ V+ V + E+ YE N +++
Sbjct: 67 RIAEV-GKDTSPFIEQYEPSHPAADERGYVRYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
K+ ++ +
Sbjct: 124 KQARELISMTI 134
>gi|51246506|ref|YP_066390.1| flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila
LSv54]
gi|50877543|emb|CAG37383.1| probable flagellar basal body rod protein (FlgC) [Desulfotalea
psychrophila LSv54]
Length = 143
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 44/140 (31%), Gaps = 13/140 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISS------FETIL 48
M + F+I+S S R +S NIANA T + Y+ K + F L
Sbjct: 1 MDILNSFKISSSALKAQSIRLDTISSNIANAETTSTPEGGPYKKKSVYFQAKPLTFAEQL 60
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
N + T + + + P G V V E+
Sbjct: 61 NGSLNAKTTGVEVINIIEDKSEPRKVYDPSHPDAGKDGY-VDMPNVDTLKEMVDMMSATR 119
Query: 109 LYELNTKLIKKLNSMVMHVV 128
Y+ N I+ M + +
Sbjct: 120 SYQANVTAIQSAKRMALKAL 139
>gi|22126392|ref|NP_669815.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
gi|45441411|ref|NP_992950.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
Microtus str. 91001]
gi|51596009|ref|YP_070200.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
IP 32953]
gi|108807171|ref|YP_651087.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
gi|108812485|ref|YP_648252.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
gi|145598612|ref|YP_001162688.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
gi|149366253|ref|ZP_01888288.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
gi|153947032|ref|YP_001401292.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
IP 31758]
gi|162420507|ref|YP_001606471.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
gi|165926046|ref|ZP_02221878.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938792|ref|ZP_02227347.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010857|ref|ZP_02231755.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211044|ref|ZP_02237079.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401147|ref|ZP_02306650.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420240|ref|ZP_02311993.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425758|ref|ZP_02317511.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469718|ref|ZP_02334422.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
gi|170024649|ref|YP_001721154.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
YPIII]
gi|186895112|ref|YP_001872224.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
PB1/+]
gi|218928920|ref|YP_002346795.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
gi|229896240|ref|ZP_04511410.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
gi|229897175|ref|ZP_04512331.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229897901|ref|ZP_04513052.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902867|ref|ZP_04517984.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
gi|270486647|ref|ZP_06203721.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
gi|294504032|ref|YP_003568094.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|21959379|gb|AAM86066.1|AE013854_2 cell-proximal portion of basal-body rod protein [Yersinia pestis
KIM 10]
gi|45436272|gb|AAS61827.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Microtus str. 91001]
gi|51589291|emb|CAH20912.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
IP 32953]
gi|108776133|gb|ABG18652.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
gi|108779084|gb|ABG13142.1| flagellar basal-body rod protein FlgC [Yersinia pestis Antiqua]
gi|115347531|emb|CAL20440.1| flagellar basal-body rod protein FlgC [Yersinia pestis CO92]
gi|145210308|gb|ABP39715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides F]
gi|149292666|gb|EDM42740.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
gi|152958527|gb|ABS45988.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
IP 31758]
gi|162353322|gb|ABX87270.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
gi|165913406|gb|EDR32028.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922250|gb|EDR39427.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990201|gb|EDR42502.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166208224|gb|EDR52704.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166961935|gb|EDR57956.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049536|gb|EDR60944.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055157|gb|EDR64954.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751183|gb|ACA68701.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
YPIII]
gi|186698138|gb|ACC88767.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
PB1/+]
gi|229680314|gb|EEO76413.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
gi|229688942|gb|EEO81007.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693512|gb|EEO83561.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701163|gb|EEO89192.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
gi|262361782|gb|ACY58503.1| flagellar basal body rod protein [Yersinia pestis D106004]
gi|262366082|gb|ACY62639.1| flagellar basal body rod protein [Yersinia pestis D182038]
gi|270335151|gb|EFA45928.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
gi|294354491|gb|ADE64832.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|320015469|gb|ADV99040.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 134
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + S + + V +T E+ + Y+ N
Sbjct: 60 GGVRVAQIVDDPSPDRLVYQPGNPLADAKGYVRMPN---VDVTGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|188579865|ref|YP_001923310.1| flagellar basal body rod protein FlgC [Methylobacterium populi
BJ001]
gi|179343363|gb|ACB78775.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
BJ001]
Length = 138
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYR------AKDISSFETILNQNFLMART 57
++ ++AS S R ++VSEN+ANA + A+ +F L++ +A
Sbjct: 6 LSASRLASAGLEAQSLRMRVVSENLANAQSTGASPGADPYARKTVTFRAELDRAAGIASV 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ +D + D+ V++ V + E+ YE N ++I
Sbjct: 66 RLREI-GTDDAPFRTEHDPANPAADENGNVKLP--NVNMLVEMADMREANRSYEANLQVI 122
Query: 118 KKLNSMVMHVV 128
K+ +MV V+
Sbjct: 123 KQARAMVASVI 133
>gi|37525839|ref|NP_929183.1| flagellar basal body rod protein FlgC [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36785268|emb|CAE14209.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
protein) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 134
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IA + S+R + + N+ANA + P+ YRAK + F
Sbjct: 1 MSLLSIFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVV-FRVAAPAGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + D + D+ V++ V + E+ + Y+ N
Sbjct: 60 GGVRVSEIVD-DPTPFRLEYQPGHPLADEKGYVRMP--NVDVVGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM++ +
Sbjct: 117 EVLNTTKSMMLKTLT 131
>gi|27380924|ref|NP_772453.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
USDA 110]
gi|27354090|dbj|BAC51078.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
110]
Length = 141
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 9/126 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLMARTHETHL 62
IA+ + R +++SENIANA + + A + + +F + L++ +
Sbjct: 14 IATSGLRAQAGRMRVISENIANADSTSQTAGGDPYRRKVPTFSSALDRTLDAQVVTLGRI 73
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
K S+ A + N+V E+ + YE N +I
Sbjct: 74 KPDQSNFRTKYEPNNPAADATGNVKYPNVNSVV---EMTDMRDAQRSYEANLNIISATRR 130
Query: 123 MVMHVV 128
M+ +
Sbjct: 131 MIQRTL 136
>gi|289208112|ref|YP_003460178.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
gi|288943743|gb|ADC71442.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
Length = 139
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST----PN--YRAKDISSFETILNQNFLMARTH 58
F ++ S R V+ N+ANA+T P+ YRAK + F+T++NQ ++
Sbjct: 6 NLFNTSASALTAQSVRLNTVASNLANANTVATNPDEAYRAKQVL-FQTVMNQADPNGASN 64
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ D S H + + + E+ YE N ++++
Sbjct: 65 GVRVAGIDESQAPPQPHYEPNHPQANEDGYIFRPAISVVEEMANMMSASRNYEANVEVME 124
Query: 119 KLNSMVMHVVR 129
++ ++
Sbjct: 125 TSRQLLQRTLQ 135
>gi|309788140|ref|ZP_07682746.1| flagellar basal-body rod protein flgB [Shigella dysenteriae 1617]
gi|308923992|gb|EFP69493.1| flagellar basal-body rod protein flgB [Shigella dysenteriae 1617]
Length = 86
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHI 106
R + + +S H A + P + + GNTV + E +
Sbjct: 1 MQRGRDATSVVALMMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADN 60
Query: 107 KYLYELNTKLIKKLNSMVMHVVR 129
Y+++ + +M+V++
Sbjct: 61 SLQYQMSLSALSGQIKGMMNVLQ 83
>gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
Length = 130
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
I++ ++R + SENIANA TP YR + +SFE I+ Q +
Sbjct: 6 NSLAISASGMAAQTDRLRFTSENIANADTPGYR-RKTTSFEAIVEQGQSTGAVTTGPMVL 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM- 123
D + L D + Q G V + E+ + + YE N K+ + M
Sbjct: 65 -DKTELDRVFDPSHPMADASGYYQ--GTNVDLLIEIADAREAQRSYEANLKMFDQSRQMS 121
Query: 124 --VMHVVR 129
+M ++R
Sbjct: 122 SSLMELLR 129
>gi|149178732|ref|ZP_01857315.1| probable flagellar basal-body rod protein FlgB [Planctomyces maris
DSM 8797]
gi|148842430|gb|EDL56810.1| probable flagellar basal-body rod protein FlgB [Planctomyces maris
DSM 8797]
Length = 154
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 48/138 (34%), Gaps = 18/138 (13%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMAR-------THE 59
+ + A + RQ +++ NIAN TP+Y+ +D + F+ L +
Sbjct: 13 LLEKMAAFAERRQDVLAGNIANIDTPSYKMRDLPVQEFQQALRDAVQLKENLTDPVSQQT 72
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQ---------VSGNTVGITNELYKSGHIKYLY 110
+ + + A + E + N I +++ + +
Sbjct: 73 LAMPVTLEATKSVEAQLQELFPRSLFQAREATPQNLTFQDDNNRSIESQMTQMTKNSMMQ 132
Query: 111 ELNTKLIKKLNSMVMHVV 128
+ +++ + ++ V+
Sbjct: 133 QFAVEVMMAQMNQLLTVI 150
>gi|327193034|gb|EGE59946.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
Length = 138
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F ++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDHVS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + + D D V++ V + E+ Y+
Sbjct: 60 GVETVNVKKV-GVDEGDFSTEFDPSNPAADAKGVVKLP--NVNVLVEMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQTRDLISSTI 132
>gi|227112519|ref|ZP_03826175.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|227328336|ref|ZP_03832360.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 134
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVV-FEVNAAPGQST 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+++ E S Q + V E+ + Y+ N
Sbjct: 60 GGVRVSNVIEDPSPARLVYEPGNPLADGQGYVRMPN---VDPVAEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM++ +
Sbjct: 117 EVLNTTKSMMLKTLT 131
>gi|261821151|ref|YP_003259257.1| flagellar basal body rod protein FlgC [Pectobacterium wasabiae
WPP163]
gi|261605164|gb|ACX87650.1| flagellar basal-body rod protein FlgC [Pectobacterium wasabiae
WPP163]
Length = 134
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVV-FEVNAAPGQST 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ E S Q + V E+ + Y+ N
Sbjct: 60 GGVRVANVIEDPSPARLVYEPGNPLADGQGYVRMPN---VDPVAEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM+M +
Sbjct: 117 EVLNTTKSMMMKTLT 131
>gi|163744319|ref|ZP_02151679.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
gi|161381137|gb|EDQ05546.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
Length = 136
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 12/131 (9%)
Query: 1 MQPI-TFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNF 52
M P+ + +IA+ + R +++SEN+ANA TP +R K I SF ++++N
Sbjct: 1 MDPLQSIAKIAASGMTAQTARLRVISENVANADSTGTTPGADPFRRKTI-SFSELIDRNG 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + D S + D+T V + V E+ YE
Sbjct: 60 GGSLVEVDRIGR-DQSPFRRDYDPAHPAADETGYV--NRPNVDPIIEMANMREASRNYEA 116
Query: 113 NTKLIKKLNSM 123
N + + M
Sbjct: 117 NMNMFESGRRM 127
>gi|238793996|ref|ZP_04637614.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
29909]
gi|238726628|gb|EEQ18164.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
29909]
Length = 134
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVSQIVDDPAPDRLVYQPGNPLADAKGYVRMPN---VDVTGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|163850061|ref|YP_001638104.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
PA1]
gi|218528664|ref|YP_002419480.1| flagellar basal body rod protein FlgC [Methylobacterium
chloromethanicum CM4]
gi|240137195|ref|YP_002961664.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Methylobacterium extorquens AM1]
gi|254559207|ref|YP_003066302.1| cell-proximal portion of basal-body rod biosynthesis protein
[Methylobacterium extorquens DM4]
gi|163661666|gb|ABY29033.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
PA1]
gi|218520967|gb|ACK81552.1| flagellar basal-body rod protein FlgC [Methylobacterium
chloromethanicum CM4]
gi|240007161|gb|ACS38387.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Methylobacterium extorquens AM1]
gi|254266485|emb|CAX22249.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Methylobacterium extorquens DM4]
Length = 138
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 9/131 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS----TPNYR--AKDISSFETILNQNFLMART 57
++ ++AS S R ++VSEN+ANA TP A+ +F L++ +A
Sbjct: 6 LSASRLASAGLEAQSLRMRVVSENLANAQSTGATPGADPYARKTVTFRAELDRAAGVASV 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ ++ + A + V + E+ YE N ++I
Sbjct: 66 RLREIGTDNAPFRTEHDPANAAADANGNVKLPN---VNMLVEMADMREANRSYEANLQVI 122
Query: 118 KKLNSMVMHVV 128
K+ +MV V+
Sbjct: 123 KQARAMVASVI 133
>gi|90423029|ref|YP_531399.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
BisB18]
gi|90105043|gb|ABD87080.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
BisB18]
Length = 141
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M IA+ + R +++SENIANA TP YR + + +F + L++
Sbjct: 6 MDFSRSMGIATSGLRAQAARMRVISENIANAESTAQTPGGDPYR-RKVPTFTSALDRALD 64
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+K D+S D V+ V E+ + YE N
Sbjct: 65 ARVVTLGRVKP-DNSNFRVKYEPGNPAADAAGNVKYP--NVNPLVEMTDMRDAQRSYEAN 121
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 122 LNIISATRRMIQRTL 136
>gi|307945654|ref|ZP_07660990.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
gi|307771527|gb|EFO30752.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
Length = 136
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M I +A+ + R ++++ENIANA+ TP+ YR + + +F++ ++
Sbjct: 1 MDLIKSLFVAASGLKAQNGRMRVIAENIANANSTAKTPDGEPYRRR-VPTFQSHFSKELN 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ E S+ A +Q ++ + NT+ E + YE N
Sbjct: 60 AEVVELGKVAEDKSAFKERYQPGHPAANEQGYVLEPNVNTLI---ETADMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+I+ M+ +
Sbjct: 117 LNVIQSSRRMLQRTI 131
>gi|75675326|ref|YP_317747.1| flagellar basal body rod protein FlgC [Nitrobacter winogradskyi
Nb-255]
gi|74420196|gb|ABA04395.1| Flagellar basal-body rod protein FlgC [Nitrobacter winogradskyi
Nb-255]
Length = 141
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNFLMARTHET 60
IA+ + R +++SENIANA++ P YR + + +F + L++
Sbjct: 13 SIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYR-RKVPTFSSALDRALDAKVVTLG 71
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKL 116
++ S+ + A SGN V E+ + YE N +
Sbjct: 72 RVRPDTSTFRIKHEPGNPAA-------DTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNI 124
Query: 117 IKKLNSMVMHVV 128
I M+ +
Sbjct: 125 ISATRRMIQRTL 136
>gi|89068702|ref|ZP_01156088.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
gi|89045665|gb|EAR51727.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
Length = 136
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPI-TFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNF 52
M P+ + IA+ + +R +IV+EN+ANA TP YR K + SFE ++++
Sbjct: 1 MDPLKSITSIAASGMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTV-SFEEMIDRES 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
A + + + A + + N + E+ YE
Sbjct: 60 GAALVKVGEIGRDTTDFTLVHDPAHPAADENGFVKVPNVNAII---EMTNMREAARSYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + + +M ++
Sbjct: 117 NMNMYEAGRAMRQQIL 132
>gi|197122864|ref|YP_002134815.1| flagellar basal-body rod protein FlgB [Anaeromyxobacter sp. K]
gi|196172713|gb|ACG73686.1| flagellar basal-body rod protein FlgB [Anaeromyxobacter sp. K]
Length = 152
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 32/123 (26%), Gaps = 20/123 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE-----------TILNQNFLMA 55
+ + RQ ++ ++ANA+TP + D+ F +
Sbjct: 8 LSTLERALDVRLARQTVLGGDLANANTPGFTPVDL-DFRAAMAAAAAPGPDLPAAPPPRV 66
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQT--------TGVQVSGNTVGITNELYKSGHIK 107
+ + ++ + I P + GN V +
Sbjct: 67 AARRGDIPLTLAAAVAGAPQPIAGPAAPERFVAEVPGAAPGLDGNAVDLDRTTAAIAENA 126
Query: 108 YLY 110
Y
Sbjct: 127 IQY 129
>gi|220917655|ref|YP_002492959.1| flagellar basal-body rod protein FlgB [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955509|gb|ACL65893.1| flagellar basal-body rod protein FlgB [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 152
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 32/123 (26%), Gaps = 20/123 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE-----------TILNQNFLMA 55
+ + RQ ++ ++ANA+TP + D+ F +
Sbjct: 8 LSTLERALDVRLARQTVLGGDLANANTPGFTPVDL-DFRAAMAAAPAPGPDLPAAPPPRV 66
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQT--------TGVQVSGNTVGITNELYKSGHIK 107
+ + ++ + I P + GN V +
Sbjct: 67 AARRGDIPLTLAAAVAGAPQPIAGPAAPERFVAEVPGAAPGLDGNAVDLDRTTAAIAENA 126
Query: 108 YLY 110
Y
Sbjct: 127 IQY 129
>gi|170748109|ref|YP_001754369.1| flagellar basal body rod protein FlgC [Methylobacterium
radiotolerans JCM 2831]
gi|170654631|gb|ACB23686.1| flagellar basal-body rod protein FlgC [Methylobacterium
radiotolerans JCM 2831]
Length = 138
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 5/125 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+IA SER ++++ENIANA + A + + R T
Sbjct: 10 RIAGSGMEAQSERLRVIAENIANARSTGQTAGSDPYTRKTITFRTALDRASGTAAVAIRQ 69
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
G +E GN V + E+ YE N ++IK+ +M
Sbjct: 70 IGEDKAPFRVEYDPGNPAA-DADGNVKLPNVNMLIEMADMREANRSYEANLQMIKQTRAM 128
Query: 124 VMHVV 128
V ++
Sbjct: 129 VASII 133
>gi|1086559|gb|AAB68966.1| FlgC [Agrobacterium tumefaciens]
gi|2459712|gb|AAB71788.1| FlgC [Agrobacterium tumefaciens]
Length = 139
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITFF-QIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +++ S R +IVSENIANA TP YR K ++ F + L+
Sbjct: 1 MDPLSAASKMSGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVT-FGSELDHVS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ R L +H A + N V E+ Y+
Sbjct: 60 GVERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVVI---EMADMREANRSYDA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N ++I++ +V +
Sbjct: 117 NLQVIRQTRDLVASTI 132
>gi|255598723|ref|XP_002537068.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis]
gi|223517603|gb|EEF25317.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis]
Length = 96
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
N + +T+ H+ + SSG A + GNTV + E Y
Sbjct: 17 NGALQQTNAGHMNGTGSSGYVSGAS--DPLFRSVVQGSADGNTVDMDVERNAYVDNGIRY 74
Query: 111 ELNTKLIKKLNSMVMHVVRG 130
E + +I ++ + G
Sbjct: 75 EASLTMIGGQIKKMLSAING 94
>gi|253688974|ref|YP_003018164.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755552|gb|ACT13628.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 134
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVV-FEVNAAPGQST 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ E S Q + V E+ + Y+ N
Sbjct: 60 GGVRVANVIEDPSPARLVYEPGNPLADGQGYVRMPN---VDPVAEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM++ +
Sbjct: 117 EVLNTTKSMMLKTLT 131
>gi|158422260|ref|YP_001523552.1| flagellar basal body rod protein FlgC [Azorhizobium caulinodans ORS
571]
gi|158329149|dbj|BAF86634.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
Length = 140
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIAN----ASTPN---YRAKDISSFETILNQNFLMARTHET 60
QIA ++R ++VSEN+AN STP Y K I F+ L++ +
Sbjct: 10 QIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQ-FQAELDRTLGASNVKVK 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
L D + D++ V++ V + E+ YE N ++IK+
Sbjct: 69 SL-GVDQAPFLTEYDPGNPAADESGMVKLP--NVNMLTEMADMREANRSYEANLQMIKQT 125
Query: 121 NSMVMHVV 128
SMV V
Sbjct: 126 RSMVAMTV 133
>gi|238764390|ref|ZP_04625340.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
33638]
gi|238697416|gb|EEP90183.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
33638]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V IT E+ + Y+ N
Sbjct: 60 GGVRVAQVIDDPAPDRLVFQPGNPLADAKGYVRMPN---VDITGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|157961169|ref|YP_001501203.1| flagellar basal body rod protein FlgC [Shewanella pealeana ATCC
700345]
gi|157846169|gb|ABV86668.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
700345]
Length = 138
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFL- 53
M F +A + S R + NIANA + + YRA+ FE +++
Sbjct: 1 MSLFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARH-PIFEAEMSKAQQH 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ +K S L N T + V + E+ Y++N
Sbjct: 60 QSAAQSVAVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ + SM+ +R
Sbjct: 120 VQVTEAAKSMLQQTLR 135
>gi|156934442|ref|YP_001438358.1| flagellar basal body rod protein FlgC [Cronobacter sakazakii ATCC
BAA-894]
gi|156532696|gb|ABU77522.1| hypothetical protein ESA_02273 [Cronobacter sakazakii ATCC BAA-894]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + YRAK + F+
Sbjct: 1 MALLNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + ES + + + V + E+ S Y+ N
Sbjct: 60 GGVKVTDVVESQAPDKLVYEPGNPLADAKGYVRMPN---VDVVGEMVNSMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|306846280|ref|ZP_07478841.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
gi|306273275|gb|EFM55144.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
Length = 140
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +I+SENIANA YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLRIISENIANAQSTARTADADPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
Length = 130
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+++ ++R + VSENIANA TP YR K + SFE + M+ H
Sbjct: 8 LSVSASGLKAQAQRLRHVSENIANADTPGYRRKTV-SFEA---RAAGMSGVHHVETGRVR 63
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM--- 123
+ + V + E+ + + YE N K+ + M
Sbjct: 64 LDRSDLARVYEPSHPMADETGHFDSSNVQLVIEIADAREAQRSYEANLKMFDQARQMSSS 123
Query: 124 VMHVVR 129
+M ++R
Sbjct: 124 LMDLLR 129
>gi|167623359|ref|YP_001673653.1| flagellar basal body rod protein FlgC [Shewanella halifaxensis
HAW-EB4]
gi|167353381|gb|ABZ75994.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
HAW-EB4]
Length = 138
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + + YRA+ FE +++
Sbjct: 1 MSLFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARH-PIFEAEMSKAQQH 59
Query: 55 ARTHET-HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ +K S L N T + V + E+ Y++N
Sbjct: 60 QSASASVAVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ + SM+ +R
Sbjct: 120 VQVTEAAKSMLQQTLR 135
>gi|323490140|ref|ZP_08095360.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
MPA1U2]
gi|323396188|gb|EGA89014.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
MPA1U2]
Length = 151
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 45/149 (30%), Gaps = 23/149 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI-------SS 43
M T F I+S R +VS NIANA+T YR K + S
Sbjct: 1 MSLFTGFNISSSGLTANRLRMDVVSANIANANTNRAELVDGEWMPYRRKTVELSQSGTSP 60
Query: 44 FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNE 99
F L T T +K S + P G G + V E
Sbjct: 61 FSNQLQSAINRGNTAVTGVKASGIKEDQTPFTLRYDPEHPDAG--EDGYVRMSNVDPLQE 118
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ YE N + SM M +
Sbjct: 119 MVDLMSATRSYEANVTALNASKSMFMKAL 147
>gi|73539448|ref|YP_299815.1| flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
gi|72122785|gb|AAZ64971.1| Flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
Length = 135
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS---TPN---YRAKDISSFETILNQNFLM 54
M + F +A S+R + + N+ANA +P+ YR K + +
Sbjct: 1 MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRTKQVIFGMAPTPGQSDV 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S + + V + N V E+ Y+ N
Sbjct: 61 GGVQVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPNVNPV---EEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ +M++ +
Sbjct: 118 EVLNSAKNMMLKTLT 132
>gi|156973584|ref|YP_001444491.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
BAA-1116]
gi|156525178|gb|ABU70264.1| hypothetical protein VIBHAR_01287 [Vibrio harveyi ATCC BAA-1116]
Length = 137
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 5/134 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F L+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + S NA + V + E+ Y+ N +
Sbjct: 61 DTVPVKVMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNLQ 120
Query: 116 LIKKLNSMVMHVVR 129
+ M++ ++
Sbjct: 121 VADSSKQMLLRTLQ 134
>gi|260597443|ref|YP_003210014.1| flagellar basal body rod protein FlgC [Cronobacter turicensis
z3032]
gi|260216620|emb|CBA29913.1| Flagellar basal-body rod protein flgC [Cronobacter turicensis
z3032]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + YRAK + F+
Sbjct: 1 MALLNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVI-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + ES + + + V + E+ S Y+ N
Sbjct: 60 GGVKVTDVVESQAPDKLVYEPGNPLADAKGYVRMPN---VDVVGEMVNSMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|218516085|ref|ZP_03512925.1| flagellar basal body rod protein FlgC [Rhizobium etli 8C-3]
Length = 132
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFLMARTHET 60
+IA S R +IVSENIANA TP YR K I+ F +++ + +
Sbjct: 3 KIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDRASGVETVNVK 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D D V++ V + E+ Y+ N + IK+
Sbjct: 62 KV-GVDEGDFSTEFDPSNPAADAKGVVKLP--NVNVLVEMADMREANRSYDANLQTIKQT 118
Query: 121 NSMVMHVV 128
++ +
Sbjct: 119 RDLISSTI 126
>gi|50120637|ref|YP_049804.1| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum
SCRI1043]
gi|49611163|emb|CAG74609.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
SCRI1043]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVV-FEVNAAPGQST 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ E S Q + V E+ + Y+ N
Sbjct: 60 GGVRVANVIEDPSPARLVYEPGNPLADGQGYVRMPN---VDPVAEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM++ +
Sbjct: 117 EVLNTTKSMMLKTLT 131
>gi|159045788|ref|YP_001534582.1| flagellar basal body rod protein FlgC [Dinoroseobacter shibae DFL
12]
gi|157913548|gb|ABV94981.1| flagellar basal-body rod protein FlgC [Dinoroseobacter shibae DFL
12]
Length = 130
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++R +VS+NIAN TP Y+ K + F+ + + + DS+
Sbjct: 19 AQRLNVVSQNIANVDTPGYQRKQ-AEFQQMFDTFDGTDGVAVLRVSLDDSALKRIYDPSH 77
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
PL TG G+ V E+ + + YE N + M ++
Sbjct: 78 --PLADPTGYYE-GSNVSTMVEVADAREAQRSYEANLRSFDNARQMSRSLL 125
>gi|238751760|ref|ZP_04613248.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
gi|238710031|gb|EEQ02261.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVAQIVDDPAPDRLVFQPGNPLADAKGYVRMPN---VDVTGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|254463222|ref|ZP_05076638.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
HTCC2083]
gi|206679811|gb|EDZ44298.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
HTCC2083]
Length = 126
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S R + VSENIANA TP Y + I SF+ L+++ L +S ++ +H
Sbjct: 19 SARLRHVSENIANADTPGYH-RKIVSFD--LSRDTGQVTIGRLSLDQSQLREIYDPSH-- 73
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
PL G + V + E+ + + YE N K++ + M ++
Sbjct: 74 --PLADAKG-NYDSSNVDLIIEIADAREAQRSYEANLKMLDQTRQMSSSLI 121
>gi|92116946|ref|YP_576675.1| flagellar basal body rod protein FlgC [Nitrobacter hamburgensis
X14]
gi|91799840|gb|ABE62215.1| flagellar basal-body rod protein FlgC [Nitrobacter hamburgensis
X14]
Length = 141
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 19/132 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNFLMARTHET 60
IA+ + R +++SENIANA + P YR + + +F + L++
Sbjct: 13 SIATSGLRAQAGRMRVISENIANADSTAQVPGGDPYR-RKVPTFSSALDRALDAKVVSLG 71
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKL 116
+K S+ + A SGN V E+ + YE N +
Sbjct: 72 RVKPDMSTFRIKHEPSNPAA-------DASGNVKYPNVNSLVEMTDMRDAQRSYEANLNI 124
Query: 117 IKKLNSMVMHVV 128
I M+ +
Sbjct: 125 ISATRRMIQRTL 136
>gi|238785499|ref|ZP_04629482.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
43970]
gi|238799105|ref|ZP_04642561.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
43969]
gi|238713601|gb|EEQ05630.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
43970]
gi|238717052|gb|EEQ08912.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
43969]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVSQVVDDPAPDRLVFQPGNPLADAKGYVRMPN---VDVTGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|84502401|ref|ZP_01000537.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
gi|84389213|gb|EAQ02010.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
Length = 136
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 1 MQPI-TFFQIASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNF 52
M P+ + I++ ER K+VSEN+ANAS+ P YR K I+ FE +L+
Sbjct: 1 MDPLKSILTISASGMLAQGERLKVVSENVANASSTAMSPGEDPYRRKTIT-FEELLDSES 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
++ + + D S D+ ++VS V E+ YE
Sbjct: 60 GVSTVGVSSIDR-DDSDFSLRFEPSHPAADEQGFIKVS--NVSPIMEMANMREASRSYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N L + M V+
Sbjct: 117 NMNLFEAARRMRSQVI 132
>gi|270262403|ref|ZP_06190674.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
gi|270043087|gb|EFA16180.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
Length = 134
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFDISGSALSAQSQRMNVSASNMANADSVTGPDGEPYRAKQVV-FEVAAAAGQPT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + + V + +E+ + Y+ N
Sbjct: 60 GGVRVSQVVDDPAPERLVYQPGNPLADGKGYVRMPN---VDVVSEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM+M +
Sbjct: 117 EVLNTTKSMMMKTLT 131
>gi|170741834|ref|YP_001770489.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
gi|168196108|gb|ACA18055.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
Length = 138
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
++AS S R ++V+ENIANA + Y+ K I+ F + L++ A
Sbjct: 10 RLASAGMEVQSLRLRVVAENIANAQSTGVDPGSDPYQRKTIT-FRSELDRAAGAATVGVR 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D + D+ V+ V + E+ YE N ++IK+
Sbjct: 69 EI-GVDRAPFRVEHEPGNPAADENGDVKYP--NVNVLIEMTDMREANRSYEANLQMIKQA 125
Query: 121 NSMVMHVV 128
++V V+
Sbjct: 126 RALVASVI 133
>gi|123442786|ref|YP_001006763.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|332161320|ref|YP_004297897.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|2494525|sp|Q56894|FLGC_YEREN RecName: Full=Flagellar basal-body rod protein flgC
gi|793899|emb|CAA88193.1| flgC [Yersinia enterocolitica]
gi|122089747|emb|CAL12600.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|325665550|gb|ADZ42194.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860608|emb|CBX70905.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
W22703]
Length = 134
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVAQIIDDPAPDRLVFQPGNPLADAKGYVRMPN---VDVTGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|86750885|ref|YP_487381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
HaA2]
gi|86573913|gb|ABD08470.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
HaA2]
Length = 141
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNFLMARTHET 60
IA+ + R +++SENIANA + P YR + + +F + L+++ ART
Sbjct: 13 GIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYR-RKVPTFTSALDRSLD-ARTVAL 70
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D+S D V+ V E+ + YE N +I
Sbjct: 71 GRVKPDTSAFRLKYEPTNPAADAAGNVKYP--NVNSMIEMTDMRSAQRSYEANLNVISAT 128
Query: 121 NSMVMHVV 128
M+ +
Sbjct: 129 RRMIQRTL 136
>gi|227820856|ref|YP_002824826.1| flagellar basal body rod protein FlgC [Sinorhizobium fredii NGR234]
gi|227339855|gb|ACP24073.1| flagellar basal-body rod protein FlgC [Sinorhizobium fredii NGR234]
Length = 139
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 1 MQPIT-FFQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P+T ++++ S R +IVSENIANA P YR K I SF +++
Sbjct: 1 MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDVPGADPYRRKTI-SFAAEVDRAS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ L +D S D+ V++ V + E+ YE
Sbjct: 60 GASLVEVQRL-GTDDSDFSIEFDPGNPAADEKGMVKMP--NVNVLIEMADMREANRAYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + +K+ ++ +
Sbjct: 117 NLQTVKQSRDLISQTI 132
>gi|238755326|ref|ZP_04616669.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
gi|238706462|gb|EEP98836.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
gi|253317693|gb|ACT22782.1| flagellar basal body rod protein FlgC [Yersinia ruckeri]
Length = 134
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVV-FQVANQGAQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S + + V + E+ + Y+ N
Sbjct: 60 GGVRVAQIVEDTSPDRLVFQPGNPLADAKGYVRMPN---VDVVGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM++ +
Sbjct: 117 EVLNTTKSMMLKTLT 131
>gi|307310148|ref|ZP_07589798.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
gi|306909866|gb|EFN40360.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
gi|315060352|gb|ADT74679.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli W]
gi|320200970|gb|EFW75554.1| Flagellar basal-body rod protein FlgC [Escherichia coli EC4100B]
gi|323379087|gb|ADX51355.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
Length = 134
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES S + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQSPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|296102910|ref|YP_003613056.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057369|gb|ADF62107.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 134
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ES + + V + E+ S Y+ N
Sbjct: 60 GGVKVSDVVESQAPDKLVYEPGNPLADANGYVKMPN---VDVVGEMVNSMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|255030210|ref|ZP_05302161.1| flagellar basal body rod protein FlgB [Listeria monocytogenes LO28]
Length = 107
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSAESAGNLTKTNTKH 70
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
L +D + + + GN V +T+E+
Sbjct: 71 LAGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMI 104
>gi|254720612|ref|ZP_05182423.1| flagellar basal body rod protein FlgC [Brucella sp. 83/13]
gi|265985652|ref|ZP_06098387.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
gi|306838574|ref|ZP_07471411.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
gi|264664244|gb|EEZ34505.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
gi|306406360|gb|EFM62602.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
Length = 140
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-------STPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + S R +IVSENIANA YR K + SF T L Q A
Sbjct: 8 STLKIAASGLSAQSTRLRIVSENIANAQSTARTADADPYRRKTV-SFRTELEQGTGAAEV 66
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+S D V+ V + E+ YE N +++
Sbjct: 67 RVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP--NVNMVVEMADMREANRSYEANLQVV 123
Query: 118 KKLNSMVMHVV 128
++ ++ +
Sbjct: 124 RQARELISMTI 134
>gi|153834459|ref|ZP_01987126.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
gi|163802605|ref|ZP_02196497.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
gi|148869155|gb|EDL68187.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
gi|159173688|gb|EDP58507.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
Length = 137
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 5/134 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F L+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + S NA + V + E+ Y+ N +
Sbjct: 61 DTVPVKVMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120
Query: 116 LIKKLNSMVMHVVR 129
+ M++ ++
Sbjct: 121 VADSSKQMLLRTLQ 134
>gi|238788313|ref|ZP_04632107.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
33641]
gi|238723559|gb|EEQ15205.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
33641]
Length = 134
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVAQVVDDPAPDRLVFQPGNPLADAKGYVRMPN---VDVTGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|260466621|ref|ZP_05812809.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
WSM2075]
gi|259029627|gb|EEW30915.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
WSM2075]
Length = 138
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHE 59
++A+ SER ++VSEN+ANA TP YR K I SF + L++ +
Sbjct: 8 LKVAASGLGAQSERLRVVSENLANAQSTGTTPGSDPYRRKTI-SFVSELDRASGSSTVEV 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ S EA ++ + V + E+ YE N +++K+
Sbjct: 67 NSIDRDPSDFPVEFQPGNEAADEKGYVKMPN---VNVLIEMADMTEANRSYEANLQVVKQ 123
Query: 120 LNSMVMHVV 128
++ +
Sbjct: 124 ARDLISMTI 132
>gi|91225871|ref|ZP_01260840.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
gi|91189521|gb|EAS75797.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
Length = 137
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 5/134 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F L+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + S NA + V + E+ Y+ N +
Sbjct: 61 DTVPVKVMGIVESDKPLNAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120
Query: 116 LIKKLNSMVMHVVR 129
+ M++ ++
Sbjct: 121 VADSSKQMLLRTLQ 134
>gi|293409440|ref|ZP_06653016.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
gi|291469908|gb|EFF12392.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
Length = 134
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVGDVIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|39936948|ref|NP_949224.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
CGA009]
gi|192292776|ref|YP_001993381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
TIE-1]
gi|39650805|emb|CAE29328.1| flagellar basal-body rod protein flgC [Rhodopseudomonas palustris
CGA009]
gi|192286525|gb|ACF02906.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
TIE-1]
Length = 141
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNFLMARTHET 60
IA+ + R +++SEN+ANA + P YR + + +F + L++
Sbjct: 13 GIATSGLRAQAGRMRVISENVANADSTAQNPGGDPYR-RKVPTFTSALDRTLDARVVALG 71
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+K D+S D V+ V E+ + YE N +I
Sbjct: 72 RVKP-DTSAFRVKYEPTNPAADANGNVKYP--NVNPVIEMTDMRDAQRSYEANLNVISAT 128
Query: 121 NSMVMHVV 128
M+ +
Sbjct: 129 RRMIQRTL 136
>gi|295096227|emb|CBK85317.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 134
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + V + E+ S Y+ N
Sbjct: 60 GGVKVADVVESQAPDKLVYEPGNPLADASGYVKMPN---VDVVGEMVNSMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|294140182|ref|YP_003556160.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
gi|293326651|dbj|BAJ01382.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
Length = 138
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 14/139 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + + YRA+ FE + +
Sbjct: 1 MSLFNIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARH-PIFEAEMAKASYQ 59
Query: 55 ARTHET----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
++ + + ESD+ L + + + V + E+ Y
Sbjct: 60 QQSSPSVKVKGIVESDAPLLKEYSPNHPMADGDGFIYKPN---VNVMEEMANMISASRSY 116
Query: 111 ELNTKLIKKLNSMVMHVVR 129
++N ++ + SM+ +R
Sbjct: 117 QMNVQVAEAAKSMLQQTLR 135
>gi|261339374|ref|ZP_05967232.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
ATCC 35316]
gi|288318175|gb|EFC57113.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
ATCC 35316]
Length = 134
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNLANADSVAGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ES + + V + E+ S Y+ N
Sbjct: 60 GGVKVSDVVESQAPDKLVYEPGNPLADANGYVKMPN---VDVVGEMVNSMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|254780380|ref|YP_003064793.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040057|gb|ACT56853.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
asiaticus str. psy62]
Length = 134
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 14/127 (11%)
Query: 9 IASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFLMARTHETH 61
IA+ S R +I+SENIANA TP YR K I SFE +++ + + R +
Sbjct: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGV-RVKKIG 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +S H + V + E LY N + IK+ +
Sbjct: 68 VDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSH 122
Query: 122 SMVMHVV 128
M+ +
Sbjct: 123 DMMTTTL 129
>gi|253990129|ref|YP_003041485.1| flagellar basal body rod protein FlgC [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211639034|emb|CAR67648.1| flagellar basal-body rod protein flgc (putative proximal rod
protein) [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253781579|emb|CAQ84742.1| flagellar basal-body rod protein flgc (putative proximal rod
protein) [Photorhabdus asymbiotica]
Length = 134
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IA + S+R + + N+ANA + P+ YRAK + F
Sbjct: 1 MSLLSVFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVV-FRVAAPAGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + D + D+ V++ V + E+ + Y+ N
Sbjct: 60 GGVRVSEIVD-DPTPFRLEYQPGHPLADEKGYVRMP--NVDVVGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|27381986|ref|NP_773515.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
USDA 110]
gi|27355156|dbj|BAC52140.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
110]
Length = 138
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHETH 61
+AS S R +IVSEN+ANA++ Y+ K I+ F+ +++
Sbjct: 11 VASSGLEAQSTRMRIVSENLANATSTGRTAGADPYQRKTIT-FDAAMDRASGAQLAKVKE 69
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + A + V + E+ + YE N +++K++
Sbjct: 70 VGVDTTPYRVEYDPGHPAADKSGYVKLPN---VNMMIEMADMREVNRSYEANLQVVKQVR 126
Query: 122 SMVMHVV 128
SM+ +
Sbjct: 127 SMLGMTI 133
>gi|320354315|ref|YP_004195654.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
DSM 2032]
gi|320122817|gb|ADW18363.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
DSM 2032]
Length = 145
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 47/142 (33%), Gaps = 15/142 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS------SFETIL 48
M T F IA+ + R +S N+AN+ T + Y+ K + F+ L
Sbjct: 1 MDIFTTFDIAASGLKAQTMRLNTISANLANSETTSTPEGGPYKKKSVVFQTENLPFKQHL 60
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHI 106
N + L + V + P + G N V + E+
Sbjct: 61 NNSLLAQGQAQGVKVAKIIEDTSEPQRVYDPTHPDAKEDGYVEMPN-VNVLKEMVDMMST 119
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE NT IK M M +
Sbjct: 120 TRSYEANTTTIKSAKRMAMRAL 141
>gi|110632658|ref|YP_672866.1| flagellar basal body rod protein FlgC [Mesorhizobium sp. BNC1]
gi|110283642|gb|ABG61701.1| flagellar basal-body rod protein FlgC [Chelativorans sp. BNC1]
Length = 139
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNF 52
M P++ +IA SER ++VSEN+ANA + P YR K I SF L +
Sbjct: 1 MDPLSTAVKIAGSGLAAQSERMRVVSENLANAQSTSEVPGGDPYRRKTI-SFAAELGRGN 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
A + + + EA + + V + E+ YE
Sbjct: 60 GGAMVEVSAIARDPAEFPVEYMPGHEAADEFGYVKMPN---VNMLVEMADMREANRGYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N +++K+ ++ +
Sbjct: 117 NLQVVKQARELISMTI 132
>gi|293395581|ref|ZP_06639864.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
gi|291421900|gb|EFE95146.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
Length = 134
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVV-FEVAAAPGQPT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + E+ + Y+ N
Sbjct: 60 GGVRVASIVDDPAPERLVFQPGNPLADAKGYVRMPN---VDVVGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM+M +
Sbjct: 117 EVLNTTKSMMMKTLT 131
>gi|290474970|ref|YP_003467854.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
bovienii SS-2004]
gi|289174287|emb|CBJ81077.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus bovienii SS-2004]
Length = 134
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IAS + S+R + + N+ANA + P+ YRAK + F +
Sbjct: 1 MSLLSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVV-FRVAAPAGQEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + ++ + V + E+ + Y+ N
Sbjct: 60 GGVRVSEVVDDPTPFRLEYRPGNPLADEKGYVRMPN---VDVVGEMVNTISASRSYQANI 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSIMLKTLT 131
>gi|163760754|ref|ZP_02167834.1| probable flagellar basal body rod protein [Hoeflea phototrophica
DFL-43]
gi|162282076|gb|EDQ32367.1| probable flagellar basal body rod protein [Hoeflea phototrophica
DFL-43]
Length = 112
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 28/120 (23%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ A S+R ++ N+AN TP+Y K +
Sbjct: 4 SIINTAFSGMAAQSKRMDAIASNVANVDTPDYNRKTVE---------------------M 42
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
++G A EAP +G V + EL K YE N +++ M
Sbjct: 43 VTTAGGGVRAVPREAPAGSNSG-------VDLATELMDMAESKMAYEANLAVMETGMDMW 95
>gi|254502506|ref|ZP_05114657.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
gi|222438577|gb|EEE45256.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
Length = 136
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + I++ + R ++++ENIANA+ TP+ YR + I +F++ ++
Sbjct: 1 MDLMKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYR-RKIPTFQSEFDKQLG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + E S+ + A + +Q + V E + YE N
Sbjct: 60 ADKVELGRIVEDKSAFKSTHMPGHPAADENGYVLQPN---VSTLVESADMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+I+ M+ +
Sbjct: 117 LNVIETTRKMLQRTI 131
>gi|127512277|ref|YP_001093474.1| flagellar basal body rod protein FlgC [Shewanella loihica PV-4]
gi|126637572|gb|ABO23215.1| flagellar basal-body rod protein FlgC [Shewanella loihica PV-4]
Length = 139
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + + YRA+ FE L +
Sbjct: 1 MSLFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARH-PVFEAELAKASHQ 59
Query: 55 ARTHETHLKES--DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
T + +S + + PL G N V + E+ Y++
Sbjct: 60 QNTSQAVKVAGIVESDKPLQKEYSPDHPLADADGFIYKPN-VNVMEEMANMISASRSYQM 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N ++ SM+ +R
Sbjct: 119 NVQVADAAKSMLQQTLR 135
>gi|86146157|ref|ZP_01064483.1| flagellar basal body rod protein [Vibrio sp. MED222]
gi|218708802|ref|YP_002416423.1| flagellar basal body rod protein FlgC [Vibrio splendidus LGP32]
gi|85836104|gb|EAQ54236.1| flagellar basal body rod protein [Vibrio sp. MED222]
gi|218321821|emb|CAV17789.1| Polar flagellar FlgC [Vibrio splendidus LGP32]
Length = 137
Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 5/134 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F LNQ
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELNQARNSG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + S NA + V + E+ Y+ N +
Sbjct: 61 HTVPVKVLGIVESDKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120
Query: 116 LIKKLNSMVMHVVR 129
+ M++ ++
Sbjct: 121 VADSSKQMLLRTLQ 134
>gi|23016761|ref|ZP_00056514.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
magnetotacticum MS-1]
Length = 138
Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 1 MQPI-TFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNF 52
M P+ +IA S+R +++SEN+ANA TP Y+ K ++ F+ L++
Sbjct: 3 MDPLMNSSKIAKSGLKVQSQRLRVISENLANADSLAQTPEGLPYQRKTVT-FKNELDREM 61
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
++ ++ A + + V E+ + YE
Sbjct: 62 GTKLVKVDKVRPDNAEFQRRYDPKHPAADRDGYVLAPN---VNPLIEMMDMREAQRSYEA 118
Query: 113 NTKLIKKLNSMV 124
N ++I+ +M+
Sbjct: 119 NLQVIQTSRTMM 130
>gi|238028851|ref|YP_002913082.1| flagellar basal body rod protein FlgC [Burkholderia glumae BGR1]
gi|237878045|gb|ACR30378.1| Flagellar basal-body rod protein FlgC [Burkholderia glumae BGR1]
Length = 141
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 16/138 (11%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + P+ YRAK + FET Q ART
Sbjct: 5 MNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVV-FET---QPLGGART 60
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYLYE 111
+ + N V E+ Y+
Sbjct: 61 RSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQ 120
Query: 112 LNTKLIKKLNSMVMHVVR 129
N + + +++ +
Sbjct: 121 ANVETLNTAKQLMLKTLT 138
>gi|148256779|ref|YP_001241364.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. BTAi1]
gi|146408952|gb|ABQ37458.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
[Bradyrhizobium sp. BTAi1]
Length = 141
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 17/131 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLMARTHETH 61
IA+ + R +++SENIANA + +A + + +F + L++
Sbjct: 13 SIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFSSALDRALDAKVVTLGK 72
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLI 117
+ SS A SGN V E+ + YE N +I
Sbjct: 73 VVPDQSSFRVKYDPSNPAA-------DASGNVKYPNVNPLVEMTDMRDAQRSYEANLNII 125
Query: 118 KKLNSMVMHVV 128
M+ +
Sbjct: 126 GATRRMIQRTL 136
>gi|300722684|ref|YP_003711974.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
nematophila ATCC 19061]
gi|297629191|emb|CBJ89787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus nematophila ATCC 19061]
Length = 134
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IAS + S+R + + N+ANA + P+ YRAK + F +
Sbjct: 1 MSLLSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVV-FRVAAPAGQEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + D + D+ V++ V + E+ + Y+ N
Sbjct: 60 GGVRVSEVVD-DPTPFRLEYKPGNPLADEKGYVRMP--NVDVVGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSIMLKTLT 131
>gi|318605240|emb|CBY26738.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 134
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVV-FQVAAQPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVAQIIDDPAPDRLVFQPGNPLANAKGYVRMPN---VDVTGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|170682563|ref|YP_001744106.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
gi|170520281|gb|ACB18459.1| flagellar basal-body rod protein FlgC [Escherichia coli SMS-3-5]
Length = 134
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSLTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|15964413|ref|NP_384766.1| flagellar basal body rod protein FlgC [Sinorhizobium meliloti 1021]
gi|307311555|ref|ZP_07591196.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
BL225C]
gi|307318910|ref|ZP_07598341.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
gi|17380478|sp|Q52944|FLGC_RHIME RecName: Full=Flagellar basal-body rod protein flgC
gi|15073590|emb|CAC45232.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
gi|306895324|gb|EFN26079.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
gi|306899572|gb|EFN30201.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
BL225C]
Length = 139
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 1 MQPIT-FFQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P+T ++++ S R +IVSENIANA P +R K I SF +++
Sbjct: 1 MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTI-SFAAEVDRAS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ L +D S + D+ V++ V I E+ YE
Sbjct: 60 GASLVEVERL-GTDDSDFNIEFDPGNPAADEKGMVKLP--NVNILIEMADMREANRAYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQSRDLISQTI 132
>gi|86157823|ref|YP_464608.1| flagellar basal-body rod protein FlgB [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774334|gb|ABC81171.1| flagellar basal-body rod protein FlgB [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 152
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 20/123 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR---------- 56
+ + RQ ++ ++ANA+TP + D+ F +
Sbjct: 8 LSTLERALDVRLARQTVLGGDLANANTPGFTPLDL-DFRAAMAAAPAPGPDVPAAPPPRV 66
Query: 57 ---------THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
T + + A + GN V +
Sbjct: 67 AARRGDIPLTLAAAVAGAPQPIAGAAAPERFVAEVPGAAPGLDGNAVDLDRTTAAIAENA 126
Query: 108 YLY 110
Y
Sbjct: 127 IQY 129
>gi|15801191|ref|NP_287208.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
EDL933]
gi|15830706|ref|NP_309479.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
str. Sakai]
gi|16129037|ref|NP_415592.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|26247214|ref|NP_753254.1| flagellar basal body rod protein FlgC [Escherichia coli CFT073]
gi|74311636|ref|YP_310055.1| flagellar basal body rod protein FlgC [Shigella sonnei Ss046]
gi|82544460|ref|YP_408407.1| flagellar basal body rod protein FlgC [Shigella boydii Sb227]
gi|89107920|ref|AP_001700.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. W3110]
gi|91210226|ref|YP_540212.1| flagellar basal body rod protein FlgC [Escherichia coli UTI89]
gi|110641250|ref|YP_668980.1| flagellar basal body rod protein FlgC [Escherichia coli 536]
gi|117623260|ref|YP_852173.1| flagellar basal body rod protein FlgC [Escherichia coli APEC O1]
gi|157158527|ref|YP_001462308.1| flagellar basal body rod protein FlgC [Escherichia coli E24377A]
gi|157160601|ref|YP_001457919.1| flagellar basal body rod protein FlgC [Escherichia coli HS]
gi|168747150|ref|ZP_02772172.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4113]
gi|168758634|ref|ZP_02783641.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4401]
gi|168764486|ref|ZP_02789493.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4501]
gi|168767733|ref|ZP_02792740.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4486]
gi|168773919|ref|ZP_02798926.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4196]
gi|168783604|ref|ZP_02808611.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4076]
gi|168790009|ref|ZP_02815016.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC869]
gi|168802019|ref|ZP_02827026.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC508]
gi|170020530|ref|YP_001725484.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
gi|170080725|ref|YP_001730045.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|187733039|ref|YP_001880754.1| flagellar basal body rod protein FlgC [Shigella boydii CDC 3083-94]
gi|188493209|ref|ZP_03000479.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
gi|191168455|ref|ZP_03030243.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
gi|191172415|ref|ZP_03033956.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
gi|193064524|ref|ZP_03045604.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
gi|194428485|ref|ZP_03061025.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
gi|194437997|ref|ZP_03070090.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
gi|195935464|ref|ZP_03080846.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
str. EC4024]
gi|208806183|ref|ZP_03248520.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4206]
gi|208816163|ref|ZP_03257342.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4045]
gi|208822529|ref|ZP_03262848.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4042]
gi|209400948|ref|YP_002269920.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4115]
gi|209918328|ref|YP_002292412.1| flagellar basal body rod protein FlgC [Escherichia coli SE11]
gi|215486283|ref|YP_002328714.1| flagellar basal body rod protein FlgC [Escherichia coli O127:H6
str. E2348/69]
gi|217328457|ref|ZP_03444539.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. TW14588]
gi|218553653|ref|YP_002386566.1| flagellar basal body rod protein FlgC [Escherichia coli IAI1]
gi|218557956|ref|YP_002390869.1| flagellar basal body rod protein FlgC [Escherichia coli S88]
gi|218689027|ref|YP_002397239.1| flagellar basal body rod protein FlgC [Escherichia coli ED1a]
gi|218694608|ref|YP_002402275.1| flagellar basal body rod protein FlgC [Escherichia coli 55989]
gi|218700423|ref|YP_002408052.1| flagellar basal body rod protein FlgC [Escherichia coli IAI39]
gi|218704482|ref|YP_002412001.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
gi|227886568|ref|ZP_04004373.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
gi|237706940|ref|ZP_04537421.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
gi|238900328|ref|YP_002926124.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|253773902|ref|YP_003036733.1| flagellar basal body rod protein FlgC [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161180|ref|YP_003044288.1| flagellar basal body rod protein FlgC [Escherichia coli B str.
REL606]
gi|254792456|ref|YP_003077293.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
str. TW14359]
gi|256018669|ref|ZP_05432534.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
gi|256023228|ref|ZP_05437093.1| flagellar basal body rod protein FlgC [Escherichia sp. 4_1_40B]
gi|260843314|ref|YP_003221092.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O103:H2 str. 12009]
gi|260854557|ref|YP_003228448.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O26:H11 str. 11368]
gi|260867437|ref|YP_003233839.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O111:H- str. 11128]
gi|261227021|ref|ZP_05941302.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK2000]
gi|261256255|ref|ZP_05948788.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK966]
gi|291282094|ref|YP_003498912.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
str. CB9615]
gi|293404358|ref|ZP_06648352.1| flgC [Escherichia coli FVEC1412]
gi|293414369|ref|ZP_06657018.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
gi|293433364|ref|ZP_06661792.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
gi|298380138|ref|ZP_06989743.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
gi|300816776|ref|ZP_07096996.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
gi|300821145|ref|ZP_07101294.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
gi|300899593|ref|ZP_07117832.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
gi|300902465|ref|ZP_07120447.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
gi|300918676|ref|ZP_07135257.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
gi|300922600|ref|ZP_07138700.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
gi|300928374|ref|ZP_07143908.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
gi|300938639|ref|ZP_07153368.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
gi|300950169|ref|ZP_07164114.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
gi|300954386|ref|ZP_07166840.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
gi|300974378|ref|ZP_07172590.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
gi|300982623|ref|ZP_07176207.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
gi|301023261|ref|ZP_07187058.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
gi|301029711|ref|ZP_07192765.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
gi|301051142|ref|ZP_07197972.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
gi|301304987|ref|ZP_07211089.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
gi|301328556|ref|ZP_07221617.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
gi|301644986|ref|ZP_07244952.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
gi|306814077|ref|ZP_07448250.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
gi|307137709|ref|ZP_07497065.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
gi|309798068|ref|ZP_07692443.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
gi|312968852|ref|ZP_07783059.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
gi|312971211|ref|ZP_07785389.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
gi|331641618|ref|ZP_08342753.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
gi|331646332|ref|ZP_08347435.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
gi|331652127|ref|ZP_08353146.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
gi|331657136|ref|ZP_08358098.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
gi|331662480|ref|ZP_08363403.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
gi|331667474|ref|ZP_08368338.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
gi|331672594|ref|ZP_08373383.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
gi|331676865|ref|ZP_08377561.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
gi|331682576|ref|ZP_08383195.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
gi|332279738|ref|ZP_08392151.1| flagellar rod protein FlgC [Shigella sp. D9]
gi|78100011|sp|P0ABX4|FLGC_ECO57 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
Full=Putative proximal rod protein
gi|78100012|sp|P0ABX3|FLGC_ECOL6 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
Full=Putative proximal rod protein
gi|78100013|sp|P0ABX2|FLGC_ECOLI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
Full=Putative proximal rod protein
gi|12514612|gb|AAG55820.1|AE005317_9 flagellar biosynthesis, cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. EDL933]
gi|26107615|gb|AAN79814.1|AE016759_88 Flagellar basal-body rod protein flgC [Escherichia coli CFT073]
gi|1787314|gb|AAC74158.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|4062651|dbj|BAA35882.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K12 substr. W3110]
gi|13360916|dbj|BAB34875.1| flagellar rod protein FlgC [Escherichia coli O157:H7 str. Sakai]
gi|73855113|gb|AAZ87820.1| flagellar protein for cell-proximal portion of basal-body rod
[Shigella sonnei Ss046]
gi|81245871|gb|ABB66579.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
gi|91071800|gb|ABE06681.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Escherichia coli UTI89]
gi|110342842|gb|ABG69079.1| flagellar basal-body rod protein FlgC [Escherichia coli 536]
gi|115512384|gb|ABJ00459.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli APEC O1]
gi|157066281|gb|ABV05536.1| flagellar basal-body rod protein FlgC [Escherichia coli HS]
gi|157080557|gb|ABV20265.1| flagellar basal-body rod protein FlgC [Escherichia coli E24377A]
gi|169755458|gb|ACA78157.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
gi|169888560|gb|ACB02267.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|187430031|gb|ACD09305.1| flagellar basal-body rod protein FlgC [Shigella boydii CDC 3083-94]
gi|187770492|gb|EDU34336.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4196]
gi|188017999|gb|EDU56121.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4113]
gi|188488408|gb|EDU63511.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
gi|188999102|gb|EDU68088.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4076]
gi|189354569|gb|EDU72988.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4401]
gi|189363308|gb|EDU81727.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4486]
gi|189365512|gb|EDU83928.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4501]
gi|189370511|gb|EDU88927.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC869]
gi|189375937|gb|EDU94353.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC508]
gi|190901474|gb|EDV61235.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
gi|190907299|gb|EDV66897.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
gi|192927776|gb|EDV82390.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
gi|194413537|gb|EDX29819.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
gi|194422933|gb|EDX38927.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
gi|208725984|gb|EDZ75585.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4206]
gi|208732811|gb|EDZ81499.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4045]
gi|208738014|gb|EDZ85697.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4042]
gi|209162348|gb|ACI39781.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC4115]
gi|209773398|gb|ACI85011.1| flagellar rod protein FlgC [Escherichia coli]
gi|209773400|gb|ACI85012.1| flagellar rod protein FlgC [Escherichia coli]
gi|209773402|gb|ACI85013.1| flagellar rod protein FlgC [Escherichia coli]
gi|209773404|gb|ACI85014.1| flagellar rod protein FlgC [Escherichia coli]
gi|209773406|gb|ACI85015.1| flagellar rod protein FlgC [Escherichia coli]
gi|209911587|dbj|BAG76661.1| flagellar basal-body rod protein FlgC [Escherichia coli SE11]
gi|215264355|emb|CAS08712.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O127:H6 str. E2348/69]
gi|217318884|gb|EEC27310.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. TW14588]
gi|218351340|emb|CAU97046.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 55989]
gi|218360421|emb|CAQ97973.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI1]
gi|218364725|emb|CAR02415.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli S88]
gi|218370409|emb|CAR18216.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI39]
gi|218426591|emb|CAR07419.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli ED1a]
gi|218431579|emb|CAR12458.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli UMN026]
gi|222032827|emb|CAP75566.1| flagellar basal-body rod protein flgC [Escherichia coli LF82]
gi|226898150|gb|EEH84409.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
gi|227836772|gb|EEJ47238.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
gi|238861102|gb|ACR63100.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|242376878|emb|CAQ31595.1| flagellar basal-body rod protein FlgC, subunit of Flagellar Motor
Complex and Flagellum [Escherichia coli BL21(DE3)]
gi|253324946|gb|ACT29548.1| flagellar basal-body rod protein FlgC [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973081|gb|ACT38752.1| flagellar basal-body rod protein C [Escherichia coli B str. REL606]
gi|253977295|gb|ACT42965.1| flagellar basal-body rod protein C [Escherichia coli BL21(DE3)]
gi|254591856|gb|ACT71217.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. TW14359]
gi|257753206|dbj|BAI24708.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O26:H11 str. 11368]
gi|257758461|dbj|BAI29958.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O103:H2 str. 12009]
gi|257763793|dbj|BAI35288.1| flagellar component FlgC of cell-proximal portion of basal-body rod
[Escherichia coli O111:H- str. 11128]
gi|260449786|gb|ACX40208.1| flagellar basal-body rod protein FlgC [Escherichia coli DH1]
gi|281178183|dbj|BAI54513.1| flagellar basal-body rod protein FlgC [Escherichia coli SE15]
gi|284920897|emb|CBG33960.1| flagellar basal-body rod protein FlgC [Escherichia coli 042]
gi|290761967|gb|ADD55928.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
str. CB9615]
gi|291324183|gb|EFE63605.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
gi|291428944|gb|EFF01969.1| flgC [Escherichia coli FVEC1412]
gi|291434427|gb|EFF07400.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
gi|294493232|gb|ADE91988.1| flagellar basal-body rod protein FlgC [Escherichia coli IHE3034]
gi|298279836|gb|EFI21344.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
gi|299877399|gb|EFI85610.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
gi|300297163|gb|EFJ53548.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
gi|300307088|gb|EFJ61608.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
gi|300318622|gb|EFJ68406.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
gi|300356864|gb|EFJ72734.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
gi|300397106|gb|EFJ80644.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
gi|300405497|gb|EFJ89035.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
gi|300410621|gb|EFJ94159.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
gi|300414170|gb|EFJ97480.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
gi|300421077|gb|EFK04388.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
gi|300450516|gb|EFK14136.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
gi|300456424|gb|EFK19917.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
gi|300463632|gb|EFK27125.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
gi|300526444|gb|EFK47513.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
gi|300530550|gb|EFK51612.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
gi|300839705|gb|EFK67465.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
gi|300844948|gb|EFK72708.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
gi|301076715|gb|EFK91521.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
gi|305852714|gb|EFM53162.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
gi|307553076|gb|ADN45851.1| flagellar basal-body rod protein FlgC [Escherichia coli ABU 83972]
gi|307627456|gb|ADN71760.1| flagellar basal body rod protein FlgC [Escherichia coli UM146]
gi|308118351|gb|EFO55613.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
gi|309701346|emb|CBJ00647.1| flagellar basal-body rod protein FlgC [Escherichia coli ETEC
H10407]
gi|310336413|gb|EFQ01599.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
gi|312286254|gb|EFR14167.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
gi|312945636|gb|ADR26463.1| flagellar basal body rod protein FlgC [Escherichia coli O83:H1 str.
NRG 857C]
gi|315135706|dbj|BAJ42865.1| cell-proximal portion of basal-body rod [Escherichia coli DH1]
gi|315253875|gb|EFU33843.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 85-1]
gi|315287371|gb|EFU46782.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 110-3]
gi|315291068|gb|EFU50431.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 153-1]
gi|315296705|gb|EFU56000.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 16-3]
gi|315618244|gb|EFU98834.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
gi|320179226|gb|EFW54184.1| Flagellar basal-body rod protein FlgC [Shigella boydii ATCC 9905]
gi|320186979|gb|EFW61692.1| Flagellar basal-body rod protein FlgC [Shigella flexneri CDC
796-83]
gi|320189757|gb|EFW64413.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. EC1212]
gi|320196444|gb|EFW71067.1| Flagellar basal-body rod protein FlgC [Escherichia coli WV_060327]
gi|320637525|gb|EFX07325.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
str. G5101]
gi|320643086|gb|EFX12287.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
str. 493-89]
gi|320648544|gb|EFX17199.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
str. H 2687]
gi|320653858|gb|EFX21932.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659338|gb|EFX26907.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664473|gb|EFX31624.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
str. LSU-61]
gi|323156881|gb|EFZ43015.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
gi|323163756|gb|EFZ49575.1| flagellar basal-body rod protein FlgC [Escherichia coli E128010]
gi|323174797|gb|EFZ60412.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
gi|323175695|gb|EFZ61289.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
gi|323185803|gb|EFZ71164.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
gi|323190586|gb|EFZ75858.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
gi|323937814|gb|EGB34078.1| flagellar basal-body rod protein FlgC [Escherichia coli E1520]
gi|323942543|gb|EGB38710.1| flagellar basal-body rod protein FlgC [Escherichia coli E482]
gi|323947624|gb|EGB43628.1| flagellar basal-body rod protein FlgC [Escherichia coli H120]
gi|323953240|gb|EGB49106.1| flagellar basal-body rod protein FlgC [Escherichia coli H252]
gi|323957898|gb|EGB53610.1| flagellar basal-body rod protein FlgC [Escherichia coli H263]
gi|323962673|gb|EGB58251.1| flagellar basal-body rod protein FlgC [Escherichia coli H489]
gi|323967015|gb|EGB62441.1| flagellar basal-body rod protein FlgC [Escherichia coli M863]
gi|323973337|gb|EGB68526.1| flagellar basal-body rod protein FlgC [Escherichia coli TA007]
gi|323976553|gb|EGB71641.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
gi|324007914|gb|EGB77133.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 57-2]
gi|324013348|gb|EGB82567.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 60-1]
gi|324017422|gb|EGB86641.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 117-3]
gi|324117355|gb|EGC11262.1| flagellar basal-body rod protein FlgC [Escherichia coli E1167]
gi|326339296|gb|EGD63110.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. 1125]
gi|326344743|gb|EGD68491.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
str. 1044]
gi|327253473|gb|EGE65111.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
gi|330910888|gb|EGH39398.1| flagellar basal-body rod protein FlgC [Escherichia coli AA86]
gi|331038416|gb|EGI10636.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
gi|331045084|gb|EGI17211.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
gi|331050405|gb|EGI22463.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
gi|331055384|gb|EGI27393.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
gi|331060902|gb|EGI32866.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
gi|331065059|gb|EGI36954.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
gi|331070237|gb|EGI41603.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
gi|331075554|gb|EGI46852.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
gi|331080207|gb|EGI51386.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
gi|332094031|gb|EGI99083.1| flagellar basal-body rod protein FlgC [Shigella boydii 3594-74]
gi|332102090|gb|EGJ05436.1| flagellar rod protein FlgC [Shigella sp. D9]
gi|332342620|gb|AEE55954.1| flagellar basal-body rod protein FlgC [Escherichia coli UMNK88]
Length = 134
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|28897550|ref|NP_797155.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
2210633]
gi|153839687|ref|ZP_01992354.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
AQ3810]
gi|260364609|ref|ZP_05777211.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
K5030]
gi|260878286|ref|ZP_05890641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
AN-5034]
gi|260898116|ref|ZP_05906612.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
Peru-466]
gi|260901951|ref|ZP_05910346.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
AQ4037]
gi|5361006|gb|AAD42913.1|U12817_7 polar flagellar FlgC homolog [Vibrio parahaemolyticus]
gi|28805762|dbj|BAC59039.1| polar flagellar FlgC [Vibrio parahaemolyticus RIMD 2210633]
gi|149746797|gb|EDM57785.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
AQ3810]
gi|308086105|gb|EFO35800.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
Peru-466]
gi|308090161|gb|EFO39856.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
AN-5034]
gi|308106781|gb|EFO44321.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
AQ4037]
gi|308115115|gb|EFO52655.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
K5030]
gi|328473455|gb|EGF44303.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
10329]
Length = 137
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 5/134 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F L+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + S +A + V + E+ Y+ N +
Sbjct: 61 DTVPVKVLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120
Query: 116 LIKKLNSMVMHVVR 129
+ M++ ++
Sbjct: 121 VADSSKQMLLRTLQ 134
>gi|168334477|ref|ZP_02692648.1| Flagellar basal body protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 120
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
I + + R + ++ NIAN T Y+ D+ F +IL + M L
Sbjct: 6 DITKKALDASMLRYQHLTNNIANIDTVGYKRTDVE-FGSILARELQMNGRKNIDLNRIQP 64
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ NA ++ GN + I E+ + Y +
Sbjct: 65 RVYYDNAGART---------RLDGNNIDIDKEMSQLSQETLRYNTLIQ 103
>gi|82777311|ref|YP_403660.1| flagellar basal body rod protein FlgC [Shigella dysenteriae Sd197]
gi|309788141|ref|ZP_07682747.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
gi|81241459|gb|ABB62169.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
Sd197]
gi|308923993|gb|EFP69494.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
Length = 134
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNSAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADIIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|23008564|ref|ZP_00049957.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
magnetotacticum MS-1]
Length = 118
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 20 RQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
R ++VSEN+ANA TP Y K ++ F+ L++ +A + +D +
Sbjct: 2 RMRVVSENLANAQSTGATPGADPYSRKTVT-FQAALDRAAGIASVRLREI-GTDKTPFRT 59
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
D+ V++ V + E+ YE N ++IK+ +MV V+
Sbjct: 60 EHDPANPAADENGNVKLP--NVNMLVEMADMREANRSYEANLQVIKQARAMVASVI 113
>gi|259907632|ref|YP_002647988.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
gi|224963254|emb|CAX54738.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
gi|283477474|emb|CAY73390.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
12163]
gi|310764862|gb|ADP09812.1| Flagellar basal-body rod protein, FlgC [Erwinia sp. Ejp617]
Length = 134
Score = 50.3 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ S+R + + N+ANA + P+ YRA+ ++ FE +
Sbjct: 1 MSLFSVFDISGSAMAAQSKRLNVSASNMANADSVVGPDGQPYRARQVT-FEVDAAAGNEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + Q + N V E+ + Y+ N
Sbjct: 60 GGVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVD---EMVNTLSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ +M++ +
Sbjct: 117 EVMNSAKAMMLKTL 130
>gi|255017933|ref|ZP_05290059.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
F2-515]
Length = 96
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL------------MARTHETH 61
N+L ++VS NIANA+TPN++A + +SFE L + + +T+ H
Sbjct: 1 MNYLQTANQVVSNNIANANTPNFKASE-ASFEESLGSSLRASGQNSTESAGNLTKTNTKH 59
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
L +D + + + GN V +T+E+
Sbjct: 60 LAGTDIDETNAKVTTK------SGSINEDGNNVNVTSEMI 93
>gi|150395483|ref|YP_001325950.1| flagellar basal body rod protein FlgC [Sinorhizobium medicae
WSM419]
gi|150026998|gb|ABR59115.1| flagellar basal-body rod protein FlgC [Sinorhizobium medicae
WSM419]
Length = 139
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 1 MQPIT-FFQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P+T ++++ S R +IVSENIANA P YR K I SF +++
Sbjct: 1 MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGTDPYRRKTI-SFAAEVDRAS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ L +D S + D+ V++ V I E+ YE
Sbjct: 60 GASLVEVERL-GTDDSDFNVEFDPGNPAADEKGMVKLP--NVNILIEMADMREANRAYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQARDLISQTI 132
>gi|146311244|ref|YP_001176318.1| flagellar basal body rod protein FlgC [Enterobacter sp. 638]
gi|145318120|gb|ABP60267.1| flagellar basal-body rod protein FlgC [Enterobacter sp. 638]
Length = 134
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNMANADSVTGPDGQPYRAKQVV-FQVDAAPGGAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ES + + V + E+ + Y+ N
Sbjct: 60 GGVKVSSVVESQAPDKLVFEPGNPLADANGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|320529387|ref|ZP_08030475.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
gi|320138353|gb|EFW30247.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
Length = 151
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 44/139 (31%), Gaps = 17/139 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTP------NYRAKDISS----------FETILNQN 51
A+ R ++S NIANA+T Y + + FE+ L +
Sbjct: 8 DAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQPREKGNGIGFESFLARA 67
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
R + S + V E D V V I +E+ Y
Sbjct: 68 SERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDMISASRGY 127
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E NT I SMV +R
Sbjct: 128 EANTTTINAAKSMVNAALR 146
>gi|323139652|ref|ZP_08074694.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
49242]
gi|322395084|gb|EFX97643.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
49242]
Length = 139
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 15/131 (11%)
Query: 7 FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQ--NFLMART 57
++A S R +IVSEN+ANA +TP Y K I SF L++ + R
Sbjct: 9 LKVAGAGLAAQSARLRIVSENMANAQSTGNTPGADPYVRKTI-SFANELDRASGVRLVRV 67
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
++ + + + H + V + E+ YE + +++
Sbjct: 68 NQIGVDPTPFTIEHDPGNPAADANGDVKRP-----NVNLLVEMGDMREANRAYEADLQVM 122
Query: 118 KKLNSMVMHVV 128
K+ ++ V
Sbjct: 123 KQSRDLIAMTV 133
>gi|219681697|ref|YP_002468083.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471393|ref|ZP_05635392.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|219624540|gb|ACL30695.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 136
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + F IA S++ +++ N+AN + Y+ + F + + +
Sbjct: 1 MSLLNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPY-IAKQVVFSLDTSKNS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG-----NTVGITNELYKSGHIKYLYELNTK 115
+ S + + ++ D + + + V E+ + Y+ N +
Sbjct: 60 KIGGVKISAIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIE 119
Query: 116 LIKKLNSMVMHVVR 129
++K SM+M +
Sbjct: 120 VLKTAKSMIMKTLT 133
>gi|13472574|ref|NP_104141.1| flagellar basal body rod protein FlgC [Mesorhizobium loti
MAFF303099]
gi|14023320|dbj|BAB49927.1| flagellar basal-body rod protein; FlgC [Mesorhizobium loti
MAFF303099]
Length = 138
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHE 59
++A+ SER ++VSEN+ANA TP YR K I SF + L++ +
Sbjct: 8 LKVAASGLGAQSERLRVVSENLANAQSTGTTPGADPYRRKTI-SFVSELDRASGASTVEV 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ S EA ++ + V + E+ YE N +++K+
Sbjct: 67 NSIDRDPSVFPVEFQPGNEAADEKGYVKMPN---VNVLIEMADMTEANRSYEANLQVVKQ 123
Query: 120 LNSMVMHVV 128
++ +
Sbjct: 124 ARDLISMTI 132
>gi|220925380|ref|YP_002500682.1| flagellar basal body rod protein FlgC [Methylobacterium nodulans
ORS 2060]
gi|219949987|gb|ACL60379.1| flagellar basal-body rod protein FlgC [Methylobacterium nodulans
ORS 2060]
Length = 136
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-PN------YRAKDISSFETILNQNFL 53
M + IA+ S R +++SENIANA + P YR + + +F L++
Sbjct: 1 MDFMKAIGIAASGLRAQSGRMRVISENIANADSEPKSAGAEPYR-RKVPTFANRLDRELD 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ ++ D S D V++ V + E + YE N
Sbjct: 60 ASVVELGRVRR-DQSPFRTKHEPGNPAADANGEVRLP--NVNLLVETVDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 117 LNMITAARRMISRTI 131
>gi|238758112|ref|ZP_04619292.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
gi|238703650|gb|EEP96187.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
Length = 134
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA + S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MSLLNIFDIAGSALSAQSQRLNVSASNMANAESVTGPDGQPYRAKQVV-FQVAAQAGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + + V +T E+ + Y+ N
Sbjct: 60 GGVRVSQIVDDPAPDRLVFQPGNPLADAKGYVRMPN---VDVTGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVLNTTKSLMLKTLT 131
>gi|157146228|ref|YP_001453547.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
BAA-895]
gi|157083433|gb|ABV13111.1| hypothetical protein CKO_01985 [Citrobacter koseri ATCC BAA-895]
Length = 134
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADANGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|292489135|ref|YP_003532022.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
gi|292900254|ref|YP_003539623.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291200102|emb|CBJ47228.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291554569|emb|CBA22184.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
gi|312173293|emb|CBX81548.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
BAA-2158]
Length = 134
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ S+R + + N+ANA + P+ YRA+ ++ FE +
Sbjct: 1 MSLFSVFDISGSAMAAQSKRLNVSASNMANADSAVGPDGQPYRARQVT-FEVDAAAGNEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + Q + N V E+ + Y+ N
Sbjct: 60 GGVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVD---EMVNTLSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ +M++ +
Sbjct: 117 EVMNSAKAMMLKTL 130
>gi|262394941|ref|YP_003286795.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
gi|262338535|gb|ACY52330.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
Length = 137
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 5/134 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F L+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + S +A + V + E+ Y+ N +
Sbjct: 61 DTVPVKVMGIVESDKPLSAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120
Query: 116 LIKKLNSMVMHVVR 129
+ M++ ++
Sbjct: 121 VADSSKQMLLRTLQ 134
>gi|146341894|ref|YP_001206942.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. ORS278]
gi|146194700|emb|CAL78725.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
[Bradyrhizobium sp. ORS278]
Length = 141
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 17/130 (13%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLMARTHETHL 62
IA+ + R +++SENIANA + +A + + +F + L++ +
Sbjct: 14 IATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFTSALDRALDAKVVTLGKV 73
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIK 118
SS A SGN V E+ + YE N +I
Sbjct: 74 VPDQSSFRVKYDPSNPAA-------DASGNVKYPNVNPLIEMTDMRDAQRSYEANLNIIG 126
Query: 119 KLNSMVMHVV 128
M+ +
Sbjct: 127 ATRRMIQRTL 136
>gi|15616944|ref|NP_240157.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219682252|ref|YP_002468636.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|11386805|sp|P57420|FLGC_BUCAI RecName: Full=Flagellar basal-body rod protein flgC
gi|25298910|pir||C84969 flagellar basal-body rod protein flgC [imported] - Buchnera sp.
(strain APS)
gi|10039009|dbj|BAB13043.1| flagellar basal-body rod protein flgC [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621985|gb|ACL30141.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|311086076|gb|ADP66158.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086647|gb|ADP66728.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087233|gb|ADP67313.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087752|gb|ADP67831.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 136
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + F IA S++ +++ N+AN + Y+ + F + +
Sbjct: 1 MSLLNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPY-IAKQVVFSLDTAKNS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG-----NTVGITNELYKSGHIKYLYELNTK 115
+ S + + ++ D + + + V E+ + Y+ N +
Sbjct: 60 KIGGVKISAIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIE 119
Query: 116 LIKKLNSMVMHVVR 129
++K SM+M +
Sbjct: 120 VLKTAKSMIMKTLT 133
>gi|157376218|ref|YP_001474818.1| flagellar basal body rod protein FlgC [Shewanella sediminis
HAW-EB3]
gi|157318592|gb|ABV37690.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
HAW-EB3]
Length = 138
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + YRA+ + +
Sbjct: 1 MSLFDIFNVAGSGMSAQSVRLNTTASNIANADAVSSSVDETYRARHPIFEAEMAKASHQQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S + V + E+ Y++N
Sbjct: 61 QSSQAVAVKGIVESDAPLQKEYSPDHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ + SM+ +R
Sbjct: 121 QVAEAAKSMLQQTLR 135
>gi|160903121|ref|YP_001568702.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
gi|160360765|gb|ABX32379.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
Length = 140
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHE 59
IA+ R ++S+N+AN+ T YR K + F+ L+++ R +
Sbjct: 8 VLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVI-FQEALSESTNGDR-NF 65
Query: 60 THLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+K S ++ P D VS V + E+ + YE+N ++
Sbjct: 66 GGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEMNAAVV 125
Query: 118 KKLNSMVMHVV 128
SM +
Sbjct: 126 NSAKSMYNSAL 136
>gi|212634346|ref|YP_002310871.1| flagellar basal body rod protein FlgC [Shewanella piezotolerans
WP3]
gi|212555830|gb|ACJ28284.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
WP3]
Length = 138
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFL- 53
M F +A + S R + NIANA + YRA+ FE +++
Sbjct: 1 MSLFNIFNVAGSGMSAQSVRLNTTASNIANADAVSSSAGETYRARH-PIFEAEMSKAQQH 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + +K S L N T + V + E+ Y++N
Sbjct: 60 QSASQSVAVKGIVESDLPLNKEFSPGHPMADTDGFIYKPNVNVMEEMANMISASRSYQMN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ SM+ +R
Sbjct: 120 VQVTDAAKSMLQQTLR 135
>gi|323703167|ref|ZP_08114820.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
DSM 574]
gi|323531826|gb|EGB21712.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
DSM 574]
Length = 145
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN---------YRAKDISSFETILNQN 51
M F I++ R +++ N+AN +T YR + + F L Q
Sbjct: 1 MGLFDSFAISASGMTSERLRLDLIANNVANMNTAGRPNDPNNPVYRRR-VPVFAEQLRQT 59
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIK 107
T + + A GN + I NE+
Sbjct: 60 MAANSTEPRGAGVRVKAIVEDPAPPRIVHEPDNPLADQDGNVAYPNINIVNEMVDMITAS 119
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 120 RAYEANVTALNAAKSMALKAL 140
>gi|218549198|ref|YP_002382989.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ATCC
35469]
gi|218356739|emb|CAQ89367.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ATCC 35469]
gi|324113869|gb|EGC07843.1| flagellar basal-body rod protein FlgC [Escherichia fergusonii B253]
gi|325497618|gb|EGC95477.1| flagellar basal body rod protein FlgC [Escherichia fergusonii
ECD227]
Length = 134
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKHVV-FQVDNAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + V + E+ + Y+ N
Sbjct: 60 GGVKVAGVVESQAPDKLVYEPGNPLADANGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|115523177|ref|YP_780088.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
BisA53]
gi|115517124|gb|ABJ05108.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
BisA53]
Length = 138
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
QIAS S R ++VSEN+ANA++ YR + ++F +++ +
Sbjct: 10 QIASSGLEVQSTRLRVVSENLANANSTGRAPGAEPYR-RKTTTFAAEMDRAQGVRVVKVK 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ + A + NT+ E+ YE N +++K+
Sbjct: 69 DVGVDRTPFRVEYEPSHPAADQDGYVKLPNVNTLI---EMADMRETNRSYEANLQVVKQA 125
Query: 121 NSMVMHVV 128
SMV +
Sbjct: 126 RSMVSMTI 133
>gi|327539963|gb|EGF26562.1| flagellar basal-body rod protein FlgB [Rhodopirellula baltica WH47]
Length = 186
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 51/176 (28%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNF---------- 52
T Q + R ++++ NIAN STP+YR++D+ F+T L ++
Sbjct: 8 TTIGALEQTLAFTERRHELLAGNIANLSTPDYRSRDLDQGQFQTALAESIRDRGKGPSPA 67
Query: 53 --------------------------------------LMARTHETHLKESDSSGLHWNA 74
M+ + L S ++
Sbjct: 68 PEIAQPDLSQGHIPSWVHDPFGTAIRGGTVGMPNPSTDQMSAEQLSALSPSRTAESITRD 127
Query: 75 HVIEAPLDQTTGVQVSGNT-VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
P V N+ V + ++ + ++L++L ++ ++ +
Sbjct: 128 DQFSGPRAAMEQVVYHDNSDVSLEQQVTEIAKNQHLHDLAVTTLRSQFELLRAAIT 183
>gi|163750572|ref|ZP_02157810.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
gi|161329727|gb|EDQ00716.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
Length = 139
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + + YRA+ +L ++
Sbjct: 1 MSLFNIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFAAEMLKASYQQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S + V + E+ Y++N
Sbjct: 61 QSSPSVVVKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ + SM+ +R
Sbjct: 121 QVAEAAKSMLQQTLR 135
>gi|85716543|ref|ZP_01047513.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
gi|85696544|gb|EAQ34432.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
Length = 141
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 19/132 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHET 60
IA+ + R +++SENIAN TP YR + + +F + L++
Sbjct: 13 SIATSGLRAQAGRMRVISENIANVDSTAQTPGGDPYR-RKVPTFSSALDRTLDARVVTLG 71
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKL 116
+K S+ A SGN V E+ + + YE N +
Sbjct: 72 RVKPDMSTFRVKYEPSNPAA-------DASGNVKYPNVNSLVEMTDMRNAQRSYEANLNI 124
Query: 117 IKKLNSMVMHVV 128
I M+ +
Sbjct: 125 ISATRRMIQRTL 136
>gi|170743258|ref|YP_001771913.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
gi|168197532|gb|ACA19479.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
Length = 136
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLM 54
M + IA+ S R +++SENIANA + RA + + +F L++
Sbjct: 1 MDFMKAIGIAASGLRAQSGRMRVISENIANADSEPTRAGVEPYRRKVPTFANRLDRELDA 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ D + D VQ+ V + E + YE N
Sbjct: 61 RMVDLGRVRR-DQAPFRTKHDPGNPVADAKGDVQLP--NVNLLVETVDMREAQRSYEANL 117
Query: 115 KLIKKLNSMVMHVV 128
++ M+ +
Sbjct: 118 NMVTAARRMISRTI 131
>gi|161503737|ref|YP_001570849.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865084|gb|ABX21707.1| hypothetical protein SARI_01822 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 134
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 14/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + + +
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQV-----VFQVDAAP 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ S V E PL G N V + E+ + Y+
Sbjct: 56 GQATGGVKVASVIESQAPEKLVYEPGNPLADANGYVKMPN-VDVVGEMVNTMSASRSYQA 114
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ + SM++ +
Sbjct: 115 NVEVLNTVKSMMLKTLT 131
>gi|120598230|ref|YP_962804.1| flagellar basal body rod protein FlgC [Shewanella sp. W3-18-1]
gi|146293692|ref|YP_001184116.1| flagellar basal body rod protein FlgC [Shewanella putrefaciens
CN-32]
gi|120558323|gb|ABM24250.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
gi|145565382|gb|ABP76317.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
CN-32]
gi|319427091|gb|ADV55165.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens 200]
Length = 138
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F +A + S R + NIANA + + YR++ FE + +
Sbjct: 1 MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRH-PIFEAEMAKAQSQ 59
Query: 55 ARTHETHL--KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+T + +S + + P+ G N V + E+ Y++
Sbjct: 60 QQTSQGVTVRGIVESDKPLLKEYSPDHPMADADGFIYKPN-VNVMEEMADMISASRSYQM 118
Query: 113 NTKLIKKLNSMVMHVV 128
N ++ + SM+ +
Sbjct: 119 NVQVAEAAKSMLQQTL 134
>gi|316932834|ref|YP_004107816.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
DX-1]
gi|315600548|gb|ADU43083.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
DX-1]
Length = 141
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M IA+ + R +++SENIANA T YR + + +F + L+++
Sbjct: 6 MDFSRSMAIATSGLRAQAGRMRVISENIANADSTAQTAGGDPYR-RKVPTFTSALDRSLD 64
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+K D+S D V+ V E+ + YE N
Sbjct: 65 ARVVALGRVKP-DTSAFRVKYEPTNPAADANGNVKYP--NVNPVIEMTDMRDAQRSYEAN 121
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 122 LNVISATRRMIQRTL 136
>gi|121607563|ref|YP_995370.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
EF01-2]
gi|121552203|gb|ABM56352.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
EF01-2]
Length = 134
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F ++ + ++R +V+ N+AN P+ Y+A+ + F+T
Sbjct: 1 MSMLSIFNLSGSAISAQAQRLNVVASNLANVDAVAGPDGQPYKARQVV-FQTAPMGAPSA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + ES G + Q + N V E+ Y+ N
Sbjct: 60 AGVRVIAISESQVPGRRVHDPGHPLADAQGYVTHSNVNAV---QEMVDMISAARSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVMNTAKSLLLKTLQ 131
>gi|124268256|ref|YP_001022260.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
gi|124261031|gb|ABM96025.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
Length = 138
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+ANA T P+ Y+A+ + Q
Sbjct: 1 MSMLNIFNVSGSAVSAQSQRLNVVASNLANADTVAGPDGKAYKARQVVFQTLPFQQPGEA 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + V+ + V E+ Y+ N
Sbjct: 61 GTAAGVQVSQVTEDNAPGRKVLDPKHPQADADGYVTYSNVNAVEEMVNMISASRSYQNNI 120
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 121 EVMNTAKTLLLKTLQ 135
>gi|163758013|ref|ZP_02165101.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
gi|162284302|gb|EDQ34585.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
Length = 142
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 1 MQPITFF-QIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
+ P++ +IAS + R +I+SEN+AN+ TP YR K I SF L+++
Sbjct: 4 VDPLSLASRIASSGLDVQETRMRILSENLANSQSTGDTPGADAYRRKTI-SFSWELDRSI 62
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+R + + D +N V V + EL YE
Sbjct: 63 GASRAK---VAKIDFDPGEFNVQYDPGNPAANEEGMVKLPNVNVLVELADMREANRSYEA 119
Query: 113 NTKLIKKLNSMVMHVV 128
N + +K+ +V +
Sbjct: 120 NLQTVKQTRELVSMTL 135
>gi|90418393|ref|ZP_01226305.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
SI85-9A1]
gi|90338065|gb|EAS51716.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
SI85-9A1]
Length = 138
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 9/131 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLMART 57
++ +IA+ S R +IVSENIANA T + + SF++ L++
Sbjct: 6 LSSLKIAASGLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSGAQMV 65
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ D+ + + A + V + E+ YE N +++
Sbjct: 66 SVDKVGRDDTPFILESDPGNPAANADGYVKMPN---VRMLVEMADMREANRSYEANIQVV 122
Query: 118 KKLNSMVMHVV 128
K+ ++ +
Sbjct: 123 KQAREIINMTI 133
>gi|254445164|ref|ZP_05058640.1| hypothetical protein VDG1235_3407 [Verrucomicrobiae bacterium
DG1235]
gi|198259472|gb|EDY83780.1| hypothetical protein VDG1235_3407 [Verrucomicrobiae bacterium
DG1235]
Length = 92
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 12/100 (12%)
Query: 32 STPNYRAKDI-SSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
TP Y+ DI + FE L Q + +S+ + + V+
Sbjct: 2 ETPGYKRIDIETDFEAKLRQ-----------VAKSNDVSGIQDLQFRTVTDLGSPSVRPD 50
Query: 91 GNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
GN V I E+ YE S + + G
Sbjct: 51 GNNVQIDQEMLNMQKNAVQYEFLANYTSNSLSRLKTAISG 90
>gi|53717912|ref|YP_106898.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
K96243]
gi|53724563|ref|YP_104796.1| flagellar basal body rod protein FlgC [Burkholderia mallei ATCC
23344]
gi|76809289|ref|YP_331878.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
1710b]
gi|121599639|ref|YP_994289.1| flagellar basal body rod protein FlgC [Burkholderia mallei SAVP1]
gi|124385719|ref|YP_001028062.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
10229]
gi|126439110|ref|YP_001057320.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
668]
gi|126450357|ref|YP_001082869.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
10247]
gi|126454889|ref|YP_001064562.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
1106a]
gi|134283634|ref|ZP_01770333.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
305]
gi|167001534|ref|ZP_02267329.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
gi|167717658|ref|ZP_02400894.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
DM98]
gi|167736701|ref|ZP_02409475.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
14]
gi|167813799|ref|ZP_02445479.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
91]
gi|167822316|ref|ZP_02453787.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 9]
gi|167843906|ref|ZP_02469414.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
B7210]
gi|167892408|ref|ZP_02479810.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
7894]
gi|167900906|ref|ZP_02488111.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
NCTC 13177]
gi|167909125|ref|ZP_02496216.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
112]
gi|167917162|ref|ZP_02504253.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
BCC215]
gi|217424916|ref|ZP_03456412.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
576]
gi|226199800|ref|ZP_03795351.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
Pakistan 9]
gi|237810459|ref|YP_002894910.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
MSHR346]
gi|238562527|ref|ZP_00440313.2| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
horse 4]
gi|242316173|ref|ZP_04815189.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1106b]
gi|254174790|ref|ZP_04881451.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
10399]
gi|254182142|ref|ZP_04888739.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1655]
gi|254188072|ref|ZP_04894584.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
Pasteur 52237]
gi|254197006|ref|ZP_04903430.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
S13]
gi|254201894|ref|ZP_04908258.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
gi|254207228|ref|ZP_04913579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
gi|254258642|ref|ZP_04949696.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1710a]
gi|254295812|ref|ZP_04963269.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
406e]
gi|254359730|ref|ZP_04976001.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
2002721280]
gi|42766726|gb|AAS45446.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
gi|52208326|emb|CAH34259.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
gi|52427986|gb|AAU48579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
23344]
gi|76578742|gb|ABA48217.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1710b]
gi|121228449|gb|ABM50967.1| flagellar basal-body rod protein FlgC [Burkholderia mallei SAVP1]
gi|124293739|gb|ABN03008.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
10229]
gi|126218603|gb|ABN82109.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
668]
gi|126228531|gb|ABN92071.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1106a]
gi|126243227|gb|ABO06320.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
10247]
gi|134245043|gb|EBA45138.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
305]
gi|147747788|gb|EDK54864.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
gi|147752770|gb|EDK59836.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
gi|148028944|gb|EDK86876.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
2002721280]
gi|157805705|gb|EDO82875.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
406e]
gi|157935752|gb|EDO91422.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
Pasteur 52237]
gi|160695835|gb|EDP85805.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
10399]
gi|169653749|gb|EDS86442.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
S13]
gi|184212680|gb|EDU09723.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1655]
gi|217391936|gb|EEC31962.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
576]
gi|225928151|gb|EEH24187.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
Pakistan 9]
gi|237504017|gb|ACQ96335.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
MSHR346]
gi|238522487|gb|EEP85931.1| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
horse 4]
gi|242139412|gb|EES25814.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1106b]
gi|243062736|gb|EES44922.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
gi|254217331|gb|EET06715.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
1710a]
Length = 141
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + P+ Y+AK + + + +
Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ S D S + DQ V + V E+ Y+ N
Sbjct: 65 GVGGVQVSKVIDDPSPMKTAYDPSNPAADQNGYVTMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|167835109|ref|ZP_02461992.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
MSMB43]
Length = 141
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + P+ Y+AK + + + +
Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + DQ V + V E+ Y+ N
Sbjct: 65 GVGGVQVTKVVDDPSPMKTTYDPSNPAADQNGYVTMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|94312667|ref|YP_585876.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
CH34]
gi|93356519|gb|ABF10607.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
CH34]
Length = 135
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F +A S+R + + N+ANA + PN YRAK + +
Sbjct: 1 MGTMSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDV 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E + + + N V E+ Y+ N
Sbjct: 61 GGVQVAGVMEDTAPARMVHNPSHPLADANGYVTMPNVNPV---EEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ +M++ +
Sbjct: 118 EVLNTAKNMMLKTLT 132
>gi|332088752|gb|EGI93864.1| flagellar basal-body rod protein FlgC [Shigella boydii 5216-82]
Length = 134
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNQLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVM 125
+++ + SM++
Sbjct: 117 EVLNTVKSMML 127
>gi|148266117|ref|YP_001232823.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
gi|146399617|gb|ABQ28250.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
Length = 244
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+R +++S N+ANA+TP ++ D FE++L T SG + +
Sbjct: 17 QRLEVISNNLANANTPGFKG-DRLQFESVLANTKNPTLTAGNLTDLPVFSGEKFFTNYSA 75
Query: 79 APLDQTTGVQVSGNT--VGIT 97
PL QT GNT V +
Sbjct: 76 GPLKQT------GNTLDVALD 90
>gi|167568105|ref|ZP_02361021.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
EO147]
gi|167574223|ref|ZP_02367097.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
C6786]
Length = 141
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + P+ Y+AK + + + +
Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + DQ V + V E+ Y+ N
Sbjct: 65 GVGGVQVTKVIDDPSPMKTAYDPSNPAADQNGYVTMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|320173527|gb|EFW48723.1| Flagellar basal-body rod protein FlgC [Shigella dysenteriae CDC
74-1112]
Length = 134
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA +R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQFQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|182412250|ref|YP_001817316.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
gi|177839464|gb|ACB73716.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
Length = 139
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M I+ I + N R +V++NIANA T PN Y+ + + SFET L + +
Sbjct: 1 MNLISGIDITAGALNAQKTRLDMVAQNIANAQTTRTPNGGPYQ-RQVVSFETELVRREGL 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLY 110
+ +K ++ + + P G G V ++ E+ Y
Sbjct: 60 SGPALQSVKVANVTADRSPGQQVFNPQHPDAG--PDGLVTMPNVNLSYEMVDLITASRAY 117
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N +++ M + ++
Sbjct: 118 EANLAVVRNARQMAVKTLQ 136
>gi|154253013|ref|YP_001413837.1| flagellar basal body rod protein FlgC [Parvibaculum lavamentivorans
DS-1]
gi|154156963|gb|ABS64180.1| flagellar basal-body rod protein FlgC [Parvibaculum lavamentivorans
DS-1]
Length = 139
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLM 54
M I +A+ S R ++++ENIANA + + A + I +FE LN+
Sbjct: 4 MDLIKSMMVAASGLKAQSGRMRVIAENIANADSTSRVAGGDPYRRKIVTFEDKLNREIGA 63
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ A + + N + E + YE N
Sbjct: 64 NTVSLGRPVLDKTEFQLKYMPGHPAADEAGYVKMPNVNGMV---EAMDMREAQRSYEANL 120
Query: 115 KLIKKLNSMVMHVV 128
LI+ M+ +
Sbjct: 121 NLIQASRRMISQTI 134
>gi|32474823|ref|NP_867817.1| flagellar basal-body rod protein FlgB [Rhodopirellula baltica SH 1]
gi|32445363|emb|CAD75364.1| probable flagellar basal-body rod protein FlgB [Rhodopirellula
baltica SH 1]
Length = 188
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 51/176 (28%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNF---------- 52
T Q + R ++++ NIAN STP+YR++D+ F+T L ++
Sbjct: 10 TTIGALEQTLAFTERRHELLAGNIANLSTPDYRSRDLDQGQFQTALAESIRDRGKGPSPA 69
Query: 53 --------------------------------------LMARTHETHLKESDSSGLHWNA 74
M+ + L S ++
Sbjct: 70 PEIAQPDLSQGHIPSWVHDPFGTAIRGGTVGMPNPSSDQMSAEQLSALSPSRTAESITRD 129
Query: 75 HVIEAPLDQTTGVQVSGNT-VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
P V N+ V + ++ + ++L++L ++ ++ +
Sbjct: 130 DQFSGPRAAMEQVVYHDNSDVSLEQQVTEIAKNQHLHDLAVTTLRSQFELLRAAIT 185
>gi|91976172|ref|YP_568831.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
BisB5]
gi|91682628|gb|ABE38930.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
BisB5]
Length = 141
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHET 60
IA+ + R +++SENIANA T YR + + +F + L+++ ART
Sbjct: 13 GIATSGLRAQAGRMRVISENIANAESTAQTAGGDPYR-RKVPTFTSALDRSLD-ARTVAL 70
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ D+S D V+ + N+V E+ + + YE N +I
Sbjct: 71 GRVKPDTSAFRVKYEPTNPSADAAGNVKYPNVNSVI---EMTDMRNAQRSYEANLNVISA 127
Query: 120 LNSMVMHVV 128
M+ +
Sbjct: 128 TRRMIQRTL 136
>gi|83720057|ref|YP_440799.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
E264]
gi|167579486|ref|ZP_02372360.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
TXDOH]
gi|167617583|ref|ZP_02386214.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
Bt4]
gi|257140550|ref|ZP_05588812.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
E264]
gi|83653882|gb|ABC37945.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
E264]
Length = 141
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + P+ Y+AK + + +
Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + DQ V + V E+ Y+ N
Sbjct: 65 GVGGVQVTKVIDDPSPMKTTYDPSNPAADQNGYVTMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|241766918|ref|ZP_04764724.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
gi|241362622|gb|EER58470.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
Length = 134
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+AN P+ Y+A+ + F+T
Sbjct: 1 MSMFSIFSVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVV-FQTAPMGADSS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + E+++ G + + Q + N V E+ Y+ N
Sbjct: 60 AGVRVSAISENNTPGRRIHDPSHPSADAQGYVTHSNVNAVD---EMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVMNTAKSLLLKTLQ 131
>gi|16760051|ref|NP_455668.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16764531|ref|NP_460146.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142178|ref|NP_805520.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56413838|ref|YP_150913.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62179692|ref|YP_216109.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161614602|ref|YP_001588567.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553037|ref|ZP_02346787.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994039|ref|ZP_02575131.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234101|ref|ZP_02659159.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237257|ref|ZP_02662315.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244774|ref|ZP_02669706.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264032|ref|ZP_02686005.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467127|ref|ZP_02700969.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822618|ref|ZP_02834618.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446237|ref|YP_002040429.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448226|ref|YP_002045174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469652|ref|ZP_03075636.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194737972|ref|YP_002114174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250491|ref|YP_002146868.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264065|ref|ZP_03164139.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362761|ref|YP_002142398.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198244048|ref|YP_002215962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389763|ref|ZP_03216374.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930701|ref|ZP_03221574.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205353087|ref|YP_002226888.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857317|ref|YP_002243968.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213161846|ref|ZP_03347556.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213419883|ref|ZP_03352949.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213424678|ref|ZP_03357443.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582035|ref|ZP_03363861.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213615928|ref|ZP_03371754.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648924|ref|ZP_03378977.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865507|ref|ZP_03387626.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224584321|ref|YP_002638119.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911005|ref|ZP_04654842.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289828582|ref|ZP_06546407.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|60392283|sp|P0A1I7|FLGC_SALTY RecName: Full=Flagellar basal-body rod protein flgC; AltName:
Full=Putative proximal rod protein
gi|60392284|sp|P0A1I8|FLGC_SALTI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
Full=Putative proximal rod protein
gi|25298909|pir||AH0639 probable flagellar basal-body rod protein FlgC (proximal rod
protein) STY1214 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16419692|gb|AAL20105.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16502345|emb|CAD08299.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137808|gb|AAO69369.1| putative flagellar basal-body rod protein FlgC [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56128095|gb|AAV77601.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62127325|gb|AAX65028.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161363966|gb|ABX67734.1| hypothetical protein SPAB_02352 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404900|gb|ACF65122.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406530|gb|ACF66749.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456016|gb|EDX44855.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194713474|gb|ACF92695.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630453|gb|EDX49079.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197094238|emb|CAR59743.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197214194|gb|ACH51591.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197242320|gb|EDY24940.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289825|gb|EDY29186.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197938564|gb|ACH75897.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602208|gb|EDZ00754.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320160|gb|EDZ05364.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205272868|emb|CAR37797.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322443|gb|EDZ10282.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328049|gb|EDZ14813.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331940|gb|EDZ18704.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336413|gb|EDZ23177.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341032|gb|EDZ27796.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347372|gb|EDZ34003.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709120|emb|CAR33453.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468848|gb|ACN46678.1| flagellar basal body rod protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261246386|emb|CBG24195.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992949|gb|ACY87834.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157716|emb|CBW17208.1| putative flagellar basal-body rod protein FlgC (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912162|dbj|BAJ36136.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086385|emb|CBY96158.1| Flagellar basal-body rod protein flgC [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223793|gb|EFX48856.1| Flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616545|gb|EFY13454.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620514|gb|EFY17378.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622508|gb|EFY19353.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629659|gb|EFY26434.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632621|gb|EFY29367.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636884|gb|EFY33587.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641578|gb|EFY38216.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644068|gb|EFY40614.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322653957|gb|EFY50280.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658489|gb|EFY54751.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663347|gb|EFY59549.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670081|gb|EFY66221.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674855|gb|EFY70946.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676675|gb|EFY72742.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682597|gb|EFY78616.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686650|gb|EFY82629.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322714162|gb|EFZ05733.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323129445|gb|ADX16875.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195764|gb|EFZ80940.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198344|gb|EFZ83448.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203172|gb|EFZ88202.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209175|gb|EFZ94112.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209679|gb|EFZ94608.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217865|gb|EGA02580.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222153|gb|EGA06537.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224925|gb|EGA09183.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229667|gb|EGA13790.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232892|gb|EGA16988.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240627|gb|EGA24669.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242941|gb|EGA26962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250258|gb|EGA34147.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252633|gb|EGA36471.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258839|gb|EGA42492.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261028|gb|EGA44621.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266937|gb|EGA50422.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269978|gb|EGA53427.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326623710|gb|EGE30055.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628167|gb|EGE34510.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332988066|gb|AEF07049.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 134
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 14/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + + +
Sbjct: 1 MALLNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQV-----VFQVDAAP 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ S V E PL G N V + E+ + Y+
Sbjct: 56 GQATGGVKVASVIESQAPEKLVYEPGNPLADANGYVKMPN-VDVVGEMVNTMSASRSYQA 114
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ + SM++ +
Sbjct: 115 NIEVLNTVKSMMLKTLT 131
>gi|149927796|ref|ZP_01916047.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
gi|149823418|gb|EDM82649.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
Length = 140
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 15/139 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PN--YRAKDISSFETILNQNFLM 54
M F++A + R V+ N+AN T PN Y+A+ + FE +L +
Sbjct: 1 MSLFNSFKLAGGAMQAQTTRLNTVASNLANVDTAAGDPNSVYQARKVV-FEAVLQKAAPG 59
Query: 55 ART-----HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ + E + + + N V E+
Sbjct: 60 KASLAENVQVKDIVEDKTEAKKMFDPKHPMADEDGYVYMPNVNAV---EEMVDMLAASRS 116
Query: 110 YELNTKLIKKLNSMVMHVV 128
Y+ N +++ +++ +
Sbjct: 117 YQTNAEVMNTAKQLMLKTL 135
>gi|94500239|ref|ZP_01306772.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
gi|94427538|gb|EAT12515.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
Length = 148
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQ--NF 52
M F +A N S R + NIANA T + YRA+ + L + +
Sbjct: 1 MSLTNVFNVAGTGMNAQSVRLNTTASNIANAETVSSSIDETYRAR--KPWFQALQKEWDD 58
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEA-----------PLDQTTGVQVSGNTVGITNELY 101
+ + + L++ G+H A V P+ G + N V I E+
Sbjct: 59 IEGLSDKLELRKGVGDGVHVAAIVESDAPLKRRFEPHHPMADEEGYVMYPN-VNIVEEMT 117
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVVR 129
Y++N +++K M+ +
Sbjct: 118 DMMSSSRSYQMNVEMMKTAKQMLQRTLT 145
>gi|254251189|ref|ZP_04944507.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
gi|124893798|gb|EAY67678.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
Length = 141
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D+ VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVIDDPSPMKSTYDPANPAADENGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|312135856|ref|YP_004003194.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
owensensis OL]
gi|311775907|gb|ADQ05394.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
owensensis OL]
Length = 145
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 17/136 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETH 61
I+S R ++++NIANA+T YR + I FE +
Sbjct: 6 NISSSALTAQRVRMDVIAQNIANANTTRTENGQPYR-RKIVVFEERKQNFSQILNQKIEQ 64
Query: 62 LKESDSSGLHWNAHVIEAPL----DQTTGVQVSGN------TVGITNELYKSGHIKYLYE 111
++ S S G+ A + + T N V I E+ YE
Sbjct: 65 IQASSSGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 124
Query: 112 LNTKLIKKLNSMVMHV 127
N + SM+
Sbjct: 125 ANVTALNITKSMITRT 140
>gi|313895871|ref|ZP_07829425.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
137 str. F0430]
gi|312975296|gb|EFR40757.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
137 str. F0430]
Length = 151
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTP------NYRAKDISS----------FETILNQN 51
A+ R ++S NIANA+T Y + + FE+ L +
Sbjct: 8 DAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQPREKGNGIGFESFLARA 67
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
R + S + V E D V V I +E+ Y
Sbjct: 68 SERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDMISASRGY 127
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N I SMV +R
Sbjct: 128 EANATTINAAKSMVNAALR 146
>gi|253996321|ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
gi|253983000|gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
Length = 135
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-------TPNYRAKDISSFETILNQNFL 53
M F I+ + ++R V+ N+ANA TP Y++K + F + +++
Sbjct: 1 MSLFNVFNISGSAMSAQAQRLNTVASNLANADSATSANGTP-YKSKQVV-FSAMPSKSPD 58
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ T + E S+ D+ + V +T E+ Y+ N
Sbjct: 59 VSGVKVTKVVEDKSAPRMIYDPKHPLANDKGYVSMPN---VNVTEEMVNMISASRAYQNN 115
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +M+M +
Sbjct: 116 VETMNATKTMLMKTLT 131
>gi|152980444|ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
Marseille]
gi|151280521|gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
Marseille]
Length = 135
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN------ASTPNYRAKDISSFETILNQNFLM 54
M F ++ + S+R +VS NIAN A YRAK + +
Sbjct: 1 MSLFNIFNVSGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQAQQMKGGATS 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E D+S L D+T V + V + E+ Y+ N
Sbjct: 61 TGVRVNRVVE-DTSPLKMVFDPKHPNADETGHVAMP--NVNVVEEMVNMISASRSYQTNV 117
Query: 115 KLIKKLNSMVMHVVR 129
+ + +M++ +
Sbjct: 118 ETMNTAKTMLLKTLT 132
>gi|317492430|ref|ZP_07950859.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919769|gb|EFV41099.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 134
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSMLNIFDISGSALAAQSQRMNVAASNMANADSVTGPDGEPYRAKQVV-FEVQAAPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ L + S + + V + E+ S Y+ N
Sbjct: 60 GGVKVSQLVDDPSPERLVYQPGNPLADAKGYVRMPN---VDVVGEMVNSIAASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++M +
Sbjct: 117 EVLNTTKSLMMKTLT 131
>gi|157371209|ref|YP_001479198.1| flagellar basal body rod protein FlgC [Serratia proteamaculans 568]
gi|157322973|gb|ABV42070.1| flagellar basal-body rod protein FlgC [Serratia proteamaculans 568]
Length = 134
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+ANA + P+ YRAK + FE
Sbjct: 1 MSLLNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVV-FEVASAAGQPT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + E+ + Y+ N
Sbjct: 60 GGVRVAQVVDDPAPERLVYQPGNPLADGKGYVRMPN---VDVVGEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ SM+M +
Sbjct: 117 EVLNTTKSMMMKTLT 131
>gi|323165582|gb|EFZ51369.1| flagellar basal-body rod protein FlgC [Shigella sonnei 53G]
Length = 134
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNMVKSMMLKTLT 131
>gi|170768138|ref|ZP_02902591.1| flagellar basal-body rod protein FlgC [Escherichia albertii
TW07627]
gi|170122904|gb|EDS91835.1| flagellar basal-body rod protein FlgC [Escherichia albertii
TW07627]
Length = 134
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKWVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVM 125
+++ + SM++
Sbjct: 117 EVLNTVKSMML 127
>gi|226944490|ref|YP_002799563.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
gi|226719417|gb|ACO78588.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
Length = 135
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA + S+R + + N+AN + YRAK + FE++
Sbjct: 1 MSMFNIFDIAGSALSAQSQRMNVTASNLANVDSVGSEDGQAYRAKQVL-FESMARGRSDT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S ++ + V +E+ Y+ N
Sbjct: 60 GGVRVVQVVEDPSPLRQEYRPEHPLANEEGYVSLPN---VEPVHEMVNMIAASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ M++ +
Sbjct: 117 EVMNTSKQMLLKTLT 131
>gi|332525068|ref|ZP_08401248.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
JA2]
gi|332108357|gb|EGJ09581.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
JA2]
Length = 139
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQN--- 51
M F ++ + S+R +V+ N+ANA T P+ Y+A+ + +++
Sbjct: 1 MSMFRIFDVSGSAVSAQSQRLNVVASNLANADTVAGPDGQAYKARQVVFQTALMDAGADP 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
A + ++E S G + A + + N V E+ Y+
Sbjct: 61 ASAAGVRVSTIREDASPGRRVHDPKHPAADAEGYVTFSNVNAV---QEMVDMISASRSYQ 117
Query: 112 LNTKLIKKLNSMVMHVVR 129
N +++ +++ ++
Sbjct: 118 NNVEVMNTAKTLLQKTLQ 135
>gi|319403959|emb|CBI77547.1| Flagellar basal-body rod protein flgC [Bartonella rochalimae ATCC
BAA-1498]
Length = 138
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANAS----TPNYRA--KDISSFETILNQNFLMARTHETH 61
QIA+ + S R ++++EN+ANA+ +P R + SFE LN H T
Sbjct: 10 QIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYLDAQGVHVTR 69
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +D + D V+ V E+ YE N ++I++
Sbjct: 70 IS-TDKAPFIMRYEPGHLAADSNGYVKYP--NVNSIIEMADMREANRSYEANLQVIRQAR 126
Query: 122 SMVMHVV 128
++ +
Sbjct: 127 DLISQTI 133
>gi|319406974|emb|CBI80611.1| Flagellar basal-body rod protein flgC [Bartonella sp. 1-1C]
Length = 138
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANAS----TPNYRA--KDISSFETILNQNFLMARTHETH 61
QIA+ + S R ++++EN+ANA+ +P R + SFE LN H T
Sbjct: 10 QIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDAQGVHVTR 69
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +D + D V+ V E+ YE N ++I++
Sbjct: 70 IS-TDKAPFIMRYEPGHLAADSNGYVKYP--NVNSIIEMADMREANRSYEANLQVIRQAR 126
Query: 122 SMVMHVV 128
++ +
Sbjct: 127 DLISQTI 133
>gi|296534150|ref|ZP_06896646.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
49957]
gi|296265526|gb|EFH11655.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
49957]
Length = 136
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M +++ + S R ++V+EN+AN TP YR K ++ F L++
Sbjct: 1 MDLERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVT-FANRLDRALG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + + A + + + V E+ + Y N
Sbjct: 60 AETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPN---VDSMVEMMDMREAQRSYSAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+++ +M+ +
Sbjct: 117 LSVLETTRAMIQRAI 131
>gi|167585192|ref|ZP_02377580.1| flagellar basal-body rod protein FlgC [Burkholderia ubonensis Bu]
Length = 141
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + NIANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNIANADSATGPDGKPYKAKQVVFAADPQGRARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVAKVIDDPSPMKSTYDPANPAADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|134297200|ref|YP_001120935.1| flagellar basal body rod protein FlgC [Burkholderia vietnamiensis
G4]
gi|134140357|gb|ABO56100.1| flagellar basal-body rod protein FlgC [Burkholderia vietnamiensis
G4]
Length = 141
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + L +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|188581884|ref|YP_001925329.1| flagellar basal body rod protein FlgC [Methylobacterium populi
BJ001]
gi|179345382|gb|ACB80794.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
BJ001]
Length = 136
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + IA+ S R +I++ENIANA TP YR + I +F ++
Sbjct: 1 MDFLKSLGIAASGLKAQSGRMRIIAENIANADSAAQTPGGDPYR-RKIPTFTNRFDRELN 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ ++ + A + + V E + YE N
Sbjct: 60 ASVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLPN---VNGLIENMDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
++ M+ +
Sbjct: 117 LNMVTATRRMISRTL 131
>gi|311280019|ref|YP_003942250.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
gi|308749214|gb|ADO48966.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
Length = 134
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F +A S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLSIFDVAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVV-FQVDAPIGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVANVVESQAPDKLVFQPGNPLADAKGYVRMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|217059|dbj|BAA02862.1| FlgC [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|581758|emb|CAA36310.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 134
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 14/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + + +
Sbjct: 1 MALLNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQV-----VFQVDAAP 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ S V E PL G N V + E+ + Y+
Sbjct: 56 GQATGGVKVASVIESQAPEKLVYEPGNPLADANGYVKMPN-VDVVGEMVNTMSASRTYQA 114
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ + SM++ +
Sbjct: 115 NIEVLNTVKSMMLKTLT 131
>gi|114562340|ref|YP_749853.1| flagellar basal body rod protein FlgC [Shewanella frigidimarina
NCIMB 400]
gi|114333633|gb|ABI71015.1| flagellar basal-body rod protein FlgC [Shewanella frigidimarina
NCIMB 400]
Length = 138
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F ++ + S R + NIANA + + YRA+ +L N
Sbjct: 1 MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAEMLKANSQQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S + V + E+ Y++N
Sbjct: 61 NSSPGVTVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ SM+ +R
Sbjct: 121 QVADATKSMLQQTLR 135
>gi|327254552|gb|EGE66168.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
Length = 143
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPAGSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|222147569|ref|YP_002548526.1| flagellar basal body rod protein FlgC [Agrobacterium vitis S4]
gi|221734557|gb|ACM35520.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
Length = 145
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFLMARTHE 59
+IA + S R +IVSENIANA TP YR K I+ F + +++
Sbjct: 14 LKIAGSGLDVQSTRLRIVSENIANAQSTGDTPGANPYRRKTIT-FGSEMDRATGTEIVKV 72
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
L D S D V++ V + E+ YE N + +K+
Sbjct: 73 KKL-GFDKSNFTEEYDPSNPAADAKGYVKMP--NVNVLIEMADMREANRTYEANLQSVKQ 129
Query: 120 LNSMVMHVV 128
++ +
Sbjct: 130 TRDLITSTL 138
>gi|193069522|ref|ZP_03050476.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
gi|192957270|gb|EDV87719.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
Length = 134
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAVSNLANADSVTGPDGQPYRAKQVV-FQVNAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM++ +
Sbjct: 117 EVLNTVKSMMLKTLT 131
>gi|58039961|ref|YP_191925.1| flagellar basal body rod protein FlgC [Gluconobacter oxydans 621H]
gi|58002375|gb|AAW61269.1| Flagellar basal-body rod protein FlgC [Gluconobacter oxydans 621H]
Length = 135
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFL 53
M T I++ + ++R +IV+EN+AN T YR K I+ F ++
Sbjct: 1 MNLSTTIGISASGMDAQAQRLRIVAENLANQDTTGSQPGADPYRRKTIT-FAEHVDDETG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ ++ + D S D+ V+VS V E+ + YE N
Sbjct: 60 ASTVDVQNVGQ-DMSDFDTRYDPSHPAADERGYVKVS--NVDSMTEMMDMREAERSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+ +M+ +
Sbjct: 117 LNALSSTRTMLSRTL 131
>gi|222530141|ref|YP_002574023.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
DSM 6725]
gi|222456988|gb|ACM61250.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
DSM 6725]
Length = 145
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 41/138 (29%), Gaps = 21/138 (15%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDIS------SFETILNQNFLMA 55
I+S + R ++++NIANA+T YR K + SF IL+Q
Sbjct: 6 NISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEERKLSFANILSQKIGEG 65
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYL 109
T + T N V I E+
Sbjct: 66 TTS---FYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRS 122
Query: 110 YELNTKLIKKLNSMVMHV 127
YE N + SM+
Sbjct: 123 YEANVTALNITKSMITRT 140
>gi|312126817|ref|YP_003991691.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
hydrothermalis 108]
gi|311776836|gb|ADQ06322.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
hydrothermalis 108]
Length = 147
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I+S R ++++NIANA+T YR + + FE Q+F
Sbjct: 1 MGMFDAINISSSALTAQRVRMDVIAQNIANANTTKTENGQPYR-RKVVVFEER-RQSFAE 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAP-----LDQTTGVQVSGN------TVGITNELYKS 103
+ + ++ S G ++E P + T N V I E+
Sbjct: 59 ILSQKIGQAQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHV 127
YE N + SM+
Sbjct: 119 IEASRSYEANVTALNITKSMITRT 142
>gi|118444004|ref|YP_877972.1| flagellar basal body rod protein FlgB [Clostridium novyi NT]
gi|118134460|gb|ABK61504.1| flagellar basal-body rod protein FlgB [Clostridium novyi NT]
Length = 134
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETHLK 63
+ + Q N S+R+ +++ NI+N +T Y+ + +FE L + N + T+E H+
Sbjct: 13 YNLIKQALNATSKRKNVINNNISNINTKGYK-RSYVTFEDTLKKSKDNLELKTTNEKHID 71
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ G I D++ +++ GN V I NE+ Y + +
Sbjct: 72 INKKFGE------ISVKKDESDSMKMDGNNVDIDNEMTNLAANTLEYNALITTLNSALAT 125
Query: 124 VMHVVRG 130
+++ G
Sbjct: 126 KRYIING 132
>gi|218703523|ref|YP_002411042.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
gi|293403353|ref|ZP_06647444.1| flgC [Escherichia coli FVEC1412]
gi|298378965|ref|ZP_06988846.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
gi|300900363|ref|ZP_07118538.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
gi|218430620|emb|CAR11486.1| putative Flagellar basal-body rod protein flgC ( proximal rod
protein) [Escherichia coli UMN026]
gi|291429206|gb|EFF02226.1| flgC [Escherichia coli FVEC1412]
gi|298280078|gb|EFI21582.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
gi|300356119|gb|EFJ71989.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
Length = 143
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTIRLNTVASNLANANAPAGSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|148976392|ref|ZP_01813098.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
gi|145964215|gb|EDK29471.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
Length = 137
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + F LN+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARH-AVFGAELNRARNS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + S +A + + V + E+ Y+ N
Sbjct: 60 DHTVPVKVLGIVESDKPLSAEYNPDHPLANNEGFIYKSNVNVMEEMANMISASRAYQTNV 119
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 QVADSSKQMLLRTLQ 134
>gi|312792645|ref|YP_004025568.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179785|gb|ADQ39955.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 147
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I+S R ++++NIANA+T YR + + FE Q+F
Sbjct: 1 MGMFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYR-RKVVVFEER-KQSFAD 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAP-----LDQTTGVQVSGN------TVGITNELYKS 103
T + +S S G ++E P + T N V I E+
Sbjct: 59 ILTQKIGQAQSSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHV 127
YE N + SM+
Sbjct: 119 IEASRSYEANVTALNITKSMITRT 142
>gi|294635608|ref|ZP_06714085.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
23685]
gi|291091060|gb|EFE23621.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
23685]
Length = 134
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I+ S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MSLLSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVV-FQVKPGAGEEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + S + + V + E+ S Y+ N
Sbjct: 60 GGVQVSQVVDDPSPDRLVYQPGNPLADAKGYVRMPN---VDVVGEMVNSIAASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++M +
Sbjct: 117 EVLNTTKSLMMKTLT 131
>gi|319781683|ref|YP_004141159.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167571|gb|ADV11109.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 138
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHE 59
++A+ SER ++VSEN+ANA + YR K I SF + L++ +
Sbjct: 8 LKVAASGLGAQSERLRVVSENLANAQSTGTAPGSDPYRRKTI-SFVSELDRASGSSTVAV 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ S EA ++ + V + E+ YE N +++K+
Sbjct: 67 NSIDRDPSDFPVEFQPGNEAADEKGYVKMPN---VNVLIEMADMTEANRSYEANLQVVKQ 123
Query: 120 LNSMVMHVV 128
++ +
Sbjct: 124 ARDLISMTI 132
>gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula
bermudensis HTCC2503]
gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula
bermudensis HTCC2503]
Length = 127
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+T +IA N S R + V+EN++N TP Y+ K ++ F T Q ++R
Sbjct: 6 LTSLRIAGDGMNAQSFRMRTVNENLSNIDTPGYQRKMLT-FSTGNEQAVRVSR------- 57
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SS H PL G N V + EL + K ++ N + ++ M
Sbjct: 58 MILSSDEARKVHDPGHPLADADGFVEMSN-VDMLTELSDAREAKRSFDANIEAFRQAREM 116
Query: 124 VMHVV 128
++
Sbjct: 117 YAGLI 121
>gi|2916794|emb|CAA11960.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
Length = 139
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P+T ++++ S R +IVSENIANA P +R K I SF +++
Sbjct: 1 MDPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTI-SFAAEVDRAS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ L +D S + D+ V++ + I E+ YE
Sbjct: 60 GASLVEVERL-GTDDSEFNIEFDPGNPAADEKGMVKLP--NLNILIEMADMREANRAYEA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N + IK+ ++ +
Sbjct: 117 NLQTIKQSRDLISQTI 132
>gi|323191536|gb|EFZ76797.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
Length = 143
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ S + N L+
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKAR--SPVFAAVYHNSLL 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|92114100|ref|YP_574028.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
DSM 3043]
gi|91797190|gb|ABE59329.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
DSM 3043]
Length = 135
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+S + S+R + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MSMFSIFDISSSAMSAQSQRMNATASNMANADSVAGPDGEPYRAKHVM-FQAQSQGGSEL 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + E D+ + + V +E+ Y+ N
Sbjct: 60 GGVRATEVVEDDAPPRMEYRPGHPLADEDGYVAMPN---VDPVDEMVDMIAASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ S++ +
Sbjct: 117 EVMNTSKSLMQQTL 130
>gi|254246963|ref|ZP_04940284.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
PC184]
gi|124871739|gb|EAY63455.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
PC184]
Length = 141
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + L +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|170021362|ref|YP_001726316.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
gi|170683008|ref|YP_001742371.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
gi|188492955|ref|ZP_03000225.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
gi|260853464|ref|YP_003227355.1| putative lateral flagellar component of cell-proximal portion of
basal-body rod [Escherichia coli O26:H11 str. 11368]
gi|260866411|ref|YP_003232813.1| putative lateral flagellar component of cell-proximal portion of
basal-body rod [Escherichia coli O111:H- str. 11128]
gi|331645416|ref|ZP_08346520.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
gi|331666544|ref|ZP_08367418.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
gi|331671802|ref|ZP_08372598.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
gi|169756290|gb|ACA78989.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
gi|170520726|gb|ACB18904.1| lateral flagellar basal-body rod protein LfgC [Escherichia coli
SMS-3-5]
gi|188488154|gb|EDU63257.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
gi|257752113|dbj|BAI23615.1| predicted lateral flagellar component of cell-proximal portion of
basal-body rod [Escherichia coli O26:H11 str. 11368]
gi|257762767|dbj|BAI34262.1| predicted lateral flagellar component of cell-proximal portion of
basal-body rod [Escherichia coli O111:H- str. 11128]
gi|323158105|gb|EFZ44204.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
gi|323171061|gb|EFZ56710.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
gi|323181545|gb|EFZ66965.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
gi|331045578|gb|EGI17704.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
gi|331065768|gb|EGI37652.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
gi|331070791|gb|EGI42150.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
Length = 143
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|330818587|ref|YP_004362292.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
gi|327370980|gb|AEA62336.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
Length = 141
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 16/138 (11%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + P+ YRAK + FET Q ART
Sbjct: 5 MNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVV-FET---QPVGNART 60
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYLYE 111
+ + N V E+ Y+
Sbjct: 61 RSGQGVGGVQVKQVIDDPSPMKTNYDPSNPAADANGYVTMPNVDPVQEMVNMISASRSYQ 120
Query: 112 LNTKLIKKLNSMVMHVVR 129
N + + +++ +
Sbjct: 121 ANVETLNTAKQLMLKTLT 138
>gi|251789166|ref|YP_003003887.1| flagellar basal body rod protein FlgC [Dickeya zeae Ech1591]
gi|271500064|ref|YP_003333089.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
gi|307131611|ref|YP_003883627.1| flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
gi|247537787|gb|ACT06408.1| flagellar basal-body rod protein FlgC [Dickeya zeae Ech1591]
gi|270343619|gb|ACZ76384.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
gi|306529140|gb|ADM99070.1| Flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
Length = 134
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 34/147 (23%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+ANA + P+ YRAK +
Sbjct: 1 MSLLNIFDISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVF----------- 49
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------------TVGITNELYK 102
E ++G A V+E P + Q GN V NE+
Sbjct: 50 ----EVDAAPGQATGGVKVAKVVEDPSPEKLVYQP-GNPLADAKGYVRMPNVDPVNEMVN 104
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ Y+ N +++ SM++ +
Sbjct: 105 TISASRSYQANVEVLNTTKSMMLKTLT 131
>gi|170725953|ref|YP_001759979.1| flagellar basal body rod protein FlgC [Shewanella woodyi ATCC
51908]
gi|169811300|gb|ACA85884.1| flagellar basal-body rod protein FlgC [Shewanella woodyi ATCC
51908]
Length = 139
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F ++ + S R + NIANA + + YRA+ + +
Sbjct: 2 MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSIDETYRARHPIFEAEMAKASHQQ 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S T + V + E+ Y++N
Sbjct: 62 QSSQSVAVKGIVESDAPLQKEYSPNHPMADTDGFIYKPNVNVMEEMADMISASRSYQMNV 121
Query: 115 KLIKKLNSMVMHVVR 129
++ + SM+ +R
Sbjct: 122 QVAEAAKSMLQQTLR 136
>gi|260222465|emb|CBA32056.1| Flagellar basal-body rod protein flgC [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 134
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+ANA Y+++ + FET+ +
Sbjct: 1 MSMFSIFNVSGSAVSAQSQRLNVVASNLANADAVAGPDGQGYKSRQVV-FETVPMGSEAS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +KES+ + + + Q + N V E+ Y+ N
Sbjct: 60 SGVKVSSIKESNEPLRKVHNPLHPSADADGYVTQSNVNPV---EEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVMNTAKSLLLKTLQ 131
>gi|308186391|ref|YP_003930522.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
gi|308056901|gb|ADO09073.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
Length = 134
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVV-FQTDAAPGSAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + +E + Y+ N
Sbjct: 60 GGVKVARVVDDPTPAKLVYDPGNPMADAKGYVKMPN---VDVVSESVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM+M +
Sbjct: 117 EVLNTVKSMMMKTLT 131
>gi|225159033|ref|ZP_03725343.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
gi|224802412|gb|EEG20674.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
Length = 140
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ S N R I+++NIANA T PN Y+ + +S + N+ +
Sbjct: 1 MNLLSGIGPTSSALNAQKTRLDIIAQNIANAHTTRGPNGLPYQRQMVSFESELTNKLGQI 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLY 110
++ S SG + P SG V + E+ Y
Sbjct: 61 DGVPLRSVRVSSVSGDTTAGQRVYDPQHPDA--DASGMVTMPNVNLAYEMVDLITASRTY 118
Query: 111 ELNTKLIKKLNSMVMHVV 128
E N +++K M + +
Sbjct: 119 EANLQVVKNSRQMALKAL 136
>gi|315648140|ref|ZP_07901241.1| flagellar basal-body rod protein FlgB [Paenibacillus vortex V453]
gi|315276786|gb|EFU40129.1| flagellar basal-body rod protein FlgB [Paenibacillus vortex V453]
Length = 135
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-------RTHE 59
FQ + + R +++ NIAN TP+++ ++ SFE++L + A RT
Sbjct: 9 FQRLQSGLDAANLRNNVIANNIANVDTPHFKRSEV-SFESLLKKEMDGADLSLQGRRTDP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + G+ + + + V E+ + Y + + +
Sbjct: 68 RHFVIGPTGGIPDASVMKDGSSSMNNNQNN----VDADREMSLLAENQLRYNSYIQAVNE 123
Query: 120 LNSMVMHVVRG 130
M+ + G
Sbjct: 124 QIRMMRTAIEG 134
>gi|256370952|ref|YP_003108776.1| flagellar basal body rod protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256007536|gb|ACU53103.1| flagellar basal body rod protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 111
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 19/100 (19%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
+ L + ++ N+AN TP Y ++ SF++ L T T + S +
Sbjct: 11 ALDALQIQSDAIANNVANVDTPGYIQSNV-SFQSSLAAALANGGTATTSVTPSSNP---- 65
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
V ++GN V + EL ++ Y+
Sbjct: 66 --------------VGLNGNNVSLGQELTQATTNAMDYQA 91
>gi|312621566|ref|YP_004023179.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202033|gb|ADQ45360.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
kronotskyensis 2002]
Length = 145
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 19/137 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETH 61
I+S + R ++++NIANA+T YR + + FE Q+F + +
Sbjct: 6 NISSSALSAQRVRMDVIAQNIANANTTRTENGQPYR-RKVVVFEES-KQSFADILSQKIG 63
Query: 62 LKESDSSGLHWNAHVIEAP-----LDQTTGVQVSGN------TVGITNELYKSGHIKYLY 110
++ S G ++E P + T N V I E+ Y
Sbjct: 64 KDQTSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSY 123
Query: 111 ELNTKLIKKLNSMVMHV 127
E N + SM+
Sbjct: 124 EANVTALNITKSMITRT 140
>gi|23092313|gb|AAN08638.1| FlgC [Aeromonas hydrophila]
Length = 139
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 14/139 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA + S R V+ N+ANA + + Y A+ F L+Q
Sbjct: 1 MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARR-PIFAAQLDQAMSD 59
Query: 55 ARTHET----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ + ES++ L + + V + E+ + Y
Sbjct: 60 KQASVGVEVKGIVESEAPLLKEYNPGHPMADKDGFIFKPN---VNMVEEMADMTNASRSY 116
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+ N ++ M+ ++
Sbjct: 117 QTNVQVADSAKKMLQQTLQ 135
>gi|317047689|ref|YP_004115337.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
gi|316949306|gb|ADU68781.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
Length = 134
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGQPYVAKQVV-FQTDAAPGMAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + S + + V + E + Y+ N
Sbjct: 60 GGVKVAGVVDDPSPAKLVYDPGNPMADQKGYVKMPN---VDVVAETVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM+M +
Sbjct: 117 EVLNTVKSMMMKTLT 131
>gi|242238967|ref|YP_002987148.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
gi|242131024|gb|ACS85326.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
Length = 134
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+ S+R + + N+ANA + P+ YRAK + F+ + +
Sbjct: 1 MSLTSIFEISGSALTAQSQRMNVSASNLANADSVTGPDGQPYRAKQVV-FKLAATEGQEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S + + V + E+ S Y+ N
Sbjct: 60 GGVRVDDVVEDPSPDKLVYQPGNPLADQRGYVRMPN---VDVAAEMVNSISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +
Sbjct: 117 EVLNTAKTLMQKTLT 131
>gi|88811799|ref|ZP_01127053.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
gi|88791190|gb|EAR22303.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
Length = 139
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F +A + + R I + N+ANA T Y+A+ F LN
Sbjct: 3 MALFDIFDVAGSAMSAQALRLNITASNMANADTVASTPERAYKARQ-PVFAAALNTAHDT 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
L+ +S V + V + Y+ N
Sbjct: 62 VSAVPVQLRGVVTSSAAAEPLYQPNNPLADADGYVYRSNVNTVEAMVNMISASRSYQNNV 121
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +R
Sbjct: 122 EVVSTSRDLLLQTLR 136
>gi|84388089|ref|ZP_00990985.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
gi|84377156|gb|EAP94026.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
Length = 137
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + F LN+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAEETYKARH-AVFGAELNKARNS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + S +A + V + E+ Y+ N
Sbjct: 60 GHTVPVKVLGIVESDKPLSAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNV 119
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 QVADSSKQMLLRTLQ 134
>gi|161526188|ref|YP_001581200.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
ATCC 17616]
gi|189349096|ref|YP_001944724.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
ATCC 17616]
gi|221199737|ref|ZP_03572780.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
CGD2M]
gi|221208658|ref|ZP_03581658.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
CGD2]
gi|221215569|ref|ZP_03588532.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
CGD1]
gi|160343617|gb|ABX16703.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
ATCC 17616]
gi|189333118|dbj|BAG42188.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
17616]
gi|221164557|gb|EED97040.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
CGD1]
gi|221171469|gb|EEE03916.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
CGD2]
gi|221179976|gb|EEE12380.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
CGD2M]
Length = 141
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVIDDPSPMKSTYDPANPAADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|261407987|ref|YP_003244228.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. Y412MC10]
gi|261284450|gb|ACX66421.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. Y412MC10]
Length = 135
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-------RTHE 59
FQ + + R +++ NIAN TP+++ ++ SFE++L + A RT
Sbjct: 9 FQRLQSGLDAANLRNNVIANNIANVDTPHFKRSEV-SFESLLKKEMDGAQLSLQGRRTDP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + G +A VI+ Q V E+ + Y + + +
Sbjct: 68 RHFVIGPT-GSIPDASVIKDGSSSMNNNQN---NVDADREMSLLAENQLRYNSYIQAVNE 123
Query: 120 LNSMVMHVVRG 130
M+ + G
Sbjct: 124 QIRMMRTAIEG 134
>gi|114765223|ref|ZP_01444355.1| flagellar basal-body rod protein C [Pelagibaca bermudensis
HTCC2601]
gi|114542358|gb|EAU45386.1| flagellar basal-body rod protein C [Roseovarius sp. HTCC2601]
Length = 136
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMART 57
T +A+ ER K+VSEN+ANAS+ YR + I SF+ +++++ +
Sbjct: 6 TVLSVAASGMRAQGERLKVVSENVANASSTGNSNGEDPYR-RKIISFQEMVDRDSGASMV 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
++ D + N D+ V+VS V E+ Y+ N +
Sbjct: 65 EVDGVRR-DDADFQLNYDPSHPAADEDGFVKVS--NVNTILEMSNMREASRSYQANLNMF 121
Query: 118 KKLNSM 123
+ SM
Sbjct: 122 ETGRSM 127
>gi|171059414|ref|YP_001791763.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
gi|170776859|gb|ACB34998.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
Length = 136
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F +A + S+R V+ N+ANA T P+ ++A+ + F+++
Sbjct: 1 MSMLNIFNVAGSAVSAQSQRLNAVATNLANADTVAGPDGQSFKARQVM-FQSVQMGEMGA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + E S G + + + N V E+ Y+ N
Sbjct: 60 AGVKVSQITEDQSPGRRVHDPKHPQADAEGYVTYSNVNAV---EEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 117 EVMNTAKTLLLKTLQ 131
>gi|296103613|ref|YP_003613759.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058072|gb|ADF62810.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 134
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ S R + + N+ANA + P+ YRA+ + F + +
Sbjct: 1 MSLFSVFDISGSAMAAQSRRLNVSASNMANADSVAGPDGQPYRARQVV-FSVDASVGQEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ES + +Q + V + NE+ + Y+ N
Sbjct: 60 GGVQVSDVVESSAPDRLVYEPGNPLADEQGYVRMPN---VNVMNEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ +
Sbjct: 117 EVMNSAKSLMLKTLT 131
>gi|329929334|ref|ZP_08283087.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. HGF5]
gi|328936703|gb|EGG33146.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. HGF5]
Length = 135
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-------RTHE 59
FQ + + R +++ NIAN TP+++ ++ SFE++L + A RT
Sbjct: 9 FQRLQSGLDAANLRNNVIANNIANVDTPHFKRSEV-SFESLLKKEMDGAQLSLQGRRTDP 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
H + G +A VI+ Q V E+ + Y + + +
Sbjct: 68 RHFVIGPT-GSIPDASVIKDGSSSMNNNQN---NVDADREMSLLAENQLRYNSYVQAVNE 123
Query: 120 LNSMVMHVVRG 130
M+ + G
Sbjct: 124 QIRMMRTAIEG 134
>gi|115523571|ref|YP_780482.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
BisA53]
gi|115517518|gb|ABJ05502.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
BisA53]
Length = 141
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M IA+ + R ++++ENIANA T YR + + +F T L++
Sbjct: 6 MDFSRSMAIATSGLRAQAGRMRVIAENIANAQSTAQTAGGDPYR-RKVPTFTTALDRALD 64
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+K D+S D V+ V E+ + YE N
Sbjct: 65 ARVVALGRVKP-DTSPFQIKYEPSNPAADAAGNVKYP--NVNPLIEMTDMRDAQRSYEAN 121
Query: 114 TKLIKKLNSMVMHVV 128
+I MV +
Sbjct: 122 LNIISATRRMVQRTL 136
>gi|283833632|ref|ZP_06353373.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
29220]
gi|291071315|gb|EFE09424.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
29220]
Length = 134
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNMANADSVTGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADANGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + S+++ +
Sbjct: 117 EVLNTVKSLMLKTLT 131
>gi|325529011|gb|EGD06024.1| flagellar basal body rod protein FlgC [Burkholderia sp. TJI49]
Length = 141
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|292669734|ref|ZP_06603160.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
43541]
gi|292648531|gb|EFF66503.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
43541]
Length = 151
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 17/139 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTP------NYRAKDISS----------FETILNQN 51
A+ R ++S NIANA+T Y + + FE+ L +
Sbjct: 8 DAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQPREKGNGIGFESFLARA 67
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
R + S + V E D V V I E+ Y
Sbjct: 68 SDRLRPGDGVRAVSIETDRSQGTLVYEPGHPDANADGYVERPNVNIVAEMVDMISASRGY 127
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N I SMV +R
Sbjct: 128 EANATTINAAKSMVTAALR 146
>gi|118588700|ref|ZP_01546108.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
gi|118438686|gb|EAV45319.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
Length = 136
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M I I++ + R +I++ENIANA+ TP YR + I +F++ ++
Sbjct: 1 MDLIKSLFISASGLRAQNGRMRIIAENIANANSTAKTPEELPYR-RKIPTFKSHFDREMG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ E ++ A +Q + NT+ E + YE N
Sbjct: 60 ADMVELGKIAEDNTDFRSVLMPGHPAADANGYVLQPNVNTLI---ETTDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 117 LNVIDSTRKMLQRTI 131
>gi|304397202|ref|ZP_07379081.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
gi|304355351|gb|EFM19719.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
Length = 134
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVV-FQTDAAPGSAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + +E + Y+ N
Sbjct: 60 GGVKVAKIVDDPTPAKLVYDPGNPMADAKGYVKMPN---VDVVSESVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM+M +
Sbjct: 117 EVLNTVKSMMMKTLT 131
>gi|317051987|ref|YP_004113103.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
gi|316947071|gb|ADU66547.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
Length = 129
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ RQ + N+AN +T ++++ + + E + + +
Sbjct: 2 VDAFYNAASAIKTYGFRQSASAHNVANVNTDGFKSQRVDTAEGVSGGVRPTGVSIDKSHG 61
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + A G+ NT IT E+ S +Y NT +I+ + M
Sbjct: 62 PFRPSEFPADTVSFSADAIAMAGLVEGSNT-DITREIVNSSVNQYSVSANTGVIRSQDEM 120
Query: 124 V 124
+
Sbjct: 121 I 121
>gi|332531616|ref|ZP_08407513.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
19624]
gi|332038979|gb|EGI75408.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
19624]
Length = 136
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 48/135 (35%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + ++R +V+ N+ANA P+ Y+A+ + ++
Sbjct: 1 MSMFSIFGVSGSAISAQAQRLNVVASNLANADAVAGPDGQFYKARQVVFETLPFDEATPG 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + + D V S V E+ Y+ N
Sbjct: 61 AAGVKINAVTESQAPARRTYEPTHPSADADGYVNQS--NVNPVEEMVNMISASRSYQNNV 118
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 119 EVMNTAKTLLLKTLQ 133
>gi|237731005|ref|ZP_04561486.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
gi|226906544|gb|EEH92462.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
Length = 134
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK + F+
Sbjct: 1 MALLNIFDIAGSALTAQSKRLNVAASNMANADSVSGPDGQPYRAKQVV-FQVDAAPGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ ES + + V + E+ + Y+ N
Sbjct: 60 GGVKVADVIESQAPDKLVYEPGNPLADANGYVKMPN---VDVVGEMVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + S+++ +
Sbjct: 117 EVLNTVKSLMLKTLT 131
>gi|144900468|emb|CAM77332.1| Flagellar basal-body rod protein FlgC [Magnetospirillum
gryphiswaldense MSR-1]
Length = 137
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHET 60
+IA SER +++SEN+ANA TP+ Y+ + + +F++ L++
Sbjct: 9 KIAISGMKAQSERLRVISENLANADSLARTPDGTPYK-RKVVTFKSELDRANGYTGVKVD 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
++ S A + + V E+ + YE N +I
Sbjct: 68 KVRPDASEFQRRYDPKHPAADRDGYVLAPN---VNPLIEMMDMREAQRSYEANMNVINSS 124
Query: 121 NSMVMHVV 128
++ V
Sbjct: 125 RQLLSRTV 132
>gi|300936123|ref|ZP_07151062.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
gi|300458701|gb|EFK22194.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
Length = 143
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + L+
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARS-PVFAAVYHHSLLV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
TH + + + N V + ++
Sbjct: 60 G-THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|134095099|ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans]
gi|133739002|emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
protein) [Herminiimonas arsenicoxydans]
Length = 134
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 18/139 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN------ASTPNYRAKDISSFETILNQNFLM 54
M F +A + S+R +VS NIAN A YRAK + Q+ M
Sbjct: 1 MSLFNIFNVAGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEF------QSVPM 54
Query: 55 ARTHETHLK----ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
A T +K D+S L D+T V + V + E+ Y
Sbjct: 55 AGATSTGVKVRQVVEDASPLKMVFDPKHPNADETGHVAMP--NVNVVEEMVNMISASRSY 112
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+ N + + +M++ +
Sbjct: 113 QTNVETMNAAKTMLLKTLT 131
>gi|115353120|ref|YP_774959.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria AMMD]
gi|170703094|ref|ZP_02893914.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
IOP40-10]
gi|171321836|ref|ZP_02910737.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
MEX-5]
gi|172061974|ref|YP_001809626.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria
MC40-6]
gi|115283108|gb|ABI88625.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria AMMD]
gi|170131991|gb|EDT00499.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
IOP40-10]
gi|171092874|gb|EDT38126.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
MEX-5]
gi|171994491|gb|ACB65410.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
MC40-6]
Length = 141
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPANPSADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|312876494|ref|ZP_07736477.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796705|gb|EFR13051.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
lactoaceticus 6A]
Length = 147
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 42/145 (28%), Gaps = 21/145 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI------SSFETIL 48
M I+S R ++++NIANA+T YR K + SF IL
Sbjct: 1 MGMFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEERKQSFSDIL 60
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYK 102
NQ A+ + T N V I E+
Sbjct: 61 NQKIGQAQASS---YGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVN 117
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHV 127
YE N + SM+
Sbjct: 118 MIEASRSYEANVTALNITKSMITRT 142
>gi|323975932|gb|EGB71026.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
Length = 143
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDGASVQVQDVLQTGGALKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|241761153|ref|ZP_04759242.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374772|gb|EER64233.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 134
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANAST-PNYRAKDISSFETILNQNFL--MARTH 58
+P++ F I+ + + R + N+ANA++ + + + I + T
Sbjct: 3 RPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEAAFHPLKPIFSTVTQSPGIATV 62
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ + + S D+ V +G V E+ + Y+ N ++++
Sbjct: 63 KVNKVVATGSPPTQIHDPTHPLADENGDVWAAG--VDTAQEMVEMIETARDYQNNVQVMQ 120
Query: 119 KLNSMVMHVVR 129
S+ + ++
Sbjct: 121 TAKSLTLDTLK 131
>gi|78067839|ref|YP_370608.1| flagellar basal body rod protein FlgC [Burkholderia sp. 383]
gi|77968584|gb|ABB09964.1| Flagellar basal-body rod protein FlgC [Burkholderia sp. 383]
Length = 141
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPSNPAADSNGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|56551509|ref|YP_162348.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
mobilis ZM4]
gi|260752884|ref|YP_003225777.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|4378860|gb|AAD19728.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
ZM4]
gi|56543083|gb|AAV89237.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258552247|gb|ACV75193.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 134
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 5/131 (3%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANAST-PNYRAKDISSFETILNQNFL--MARTH 58
+P++ F I+ + + R + N+ANA++ + + + I + T
Sbjct: 3 RPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEAAFHPLKPIFSTVTQSPGIATV 62
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ + S D+ V +G V E+ + Y+ N ++++
Sbjct: 63 KVDKVVATGSPPTQIHDPTHPLADENGDVWAAG--VDTAQEMVEMIETARDYQNNVQVMQ 120
Query: 119 KLNSMVMHVVR 129
S+ + ++
Sbjct: 121 TAKSLTLDTLK 131
>gi|126462486|ref|YP_001043600.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
17029]
gi|126104150|gb|ABN76828.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
17029]
Length = 138
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRA----KDISS-FETILNQNFLMARTHE 59
+ F + ++ + R V+ N+ANA T + +A + + FET
Sbjct: 6 SVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLST 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T + S V V + E+ + Y+ + +
Sbjct: 66 TDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVST 125
Query: 120 LNSMV 124
L S++
Sbjct: 126 LRSLM 130
>gi|269138580|ref|YP_003295280.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
gi|267984240|gb|ACY84069.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
gi|304558590|gb|ADM41254.1| Flagellar basal-body rod protein FlgC [Edwardsiella tarda FL6-60]
Length = 134
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I+ S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MSLLSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVV-FQVKPGAGEEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + + V + E+ S Y+ N
Sbjct: 60 GGVQVSQVVDDPAPDRLVYQPGNPLADAKGYVRMPN---VDVVGEMVNSIAASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++M +
Sbjct: 117 EVLNTTKSLMMKTLT 131
>gi|306813306|ref|ZP_07447499.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
gi|305854069|gb|EFM54508.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
Length = 143
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
+ TH + + + N V + ++
Sbjct: 59 SGTHRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|145298489|ref|YP_001141330.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851261|gb|ABO89582.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 139
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 14/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA + S R V+ N+ANA + + Y A+ F L+Q
Sbjct: 1 MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARR-PIFAAQLDQAMSD 59
Query: 55 ARTHET----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
++ + ES + L D + + V + E+ + Y
Sbjct: 60 KQSSVGVEVKGIVESKAPLLKEYNPNHPMADDDGYIFKPN---VNMVEEMADMINASRSY 116
Query: 111 ELNTKLIKKLNSMVMHVV 128
+ N ++ M+ +
Sbjct: 117 QTNVQVADSAKKMLQQTL 134
>gi|107023955|ref|YP_622282.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia AU
1054]
gi|116691042|ref|YP_836665.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
HI2424]
gi|170734376|ref|YP_001766323.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
MC0-3]
gi|206558966|ref|YP_002229726.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
J2315]
gi|105894144|gb|ABF77309.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia AU
1054]
gi|116649131|gb|ABK09772.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
HI2424]
gi|169817618|gb|ACA92201.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
MC0-3]
gi|198035003|emb|CAR50875.1| flagellar basal-body rod protein FlgC (putative proximal rod
protein) [Burkholderia cenocepacia J2315]
Length = 141
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA + Y+AK + + +
Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D S + D VQ+ V E+ Y+ N
Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|85058009|ref|YP_453711.1| flagellar basal body rod protein FlgC [Sodalis glossinidius str.
'morsitans']
gi|84778529|dbj|BAE73306.1| flagellar basal-body rod protein FlgC [Sodalis glossinidius str.
'morsitans']
Length = 134
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MSLFSIFDISGSALMAQSQRLNVSASNMANADSVTGPDGEPYRAKQVV-FQLDAALGQPV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + E + D+ + N V E+ + Y+ N
Sbjct: 60 GGVRVSQVVEDPAPWRLVYDPGHPLANDRGYIRMPNVNRVA---EMVNTLSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
++I SM+M +
Sbjct: 117 EVINSARSMMMKTL 130
>gi|77463654|ref|YP_353158.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
2.4.1]
gi|77388072|gb|ABA79257.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
2.4.1]
Length = 138
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRA----KDISS-FETILNQNFLMARTHE 59
+ F + ++ + R V+ N+ANA T + +A + + FET
Sbjct: 6 SVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLST 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T + S V V + E+ + Y+ + +
Sbjct: 66 TDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVST 125
Query: 120 LNSMV 124
L S++
Sbjct: 126 LRSLM 130
>gi|330830305|ref|YP_004393257.1| flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
gi|328805441|gb|AEB50640.1| Flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
Length = 139
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFL- 53
M F IA + S R V+ N+ANA + + Y A+ F L+Q
Sbjct: 1 MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARR-PVFAAQLDQAMSD 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ +K S + V + E+ + Y+ N
Sbjct: 60 KQGSVGVEVKGIVESKAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M+ ++
Sbjct: 120 VQVADSAKKMLQQTLQ 135
>gi|256020226|ref|ZP_05434091.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
gi|300817272|ref|ZP_07097490.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
gi|307313521|ref|ZP_07593142.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
gi|332281388|ref|ZP_08393801.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
gi|300530248|gb|EFK51310.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
gi|306906689|gb|EFN37200.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
gi|315059540|gb|ADT73867.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli W]
gi|323379901|gb|ADX52169.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
gi|332103740|gb|EGJ07086.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
Length = 143
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA+ P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDSASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|229544391|ref|ZP_04433449.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
gi|229324876|gb|EEN90553.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
Length = 149
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 45/145 (31%), Gaps = 17/145 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M T I+S+ + R ++S NIANA T YR K++ SF
Sbjct: 1 MSMFTGMNISSEALSAQRLRMDVISSNIANADTTRDTYVNGKWQPYRRKEVVLAAGGGSF 60
Query: 45 ETILNQNFLMART-HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
+I M + + D V+ V + E+
Sbjct: 61 ASIFRSKLGMQGAGSGVQVAGIVEDNSDFKKEYNPDDPDADANGYVTKPNVDLLTEMTGM 120
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + +M+M +
Sbjct: 121 ISATRSYEANVTALNASKAMLMKTL 145
>gi|121596115|ref|YP_988011.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
gi|222112270|ref|YP_002554534.1| flagellar basal-body rod protein flgc [Acidovorax ebreus TPSY]
gi|120608195|gb|ABM43935.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
gi|221731714|gb|ACM34534.1| flagellar basal-body rod protein FlgC [Acidovorax ebreus TPSY]
Length = 134
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+AN P+ Y+A+ + F+T
Sbjct: 1 MSMFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVV-FQTAPMGPESA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + ++ESD G + + + N V E+ Y+ N
Sbjct: 60 AGVRVSSIQESDQPGRRVHDPANPMADAEGYVTHSNVNAV---EEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 117 EVMNTAKTLLLKTLQ 131
>gi|71280491|ref|YP_268220.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
34H]
gi|71146231|gb|AAZ26704.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
34H]
Length = 143
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F I + S R + NIANA + + YRA+ +
Sbjct: 1 MSLFNVFDITGSGMSAQSVRLNTTASNIANADSVSSSADKTYRARHPVFAAAMQEAAAGQ 60
Query: 55 ARTHETHLK----ESDSSGLHWNAHVIEA-PLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
++ + + S N + P+ G N V + E+
Sbjct: 61 GKSDGSGVGVNVLGIVESDKPLNVEYAPSHPMADKDGYIYKPN-VNVIEEMTNMISASRS 119
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N +L + +M+ ++
Sbjct: 120 YQTNVQLAESAKNMLNKTLQ 139
>gi|284007175|emb|CBA72461.1| flagellar basal body rod protein FlgC [Arsenophonus nasoniae]
Length = 135
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+S + S+R + + N+ANA + PN YRAK + + L+ N +
Sbjct: 2 MSLFSIFEISSSALSAQSQRLNVSASNMANADSVTGPNGEPYRAKQVVFSVSELSANGIG 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + D S DQ ++ V +T E+ Y+ N
Sbjct: 62 GVSVAQVVD--DPSPFRLEYQPAHPLADQRGYIRKP--NVDVTAEMINPISASRSYQANI 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++ +
Sbjct: 118 EVMNTTKSLMQKTLT 132
>gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans
BC]
gi|330826753|ref|YP_004390056.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
K601]
gi|317119098|gb|ADV01587.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
BC]
gi|329312125|gb|AEB86540.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
K601]
Length = 134
Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+AN P+ Y+A+ + F+T
Sbjct: 1 MSMFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVV-FQTAPMGPDSS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + ++ES G + + + N V E+ Y+ N
Sbjct: 60 AGVRVSTIQESGVPGRRVHDPSNPMADAEGYVTHSNVNAV---EEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVMNTAKSLLLKTLQ 131
>gi|221639497|ref|YP_002525759.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131]
gi|221160278|gb|ACM01258.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131]
Length = 139
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRA----KDISS-FETILNQNFLMARTHE 59
+ F + ++ + R V+ N+ANA T + +A + + FET
Sbjct: 7 SVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLST 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T + S V V + E+ + Y+ + +
Sbjct: 67 TDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVST 126
Query: 120 LNSMV 124
L S++
Sbjct: 127 LRSLM 131
>gi|126175148|ref|YP_001051297.1| flagellar basal body rod protein FlgC [Shewanella baltica OS155]
gi|125998353|gb|ABN62428.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
Length = 138
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 6/134 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F +A + S R + NIANA + + YRA+ +
Sbjct: 1 MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMAKAQSQQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S + V + E+ Y++N
Sbjct: 61 QASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120
Query: 115 KLIKKLNSMVMHVV 128
++ + SM+ +
Sbjct: 121 QVAEAAKSMLQQTL 134
>gi|15596275|ref|NP_249769.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAO1]
gi|107100523|ref|ZP_01364441.1| hypothetical protein PaerPA_01001548 [Pseudomonas aeruginosa PACS2]
gi|116049007|ref|YP_792191.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152984084|ref|YP_001349652.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PA7]
gi|218892958|ref|YP_002441827.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
LESB58]
gi|254234214|ref|ZP_04927537.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
C3719]
gi|254239436|ref|ZP_04932758.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
gi|296390558|ref|ZP_06880033.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAb1]
gi|313106033|ref|ZP_07792292.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
39016]
gi|9946994|gb|AAG04467.1|AE004539_9 flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PAO1]
gi|115584228|gb|ABJ10243.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166145|gb|EAZ51656.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
C3719]
gi|126192814|gb|EAZ56877.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
gi|150959242|gb|ABR81267.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PA7]
gi|218773186|emb|CAW28998.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
LESB58]
gi|310878794|gb|EFQ37388.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
39016]
Length = 146
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 22/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + S R V+ NIANA T + YRA+ F T+ Q
Sbjct: 1 MSLASVFNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRARH-PVFSTMFQQA--- 56
Query: 55 ARTHETHLKESDSSGLHWNA------HVIEAPLDQTTGVQVSGN------TVGITNELYK 102
+ + DSSG P + N V + E+
Sbjct: 57 QGDSGSLFADQDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGYVYYPNVNVVEEMAD 116
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ M+ V+
Sbjct: 117 MISASRAFQTNAEMMNTAKQMMQKVLT 143
>gi|218133658|ref|ZP_03462462.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
43243]
gi|217991033|gb|EEC57039.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
43243]
Length = 149
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 23/142 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSF--ETILNQNFLMARTHETHLKE 64
F IAS R ++SENIAN +T R D + + + + + H+ E
Sbjct: 7 FNIASSGMTAQRLRTDVISENIANVNTT--RTSDGTPYVRKEVYFTEKGKSVQSFEHVFE 64
Query: 65 SDSSGLHWNAHVIEAPLDQTTG----------VQVSGN------TVGITNELYKSGHIKY 108
+ +G+ N + + L+ T N V + E+
Sbjct: 65 AARNGIAGNGVKVTSILEDNTTDMVKKYDPSHPDADENGYVTYPNVNVVQEMTDLIDATR 124
Query: 109 LYELNTKLIKKLNSMVMHVVRG 130
YE N SM +G
Sbjct: 125 SYEANVTAFNAGKSM---ATKG 143
>gi|323495379|ref|ZP_08100456.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
20546]
gi|323310302|gb|EGA63489.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
20546]
Length = 138
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + S NA + V + E+ Y+ N
Sbjct: 61 DHTVPVKVLGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
+L M++ ++
Sbjct: 121 QLADASKQMLLRTLQ 135
>gi|120613057|ref|YP_972735.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
gi|120591521|gb|ABM34961.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
Length = 134
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + ++R +V+ N+AN P+ Y+A+ + F+T
Sbjct: 1 MSMFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVV-FQTAPMGGEGA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + ES + G D V S V E+ Y+ N
Sbjct: 60 AGVRVSAISESQAPGKRV-LDPTHPQADAEGYVTHS--NVNPVEEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVLNTTKSLLLKTLQ 131
>gi|90411003|ref|ZP_01219017.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
gi|90328216|gb|EAS44527.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
Length = 138
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA++ + Y+A+ + + ++
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYQR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + +K S A + V + E+ Y+ N
Sbjct: 61 AESVPVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M+M ++
Sbjct: 121 QVADASKQMLMSTLQ 135
>gi|293408365|ref|ZP_06652204.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
gi|291471543|gb|EFF14026.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
Length = 143
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTLRLNTVASNLANAEAPAGSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAMDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|328545507|ref|YP_004305616.1| flagellar basal-body rod protein FlgC [polymorphum gilvum
SL003B-26A1]
gi|326415248|gb|ADZ72311.1| Flagellar basal-body rod protein FlgC [Polymorphum gilvum
SL003B-26A1]
Length = 138
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYR------AKDISSFETILNQNFLMARTHET 60
+I++ SER ++VSEN+ANA + A+ +FE+ ++ +
Sbjct: 9 LKISASGLQAQSERLRVVSENLANAQSTGKTKGADPYARKTITFESEFDRATAASMVKVK 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D + D V++ V + E+ YE N K++ +
Sbjct: 69 DI-GKDKAPFTIEYDPGHPAADDDGYVKLP--NVNLLVEMADMRETNRSYEANLKMMTQA 125
Query: 121 NSMVMHVV 128
+MVM +
Sbjct: 126 RTMVMRTI 133
>gi|68164548|gb|AAY87277.1| predicted flagellar proximal rod protein [uncultured bacterium
BAC17H8]
Length = 138
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 7/130 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA-STPN-----YRAKDISSFETILNQNFLMARTH 58
F +AS+ + R ++ N+ANA + YRA F+T N +
Sbjct: 6 NIFDVASRSMSAQLVRLNTIASNLANAGNISGSEDQAYRAMK-PIFKTTYAANVKDSGIS 64
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
T + +S + V V + E + K Y+ N +++
Sbjct: 65 TTEVAGITTSERRPERIYMPNHPLSDQDGFVYAAAVNVEEEFVEMLEAKRQYQNNVEVVT 124
Query: 119 KLNSMVMHVV 128
L +++M +
Sbjct: 125 TLRALMMRTI 134
>gi|54308095|ref|YP_129115.1| flagellar basal body rod protein FlgC [Photobacterium profundum
SS9]
gi|46912521|emb|CAG19313.1| Putative flagellar basal body rod protein FlgC [Photobacterium
profundum SS9]
Length = 138
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA++ + YRA+ + + ++
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYRARHPIFAAALNSASYQR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + +K S A + V + E+ Y+ N
Sbjct: 61 AESVPVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M+M ++
Sbjct: 121 QVADASKQMLMSTLQ 135
>gi|302872573|ref|YP_003841209.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
obsidiansis OB47]
gi|302575432|gb|ADL43223.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
obsidiansis OB47]
Length = 145
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 41/136 (30%), Gaps = 17/136 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETH 61
I+S R ++++NIANA+T YR + I FE +
Sbjct: 6 NISSSALTAQRVRMDVIAQNIANANTTRTESGQPYR-RKIVVFEERKQSFADILTQKIGE 64
Query: 62 LKESDSSGLHWNAHVIEAPL----DQTTGVQVSGN------TVGITNELYKSGHIKYLYE 111
S G+ A + + T N V I E+ YE
Sbjct: 65 AANSYYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 124
Query: 112 LNTKLIKKLNSMVMHV 127
N + SM+
Sbjct: 125 ANVTALNITKSMITRT 140
>gi|238927420|ref|ZP_04659180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
gi|238884702|gb|EEQ48340.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
Length = 151
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTP------NYRAKDISS----------FETILNQN 51
A+ R ++S NIANA+T Y + + FE+ L +
Sbjct: 8 DAAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGTGIGFESFLARA 67
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
R + S + V E D V V I E+ Y
Sbjct: 68 SNRLRPGDGVRAVSIQADNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDMISASRGY 127
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E NT I SMV +R
Sbjct: 128 EANTTTINAAKSMVSAALR 146
>gi|289670504|ref|ZP_06491579.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 135
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/135 (8%), Positives = 41/135 (30%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + ++ +
Sbjct: 1 MSNLPIFDVAGSALHAHSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRRDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPD---VDPVSQMVNMISTSRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|157362949|ref|YP_001469716.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
gi|157313553|gb|ABV32652.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
Length = 137
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 45/136 (33%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +++ R I+S NIAN+ T YR + + F L +
Sbjct: 1 MNEFLIMNVSASGMTAQRLRVDIISSNIANSETTRTDRGTPYRRR-VPVFSEYLISDGKS 59
Query: 55 ARTHETHLK-ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
A T ++ E D S D+ V + V + E+ + YE N
Sbjct: 60 ASTGVKVVRIEEDPSPFRLVYDPSHPDADENGYVSLP--NVNVLREMVDLISAQRSYEAN 117
Query: 114 TKLIKKLNSMVMHVVR 129
SM+ ++
Sbjct: 118 ISAFNTTKSMINSALQ 133
>gi|186477695|ref|YP_001859165.1| flagellar basal body rod protein FlgC [Burkholderia phymatum
STM815]
gi|184194154|gb|ACC72119.1| flagellar basal-body rod protein FlgC [Burkholderia phymatum
STM815]
Length = 141
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA T Y+AK + + +
Sbjct: 5 MNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGARTGSGQ 64
Query: 58 HETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + D + + + D VQ+ V E+ Y+ N
Sbjct: 65 QVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +++ +
Sbjct: 123 VETLNTAKQLMLKTLT 138
>gi|117621411|ref|YP_857345.1| flagellar basal body rod protein FlgC [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562818|gb|ABK39766.1| flagellar basal-body rod protein FlgC [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 139
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 14/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA + S R V+ N+ANA + + Y A+ F L+Q
Sbjct: 1 MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARR-PIFAAQLDQAMSD 59
Query: 55 ARTHET----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ + ES++ L + + V + E+ + Y
Sbjct: 60 KQASAGVEVKGIVESEAPLLKEYNPNHPMADKDGFIFKPN---VNMVEEMADMINASRSY 116
Query: 111 ELNTKLIKKLNSMVMHVV 128
+ N ++ M+ +
Sbjct: 117 QTNVQVADSAKKMLQQTL 134
>gi|300311350|ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
gi|300074135|gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
Length = 134
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 24/142 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-------TPNYRAKDISSFETILNQNFL 53
M F +A + S+R + NIANA TP Y+AK + Q
Sbjct: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTP-YKAKQVVF------QAIP 53
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIK 107
+ ++ +K + ++ P GN V E+
Sbjct: 54 VGGVKDSGVKVAAVVEDQAPPKLVYDPKHP----MADGNGYVAMPNVNPVEEMVNMISAS 109
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
Y+ N + + +M++ +
Sbjct: 110 RAYQTNVETMNTAKAMLVKTLT 131
>gi|297538894|ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
gi|297258241|gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
Length = 135
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 12/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-------TPNYRAKDISSFETILNQNFL 53
M F I+ + ++R V+ N+ANA TP Y+AK + T
Sbjct: 1 MSLFNVFNISGSAMSAQAQRLNTVASNLANADSATSANGTP-YKAKQVVFSAT---PTGS 56
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ LK + + + + PL G N V +T E+ Y+ N
Sbjct: 57 PDASGVKVLKVIEDNSPAKVVYDPKHPLANDKGYVTMPN-VNVTEEMVNMISASRAYQNN 115
Query: 114 TKLIKKLNSMVMHVVR 129
+ + +M++ +
Sbjct: 116 VETMNAAKTMLLKTLT 131
>gi|206890290|ref|YP_002248113.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742228|gb|ACI21285.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 135
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 24/141 (17%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANAS---TPN---YRAKDISSFETILNQNFL 53
M+ I ++++ R +++ N+AN + TP YR KD+ + +Q
Sbjct: 1 MKDIFLPLKVSATGLEAQKIRLNVIASNLANINSTKTPEGGPYRRKDVLFTTYMYDQ--- 57
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIK 107
+ + + + + N V E+
Sbjct: 58 --------ISQGVDVQRIVEDQRPFRIVYEPSHPDADKNGYVKYPNVNPMEEMINLISAS 109
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
YE N +I M M +
Sbjct: 110 RAYEANLTMINSYKDMFMRTL 130
>gi|146277710|ref|YP_001167869.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
17025]
gi|145555951|gb|ABP70564.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
17025]
Length = 138
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA----STPNYRAKDISS-FETILNQNFLMARTHE 59
F + ++ + R V+ N+ANA T + + FET +
Sbjct: 6 NIFDVGARALSAQMVRMNTVASNLANAGTVSDTAETAFRPLRPVFETTYADAVGKSGLST 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T + S V V + E+ + Y+ + +
Sbjct: 66 TDVAAVVSLDREPARTYRPDHPQADAEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVST 125
Query: 120 LNSMV 124
L S++
Sbjct: 126 LRSLM 130
>gi|268589984|ref|ZP_06124205.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
1131]
gi|291314702|gb|EFE55155.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
1131]
Length = 134
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I++ S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MALLSIFDISASALTAQSQRLNVSASNMANAESIAGPDGQPYRAKQVV-FQMAPQGRHEV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ L E + + ++ + V + E+ + Y+ N
Sbjct: 60 GGVRVSELIEDPTPPRMEYKPGHPSADEKGYVQMPN---VDMVGEMINTISASRSYQANL 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +
Sbjct: 117 EVMNTAKTLLQKTLT 131
>gi|91792662|ref|YP_562313.1| flagellar basal body rod protein FlgC [Shewanella denitrificans
OS217]
gi|91714664|gb|ABE54590.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
OS217]
Length = 138
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQN-FL 53
M F ++ S R + NIANA + + YRA+ FE LN+
Sbjct: 1 MSLFNIFDVSGSGMAAQSIRLNTTASNIANADSVSSSVDKTYRARH-PIFEAELNKAHDQ 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
T ++ S + + V + E+ Y++N
Sbjct: 60 QNGTKGVQVRAIVESDKPLLKEYSPSHPMADGDGFIYKPNVNVMEEMADMISASRSYQMN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ +M+ +R
Sbjct: 120 VQVADATKTMLQQTLR 135
>gi|217976223|ref|YP_002360370.1| flagellar basal body rod protein FlgC [Methylocella silvestris BL2]
gi|217501599|gb|ACK49008.1| flagellar basal-body rod protein FlgC [Methylocella silvestris BL2]
Length = 140
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFLMARTHE 59
++A S R +IVSEN+ANA STP Y A+ +F + L++ +
Sbjct: 9 LRVAGSGLEAQSARLRIVSENLANAQSTGSTPGADPY-ARKTITFASELDRASGVDLVRV 67
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ + A + + V + E+ YE N +++K+
Sbjct: 68 KGIGADKAPFRVEQDPGNPAADSKGFVKLPN---VNVIMEMADMREANRSYEANLQIVKQ 124
Query: 120 LNSMVMHVV 128
+ V
Sbjct: 125 TRELSSMTV 133
>gi|114570487|ref|YP_757167.1| flagellar basal body rod protein FlgC [Maricaulis maris MCS10]
gi|114340949|gb|ABI66229.1| flagellar basal-body rod protein FlgC [Maricaulis maris MCS10]
Length = 137
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 9/122 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLMARTHETH 61
QI++ + R +I+SENIANA + A + + FE L++ + T
Sbjct: 9 QISAFGMRAQAARMRIISENIANADSTAREAGGDPYRRQVPVFEAELDRATGLNAVRMTD 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ D S + VQ S V E+ YE N +I+
Sbjct: 69 VAH-DQSEFTLEYDPGHPAANAEGYVQYS--NVQTLVEMMDMREAMRSYEANLNMIENAR 125
Query: 122 SM 123
M
Sbjct: 126 RM 127
>gi|326319095|ref|YP_004236767.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375931|gb|ADX48200.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 134
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + ++R +V+ N+AN P+ Y+A+ + F+T +
Sbjct: 1 MSMFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVV-FQTAPMGDEGA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + ES + G D V S V E+ Y+ N
Sbjct: 60 AGVRVSAISESQAPGKRV-LDPTHPQADAEGYVTHS--NVNPVEEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVLNTTKSLLLKTLQ 131
>gi|217972596|ref|YP_002357347.1| flagellar basal body rod protein FlgC [Shewanella baltica OS223]
gi|304409980|ref|ZP_07391599.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
gi|307302307|ref|ZP_07582065.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
gi|217497731|gb|ACK45924.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS223]
gi|304351389|gb|EFM15788.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
gi|306914345|gb|EFN44766.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
Length = 138
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 6/134 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F +A + S R + NIANA + + YR++ +
Sbjct: 1 MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S + V + E+ Y++N
Sbjct: 61 QASQGVAVKGIVESDRPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120
Query: 115 KLIKKLNSMVMHVV 128
++ + SM+ +
Sbjct: 121 QVAEAAKSMLQQTL 134
>gi|301646811|ref|ZP_07246663.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
gi|307136856|ref|ZP_07496212.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
gi|331640711|ref|ZP_08341858.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
gi|301075004|gb|EFK89810.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
gi|315616829|gb|EFU97446.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
gi|331040085|gb|EGI12293.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
Length = 143
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA P Y+A+ F + + + +
Sbjct: 1 MSFTDIYQISGSAMTAQTIRLNTVASNLANAEAPAGSEAQAYKARS-PVFAAVYHHSL-L 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A TH + + + N V + ++
Sbjct: 59 AGTHRHAIDAASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 119 DFETNVDVLNNVKSMQQSLLK 139
>gi|254255085|ref|ZP_04948402.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
gi|124899730|gb|EAY71573.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
Length = 133
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 11/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-----YRAKDISSFETILNQNFLMA 55
M QIA + R ++ N+ANA T YRA+ + + +
Sbjct: 2 MSFKDISQIAGSAMAAQTVRLDTIASNLANADTAGTEGTAYRAR-----KPVFAAVYEGH 56
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
L + + +PL G+ N V E+ + N +
Sbjct: 57 GARVQVLDVIELDDPPAAKYEPGSPLADENGMVYYSN-VSAVEEMTDMMAASRAFSTNAE 115
Query: 116 LIKKLNSMVMHVVR 129
++ ++ +M ++R
Sbjct: 116 VLSRVKAMQQDLLR 129
>gi|254473329|ref|ZP_05086726.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
gi|211957445|gb|EEA92648.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
Length = 139
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 19/136 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFLMAR 56
+ +I+S S+R +IVSEN+AN TP Y+ K I+ F++ +++
Sbjct: 6 VASLKISSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTIT-FKSEVDRAL---- 60
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYEL 112
+L + G + +E +GN V EL YE
Sbjct: 61 --GANLVAVKNIGSDKGDYRVEFDPSHPAA-DENGNVKYPNVNTLIELADMREASRSYEA 117
Query: 113 NTKLIKKLNSMVMHVV 128
+++ K M+ +
Sbjct: 118 GLQMMVKSREMITRTI 133
>gi|315648139|ref|ZP_07901240.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
gi|315276785|gb|EFU40128.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
Length = 149
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 47/147 (31%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDISSFETILNQ 50
M F I + R ++S NIANA T YR K + F+
Sbjct: 1 MNISNSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVV-FQPQQES 59
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGNT--------VGITNELY 101
+ R + +++ +APL + NT V IT E+
Sbjct: 60 FEGLLRAQMSG-QDAGQGVKVAAVQEDQAPLKRVYNPTHPDANTEGYVFMPNVDITKEMV 118
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N I +M+M +
Sbjct: 119 DMLAATRSYEANVTAINASKAMIMKAL 145
>gi|332558510|ref|ZP_08412832.1| FlgC [Rhodobacter sphaeroides WS8N]
gi|332276222|gb|EGJ21537.1| FlgC [Rhodobacter sphaeroides WS8N]
Length = 138
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRA----KDISS-FETILNQNFLMARTHE 59
+ F + ++ + R V+ N+ANA T + RA + + FET
Sbjct: 6 SVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGRTGLST 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T + S V V + E+ + Y+ + +
Sbjct: 66 TDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVST 125
Query: 120 LNSMV 124
L S++
Sbjct: 126 LRSLM 130
>gi|319787123|ref|YP_004146598.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
11-1]
gi|317465635|gb|ADV27367.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
11-1]
Length = 135
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 39/134 (29%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN--YRAKDISSFETILNQNFLM 54
M + F +A S R ++ N+ANA +P Y+ + + +
Sbjct: 1 MSNLPIFDVAGSALQAQSVRLSTIASNLANADAVAGSPEAVYKPLEPVFQAQASGSDPAL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +SD+ + V +++ Y+
Sbjct: 61 TGVRVREIAQSDAPPVRRYEPGHPLADADGYVFAPD---VDPVSQMVNMISASRSYQAGV 117
Query: 115 KLIKKLNSMVMHVV 128
++I + + +
Sbjct: 118 EIINTAKELAIATL 131
>gi|78357998|ref|YP_389447.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220403|gb|ABB39752.1| flagellar basal-body rod protein, putative [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 125
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
Q N S RQ + ++NIANAST +R++++ +Q +A ++
Sbjct: 8 QALNAFSMRQAVTADNIANASTDGFRSREVVLETGPQDQGVQVADIRRRQESQAMDELRR 67
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
A E Q + E + YE N I+ + M
Sbjct: 68 EQALNAETHGAQEPAAPSD---TDLVRESVTMMENQRAYEANAAAIRAQDEM 116
>gi|304438470|ref|ZP_07398410.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304368553|gb|EFM22238.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 151
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 17/139 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTP------NYRAKDISS----------FETILNQN 51
A+ R ++S NIANA+T Y + + FE+ L +
Sbjct: 8 DTAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGHGIGFESFLARA 67
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
R + + V E D V V I E+ Y
Sbjct: 68 SNRMRPGDGVRAVGIRTDNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDMISASRGY 127
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E NT I SMV +R
Sbjct: 128 EANTTTINAAKSMVNAALR 146
>gi|254499116|ref|ZP_05111806.1| putative flagellar basal-body rod protein FlgB [Legionella
drancourtii LLAP12]
gi|254351655|gb|EET10500.1| putative flagellar basal-body rod protein FlgB [Legionella
drancourtii LLAP12]
Length = 112
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M Q+ S + RQ ++ N+AN +TP Y+ ++ +FE LN+N
Sbjct: 1 MNSDATIQLISLALDATLMRQTAIANNVANINTPGYQTLEV-NFEQQLNEN--------- 50
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
HL S++S L + Q+T I ++ + Y K + +
Sbjct: 51 HLS-SEASDLAIIPPHYQLSDHQST----------IDEQMTLNVQNMTHYRALVKGLNQK 99
Query: 121 NSMVMHVVRG 130
+++ ++G
Sbjct: 100 LAIMKLALQG 109
>gi|117919770|ref|YP_868962.1| flagellar basal body rod protein FlgC [Shewanella sp. ANA-3]
gi|117612102|gb|ABK47556.1| flagellar basal-body rod protein FlgC [Shewanella sp. ANA-3]
Length = 138
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + + YR++ FE + +
Sbjct: 1 MSLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRH-PIFEAEMAKAQSQ 59
Query: 55 ARTHETHL--KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + +S + + P+ G N V + E+ Y++
Sbjct: 60 QQASQGVTVKGIVESDKPLLKEYSPDHPMADADGFIYKPN-VNVMEEMADMISASRSYQM 118
Query: 113 NTKLIKKLNSMVMHVV 128
N ++ + SM+ +
Sbjct: 119 NVQVAEAAKSMLQQTL 134
>gi|254499115|ref|ZP_05111805.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
LLAP12]
gi|254351654|gb|EET10499.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
LLAP12]
Length = 140
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN------ASTPNYRAKDI----SSFETILNQ 50
M + IASQ N R +V+ NIAN A ++A + SF ++++
Sbjct: 1 MNYAQIYAIASQGMNAEKLRVDVVANNIANQHSLQKADGSLFQASQVVTTAKSFAELVDK 60
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
M + E+ + A D+ V G V +E+ Y
Sbjct: 61 PQEMGIDSVEVVPENLPPSKVYQPGHPAA--DKQGYVNYPG--VSTIDEMTTLLRASRAY 116
Query: 111 ELNTKLIKKLNSMVMHVV 128
E N K+I +S+ + +
Sbjct: 117 EANIKIINSAHSLYLQAL 134
>gi|24374760|ref|NP_718803.1| flagellar basal body rod protein FlgC [Shewanella oneidensis MR-1]
gi|24349426|gb|AAN56247.1|AE015762_4 flagellar basal-body rod protein FlgC [Shewanella oneidensis MR-1]
Length = 138
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 6/134 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R + NIANA + + YR++ +
Sbjct: 1 MGLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S + V + E+ Y++N
Sbjct: 61 QASQGVAVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNV 120
Query: 115 KLIKKLNSMVMHVV 128
++ + SM+ +
Sbjct: 121 QVAEAAKSMLQQTL 134
>gi|260774936|ref|ZP_05883837.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609191|gb|EEX35349.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
BAA-450]
Length = 138
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGR 60
Query: 55 ARTHETHLKESDSSGLHWNAHV-IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
T + S +A E PL G N V + E+ Y+ N
Sbjct: 61 DHTVPVQVLGIVESDKPLDAEYNPEHPLANDDGYIYKPN-VNVMEEMANMISASRSYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 VQVADASKQMLLRTLQ 135
>gi|311992325|gb|ADQ26736.1| proximal rod protein [Aeromonas hydrophila]
Length = 138
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 14/133 (10%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHE 59
F IA + S R V+ N+ANA + + Y A+ F L+Q +
Sbjct: 5 VFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARR-PIFAAQLDQAMSDKQASA 63
Query: 60 T----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ ES++ L + + V + E+ + Y+ N +
Sbjct: 64 GVEVKGIVESEAPLLKEYNPNHPMADKDGFIFKPN---VNMVEEMADMINASRSYQTNVQ 120
Query: 116 LIKKLNSMVMHVV 128
+ M+ +
Sbjct: 121 VADSAKKMLQQTL 133
>gi|238919257|ref|YP_002932772.1| flagellar basal-body rod protein FlgC, [Edwardsiella ictaluri
93-146]
gi|238868826|gb|ACR68537.1| flagellar basal-body rod protein FlgC, putative [Edwardsiella
ictaluri 93-146]
Length = 134
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I+ SER + + N+ANA + P+ Y AK + F+ +
Sbjct: 1 MALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVV-FQVNPAAGEEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + E + + + V + +E+ S Y+ N
Sbjct: 60 GGVRVSQIVEDPAPERLVYQPGNPLADAKGYVRMPN---VDVVSEMVNSIAASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++M +
Sbjct: 117 EVLNTTKSLMMKTLT 131
>gi|23009956|ref|ZP_00050814.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
magnetotacticum MS-1]
Length = 136
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + IA+ S R +I++ENIANA T YR + + +F + ++
Sbjct: 1 MDFMKSLGIAASGLKAQSGRMRIIAENIANADSTAKTAGGEPYR-RKVPTFASRFDRELD 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ D S D V++ V E + YE N
Sbjct: 60 AKVIEAGRIAR-DPSPFRTKYDPGNPAADARGEVRLP--NVNGLIENMDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
++ M+ +
Sbjct: 117 LNMVTATRRMISRTL 131
>gi|319405399|emb|CBI79018.1| Flagellar basal-body rod protein flgC [Bartonella sp. AR 15-3]
Length = 138
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
QIA+ + S R ++++EN+AN ++ Y+ K + SFE ILN H T
Sbjct: 10 QIATTGLSAQSTRLRVIAENLANVNSTGKSAGARPYQRKTV-SFEAILNPYLDAQGVHVT 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ +D + D V+ V E+ YE N ++I++
Sbjct: 69 RIS-TDKAPFIMRYEPGHLAADSNGYVKYP--NVNSIIEMADMREANRSYEANLQVIRQA 125
Query: 121 NSMVMHVV 128
+V +
Sbjct: 126 RDLVSQTI 133
>gi|313673746|ref|YP_004051857.1| flagellar basal-body rod protein flgc [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940502|gb|ADR19694.1| flagellar basal-body rod protein FlgC [Calditerrivibrio
nitroreducens DSM 19672]
Length = 134
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +A+ + R ++S N+ANA+T Y+ KD+ F+ +L +
Sbjct: 1 MGFFNILNVAATGLSAQRIRINVISSNLANANTTKTETGEPYKRKDVV-FKELLEGEYTG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
E +++ L + +A + V E+ YE N
Sbjct: 60 GVRVEKVVEDKKPFVLKYEPGHPDANEEGYVQYP----NVNPIEEMVNMIEASRSYEANV 115
Query: 115 KLIKKLNSMVMHVV 128
++ + M +
Sbjct: 116 TVLNTAKQLAMRAL 129
>gi|167465320|ref|ZP_02330409.1| flagellar basal body rod protein FlgC [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 149
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 39/145 (26%), Gaps = 17/145 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-TPN---------YR-------AKDISS 43
M+ F I+S R ++S NIANA T Y+ K+ ++
Sbjct: 1 MRLTNGFDISSSALTAQRLRMDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTN 60
Query: 44 FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
F L + + D V V I E+
Sbjct: 61 FAQNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDM 120
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+ +
Sbjct: 121 ISATRSYEANVTALNATKGMITKAL 145
>gi|163794133|ref|ZP_02188106.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
gi|159180747|gb|EDP65266.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
Length = 136
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 11/131 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFL 53
M +I++ R ++V+EN+ANA + YR K I+ FE L++
Sbjct: 1 MDLTNAIKISASGMRAQGTRLRVVAENVANAESLGNTAADDPYRRKTIT-FENELDRKIN 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + D + D +++ V E+ + YE N
Sbjct: 60 ADMVRISKIGR-DQGDFNIVYEPHHPLADDKGYIKMP--NVNTLIEMTDMREAERSYEAN 116
Query: 114 TKLIKKLNSMV 124
+I+ S++
Sbjct: 117 VSVIESSKSLI 127
>gi|332284017|ref|YP_004415928.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
gi|330427970|gb|AEC19304.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
Length = 138
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISS-FETILNQNFL 53
M + FQIA S+R + + N+ANA + P+ YRA+ + + Q+
Sbjct: 1 MSTSSIFQIAGSALTAQSQRMNVTASNLANADSVAGPDGQPYRARQVVFQMAPVAGQSQA 60
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
A +S+ + + PL G N V + E Y+ N
Sbjct: 61 AAVGGVRVAAVVESAAPPRLQYDPKNPLANDDGYVTMPN-VDVVAETVNMISASRSYQAN 119
Query: 114 TKLIKKLNSMVMHVV 128
++I S++M +
Sbjct: 120 VEVINTAKSLMMRTL 134
>gi|325918875|ref|ZP_08180952.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
35937]
gi|325534912|gb|EGD06831.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
35937]
Length = 135
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 40/135 (29%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + Q+ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSVEATYKPIEPIFQAQQSRQDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPD---VDPVSQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|160896081|ref|YP_001561663.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
gi|160361665|gb|ABX33278.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
Length = 134
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R +V+ N+AN P+ Y+A+ + F+T+
Sbjct: 1 MSMFSIFSISGSAVSAQSQRLNVVASNLANVDAVAGPDGKAYQARQVV-FQTVAMGEEGS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + ++ G + + PL G N V +E+ Y+ N
Sbjct: 60 SGVRVSAISQDNTPGRRIHDP--QHPLADAEGYVTHSN-VSAVDEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S+++ ++
Sbjct: 117 EVMNTTKSLLLKTLQ 131
>gi|83646784|ref|YP_435219.1| flagellar basal body protein [Hahella chejuensis KCTC 2396]
gi|83634827|gb|ABC30794.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396]
Length = 125
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ ++ + +Q+++++N+ANAST YRA + +F+ L +A + L ++D
Sbjct: 11 LLNKSLDAAQLQQRLIAQNVANASTEGYRAMSL-NFKAALQHIDSVANSS---LNDADKV 66
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
N ++ + + V++ + ++ Y+ KL ++ +
Sbjct: 67 DRINNVNLDQFISLEEAAVKI-----ELDEQILALNKNVINYQALLTAKSKLGGIMKSAI 121
Query: 129 RG 130
G
Sbjct: 122 NG 123
>gi|113969604|ref|YP_733397.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-4]
gi|114046836|ref|YP_737386.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-7]
gi|113884288|gb|ABI38340.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-4]
gi|113888278|gb|ABI42329.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-7]
Length = 138
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F +A + S R + NIANA + + YR++ FE + +
Sbjct: 1 MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRH-PIFEAEMAKAQSQ 59
Query: 55 ARTHETHL--KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + +S + + P+ G N V + E+ Y++
Sbjct: 60 QQASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPN-VNVMEEMADMISASRSYQM 118
Query: 113 NTKLIKKLNSMVMHVV 128
N ++ + SM+ +
Sbjct: 119 NVQVAEAAKSMLQQTL 134
>gi|6502601|gb|AAF14368.1|AF133240_2 flagellar proximal rod protein FlgC [Rhodobacter sphaeroides]
Length = 139
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRA----KDISS-FETILNQNFLMARTHE 59
+ F + ++ + R V+ N+ANA T + RA + + FET
Sbjct: 7 SVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGRTGLST 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
T + S V V + E+ + Y+ + +
Sbjct: 67 TDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVST 126
Query: 120 LNSMV 124
L S++
Sbjct: 127 LRSLM 131
>gi|332533177|ref|ZP_08409046.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037459|gb|EGI73913.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
haloplanktis ANT/505]
Length = 143
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 20/143 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F IA + + R + NI+NA+T YRA+ + +
Sbjct: 1 MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRAR-----QPVFAAELTK 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV---SGN------TVGITNELYKSGH 105
A ++ + S +APL N V + E+
Sbjct: 56 ASASVSNQQGSAVGVKVLGIVESDAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMIS 115
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
Y+ N ++ M+ +
Sbjct: 116 ASRSYQTNVQVADAAKQMLSKTL 138
>gi|295678060|ref|YP_003606584.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
gi|295437903|gb|ADG17073.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
Length = 141
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMART 57
+ F +A + SER + + N+ANA T Y+AK + ART
Sbjct: 5 MNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVI----FAVNPIGGART 60
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYLYE 111
+ N V E+ Y+
Sbjct: 61 RSGQQVGGVRVTGVVDDPSPMKTAYDPGNPAADANGYVTLPNVDPVQEMVNMISASRSYQ 120
Query: 112 LNTKLIKKLNSMVMHVVR 129
N + + ++++ +
Sbjct: 121 ANVETLNTAKTLMLKTLT 138
>gi|313901524|ref|ZP_07834971.1| hypothetical protein ThesuDRAFT_2310 [Thermaerobacter subterraneus
DSM 13965]
gi|313468219|gb|EFR63686.1| hypothetical protein ThesuDRAFT_2310 [Thermaerobacter subterraneus
DSM 13965]
Length = 122
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGV-QVSGNTVGITNELYKSGHIKYLY 110
+ TH HL G A A +T + GN V + E+ + Y
Sbjct: 45 LSLGVTHPGHL-----PGRWAPADPAVAVYRETGSSLRNDGNNVDLDAEMARMAENGVHY 99
Query: 111 ELNTKLIKKLNSMVMHVV 128
+ + + +++ V+
Sbjct: 100 QALVRQLSDRIALLRTVI 117
>gi|262276419|ref|ZP_06054228.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
101886]
gi|262220227|gb|EEY71543.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
101886]
Length = 136
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA++ + Y+A+ F LN+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAAETYKARH-PVFAAELNRFQQG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A +S + E P+ G N V + E+ Y+ N
Sbjct: 60 ASVPVQVKGIVESQKPLRAEYNPEHPMANADGYIYKPN-VNVMEEMANMISASRSYQTNV 118
Query: 115 KLIKKLNSMVMHVVR 129
++ + M+M ++
Sbjct: 119 EVAEASKQMLMRTLQ 133
>gi|253573516|ref|ZP_04850859.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847044|gb|EES75049.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
786 str. D14]
Length = 149
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 45/147 (30%), Gaps = 19/147 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M F I+S R ++S NIANA T YR K + F
Sbjct: 1 MNISDSFGISSSALTAQRLRMDVISSNIANAETTRAKIVDGKAVPYRRKTVVMAPKEMDF 60
Query: 45 ETILNQNFLMARTHETH--LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
++ LN + + K + + P + G N V I E+
Sbjct: 61 DSALNSVMGKEVSSQGVKITKIQEDPSPLKPVYNPTHPDADSEGYVYMPN-VDILKEMVD 119
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
YE N + +M ++
Sbjct: 120 MISATRSYEANVTALNASKAMFTKALQ 146
>gi|2275159|gb|AAB81411.1| FlgC [Sinorhizobium meliloti]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 12/135 (8%)
Query: 2 QPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNFL 53
P+T ++++ S R +IVSENIANA P +R K I SF +++
Sbjct: 1 DPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTI-SFAAEVDRASG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ L +D S + D+ V++ + I E+ YE N
Sbjct: 60 ASLVEVERL-GTDDSEFNIEFDPGNPAADEKGMVKLP--NLNILIEMADMREANRAYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+ IK+ ++ +
Sbjct: 117 LQTIKQSRDLISQTI 131
>gi|117923583|ref|YP_864200.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
gi|117607339|gb|ABK42794.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
Length = 141
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 11/138 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD----ISSFETILNQ 50
M +T F++ + R I+SEN+ANA T Y+ +D F+ L +
Sbjct: 1 MDFLTSFKVTASGLAAQRLRMNIISENVANAQTTRTPEGGPYKRRDPVFMSRPFQDYLTR 60
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
T + + D V+ + + E+ Y
Sbjct: 61 EESAGATGVA-VDRVNVDHRPPRLQYDPNHPDANADGYVAMPNIDVMTEMVNMMSASRSY 119
Query: 111 ELNTKLIKKLNSMVMHVV 128
E N ++ M + +
Sbjct: 120 EANVSVLNASKQMALKAL 137
>gi|153001474|ref|YP_001367155.1| flagellar basal body rod protein FlgC [Shewanella baltica OS185]
gi|160876205|ref|YP_001555521.1| flagellar basal body rod protein FlgC [Shewanella baltica OS195]
gi|151366092|gb|ABS09092.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS185]
gi|160861727|gb|ABX50261.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS195]
gi|315268395|gb|ADT95248.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS678]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F +A + S R + NIANA + + YR++ FE + +
Sbjct: 1 MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRH-PIFEAEMAKAQSQ 59
Query: 55 ARTHETHL--KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + +S + + P+ G N V + E+ Y++
Sbjct: 60 QQASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPN-VNVMEEMADMISASRSYQM 118
Query: 113 NTKLIKKLNSMVMHVV 128
N ++ + SM+ +
Sbjct: 119 NVQVAEAAKSMLQQTL 134
>gi|308050374|ref|YP_003913940.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
9799]
gi|307632564|gb|ADN76866.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
9799]
Length = 139
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F A + S R + NIANA++ + YRA+ FE L Q
Sbjct: 1 MSLFKIFDTAGSGMSAQSVRLNTTASNIANANSVSSSAGETYRARQ-PIFEAALQQASGY 59
Query: 55 A-RTHETHLKESDSSGLHWNAHVIEA-PLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
++ + S PL G N V + E+ Y+
Sbjct: 60 QNQSVPVQVAGIVESDKPLVRQFSPNHPLADQEGYIYKPN-VNVVEEMANMISASRSYQA 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N ++ M +R
Sbjct: 119 NVQVASAAKDMAQQTLR 135
>gi|226327748|ref|ZP_03803266.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
gi|225203452|gb|EEG85806.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
Length = 134
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MSLFSIFDISGSALSAQSQRLNVSASNMANADSVAGPDGEPYRAKQVV-FQVNAPAGQEV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + + D + D+ V++ V + E+ + Y+ N
Sbjct: 60 GGVRVTEVVD-DPAPFRMEYQPGHPFADEKGYVRMP--NVDVVGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ S++ +
Sbjct: 117 EVMNTAKSLMQKTL 130
>gi|54307268|ref|YP_128288.1| FlgC flagellar basal-body rod protein [Photobacterium profundum
SS9]
gi|46911688|emb|CAG18486.1| Hypothetical FlgC flagellar basal-body rod protein [Photobacterium
profundum SS9]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M T + IA + + R V+ N+ANA Y AK F T++
Sbjct: 1 MSFSTIYDIAGSAMSAQTIRLNTVASNLANADVVSGSDKTGYHAKR-PVFSTVMIDMDSP 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + S V +TV + E+ +E N
Sbjct: 60 VPGAKVQIDDVIESTEPLRRRYEPNHPKANNEGYVFHSTVNVVEEMADMMAASRNFETNV 119
Query: 115 KLIKKLNSMVMHVVR 129
++ + SM ++R
Sbjct: 120 NVMSRARSMQQSILR 134
>gi|300024608|ref|YP_003757219.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526429|gb|ADJ24898.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
ATCC 51888]
Length = 139
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 18 SERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S R ++VSENIANAST Y+ K I SF++++++N + ++
Sbjct: 20 SSRMRVVSENIANASTTGKTPGADPYQRKTI-SFQSVMDENAGADLVQVDKISHDETPFE 78
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
A + V + EL Y NT++IK++ +V +
Sbjct: 79 TQYMPGNAAADSNGMVKMPN---VNMLVELADMREASRSYTANTQVIKQVRELVSMTI 133
>gi|121602485|ref|YP_989402.1| flagellar basal body rod protein FlgC [Bartonella bacilliformis
KC583]
gi|120614662|gb|ABM45263.1| flagellar basal-body rod protein FlgC [Bartonella bacilliformis
KC583]
Length = 137
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 11/118 (9%)
Query: 18 SERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S R +I++EN+ANA++ YR K + SFET LN H + + +
Sbjct: 20 STRLRIIAENLANANSTGRAPGAAPYRRKTV-SFETALNPYVDAQGVHVKRIGVDKAPFI 78
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
A + N V E+ YE N ++I+++ +V +
Sbjct: 79 MRYEPGHLAADSNGYVKYPNVNAVI---EMADMREANRSYEANLQVIRQVRDLVSQTI 133
>gi|21242729|ref|NP_642311.1| flagellar basal body rod protein FlgC [Xanthomonas axonopodis pv.
citri str. 306]
gi|294625272|ref|ZP_06703911.1| flagellar biosynthesis cell-proximal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294664589|ref|ZP_06729930.1| flagellar biosynthesis cell-proximal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|21108205|gb|AAM36847.1| flagellar biosynthesis cell-proximal portion of basal-body rod
[Xanthomonas axonopodis pv. citri str. 306]
gi|268589170|gb|ACZ06861.1| flagella basal body rod protein [Xanthomonas axonopodis pv.
glycines]
gi|292600446|gb|EFF44544.1| flagellar biosynthesis cell-proximal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292605646|gb|EFF48956.1| flagellar biosynthesis cell-proximal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 135
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 41/135 (30%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + Q+ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPD---VDPVSQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|78047588|ref|YP_363763.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|84624086|ref|YP_451458.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|166712064|ref|ZP_02243271.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|188576754|ref|YP_001913683.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188576945|ref|YP_001913874.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|325927873|ref|ZP_08189097.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
91-118]
gi|78036018|emb|CAJ23709.1| flagellar basal body rod protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|84368026|dbj|BAE69184.1| flagellar biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521206|gb|ACD59151.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521397|gb|ACD59342.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|325541713|gb|EGD13231.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
91-118]
Length = 135
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 40/135 (29%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + Q+ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPD---VDPVSQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|83858796|ref|ZP_00952318.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
gi|83853619|gb|EAP91471.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 9/124 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANAS----TPNYRA--KDISSFETILNQNFLMARTHET 60
QI++ S R ++++EN+ANA TP + I FE+ ++
Sbjct: 9 LQISAAGLRAQSSRMRVIAENVANAESTARTPEENPYQRQIPVFESEFDRQVGTELVRMN 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ +S A + + V EL + YE N +++
Sbjct: 69 DVALDESDFRMVYEPGHPAADGEGYVKYPN---VSSLVELMDMRDAQRSYEANLTMVEGT 125
Query: 121 NSMV 124
M+
Sbjct: 126 RRML 129
>gi|262404542|ref|ZP_06081097.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
gi|262349574|gb|EEY98712.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M + F + + S R S N+ANA + + AKD + F L++
Sbjct: 1 MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR 60
Query: 56 RTHE--THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ L +S E PL G N V + E+ Y+ N
Sbjct: 61 EPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPN-VNVMEEMANMISASRSYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 VQVADASKQMLLRTLQ 135
>gi|148261124|ref|YP_001235251.1| flagellar basal body rod protein FlgC [Acidiphilium cryptum JF-5]
gi|326404525|ref|YP_004284607.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
AIU301]
gi|146402805|gb|ABQ31332.1| flagellar basal-body rod protein FlgC [Acidiphilium cryptum JF-5]
gi|325051387|dbj|BAJ81725.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
AIU301]
Length = 134
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 11/131 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMART 57
T I + + R +++++N+ANA TP Y+ K I SF+ + +Q
Sbjct: 5 TTLDITAAGLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTI-SFQDVFSQTTGTDLV 63
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
++ + + A Q + N++ EL + Y+ N ++
Sbjct: 64 QVANIGKDTAPFPMKYDPSNPAANAQGYVKLPNVNSLV---ELMDMQQAERSYDANLSVM 120
Query: 118 KKLNSMVMHVV 128
M+ +
Sbjct: 121 NATRGMMTRTL 131
>gi|312882661|ref|ZP_07742398.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369622|gb|EFP97137.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + S NA + V + E+ Y+ N
Sbjct: 61 DHTVPVKVLGIVESQKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 121 QVADASKQMLLRTLQ 135
>gi|307546970|ref|YP_003899449.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
gi|307218994|emb|CBV44264.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
Length = 135
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F+I+ + S+R + + N+ANA + P+ YRAK + FET +
Sbjct: 1 MSMFSVFEISGSAMSAQSQRMNVTASNLANADSVAGPDGEAYRAKQVL-FETRAQSRTGV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S DQ + V E+ Y+ N
Sbjct: 60 GGVGVREVIEDPSPMRRQYRPEHPLADDQGYVDMPN---VDPAAEMVNMISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ +++ +
Sbjct: 117 EVMDTNKQLLLKTL 130
>gi|149188064|ref|ZP_01866359.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
gi|148838052|gb|EDL54994.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
Length = 138
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-SSFETILNQNFLMARTHE 59
M F + + S R S N+ANA + + AK+ + + A+ +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKETYKARHAVFGAELSKAQYNR 60
Query: 60 TH------LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
H L +S + + PL G N V + E+ Y+ N
Sbjct: 61 DHSVPVKVLGIVESDKPLSAEYNPDHPLANDEGYIYKPN-VNVMEEMANMISASRSYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M++ +R
Sbjct: 120 VQVADASKQMLLSTLR 135
>gi|229826300|ref|ZP_04452369.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
49176]
gi|229789170|gb|EEP25284.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
49176]
Length = 147
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSFETI 47
M I++ R ++++NIAN +T + KD++ F I
Sbjct: 1 MSIFGAMDISATGMTAQQLRTDVIAQNIANINTTRDQNGNVYRRKNVVFTEKDVTGFSQI 60
Query: 48 LNQNFLMA--RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKSG 104
L + T + S + ++ V + NTV E+
Sbjct: 61 LLRTAGRVGNGVKVTSIYSDTKSPVRLVYDPSHPDANEDGYVTYPNVNTV---QEMTDMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N +M++ +
Sbjct: 118 DATRSYEANVTAFNATKNMILKAL 141
>gi|15642198|ref|NP_231830.1| flagellar basal body rod protein FlgC [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121586290|ref|ZP_01676080.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
gi|121726545|ref|ZP_01679794.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
gi|147675208|ref|YP_001217716.1| flagellar basal body rod protein FlgC [Vibrio cholerae O395]
gi|153817070|ref|ZP_01969737.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
gi|153820804|ref|ZP_01973471.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
gi|227082323|ref|YP_002810874.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
gi|229507724|ref|ZP_04397229.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
gi|229512081|ref|ZP_04401560.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
gi|229519217|ref|ZP_04408660.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
gi|229607228|ref|YP_002877876.1| flagellar basal body rod protein FlgC [Vibrio cholerae MJ-1236]
gi|254849328|ref|ZP_05238678.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
gi|255747102|ref|ZP_05421047.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
gi|262161354|ref|ZP_06030464.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
gi|262167775|ref|ZP_06035477.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
gi|298500423|ref|ZP_07010228.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
gi|9656755|gb|AAF95344.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121549556|gb|EAX59582.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
gi|121630998|gb|EAX63377.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
gi|126512338|gb|EAZ74932.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
gi|126521596|gb|EAZ78819.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
gi|146317091|gb|ABQ21630.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
gi|227010211|gb|ACP06423.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
gi|227014095|gb|ACP10305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
gi|229343906|gb|EEO08881.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
gi|229352046|gb|EEO16987.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
gi|229355229|gb|EEO20150.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
gi|229369883|gb|ACQ60306.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MJ-1236]
gi|254845033|gb|EET23447.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
gi|255735504|gb|EET90904.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
gi|262023840|gb|EEY42539.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
gi|262028665|gb|EEY47319.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
gi|297541116|gb|EFH77170.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
Length = 138
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M + F + + S R S N+ANA + + AKD + F L++
Sbjct: 1 MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR 60
Query: 56 RTHE--THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ L +S E PL G N V + E+ Y+ N
Sbjct: 61 DPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSN-VNVMEEMANMISASRSYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 VQVADASKQMLLRTLQ 135
>gi|253998490|ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
gi|313200565|ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688]
gi|253985169|gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
gi|312439881|gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688]
Length = 134
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F ++ + S+R V+ N+ANA + Y+AK + F N +
Sbjct: 1 MSLFNVFNVSGSAMSAQSQRLNAVASNLANADSATSANGQPYKAKQVV-FSATPTNNAAV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + E S A Q + V +T E+ Y+ N
Sbjct: 60 SGVKVQQVIEDPSPPKVVYDPKHPAANAQGYVTMPN---VNVTEEMVNMISASRAYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+ + +M++ +
Sbjct: 117 ETMNAAKTMLLKTLT 131
>gi|220934392|ref|YP_002513291.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995702|gb|ACL72304.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
HL-EbGR7]
Length = 139
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 7/130 (5%)
Query: 6 FFQIASQHANWLSERQKIVSENIANAS----TP--NYRAKDISSFETILNQNFLMARTHE 59
F ++ + S R ++ N+ANA TP YRAK F ++L
Sbjct: 7 IFDVSGSALSAQSVRLNAIASNMANAQVASQTPEGAYRAKH-PVFASVLQAAGQSGSATP 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ S A + V + E+ Y+ N +++
Sbjct: 66 VRVVNVLESQAEPVAEYAPNHPLANEQGYIFKPNVSVVEEMANMISASRSYQNNVEVMNT 125
Query: 120 LNSMVMHVVR 129
+++ ++
Sbjct: 126 TKQLLLRTLQ 135
>gi|220929470|ref|YP_002506379.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
H10]
gi|219999798|gb|ACL76399.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
H10]
Length = 147
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 17/144 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + I++ R +S+NIANA+T YR +D+ FE + N
Sbjct: 1 MGIFSALDISASGLTAQRVRMDTISQNIANANTTRTTDGTPYRRRDVV-FEERTDSNSFS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAP----------LDQTTGVQVSGNTVGITNELYKSG 104
K + +G+ ++ V + D V+ V I E+
Sbjct: 60 RTLENASSKLNGGNGVRVSSIVEDPTEFKKVFDPGHPDADAEGYVNMPNVDIVTEMVNMI 119
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 120 SATRSYEANVTSVNATKSMALKAL 143
>gi|224534284|ref|ZP_03674862.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
gi|224514386|gb|EEF84702.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
Length = 152
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRINNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
+L G + ++PL SG+ V + E+
Sbjct: 60 GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|21231399|ref|NP_637316.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768548|ref|YP_243310.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113065|gb|AAM41240.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573880|gb|AAY49290.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Xanthomonas campestris pv. campestris str. 8004]
Length = 135
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 40/135 (29%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + Q+ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSIAGSAEATYKPIEPIFQAQQNRQDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPD---VDPVSQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|288958048|ref|YP_003448389.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288910356|dbj|BAI71845.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 136
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 11/127 (8%)
Query: 9 IASQHANWLSERQKIVSENIAN----ASTPN---YRAKDISSFETILNQNFLMARTHETH 61
+++ R K++SEN+AN A TP YR K + F+ L++ + +
Sbjct: 9 VSASGMKAQGTRLKVISENLANASTTAETPGDLPYRRKTVV-FKNELDRAMDVDKVRVAK 67
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S + + + N+V E + YE N I
Sbjct: 68 VDVDKSDFQRRYDPSHPSADADGYVLMPNVNSVV---EAMDMREAQRSYEANLSAIDTAR 124
Query: 122 SMVMHVV 128
M+ +
Sbjct: 125 QMLTRTI 131
>gi|77359720|ref|YP_339295.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas haloplanktis TAC125]
gi|76874631|emb|CAI85852.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas haloplanktis TAC125]
Length = 143
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 20/143 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F IA + + R + NI+NA+T YRA+ + +
Sbjct: 1 MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRAR-----QPVFAAELTK 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV---SGN------TVGITNELYKSGH 105
A ++ + S PL N V + E+
Sbjct: 56 ASASASNPQGSAVGVKVLGIVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMIS 115
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
Y+ N ++ M+ +
Sbjct: 116 ASRSYQTNVQVADAAKQMLSKTL 138
>gi|322832562|ref|YP_004212589.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
gi|321167763|gb|ADW73462.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
Length = 134
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ Y+AK + F+
Sbjct: 1 MSMLGIFDIAGSALAAQSQRLNVSASNMANADSVTGPDGKPYKAKQVV-FQVDAAPGQET 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + +E+ + Y+ N
Sbjct: 60 GGVKVAQVVDDPAPMRMVYEPGNPMADAKGYVQMPN---VDVVSEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++M +
Sbjct: 117 EVLNTTKSLMMKTLT 131
>gi|319898635|ref|YP_004158728.1| flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
gi|319402599|emb|CBI76144.1| Flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
Length = 138
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
QIA+ + S R +I++EN+ANA++ Y+ K + SFE LN H
Sbjct: 10 QIATTGLSAQSTRLRIIAENLANANSTGKSAGARPYQRKTV-SFEATLNPYIDAQGVHVK 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ +D + D V+ V E+ YE N ++I++
Sbjct: 69 RIS-TDKAPFIMRYEPGHLAADSNGYVKYP--NVNSIIEMADMREANRSYEANLQVIRQA 125
Query: 121 NSMVMHVV 128
+V +
Sbjct: 126 RDLVSQTI 133
>gi|326386928|ref|ZP_08208542.1| flagellar cell-proximal portion protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208608|gb|EGD59411.1| flagellar cell-proximal portion protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 140
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 14/134 (10%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMART 57
+T F + Q + R + N+ANA T YR + F T+L+++ +A
Sbjct: 9 LTLFGLTGQAMSAQLVRMNTAASNLANAGTVASNAQGAYRPLK-AVFATVLDRSTGLASV 67
Query: 58 HETHLKESDSSG--LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ +S ++ H H + V N E+ + Y+ +
Sbjct: 68 KVQGVYQSGATPVRTHNPDHPLADANGDVWSSPVDENA-----EMVEMTESARQYQNVVE 122
Query: 116 LIKKLNSMVMHVVR 129
++ +++ +R
Sbjct: 123 AMQTGKQLMLDTLR 136
>gi|148358807|ref|YP_001250014.1| flagellar basal body rod protein FlgF [Legionella pneumophila
str. Corby]
gi|296106852|ref|YP_003618552.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
2300/99 Alcoy]
gi|148280580|gb|ABQ54668.1| flagellar basal body rod protein FlgF [Legionella pneumophila
str. Corby]
gi|295648753|gb|ADG24600.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
2300/99 Alcoy]
Length = 248
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+PI + I+ +++ +RQ+I++ N+AN +TP ++A D+ +T+ N
Sbjct: 1 MEPILYNSISGSRSDF--KRQEIIANNLANINTPGFKA-DLYQAQTMYMNNANGKNQFSA 57
Query: 61 H--LKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
H + ++ + +I D + G
Sbjct: 58 HSFITQNANGIDTSPGEIITTGRDLDVAIDGDG 90
>gi|212709490|ref|ZP_03317618.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
30120]
gi|212687828|gb|EEB47356.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
30120]
Length = 134
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I+S S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MGLLSIFDISSSALTAQSQRLNVSASNMANAESVVGPDGEPYRAKQVV-FQMAPQGRNQV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ L + + ++ + +TVG E+ + Y+ N
Sbjct: 60 GGVRVSELIDDPAPPRMEYKPGHPLADEKGYVKMPNVDTVG---EMINTISASRSYQANL 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +
Sbjct: 117 EVMNTAKTLLQKTLT 131
>gi|1857438|gb|AAC45656.1| FlgC [Proteus mirabilis]
Length = 134
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+AN + P+ YRAK + F+ +
Sbjct: 1 MSLFSIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVV-FQVNAPAGQEI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
H T + + + ++ + + V + E+ + Y+ N
Sbjct: 60 GGVHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPN---VDVVGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ S++ +
Sbjct: 117 EVMNTAKSLMQKTL 130
>gi|289666045|ref|ZP_06487626.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 135
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/135 (8%), Positives = 41/135 (30%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + ++ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRRDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPD---VDPVSQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|328543166|ref|YP_004303275.1| flagellar basal-body rod protein C [polymorphum gilvum SL003B-26A1]
gi|326412912|gb|ADZ69975.1| Flagellar basal-body rod protein C [Polymorphum gilvum SL003B-26A1]
Length = 136
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + I++ + R ++++EN+ANA TP+ YR + I +F+ +++
Sbjct: 1 MDLVKSLFISASGLKAQNGRIRVIAENLANADSTGRTPDEDPYR-RKIPTFKNRFDRDLQ 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
L E D S D V+V V E + YE N
Sbjct: 60 AELVELGKLAE-DRSEFPTRYEPGHPAADANGNVRVP--NVNSLVETVDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
+I+ M+ +
Sbjct: 117 LNVIESTRRMLQRTI 131
>gi|255021352|ref|ZP_05293400.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
ATCC 51756]
gi|254969215|gb|EET26729.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
ATCC 51756]
Length = 138
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + +AS S R +V+ N+ANA++ YRA+++ T L+
Sbjct: 1 MSLFSVLDVASSALTAQSYRLNVVASNLANANSATSSDGQPYRAREVVFAATPLHSGQAP 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + V V +E+ Y+ N
Sbjct: 61 AGVEGVQVAGVVEKPGPLKLVYEPGNPAANAEGYVQMPNVNPVDEMVNMISASRAYQANV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ +++ +
Sbjct: 121 NVMNTTKALLQKTLT 135
>gi|239907806|ref|YP_002954547.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
RS-1]
gi|239797672|dbj|BAH76661.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
RS-1]
Length = 128
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A + S + + N+AN +T Y+++D L + + S G
Sbjct: 8 AQSALSAFSTSMAVTANNVANVNTDGYKSQD-----ARLETGPDGQGVRVSDIVRDASPG 62
Query: 70 LHWNAHVI---EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ V +A + + + V + V + + +E N I+ + M+
Sbjct: 63 GYQPESVSAYNQAGVYEPSAGLVETSNVDLARQTVDMIQTSRAFEANVVTIRSQDQML 120
>gi|149195179|ref|ZP_01872270.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
TB-2]
gi|149134731|gb|EDM23216.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
TB-2]
Length = 165
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 51/165 (30%), Gaps = 42/165 (25%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILNQ 50
M + F I+ + R I+SENIANA+T YR K++ FE ILN+
Sbjct: 1 MAFLNSFDISGYGLSAQRFRINIISENIANANTTRTPEGGPYRRKEVIFKAIPFEDILNK 60
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLD--------------------QTTGVQVS 90
+ H E+ + V + P++
Sbjct: 61 EIENSA--NFHKYENPLDEEGEDYKVAKPPIETVIVDKIVRDDSKPILKYEPDNPDANAD 118
Query: 91 G-------NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G N V E+ Y+ N + +M +
Sbjct: 119 GYVAYPNINPVI---EMADLIEATRSYQANVAAFQSAKNMAQSAI 160
>gi|188991643|ref|YP_001903653.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
campestris str. B100]
gi|167733403|emb|CAP51604.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 135
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 40/135 (29%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + Q+ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQNRQDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + V +++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPD---VDPVSQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATLT 132
>gi|291558197|emb|CBL35314.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum V10Sc8a]
Length = 160
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 51/155 (32%), Gaps = 27/155 (17%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-----SSFETILN 49
M ++ IA+ R ++S+N+ANA T YR + + F ++L
Sbjct: 1 MAFLSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSENKGFNSVLE 60
Query: 50 QNFL-----MARTHETHLKESDSSGLHWNAHVIEA-----PLDQTTGVQVSGN------T 93
+ +A + + + ++E P+ T N
Sbjct: 61 ETIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPN 120
Query: 94 VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V + E + YE N ++ + SM +
Sbjct: 121 VDVAEEQMDAMAATRSYEANLAVLNAVKSMAQTAL 155
>gi|216264021|ref|ZP_03436015.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
gi|215980065|gb|EEC20887.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
Length = 152
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVNNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
+L G + ++PL SG+ V + E+
Sbjct: 60 GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|326404069|ref|YP_004284151.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
AIU301]
gi|325050931|dbj|BAJ81269.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
AIU301]
Length = 260
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S NIAN +T Y+A+ ++ F+ +L Q+ A ++ +
Sbjct: 1 MRALDIAATGMQAQQTNVEVISNNIANMTTTGYKAQRVA-FQDLLYQDLRRAGSNSSDAG 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
SG V A +DQ +Q + NT+ +
Sbjct: 60 TIVPSGTQIGLGVKTAAIYRIDQQGNLQQTNNTLDM 95
>gi|291529042|emb|CBK94628.1| flagellar basal-body rod protein FlgC [Eubacterium rectale M104/1]
Length = 146
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 20/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSFETI 47
M F I++ R I+++NIAN +T + + K+++ F I
Sbjct: 1 MGLFQAFNISASGMTAERFRTDIIAQNIANVNTTSTKGGTPYRRKIVTFSEKNVTPFSQI 60
Query: 48 LNQNFLMARTHE---THLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKS 103
+ + A + + + S+ D V + NTV E+
Sbjct: 61 YSSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTV---TEMTNL 117
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE N + SM + ++
Sbjct: 118 IDATRAYEANATAFEASKSMAQNGLQ 143
>gi|111115118|ref|YP_709736.1| flagellar basal body rod protein FlgC [Borrelia afzelii PKo]
gi|110890392|gb|ABH01560.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
Length = 152
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVNNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
+L G + ++PL SG+ V + E+
Sbjct: 60 GPFVPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|325921022|ref|ZP_08182904.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
19865]
gi|325548504|gb|EGD19476.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
19865]
Length = 135
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 39/135 (28%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F +A + S R ++ N+ANA + Y+ + Q+ +
Sbjct: 1 MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQARQNRQDPSL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +++ + V ++ Y+
Sbjct: 61 TSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPD---VDPVAQMVNMISASRNYQAGV 117
Query: 115 KLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 118 EMLNTAKELALATIT 132
>gi|325109009|ref|YP_004270077.1| flagellar basal-body rod protein FlgB [Planctomyces brasiliensis
DSM 5305]
gi|324969277|gb|ADY60055.1| flagellar basal-body rod protein FlgB [Planctomyces brasiliensis
DSM 5305]
Length = 179
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNF 52
+ Q A + S R +++ NIAN TP+YR +D + FE +
Sbjct: 13 LLEQVAAFGSRRHSVLAGNIANIDTPDYRTRDLPVQDFEKAVQAAI 58
>gi|293605001|ref|ZP_06687397.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
ATCC 43553]
gi|292816606|gb|EFF75691.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
ATCC 43553]
Length = 139
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 16/140 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IA + S+R + + N+ANA + P+ YRA+ + + N
Sbjct: 1 MSLLSIFDIAGSALSAQSQRMNVTASNLANADSVVGPDGQPYRARQV-----VFQVNPAA 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYL 109
+ + +G+ + ++ D +S V E
Sbjct: 56 GQAMGQEIGGVRVAGVIQDPSPLKQIYDPKHPLADAQGYISMPNVDPVAETVNMIAASRS 115
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N +++ S++ +
Sbjct: 116 YQANVEVLNTAKSLMQKTLT 135
>gi|315121849|ref|YP_004062338.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495251|gb|ADR51850.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 134
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 14/128 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
QIA+ S R ++SENIANA T YR K I SFE ++++ + +
Sbjct: 9 QIANSGLTVQSSRMHVISENIANARTTGNTAGSDPYRRKTI-SFEEVMHEGGGVRVKKVS 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
D S + + V+ V + E LY N ++IK+
Sbjct: 68 ----VDKSPFVEEFDPSHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQIIKQS 121
Query: 121 NSMVMHVV 128
M+ +
Sbjct: 122 RDMIATTL 129
>gi|221069324|ref|ZP_03545429.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
gi|264676568|ref|YP_003276474.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
CNB-2]
gi|299531288|ref|ZP_07044698.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
gi|220714347|gb|EED69715.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
gi|262207080|gb|ACY31178.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
CNB-2]
gi|298720695|gb|EFI61642.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
Length = 134
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R +V+ N+AN P+ Y+A+ + F+T+ N
Sbjct: 1 MSMFSIFNISGSAVSAQSQRLNVVASNLANVDAVAGPDGSVYKARQVV-FQTVPMGNDGS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + E ++ G + D V S V +E+ Y+ N
Sbjct: 60 AGVKVNAISEDNTPGRRIH-DPSNPLADGEGYVTHS--NVSAVDEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 117 EVMNTAKTLLLKTLQ 131
>gi|226321611|ref|ZP_03797137.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
gi|226232800|gb|EEH31553.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
Length = 152
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 50/148 (33%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVNNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
+L S G + ++PL SG+ V + E+
Sbjct: 60 GPFIPDYLDNGISQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|327399355|ref|YP_004340224.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
gi|327181984|gb|AEA34165.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
Length = 137
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 12/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS---TPN---YRAKDISSFETI--LNQNF 52
M IAS + R I+S NIANA TP Y+ +D+ FE I +
Sbjct: 1 MSIFDSMNIASSGMSAQRLRMNIISSNIANADTVRTPEGGPYKRRDVV-FEAIGYSKFSD 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
++ + + D+ + N V E+ Y+
Sbjct: 60 VLKKVQVADIIRDDTPPKLVYDPSNPLANKDGYVAYPNINPVI---EMTNLIDAMRTYQA 116
Query: 113 NTKLIKKLNSMVMHVV 128
N +I + +
Sbjct: 117 NASVIDSAKQTIQAAL 132
>gi|261253616|ref|ZP_05946189.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
102891]
gi|260937007|gb|EEX92996.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
102891]
Length = 138
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T L S +A + V + E+ Y+ N
Sbjct: 61 DHTVPVKLMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 121 QVADASKQMLLRTLQ 135
>gi|149375036|ref|ZP_01892809.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
gi|149360925|gb|EDM49376.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
Length = 149
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA S R + NIANA T + YRA+ F I
Sbjct: 1 MSLGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDQTYRARK-PVFAAIQQSMLNP 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
++ ++ ++E+ + + N V + E+
Sbjct: 60 SQQSLAFGSDTGPGAGVRVEGIVESDAELQMRYEPDHPAANEDGYVFYPNVNVVEEMADM 119
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
+++N ++ SM+ ++
Sbjct: 120 MSSSRSFQMNVDIMNSAKSMMQRILT 145
>gi|238924172|ref|YP_002937688.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
gi|238875847|gb|ACR75554.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
gi|291524901|emb|CBK90488.1| flagellar basal-body rod protein FlgC [Eubacterium rectale DSM
17629]
Length = 146
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 20/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSFETI 47
M F I++ R I+++NIAN +T + + K+++ F I
Sbjct: 1 MGLFQAFNISASGMTAERFRTDIIAQNIANVNTTSTKEGTPYRRKIVTFSEKNVTPFSQI 60
Query: 48 LNQNFLMARTHE---THLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKS 103
+ + A + + + S+ D V + NTV E+
Sbjct: 61 YSSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTV---TEMTNL 117
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
YE N + SM + ++
Sbjct: 118 IDATRAYEANATAFEASKSMAQNGLQ 143
>gi|295696111|ref|YP_003589349.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
gi|295411713|gb|ADG06205.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
Length = 155
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 40/147 (27%), Gaps = 24/147 (16%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAS-------TPN-YRAKDIS--------SFETIL 48
F I+ + R +++ NIANA TP YR + + SF L
Sbjct: 5 DTFAISGSGLSAQRLRMDVIAGNIANADTTRRPDGTPGPYRRRMVVMEPQPAPGSFAAAL 64
Query: 49 NQNFLMARTHETHLKESDSSGL-------HWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
+ N ++ P G N V + E+
Sbjct: 65 ASAGGTGVPEGVRVSAIVEDPSPFQLKYDPSNPDAVQNPASPLYGYVQLPN-VDVATEMV 123
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M + +
Sbjct: 124 DLISASRAYEANVTALDAGKMMAVKAL 150
>gi|28869138|ref|NP_791757.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
tomato str. DC3000]
gi|66046709|ref|YP_236550.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
syringae B728a]
gi|71737330|ref|YP_275565.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|213967584|ref|ZP_03395732.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tomato T1]
gi|237799204|ref|ZP_04587665.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806223|ref|ZP_04592927.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|257484951|ref|ZP_05638992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289627761|ref|ZP_06460715.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651649|ref|ZP_06482992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298487859|ref|ZP_07005899.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|301385711|ref|ZP_07234129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tomato Max13]
gi|302060077|ref|ZP_07251618.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tomato K40]
gi|302134836|ref|ZP_07260826.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|302185585|ref|ZP_07262258.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
syringae 642]
gi|28852378|gb|AAO55452.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
tomato str. DC3000]
gi|63257416|gb|AAY38512.1| Flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
syringae B728a]
gi|71557883|gb|AAZ37094.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|213927885|gb|EEB61432.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tomato T1]
gi|298157584|gb|EFH98664.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325091|gb|EFW81160.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329350|gb|EFW85343.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330866420|gb|EGH01129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330875981|gb|EGH10130.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330880520|gb|EGH14669.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330889087|gb|EGH21748.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
mori str. 301020]
gi|330899399|gb|EGH30818.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330943205|gb|EGH45612.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330953719|gb|EGH53979.1| flagellar basal body rod protein FlgC [Pseudomonas syringae Cit 7]
gi|330961194|gb|EGH61454.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330967088|gb|EGH67348.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330972411|gb|EGH72477.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330975974|gb|EGH76040.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330986466|gb|EGH84569.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011040|gb|EGH91096.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331017028|gb|EGH97084.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
lachrymans str. M302278PT]
gi|331022059|gb|EGI02116.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027336|gb|EGI07391.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 146
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 16/144 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA + + R + NIANA T + YRA+ F T++
Sbjct: 1 MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARH-PVFATVMQGQQST 59
Query: 55 ART----HETHLKESDSSGLHWNAHVIEAPLDQTT-GVQVSGN----TVGITNELYKSGH 105
+ + +G+ ++ +EA + G V + E+
Sbjct: 60 GGSLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMIS 119
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ SM+ V+
Sbjct: 120 ASRSFQTNAEIMNTAKSMMQKVLT 143
>gi|84514835|ref|ZP_01002198.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
SKA53]
gi|84510994|gb|EAQ07448.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
SKA53]
Length = 139
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 11/132 (8%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST-PNYRAKDISSFETILN-------QNFLMAR 56
F IA + R V+ NIANA+T + + +N A
Sbjct: 6 NVFDIAGRSMAAQMVRLNTVASNIANANTRSGSAEQTFRPLRPVFQTAFEGGIRNAERAT 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ D + ++ V + EL Y+ N ++
Sbjct: 66 VDVKEIVALDREAQRVHEPGHPLADEEGFVYMP---PVDMNEELVDMLEASRQYQNNLEV 122
Query: 117 IKKLNSMVMHVV 128
+ + ++++ V
Sbjct: 123 LTTMRTLMLRTV 134
>gi|330720177|gb|EGG98566.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
IMCC2047]
Length = 150
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 18/147 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD--ISSFETILNQNF 52
M F +A + + R V+ NIANA + + YRA+ S +NQ+
Sbjct: 1 MSLNNIFDVAGTGMSAQTIRLNTVASNIANAESVSSSTGETYRARHPVFSVIRDQVNQDM 60
Query: 53 LMARTHETHLKESDSSGLHWNAHV-IEAPLDQTTGVQV---SGN------TVGITNELYK 102
L + S G+ + V +A L Q N V + E+
Sbjct: 61 LGGGFNNNFNGMSAGYGVKVDGIVESQAELRQKYQPDHPSADENGYVYYPNVDVVTEMAD 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
Y+ N +++ M+ V+
Sbjct: 121 MISASRAYQTNVEIMNTAKQMMQRVLT 147
>gi|27363707|ref|NP_759235.1| flagellar basal body rod protein FlgC [Vibrio vulnificus CMCP6]
gi|37679145|ref|NP_933754.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
gi|320157111|ref|YP_004189490.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
gi|27359823|gb|AAO08762.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus CMCP6]
gi|37197887|dbj|BAC93725.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
gi|319932423|gb|ADV87287.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
Length = 138
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNF--L 53
M F + + S R S N+ANA + + AKD + F L+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMYNR 60
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
L +S + E PL G N V + E+ Y+ N
Sbjct: 61 GDTVPVKVLGIVESDKPLSAEYNPEHPLANDEGYIYKPN-VNVMEEMANMISASRAYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 VQVADASKQMLLRTLQ 135
>gi|315127355|ref|YP_004069358.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas sp. SM9913]
gi|315015869|gb|ADT69207.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas sp. SM9913]
Length = 143
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 20/143 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F IA + + R + NI+NA+T YRA+ + +
Sbjct: 1 MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQNETYRAR-----QPVFAAELTK 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV---SGN------TVGITNELYKSGH 105
A ++ + S PL N V + E+
Sbjct: 56 ASASASNPQGSAVGVKVLGVVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMIS 115
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
Y+ N ++ M+ +
Sbjct: 116 ASRSYQTNVQVADAAKQMLSKTL 138
>gi|134300249|ref|YP_001113745.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
MI-1]
gi|134052949|gb|ABO50920.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
MI-1]
Length = 145
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 41/141 (29%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN---------YRAKDISSFETILNQN 51
M F I++ R ++S NIAN +TP+ YR + + F L Q
Sbjct: 1 MGLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRR-VPIFAEQLRQT 59
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIK 107
+ A GN + I NE+
Sbjct: 60 ISTKGVEPKGAGVRVKAITEDPAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITAS 119
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 120 RTYEANVTALNAAKSMALKAL 140
>gi|303327773|ref|ZP_07358213.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
3_1_syn3]
gi|302862134|gb|EFL85068.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
3_1_syn3]
Length = 133
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM-ARTHETHLKESD 66
+ + N S + + N+AN +T + + + + A ++ +
Sbjct: 9 NLGASAMNAHSWGMAVTAHNVANVNTAGFAPQHAVYATGPGGRGVRLDAVLQDSGVAGRL 68
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ + N V AP + G T + E+ + + YE N ++++ ++M+
Sbjct: 69 PAEVRNNPAVSTAPASMESDFVNPGGT-DLGREMTQMISTQRTYEANAQVVRTGDAML 125
>gi|240145509|ref|ZP_04744110.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
L1-82]
gi|257202324|gb|EEV00609.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
L1-82]
gi|291536000|emb|CBL09112.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
M50/1]
gi|291538494|emb|CBL11605.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
XB6B4]
Length = 146
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETI 47
M F I++ R +++NIAN +T YR K + + F
Sbjct: 1 MGLFQAFDISASGMTAERFRMDTIAQNIANINTTRTEDGTPYRRKIVTFAEKTETPFSQY 60
Query: 48 LNQNFLMARTHE---THLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKS 103
A + T +KE D + + D+ V + NTV E+
Sbjct: 61 YETARARAVGNGVKVTSVKEDDETEMRMVYDPSHPDADENGYVTYPNVNTV---TEMTNL 117
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE NT SMV +
Sbjct: 118 IDATRAYEANTTAFDATKSMVQAAL 142
>gi|301631992|ref|XP_002945075.1| PREDICTED: flagellar basal-body rod protein flgC-like [Xenopus
(Silurana) tropicalis]
Length = 134
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+AN P+ Y+A+ + F+T +
Sbjct: 1 MSIFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVV-FQTTPMGSDSA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A ++ES G + + + N V E+ Y+ N
Sbjct: 60 AGVRVRSIEESQVPGRRVFDPGHPSADGEGYVNHSNVNAV---EEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 117 EVMNTAKTLLLKTLQ 131
>gi|163852027|ref|YP_001640070.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
PA1]
gi|218530781|ref|YP_002421597.1| flagellar basal body rod protein FlgC [Methylobacterium
chloromethanicum CM4]
gi|240139294|ref|YP_002963769.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
AM1]
gi|254561750|ref|YP_003068845.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
DM4]
gi|163663632|gb|ABY30999.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
PA1]
gi|218523084|gb|ACK83669.1| flagellar basal-body rod protein FlgC [Methylobacterium
chloromethanicum CM4]
gi|240009266|gb|ACS40492.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
AM1]
gi|254269028|emb|CAX24989.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
DM4]
Length = 136
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFL 53
M + IA+ S R +I++ENIANA T YR + I +F + +
Sbjct: 1 MDFLKSLGIAASGLKAQSGRMRIIAENIANADSTAQTAGGDPYR-RKIPTFTSRFDNELN 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ ++ + + A + + V E + YE N
Sbjct: 60 ASVVEAGRVRRDPTPFRTKHDPGNPAADARGEVRLPN---VNGLIENMDMREAQRSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
++ M+ +
Sbjct: 117 LNMVTATRRMISRTL 131
>gi|313901989|ref|ZP_07835405.1| flagellar basal body rod protein FlgB [Thermaerobacter
subterraneus DSM 13965]
gi|313467778|gb|EFR63276.1| flagellar basal body rod protein FlgB [Thermaerobacter
subterraneus DSM 13965]
Length = 70
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+ L+ RQ+++++N+ANA TP Y+ D+ F L
Sbjct: 9 LAAGLEVLALRQRLLAQNVANAETPGYKRYDL-DFARALEAAL 50
>gi|269961597|ref|ZP_06175959.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
gi|269833638|gb|EEZ87735.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
Length = 124
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 5/121 (4%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMARTHETHLKESDSS 68
+ S R S N+ANA + + AKD + F L+ T + S
Sbjct: 1 MSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVPVKVMGIVES 60
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
NA + V + E+ Y+ N ++ M++ +
Sbjct: 61 DKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTL 120
Query: 129 R 129
+
Sbjct: 121 Q 121
>gi|322432998|ref|YP_004210247.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
gi|321165225|gb|ADW70929.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
Length = 148
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 25/148 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M P QI+ + +R ++++ N+ANA T + ++ K++ F + + +F +
Sbjct: 1 MGPFDMLQISGSALSAERQRSEVIAANMANAETTHTDTGGPFKRKEVV-FSSASDSSFHL 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-------SG-------NTVGITNEL 100
L + G + +++ + G N V E+
Sbjct: 60 TFAKTGGLSGK-TPGTVRISQIVDDTAAPVMRYEPGHPDADKDGFVAYPAINPV---QEM 115
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
Y+LN + M+ +
Sbjct: 116 VDLMGSTRAYQLNASAVSAAKQMIQQSI 143
>gi|126668556|ref|ZP_01739510.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
gi|126626961|gb|EAZ97604.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
Length = 147
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 20/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA S R + NIANA T + YRA+ F + Q L+
Sbjct: 1 MSLGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARK-PVFAAV--QQSLL 57
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-------SGN----TVGITNELYKS 103
++ ++E+ D + G V + E+
Sbjct: 58 NGNQPAFGSGAEGGAGVRVEGIVESDADLQMRYEPNHPAASEDGYVYYPNVNVAEEMADM 117
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
+++N ++ SM+ ++
Sbjct: 118 MSSSRSFQMNVDIMNTAKSMMQRILT 143
>gi|15594638|ref|NP_212427.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi B31]
gi|195941353|ref|ZP_03086735.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a]
gi|216264936|ref|ZP_03436928.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
gi|218249308|ref|YP_002374816.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
gi|221217671|ref|ZP_03589139.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
gi|223888936|ref|ZP_03623527.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
gi|224533191|ref|ZP_03673791.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
WI91-23]
gi|224533682|ref|ZP_03674270.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
CA-11.2a]
gi|225549042|ref|ZP_03770017.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
gi|225550067|ref|ZP_03771027.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
gi|226320594|ref|ZP_03796154.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
gi|2494521|sp|Q57466|FLGC_BORBU RecName: Full=Flagellar basal-body rod protein flgC
gi|1165277|gb|AAA85616.1| FlgC [Borrelia burgdorferi]
gi|1196316|gb|AAB51408.1| flagellar basal body rod protein [Borrelia burgdorferi]
gi|2688173|gb|AAC66655.1| flagellar basal-body rod protein (flgC) [Borrelia burgdorferi B31]
gi|215981409|gb|EEC22216.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
gi|218164496|gb|ACK74557.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
gi|221192348|gb|EEE18567.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
gi|223885752|gb|EEF56851.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
gi|224511918|gb|EEF82319.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
WI91-23]
gi|224512975|gb|EEF83338.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
CA-11.2a]
gi|225369179|gb|EEG98632.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
gi|225370268|gb|EEG99706.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
gi|226234013|gb|EEH32734.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
gi|312147876|gb|ADQ30535.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi JD1]
gi|312149272|gb|ADQ29343.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi N40]
Length = 152
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVNNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
+L G + ++PL SG+ V + E+
Sbjct: 60 GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|323527715|ref|YP_004229868.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
gi|323384717|gb|ADX56808.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
Length = 141
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA T YRAK + + +
Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYRAKQVVF--AVAPLGGARTAS 62
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELN 113
+ + + + A G V E+ Y+ N
Sbjct: 63 GQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|209695764|ref|YP_002263694.1| flagellar basal body rod protein FlgC [Aliivibrio salmonicida
LFI1238]
gi|208009717|emb|CAQ80021.1| flagellar basal-body rod protein FlgC [Aliivibrio salmonicida
LFI1238]
Length = 138
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T + S A + V + E+ Y+ N
Sbjct: 61 DFTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M+ +R
Sbjct: 121 QVADAGKQMLQSTLR 135
>gi|254443396|ref|ZP_05056872.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
DG1235]
gi|198257704|gb|EDY82012.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
DG1235]
Length = 123
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 21 QKIVSENIANAST---PN---YRAKDISSFETIL----NQNFLMARTHETHLKESDSSGL 70
I+ +NIANA T P+ Y+ + + ++ +QN M ++++ +
Sbjct: 1 MDIIGQNIANAHTTRGPDGMPYQRQTVQFEAKLMELGRDQNGKMQTAQGVNVRDVVTDET 60
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ D V V +T+E+ YE N ++++ M +R
Sbjct: 61 NGPLVFNPGHPDADEKGMVQLPNVNLTHEMVDLISASRSYEANLQVVRTSKQMAQQALR 119
>gi|91776307|ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
KT]
gi|91710294|gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
KT]
Length = 135
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 11/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDISSFETILNQNFL 53
M F I+ + +R +V+ N+ANA + P YR K I +N
Sbjct: 1 MSLFNVFNISGSAMSAQGQRLNVVASNLANADSVTSSNGQP-YRTKHIVFSAVPVNAKGD 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ E + + V +T E+ Y+ N
Sbjct: 60 AQGVKVQQIVEDQAPPQLKYDPKHPLADANGYVAMPN---VNVTEEMVNMISASRSYQNN 116
Query: 114 TKLIKKLNSMVMHVVR 129
+ + SM++ +
Sbjct: 117 VETMNAAKSMLLKTLT 132
>gi|330502732|ref|YP_004379601.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
gi|328917018|gb|AEB57849.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
Length = 147
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 50/147 (34%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + S R +S NIANA T + YRA+ F T+ Q
Sbjct: 1 MSLASVFNIAGTGMSAQSTRLNTISSNIANAETVSSSLDQTYRARH-PVFATVFQQAQGG 59
Query: 55 ARTHETHLKESDSSGLHWNA-HVIEAPLDQTTGVQVS---GN--------TVGITNELYK 102
R + E D +G VIE + N V + E+
Sbjct: 60 DR--GSLFAEQDEAGRGVQVLGVIEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMAD 117
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ M+ V+
Sbjct: 118 MISASRAFQTNVEMMNTAKQMLQRVLT 144
>gi|52841452|ref|YP_095251.1| flagellar basal body rod protein FlgF [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628563|gb|AAU27304.1| flagellar basal body rod protein FlgF [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 248
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+PI + I+ +++ +RQ+I++ N+AN +TP ++A D+ +T+ N
Sbjct: 1 MEPILYNSISGSRSDF--KRQEIIANNLANINTPGFKA-DLYQAQTMYMNNANGNNQFSA 57
Query: 61 H--LKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
H + ++ + +I D + G
Sbjct: 58 HSFITQNANGIDTSPGEIITTGRDLDVAIDGDG 90
>gi|109899404|ref|YP_662659.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
T6c]
gi|109701685|gb|ABG41605.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
T6c]
Length = 140
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQN--F 52
M IAS + S R + N+ANA++ + Y+A+ F L +
Sbjct: 1 MSLFNVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARH-PVFAAELQRASQD 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
A T + +S + P+ G N V I E+ YE
Sbjct: 60 QNAGTGVQVMGIVESDAPLQIEYSPGHPMADENGYIYKPN-VNIVEEMADMMSASKAYET 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N ++ + +V+R
Sbjct: 119 NVQVADTTKRLFRNVLR 135
>gi|89092134|ref|ZP_01165089.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
gi|89083869|gb|EAR63086.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
Length = 145
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------------PNYRAKDISSFETI 47
M F IA N + R + N+ANA + P + +
Sbjct: 1 MSLSNVFGIAGSAMNAQTIRLNTTASNLANAESVSSSLDETYRARKPVFAVQQTDPLAEP 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
N+ + A L +S + P+ G N V + E+
Sbjct: 61 DNEAGIAAGRGVQVLGIVESEAELRQEYNPAHPMADEQGFVYYPN-VNVVEEMADMISAS 119
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+++NT+++ M+ +R
Sbjct: 120 RSFQINTEIMNTAKQMLQQTIR 141
>gi|188592115|ref|YP_001796713.1| flgc: flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
19424]
gi|170938489|emb|CAP63476.1| FlgC: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
19424]
Length = 122
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 9/118 (7%)
Query: 18 SERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
S+R + + N+ANA + P+ YRAK + + + E S
Sbjct: 5 SQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVQGVSEDPSPPRM 64
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ Q V + N V E+ Y+ N +++ +M++ +
Sbjct: 65 VHNPTHPMANAQGYVVMPNVNPV---EEMVNMISASRSYQANVEVLNTAKNMMLKTLT 119
>gi|197285512|ref|YP_002151384.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
gi|227356003|ref|ZP_03840395.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
gi|194682999|emb|CAR43448.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
gi|227163991|gb|EEI48893.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
Length = 134
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ + S+R + + N+AN + P+ YRAK + F+ +
Sbjct: 1 MSLFSIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVV-FQVNAPAGQDI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
H T + + + ++ + + V + E+ + Y+ N
Sbjct: 60 GGVHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPN---VDVVGEMINTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVV 128
+++ S++ +
Sbjct: 117 EVMNTAKSLMQKTL 130
>gi|225552253|ref|ZP_03773193.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
gi|225371251|gb|EEH00681.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
Length = 152
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLAAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVNNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
+L G + ++PL SG+ V + E+
Sbjct: 60 GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|146307871|ref|YP_001188336.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
gi|145576072|gb|ABP85604.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
Length = 147
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + S R +S NIANA T + YRA+ F T+ Q
Sbjct: 1 MSLASVFNIAGTGMSAQSTRLNTISSNIANAETVSSSIDQTYRARH-PVFATVFQQAQGG 59
Query: 55 ARTHETHLKESDSSGLHWNA-HVIEAPLDQTTGVQVS---GN--------TVGITNELYK 102
R + E D +G V+E + N V + E+
Sbjct: 60 DR--GSLFAEQDEAGRGVQVLGVVEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMAD 117
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ M+ V+
Sbjct: 118 MISASRAFQTNVEMMNTAKQMLQRVLT 144
>gi|319409189|emb|CBI82833.1| Flagellar basal-body rod protein flgC [Bartonella schoenbuchensis
R1]
Length = 137
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
Q+A+ + S R +I++EN+ANA++ YR K + SFE LN + T
Sbjct: 10 QVATTGLSAQSMRLRIIAENLANANSTGKSPGASPYRRKTV-SFEAALNPHSDAQGVQVT 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ +D + D V+ V E+ YE N ++++++
Sbjct: 69 RI-GNDKAPFIMRYEPGHLAADSNGYVKYP--NVNSIVEMADMREANRSYEANLQVVRQV 125
Query: 121 NSMVMHVV 128
+V +
Sbjct: 126 RDLVSQTI 133
>gi|167576660|ref|ZP_02369534.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
TXDOH]
Length = 138
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETI--LNQNF 52
M QIA + + R ++ N+ANA + YRA+ F +I L+
Sbjct: 1 MSFKDIAQIAGSAMSAQTVRLNTIASNLANADAASGAEDSTYRARK-PVFASIFQLDAQG 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
L S+ H PL G + N V E+ Y
Sbjct: 60 EPRGAAVQVLDVVKSTEPLRKVHQPGHPLADDEGNVLYPN-VNPVEEMTDMLSASRAYST 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ ++NSM + +++
Sbjct: 119 NVEVLGRVNSMQLELLK 135
>gi|146296278|ref|YP_001180049.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409854|gb|ABP66858.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 146
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 18/141 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI------SSFETIL 48
M I++ + R ++++NIANA+T YR K + SF IL
Sbjct: 1 MGMFDAINISASALHAQRVRMDVIAQNIANANTTRTEDGTPYRRKIVVFEERKQSFGDIL 60
Query: 49 NQNFLMARTHETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
N+ + ++ D+S DQ V V I E+
Sbjct: 61 NEKLNASSDTYAGVRVKAIIEDTSPFKKVYDPTHPDSDQNGYVNYP--NVDIVTEMVNMI 118
Query: 105 HIKYLYELNTKLIKKLNSMVM 125
YE N + SM+
Sbjct: 119 EASRAYEANVTAMNITKSMIT 139
>gi|300716216|ref|YP_003741019.1| cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
gi|299062052|emb|CAX59168.1| Cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
Length = 134
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA N S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALLNIFDIAGSAMNAQSQRLNVSASNLANADSVTGPDGQPYVAKQVV-FQTDAVPGSPT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + E + Y+ N
Sbjct: 60 GGVRVAQVVDDPTPAKLVYEPGNPMADAKGYVKMPN---VDVVGETVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + M+M +
Sbjct: 117 EVLNTVKQMMMKTLT 131
>gi|83647175|ref|YP_435610.1| flagellar basal body rod protein FlgC [Hahella chejuensis KCTC
2396]
gi|83635218|gb|ABC31185.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
2396]
Length = 145
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 17/140 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTH 58
+ F IA S R + N+ANA T + YRA+ ++Q+ L A
Sbjct: 5 SIFDIAGSGMTAQSVRLNTTASNLANADTASSSIDQTYRAR--KPIFAAVHQDALNAAIP 62
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-----SG----NTVGITNELYKSGHIKYL 109
+ ++ +A L++ G V + E+
Sbjct: 63 PSINDDASRGVEVRAIVESDASLERRYQPDHPMADADGYVFYPNVNVVEEMADMMSASRS 122
Query: 110 YELNTKLIKKLNSMVMHVVR 129
++ N +++ +M+ ++
Sbjct: 123 FQTNVEVLNSAKTMMQRLLT 142
>gi|329297212|ref|ZP_08254548.1| flagellar basal body rod protein FlgC [Plautia stali symbiont]
Length = 134
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ NA + P+ Y AK + F+T Q
Sbjct: 1 MALLNIFDIAGSAMTAQSQRLNVSASNLDNADSVTGPDGQPYVAKQVI-FQTDAAQGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + V + E + Y+ N
Sbjct: 60 GGVKVAGVVNDPTPAKLVYDPGNPLADQKGYVKMPN---VDVVAETVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM+M +
Sbjct: 117 EVLNTVKSMMMKTLT 131
>gi|307609978|emb|CBW99507.1| flagellar biosynthesis protein FlgF [Legionella pneumophila 130b]
Length = 248
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+PI + I+ +++ +RQ+I++ N+AN +TP ++A D+ +T+ N
Sbjct: 1 MEPILYNSISGSRSDF--KRQEIIANNLANINTPGFKA-DLYQAQTMYMNNANGNNQFSA 57
Query: 61 H--LKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
H + ++ + +I D + G
Sbjct: 58 HSFITQNANGIDTSPGEIITTGRDLDVAIDGDG 90
>gi|254463002|ref|ZP_05076418.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
HTCC2083]
gi|206679591|gb|EDZ44078.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
HTCC2083]
Length = 139
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 7/130 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMARTHE 59
F IA + R V+ NIANA A+D F+T+ A
Sbjct: 6 NVFDIAGRSMAAQMVRLNTVASNIANAEARAGSAEDAYRPLRPVFQTVFEDGMRNAERAS 65
Query: 60 THLKESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+++ + H PL G V + E+ Y+ N +++
Sbjct: 66 VEVRDVIALDREPLRVHEPGHPLADEEGYVYIA-PVDVNEEMVDMIEASRQYQNNLEVVT 124
Query: 119 KLNSMVMHVV 128
+ +++M V
Sbjct: 125 TMRTLMMRTV 134
>gi|71906389|ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
gi|71846010|gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
Length = 137
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 8/134 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M FQ++S S R + N+ANA + YRAK + T +
Sbjct: 1 MSLFNVFQVSSSAMTAQSMRLNTTASNLANADSVISADGKPYRAKQVVFEATPMGNAGDS 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ D+S D+ V V + E+ Y+ N
Sbjct: 61 SKGVRVRQIVEDASPPRLVYDPKNPAADEKGYVAFP--NVNVVEEMTNMISASRSYQTNV 118
Query: 115 KLIKKLNSMVMHVV 128
+++ +M++ +
Sbjct: 119 EVMNTAKTMLLRTL 132
>gi|149911704|ref|ZP_01900312.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Moritella sp. PE36]
gi|149805234|gb|EDM65251.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Moritella sp. PE36]
Length = 140
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 46/132 (34%), Gaps = 10/132 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQ-NFL 53
M F IA + S R + N+ANA++ + Y+A+ F+ L+Q NF
Sbjct: 1 MSLFRVFDIAGSAMSAQSVRLNTTASNLANANSVSSSAGETYKAR-YPIFQAQLDQANFS 59
Query: 54 MARTHETHLKESDSSGLHW-NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
++ S N PL G N V I E+ Y+
Sbjct: 60 QNEAVGVNVAGIVESDAPLVNEFNPNHPLADENGYVYRPN-VNIMEEMANMISASRSYQT 118
Query: 113 NTKLIKKLNSMV 124
N ++ M+
Sbjct: 119 NVQIADAAKKML 130
>gi|297617136|ref|YP_003702295.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
DSM 12680]
gi|297144973|gb|ADI01730.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
DSM 12680]
Length = 145
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 17/143 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI---------SSFE 45
M+ + F I++ R ++S N+AN +T YR + + +F+
Sbjct: 1 MRFLNAFDISASGMTAQRLRMDVISNNLANVNTTRTPQGGPYRRQMVIFEARTPSKGNFK 60
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
+L+ D+S DQ V + V + +E+
Sbjct: 61 DLLSAYMEGEGGVRVKAIREDTSPFKRVYDPGNPDADQDGYVNMP--NVNVVSEMVDMIS 118
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ SM M +
Sbjct: 119 ATRAYEANVSAVEATKSMAMKAL 141
>gi|226225740|ref|YP_002759846.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
T-27]
gi|226088931|dbj|BAH37376.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
T-27]
Length = 183
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 55/182 (30%)
Query: 1 MQPIT-FFQIASQHANWLSERQKIVSENIANAS-------TPNYRAKDI----SSFETIL 48
M+P+ IA+ + +R + +++NIANA TP Y+ +++ ++ + L
Sbjct: 1 MRPMFKSMGIAASGISAQRQRMETIAQNIANADVTRGTDGTP-YKRREVVLESATAQNAL 59
Query: 49 NQNFLMARTHETHLKESDSSGLHWN----AHVIEAPLDQTTG------------------ 86
+ + + + A + P+ TG
Sbjct: 60 FNPGNVTAQTLGNQNVAGAPAFEVPITDAAQTFQVPVLPVTGGADGVMGGEFGVRVAGVA 119
Query: 87 --------------VQVSGN------TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
GN + T EL K K +YE N + + SM+
Sbjct: 120 EDQGEGRLVYEPGHPDADGNGYVRYPDIDTTQELVKLMDAKRIYEANAAVFQTAKSMLRA 179
Query: 127 VV 128
+
Sbjct: 180 AL 181
>gi|56419752|ref|YP_147070.1| flagellar basal body rod protein FlgC [Geobacillus kaustophilus
HTA426]
gi|56379594|dbj|BAD75502.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
Length = 150
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 25/148 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDI------SSF 44
++ FQ + A+ L+ R +++ NIAN T YR K + SF
Sbjct: 1 MSLFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPRSGSF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNEL 100
L A + ++ + ++ P G G V E+
Sbjct: 61 SGYLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAG--ADGYVRLPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M+M +
Sbjct: 119 VDLIGATRSYEANVTVLNASKGMLMKAL 146
>gi|91785636|ref|YP_560842.1| flagellar basal body rod protein FlgC [Burkholderia xenovorans
LB400]
gi|296157458|ref|ZP_06840293.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
gi|91689590|gb|ABE32790.1| Flagellar basal-body rod protein FlgC [Burkholderia xenovorans
LB400]
gi|295892230|gb|EFG72013.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
Length = 141
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA T Y+AK + + L +
Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFAVSPL--GGARTAS 62
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELN 113
+ + + + A G V E+ Y+ N
Sbjct: 63 GQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|254508426|ref|ZP_05120546.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
gi|219548636|gb|EED25641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
Length = 138
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-SSFETILNQNFLMARTHE 59
M F + + S R S N+ANA + + AKD + + A+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGN 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGITNELYKSGHIKYLYELNT 114
H G+ + + A + + V + E+ Y+ N
Sbjct: 61 DHTVPVKVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 121 QVADASKQMLLRTLQ 135
>gi|220932527|ref|YP_002509435.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
168]
gi|219993837|gb|ACL70440.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
168]
Length = 145
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 20/143 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST-------------PNYRAKDISSFETILNQ 50
+ I++ R I+++NIAN +T P +R ++ SF +
Sbjct: 2 LDSLNISASGLTAQRLRMDIIADNIANVNTTRTEDGGPYRRKLPVFREREADSFARVFQS 61
Query: 51 NFLMARTHET----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
++E DS ++ + V IT E+
Sbjct: 62 KLGKDTDRRGVEVVGIREDDSPFKMVYNPGHPDANEEGYVAMPN---VNITTEMVDMISA 118
Query: 107 KYLYELNTKLIKKLNSMVMHVVR 129
YE N + +M + ++
Sbjct: 119 SRAYEANVTALNTAKNMALKALQ 141
>gi|153213630|ref|ZP_01948903.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
gi|153825350|ref|ZP_01978017.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
gi|153829337|ref|ZP_01982004.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
gi|183179563|ref|ZP_02957774.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
gi|229513843|ref|ZP_04403305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
gi|229522148|ref|ZP_04411565.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
gi|229524194|ref|ZP_04413599.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
VL426]
gi|229528796|ref|ZP_04418186.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
gi|254286492|ref|ZP_04961449.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
gi|258621047|ref|ZP_05716081.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
gi|258625275|ref|ZP_05720183.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
gi|261211324|ref|ZP_05925612.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
gi|262170823|ref|ZP_06038501.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
gi|262191691|ref|ZP_06049867.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
gi|297580845|ref|ZP_06942770.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
gi|124115829|gb|EAY34649.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
gi|148875178|gb|EDL73313.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
gi|149741034|gb|EDM55103.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
gi|150423441|gb|EDN15385.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
gi|183012974|gb|EDT88274.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
gi|229332570|gb|EEN98056.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
gi|229337775|gb|EEO02792.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
VL426]
gi|229341073|gb|EEO06078.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
gi|229349024|gb|EEO13981.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
gi|258582448|gb|EEW07289.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
gi|258586435|gb|EEW11150.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
gi|260839279|gb|EEX65905.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
gi|261891899|gb|EEY37885.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
gi|262032430|gb|EEY50992.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
gi|297534671|gb|EFH73507.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
gi|327484718|gb|AEA79125.1| Flagellar basal-body rod protein FlgC [Vibrio cholerae LMA3894-4]
Length = 138
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M + F + + S R S N+ANA + + AKD + F L++
Sbjct: 1 MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR 60
Query: 56 RTHE--THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ L +S E PL G N V + E+ Y+ N
Sbjct: 61 DPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPN-VNVMEEMANMISASRSYQTN 119
Query: 114 TKLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 120 VQVADASKQMLLRTLQ 135
>gi|297530608|ref|YP_003671883.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
gi|297253860|gb|ADI27306.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
Length = 150
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 25/148 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDI------SSF 44
++ FQ + A+ L+ R +++ NIAN T YR K + SF
Sbjct: 1 MSLFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNEL 100
L A + ++ + ++ P G G V E+
Sbjct: 61 SGYLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAG--ADGYVRLPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M+M +
Sbjct: 119 VDLIGATRSYEANVTVLNASKGMLMKAL 146
>gi|302878274|ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella
capsiferriformans ES-2]
gi|302581063|gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella
capsiferriformans ES-2]
Length = 134
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 14/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLM 54
M F +A S+R +V+ N+ANA T YRAK + M
Sbjct: 1 MSLFNIFNVAGSGMAAQSQRLNVVASNLANADSTTGADGKPYRAKQVVF------SATPM 54
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYEL 112
T +K + ++ P + VS V + +E+ Y+
Sbjct: 55 GSTDVQGVKVVRVAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQN 114
Query: 113 NTKLIKKLNSMVMHVVR 129
N ++ ++++ +
Sbjct: 115 NVDVLNTSKTLLLKTLT 131
>gi|167034946|ref|YP_001670177.1| flagellar basal body rod protein FlgC [Pseudomonas putida GB-1]
gi|166861434|gb|ABY99841.1| flagellar basal-body rod protein FlgC [Pseudomonas putida GB-1]
Length = 147
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 47/145 (32%), Gaps = 17/145 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T
Sbjct: 1 MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARH-PVFATTFQNAQAG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVI-EAPLDQTTGVQV-----SG----NTVGITNELYKSG 104
+ G+ V ++ L+ G V + E+
Sbjct: 60 GSQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMI 119
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +L+ SM+ V+
Sbjct: 120 SASRAFQTNAELMNTAKSMMQKVLT 144
>gi|187925763|ref|YP_001897405.1| flagellar basal body rod protein FlgC [Burkholderia phytofirmans
PsJN]
gi|187716957|gb|ACD18181.1| flagellar basal-body rod protein FlgC [Burkholderia phytofirmans
PsJN]
Length = 141
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA T Y+AK + + L +
Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFAVSPL--GGARTAS 62
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELN 113
+ + + + A G V E+ Y+ N
Sbjct: 63 GQQVGGVQVTGVVDDPTPMKTAYDPGNPAANSDGYVTLPNVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|323498422|ref|ZP_08103418.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
21326]
gi|323316495|gb|EGA69510.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
21326]
Length = 138
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-SSFETILNQNFLMARTHE 59
M F + + S R S N+ANA + + AKD + + A+
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGN 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGITNELYKSGHIKYLYELNT 114
H G+ + + A + + V + E+ Y+ N
Sbjct: 61 DHTVPVKVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 121 QVADASKQMLLRTLQ 135
>gi|319790422|ref|YP_004152055.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
HB-1]
gi|317114924|gb|ADU97414.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
HB-1]
Length = 135
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 7/115 (6%)
Query: 19 ERQKIVSENIANASTPN-----YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R + + N+ANA++ + YR + + FE +L++ + K +
Sbjct: 18 VRMDVAASNLANANSVDDNGQPYRRR-VPIFEAVLDEVNGVKTYRVKVKKIVEDPSPFRK 76
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ PL G N V E+ YE N +M+++ +
Sbjct: 77 IYDPSNPLAGPDGYVTLPN-VDPLREMVDMISAMRSYEANLTAFNTRKNMIVNTI 130
>gi|170737036|ref|YP_001778296.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
MC0-3]
gi|169819224|gb|ACA93806.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
MC0-3]
Length = 132
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 11/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-----YRAKDISSFETILNQNFLMA 55
M QIA + + R ++ N+ANA T YRA+ + + F
Sbjct: 1 MSFKDISQIAGSALSAQTVRLNTIASNLANAGTSGTEETAYRAR-----KPVFASVFQNG 55
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
L + H PL G+ N V E+ + N +
Sbjct: 56 GARVQVLDVIATDDALAARHEPGHPLADENGMVFYSN-VSAVEEMADMMAASRAFSTNVE 114
Query: 116 LIKKLNSMVMHVVR 129
++ ++ M ++R
Sbjct: 115 VLTRIKGMQQDLLR 128
>gi|54294164|ref|YP_126579.1| flagellar basal body rod protein FlgF [Legionella pneumophila
str. Lens]
gi|53753996|emb|CAH15467.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
Lens]
Length = 248
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+PI + I+ +++ +RQ+I++ N+AN +TP ++A D+ +T+ N
Sbjct: 1 MEPILYNSISGGRSDF--KRQEIIANNLANINTPGFKA-DLYQAQTMYMNNANGNNQFSA 57
Query: 61 H--LKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
H + ++ + +I D + G
Sbjct: 58 HSFITQNANGVDTSPGEIITTGRDLDVAIDGDG 90
>gi|59712483|ref|YP_205259.1| flagellar basal body rod protein FlgC [Vibrio fischeri ES114]
gi|197336337|ref|YP_002156702.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
gi|24459275|gb|AAL86628.1| FlgC [Vibrio fischeri ES114]
gi|59480584|gb|AAW86371.1| flagellar proximal rod protein FlgC [Vibrio fischeri ES114]
gi|197317827|gb|ACH67274.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
Length = 138
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 16/140 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKAR-----QAVFGAELSK 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGITNELYKSGHIKYL 109
A+ + H G+ + + A + + V + E+
Sbjct: 56 AKYKQDHTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRS 115
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N ++ M+ +R
Sbjct: 116 YQTNVQVADASKQMLQSTLR 135
>gi|261344144|ref|ZP_05971788.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
4541]
gi|282567736|gb|EFB73271.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
4541]
Length = 134
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I++ S+R + + N+ANA + P+ YRAK + F+ +
Sbjct: 1 MALLSIFDISASALTAQSQRLNVSASNMANAESVAGPDGQPYRAKQVV-FQMAPQGRHQV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ L E S ++ + +TVG E+ + Y+ N
Sbjct: 60 GGVRVSELIEDPSPPRMEYKPGHPLADEKGYVQMPNVDTVG---EMINTISASRSYQANL 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +
Sbjct: 117 EVMNTAKTLLQKTLT 131
>gi|163856433|ref|YP_001630731.1| flagellar basal body rod protein FlgC [Bordetella petrii DSM 12804]
gi|163260161|emb|CAP42463.1| flagellar basal-body rod protein FlgC [Bordetella petrii]
Length = 139
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 18/141 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRA+ + + N
Sbjct: 1 MSLTSIFDIAGSALQAQSQRMNVSASNLANADSAVGPDGQPYRARQV-----VFQVNPPA 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA------PLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+ + + +G+ + + PL G N V E
Sbjct: 56 GQAYGREIGGVRVAGVVQDPSPPKLIYDPSHPLANPQGYVTMPN-VDPVAETVNMIAASR 114
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
Y+ N +++ ++M +
Sbjct: 115 SYQANVEVLNTAKQLMMKTLT 135
>gi|119469948|ref|ZP_01612753.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Alteromonadales bacterium TW-7]
gi|119446658|gb|EAW27931.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Alteromonadales bacterium TW-7]
Length = 143
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 20/143 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F IA + + R + NI+NA+T YRA+ + +
Sbjct: 1 MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRAR-----QPVFAAELTK 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV---SGN------TVGITNELYKSGH 105
A ++ + S APL N V + E+
Sbjct: 56 ASESVSNNQGSSVGVKVLGIVESSAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMIS 115
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M+ +
Sbjct: 116 ASRSYETNVQVADAAKQMLSKTL 138
>gi|261341496|ref|ZP_05969354.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
ATCC 35316]
gi|288316292|gb|EFC55230.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
ATCC 35316]
Length = 141
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M ++++ + R ++ N+ANA TP Y+A+ F + + LM
Sbjct: 1 MAFSDIYRVSGSAMTAQTVRLNTIASNLANAETPAVDEGNVYKARR-PVFAAVYQNDELM 59
Query: 55 -------ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
AR + ES ++ + H A D N V E+
Sbjct: 60 SDKALSGARVQVLDVVESGNAVQRYEPHHPMANPDG-YVWYPDINVV---EEMADMMSAS 115
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM ++R
Sbjct: 116 RNFETNVDVLNNVKSMQQSLLR 137
>gi|126444366|ref|YP_001061244.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
668]
gi|134280640|ref|ZP_01767350.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
305]
gi|254299688|ref|ZP_04967137.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
406e]
gi|125657216|gb|ABN48704.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei]
gi|126223857|gb|ABN87362.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
668]
gi|134247662|gb|EBA47746.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
305]
gi|157809503|gb|EDO86673.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
406e]
Length = 138
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETI--LNQNF 52
M QIA + + R ++ N+ANA + + YRA+ F +I L+
Sbjct: 1 MSFKDIAQIAGSAMSAQTVRLNTIASNLANADSASGTEDATYRARK-PVFASIFQLDAQG 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
L S+ H PL G + N V E+ Y
Sbjct: 60 EPRGAAVQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPN-VNPVEEMTDMLSASRAYST 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ ++N M + +++
Sbjct: 119 NVEVLGRVNGMQLELLK 135
>gi|332305613|ref|YP_004433464.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172942|gb|AEE22196.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 140
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQN--F 52
M IAS + S R + N+ANA++ + Y+A+ F L +
Sbjct: 1 MSLFNVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARH-PVFAAELQRASQD 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
A T L +S + P+ G N V I E+ YE
Sbjct: 60 QNAGTGVQVLGVVESQAPLQIEYSPGHPMADENGYIYKPN-VNIVEEMADMMSASKAYET 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N ++ + +V+R
Sbjct: 119 NVQVADTTKRLFRNVLR 135
>gi|261407986|ref|YP_003244227.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
gi|329929277|ref|ZP_08283030.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
gi|261284449|gb|ACX66420.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
gi|328936646|gb|EGG33089.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
Length = 149
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 44/147 (29%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDISSFETILNQ 50
M F I + R ++S NIANA T YR K + F+
Sbjct: 1 MNISNSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVV-FQPQQES 59
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN--------TVGITNELY 101
+ R + + ++PL Q N V IT E+
Sbjct: 60 FEGLLRAQMNG-QNAGQGVKVAQVREDQSPLKQVYNPTHPDANAEGYVFMPNVDITKEMV 118
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N I +M+M +
Sbjct: 119 DMLAATRSYEANVTAINASKAMIMKAL 145
>gi|303240290|ref|ZP_07326809.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
CD2]
gi|302592200|gb|EFL61929.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
CD2]
Length = 146
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 41/143 (28%), Gaps = 16/143 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + I + R +S+NIANA+T YR + + FE +
Sbjct: 1 MGYFSSLDIGASGLTAQRLRMDTISQNIANANTTRTENGTAYR-RKVVVFEEKSSDTPFS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLD---QTTGVQVSGN------TVGITNELYKSGH 105
+E+ K + L N V I E+
Sbjct: 60 EYLNESSKKMVGGGVRVARITEDTSALKKIYDPGHPDADENGYVEMPNVDILTEMVNMIS 119
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N I SM M +
Sbjct: 120 ATRSYEANVTSINTTKSMAMKAL 142
>gi|310641541|ref|YP_003946299.1| flagellar basal-body rod protein flgc [Paenibacillus polymyxa SC2]
gi|309246491|gb|ADO56058.1| Flagellar basal-body rod protein FlgC [Paenibacillus polymyxa SC2]
Length = 150
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 42/142 (29%), Gaps = 22/142 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI------SSFETILNQ 50
F I++ R ++S NIANA T YR K + S F +L
Sbjct: 7 FDISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGFADVLKA 66
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHI 106
+ T +K S + P G V I E+
Sbjct: 67 QMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDA--DKDGYVYMPNVDIMKEMVDMISA 124
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N + +MV +
Sbjct: 125 TRSYEANVTALNASKAMVSKAL 146
>gi|260893868|ref|YP_003239965.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
gi|260866009|gb|ACX53115.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
Length = 266
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD----- 66
R +++ NIAN +T ++A ++F+ IL+Q + + T +
Sbjct: 10 SGLRVHQIRMDVIANNIANINTTGFKAAR-ANFQDILSQTLGRSAVNTTQVGLGVSLAAI 68
Query: 67 ----------SSGLHWNAHVIEAPLDQTTGVQVSGNTVG 95
++G + + V SGN+V
Sbjct: 69 DNIMTQGALQTTGRALDLAIEGNGFFVVKPVDSSGNSVN 107
>gi|120601522|ref|YP_965922.1| hypothetical protein Dvul_0472 [Desulfovibrio vulgaris DP4]
gi|120561751|gb|ABM27495.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
vulgaris DP4]
Length = 125
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG-LHWNAHVIEAPL 81
+ + NIAN +T +RA +T ++ES + G LH ++E
Sbjct: 19 VTANNIANVNTDGFRAS-----QTRYETGPGGEGVRVGEIRESTTPGPLHEGMGIVEREG 73
Query: 82 D-QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ V V G+ E+ + +E N I+ + M
Sbjct: 74 RMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHDDM 116
>gi|261419417|ref|YP_003253099.1| flagellar basal body rod protein FlgC [Geobacillus sp. Y412MC61]
gi|319766232|ref|YP_004131733.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
gi|261375874|gb|ACX78617.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC61]
gi|317111098|gb|ADU93590.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
Length = 150
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 42/148 (28%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI------SSF 44
M I++ R +++ NIAN T YR K + SF
Sbjct: 1 MSLFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNEL 100
L A + ++ + ++ P G G V E+
Sbjct: 61 SGYLQAALGRADAVDGGVQVREIVDDPAPFKLVYDPNHPDAG--ADGYVRLPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M+M +
Sbjct: 119 VDLIGATRSYEANVTVLNASKGMLMKAL 146
>gi|182680550|ref|YP_001834696.1| flagellar basal body rod protein FlgC [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636433|gb|ACB97207.1| flagellar basal-body rod protein FlgC [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 138
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
+IA S R +++SEN+AN+ + Y+ K ++ F + +++ +
Sbjct: 10 KIAGSGLEAQSTRLRVISENMANSESTGTTAGANPYQRKTVT-FSSEMDRLSGLDLVQIK 68
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ + + + A D+ + + V I E+ YE N +++K+
Sbjct: 69 SIGKDTTPFQREHDPGNPAADDKGFVKRPN---VNILIEMADMREANRSYEANLQVLKQA 125
Query: 121 NSMVMHVV 128
+ +
Sbjct: 126 RDLSTMTI 133
>gi|292487937|ref|YP_003530812.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
gi|292899156|ref|YP_003538525.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291199004|emb|CBJ46115.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291553359|emb|CBA20404.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
gi|312172058|emb|CBX80315.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
BAA-2158]
Length = 134
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + Y AK + F+T
Sbjct: 1 MALTSIFDIAGSAMAAQSQRLNVSASNLANADSATGPDGQPYVAKQVV-FQTNAAPGSPT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + E S Y+ N
Sbjct: 60 GGVRVAEVIDDPTPAKLVYEPGNPMADARGYIKMPN---VDVVAETVNSMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + M+M +
Sbjct: 117 EVLNTVKQMMMKTLT 131
>gi|307731365|ref|YP_003908589.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
gi|307585900|gb|ADN59298.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
Length = 141
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMART 57
+ F +A + S+R + + N+ANA T Y+AK + L +
Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFAVAPLGGARTGSGQ 64
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELN 113
++ + P + G V E+ Y+ N
Sbjct: 65 QVGGVQVTGVVDDPTPMKTAYDPGNPAA--NADGYVTLPNVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|167750732|ref|ZP_02422859.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
gi|167656411|gb|EDS00541.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
gi|291532066|emb|CBK97651.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum 70/3]
Length = 160
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 51/155 (32%), Gaps = 27/155 (17%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-----SSFETILN 49
M ++ IA+ R ++S+N+ANA T YR + + F ++L
Sbjct: 1 MAFLSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSENKGFNSVLE 60
Query: 50 QNFL-----MARTHETHLKESDSSGLHWNAHVIEA-----PLDQTTGVQVSGN------T 93
+ +A + + + ++E P+ T N
Sbjct: 61 ETIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPN 120
Query: 94 VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V + E + YE N ++ + SM +
Sbjct: 121 VDVAEEEMDAMAATRSYEANLAVLNAVKSMAQTAL 155
>gi|283784083|ref|YP_003363948.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
ICC168]
gi|282947537|emb|CBG87089.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
ICC168]
Length = 143
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 48/145 (33%), Gaps = 22/145 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA P Y+A+ F + N +
Sbjct: 1 MSFTDIYQISGSAMTAQTIRLNTVASNLANAEAPASSEAQAYKARS-PVFAAVYNNSLTG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLD----QTTGVQVSGN------TVGITNELYKSG 104
A H + + V+++ + N V + ++
Sbjct: 60 A-----HHRHAIDGASVQVQDVLQSGGAVKRYEPHHPMADNNGYVWYPDVNVVEQMADMM 114
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM +++
Sbjct: 115 SASRDFETNVDVLNNVKSMQQSLLK 139
>gi|51598553|ref|YP_072741.1| flagellar basal body rod protein FlgC [Borrelia garinii PBi]
gi|51573124|gb|AAU07149.1| flagellar basal-body rod protein [Borrelia garinii PBi]
Length = 152
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F ++ +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVSNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQVSGN-------------TVGITNEL 100
+L G N ++PL + V + E+
Sbjct: 60 GPFIPNYLDNGIGQGVRVVNIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ ++ SM +
Sbjct: 120 VDMISASRAYEANSTVVNSSKSMFRSAL 147
>gi|46581297|ref|YP_012105.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450718|gb|AAS97365.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
str. Hildenborough]
gi|311234961|gb|ADP87815.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
vulgaris RCH1]
Length = 125
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG-LHWNAHVIEAPL 81
+ + NIAN +T +RA +T ++ES + G LH ++E
Sbjct: 19 VTANNIANVNTDGFRAS-----QTRYETGPGGEGVRLGEIRESTTPGPLHEGMGIVEREG 73
Query: 82 D-QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ V V G+ E+ + +E N I+ + M
Sbjct: 74 RMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHDDM 116
>gi|308068650|ref|YP_003870255.1| flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
gi|305857929|gb|ADM69717.1| Flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
Length = 150
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 42/142 (29%), Gaps = 22/142 (15%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI------SSFETILNQ 50
F I++ R ++S NIANA T YR K + S F +L
Sbjct: 7 FDISASALTAQRLRMDVISSNIANAETTRAKVENGQAVPYRRKTVVLEPNQSGFADVLKA 66
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHI 106
+ T +K S + P G V I E+
Sbjct: 67 QMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDA--DKDGYVYMPNVDIMKEMVDMISA 124
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N + +MV +
Sbjct: 125 TRSYEANVTALNASKAMVSKAL 146
>gi|83716764|ref|YP_438387.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
E264]
gi|257141420|ref|ZP_05589682.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
E264]
gi|83650589|gb|ABC34653.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
E264]
Length = 138
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETI--LNQNF 52
M QIA + + R ++ N+ANA + YRA+ F +I L+
Sbjct: 1 MSFKDIAQIAGSAMSAQTVRLNTIASNLANADAASGAEDSTYRARK-PVFASIFQLDAQG 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
L S+ H PL G + N V E+ Y
Sbjct: 60 EPRGAAVQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPN-VNPVEEMTDMLSASRAYST 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ ++NSM + +++
Sbjct: 119 NVEVLGRVNSMQLELLK 135
>gi|319649569|ref|ZP_08003725.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
gi|317398731|gb|EFV79413.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
Length = 150
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 21/146 (14%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN-------YRAKDI--SSFETILNQN 51
++ F + A+ L+ R ++S N+ANA + YR K + E +
Sbjct: 1 MSMFHSMNNTASALTAQRLRMDVISSNMANADSTRSVNGDGPYRRKSVVLEPKEGQFSSF 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN--------TVGITNELYK 102
MA + + + E P N V E+
Sbjct: 61 LNMAMSRRGESSAGNGVKVSRIVEDRETPTKMVYDPTHADANEDGYVEMPNVDPLREMTD 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 121 LISATRSYEANVTVFNASKGMMMKAL 146
>gi|120554031|ref|YP_958382.1| flagellar basal body rod protein FlgC [Marinobacter aquaeolei VT8]
gi|120323880|gb|ABM18195.1| flagellar basal-body rod protein FlgC [Marinobacter aquaeolei VT8]
Length = 149
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA S R + NIANA T + YRA+ + Q L
Sbjct: 1 MSLGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDTTYRAR--KPVFAAIQQAMLN 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-------------TVGITNELY 101
+ + G I D ++ N V + E+
Sbjct: 59 PDQQGFGMGSEEGPGAGVRVEGI-VESDAELQMRYEPNHPAANEEGYVYYPNVNVVEEMA 117
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+++N ++ SM+ ++
Sbjct: 118 DMMSSSRSFQMNVDVMNTAKSMMQRILT 145
>gi|154250382|ref|YP_001411207.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
Rt17-B1]
gi|154154318|gb|ABS61550.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
Rt17-B1]
Length = 138
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 29/127 (22%)
Query: 20 RQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R +++S NIAN+ T YR + + F+ +L ++K + +G
Sbjct: 21 RIEVISTNIANSETTRTENGGPYR-RKVPVFQEVLR-----------NIKGNQENGGVMV 68
Query: 74 AHVIEAPLD-----QTTGVQVSGN------TVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ E P + T N V I E+ + + YE N I +
Sbjct: 69 KSIYEDPSEYRIVYDPTHPDADENGYVKLPNVNIVREMVDMINAQRAYEANATAINTTKA 128
Query: 123 MVMHVVR 129
M+ ++
Sbjct: 129 MINAALQ 135
>gi|148546704|ref|YP_001266806.1| flagellar basal body rod protein FlgC [Pseudomonas putida F1]
gi|148510762|gb|ABQ77622.1| flagellar basal-body rod protein FlgC [Pseudomonas putida F1]
Length = 147
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T QN
Sbjct: 1 MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARH-PVFATTF-QNAQA 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
+ + ++ ++E + + N V + E+
Sbjct: 59 GSSQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +L+ SM+ V+
Sbjct: 119 ISASRAFQTNAELMNTAKSMMQKVLT 144
>gi|20807891|ref|NP_623062.1| flagellar basal body rod protein [Thermoanaerobacter tengcongensis
MB4]
gi|20516456|gb|AAM24666.1| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis
MB4]
Length = 146
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 45/142 (31%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETI 47
M + I++ R +VS+NIANA+T YR K + SF++I
Sbjct: 1 MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSI 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHI 106
L + + + V + D VS V I E+
Sbjct: 61 LEKVKGKYTGKGVEVVQIIEDEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISA 120
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N SM +
Sbjct: 121 TRAYEANVTAFNAAKSMFQKSL 142
>gi|90408058|ref|ZP_01216229.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
gi|90310815|gb|EAS38929.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
Length = 140
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 46/138 (33%), Gaps = 11/138 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I++ + S R + N+ANA++ + YRA+ F LN+
Sbjct: 1 MSLFRILDISATGMSAQSVRLNTTASNLANANSVSSSSEKTYRARH-PVFAAELNKAKGA 59
Query: 55 ARTHETH---LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ L +S + +P G N V + E+ Y+
Sbjct: 60 LSSSGVGVKVLGIVESDAPLAREYAPNSPSADKDGFVYHSN-VNVMEEMANMISASRSYQ 118
Query: 112 LNTKLIKKLNSMVMHVVR 129
N ++ M+ ++
Sbjct: 119 TNVQIADAAKQMLSRTLQ 136
>gi|229592132|ref|YP_002874251.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
SBW25]
gi|229363998|emb|CAY51548.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
SBW25]
Length = 147
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ + Q
Sbjct: 1 MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRAR--HPVFATMFQGGQS 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
+ + + V+E + + + N V + E+
Sbjct: 59 GGSDSLFQDQGAAGSGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ +M+ V+
Sbjct: 119 ISASRSFQTNAEMMNTAKTMMQKVLT 144
>gi|190574265|ref|YP_001972110.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
K279a]
gi|190012187|emb|CAQ45810.1| putative flagellar basal-body rod protein FlgC [Stenotrophomonas
maltophilia K279a]
Length = 135
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 44/136 (32%), Gaps = 11/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F IA S R ++ N++NA T Y+ + F+ + ++N
Sbjct: 1 MSNLPIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLE-PIFQAVTSKNDPN 59
Query: 55 ART-HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + +SD++ + Q V ++ Y+
Sbjct: 60 ITSVKVKEITQSDAAPIKRYEPGHPLADGDGYIYQPD---VDPVAQMVNLISTSRNYQAG 116
Query: 114 TKLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 117 VEMLTTAKELALATLT 132
>gi|170722894|ref|YP_001750582.1| flagellar basal body rod protein FlgC [Pseudomonas putida W619]
gi|169760897|gb|ACA74213.1| flagellar basal-body rod protein FlgC [Pseudomonas putida W619]
Length = 147
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T QN
Sbjct: 1 MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARH-PVFATTF-QNAQA 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
+ + ++ +IE + + + N V + E+
Sbjct: 59 GGSQSLFEDQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +L+ +M+ V+
Sbjct: 119 ISASRAFQTNAELMNTAKNMMQKVLT 144
>gi|298507080|gb|ADI85803.1| flagellar basal body rod protein FlgF [Geobacter sulfurreducens
KN400]
Length = 242
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLKESDSSGLHWNAH 75
+R ++S N+AN +TP ++ KD +FE++L + T E+ H
Sbjct: 17 KRLDVLSNNLANVNTPGFK-KDRMTFESLLQAAGKVPQAGTTDAPVYSETAFFTDHSRGS 75
Query: 76 VIEAPLDQTTGVQVSG 91
V + + G
Sbjct: 76 VSQTGNTFDLAIDGDG 91
>gi|288962707|ref|YP_003453001.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288914973|dbj|BAI76457.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 139
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 11/129 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHE 59
+IA S R ++V+EN+ANA + YR K + SF++++++
Sbjct: 10 LKIAGAGLQAQSTRLRVVAENLANADSTATAKGGDPYRRKTV-SFDSVMDRGVGAELVRV 68
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ S A D+ + + V E+ +E + +I++
Sbjct: 69 KQIGRDRSDFQLAYDPSHPAADDKGYVKKPN---VQPLVEMMDMREAGRAFEASMNVIEQ 125
Query: 120 LNSMVMHVV 128
+M+ VV
Sbjct: 126 SRAMMTRVV 134
>gi|260767771|ref|ZP_05876706.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
gi|260617280|gb|EEX42464.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
gi|315179397|gb|ADT86311.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
Length = 138
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F + + S R S N+ANA + + AKD + F L++
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKARYNR 60
Query: 56 RTH-ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + S NA + V + E+ Y+ N
Sbjct: 61 DPNVPVKVLGIVESDKPLNAEFNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 121 QVADASKQMLLRTLQ 135
>gi|83589621|ref|YP_429630.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
39073]
gi|83572535|gb|ABC19087.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
39073]
Length = 145
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 15/142 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M+ + I++ R I++ N+AN +T YR +++ F L +
Sbjct: 1 MELLPALAISASGLTAERLRLDIIANNLANINTTRTPRGGPYR-REVPVFAERLQEAMGQ 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGN------TVGITNELYKSGHI 106
+ + P + + N + I NE+
Sbjct: 60 LPGRPSSRAPGAGVEVAAIVEDNSPPRLVYDPSHPDADANGYVHLPNINIVNEMVDMITA 119
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N ++ +M + +
Sbjct: 120 SRAYEANVTVLNAAKAMTLKAL 141
>gi|319944137|ref|ZP_08018415.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
51599]
gi|319742631|gb|EFV95040.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
51599]
Length = 149
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 22/144 (15%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMART 57
+ +A + S+R V+ N+ANA T P+ Y+A+ + F+ + + A
Sbjct: 5 MNILPLAGSALSAQSQRLNTVASNLANADTVAGPDGSVYKARQVV-FKPAMVEARQAAGA 63
Query: 58 HETHLKESDSSGLHWNAHVIEAPL-------------DQTTGVQVSGNTVGITNELYKSG 104
+ + + +S VIE P + V S V + E+
Sbjct: 64 RQWSTRGASASMGVRVVDVIEDPTPGKQTYDPKNPAANAEGYVMHS--NVNVIEEMVNMI 121
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
Y+ N +++ + + +
Sbjct: 122 SASRSYQNNVEMMNTAQQLALKTL 145
>gi|152990371|ref|YP_001356093.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
gi|151422232|dbj|BAF69736.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
Length = 136
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 10/116 (8%)
Query: 20 RQKIVSENIANASTPN-----YRAKDISSFETILNQNFLMARTHETHLK--ESDSSGLHW 72
R IV+ N+ANA++ + YR + I F+ IL++ + +K D S
Sbjct: 19 RMDIVASNMANANSIDDNGVPYR-RKIPIFQEILDKEQNRIPLSKVAIKKVVEDPSPFKL 77
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
D+ VQ+ V E+ YE N M++ +
Sbjct: 78 KYDPNNPLADENGYVQLP--NVDPLREMVDMISAMRTYEANLTAFNTHKDMLLKTI 131
>gi|83309714|ref|YP_419978.1| flagellar basal body rod protein FlgC [Magnetospirillum magneticum
AMB-1]
gi|82944555|dbj|BAE49419.1| Flagellar basal body rod protein [Magnetospirillum magneticum
AMB-1]
Length = 136
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD- 66
Q A S+R +++SEN+ANA + + + ++ + R T++ + D
Sbjct: 9 QTAISGMKVQSQRLRVISENLANADSLAQTPEGLPYRRKVMTFKNELDRATGTNVVKVDK 68
Query: 67 ---SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
S + + P G ++ N V E+ + YE N +I S+
Sbjct: 69 VRADSAEFQRRYDPKHPAADRDGYVLAPN-VNPLIEMMDMREAQRSYEANMNVINASRSL 127
Query: 124 VMHVV 128
+ +
Sbjct: 128 LSRTI 132
>gi|317406203|gb|EFV86452.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
C54]
Length = 139
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IA + S+R + + N+ANA + P+ YRA+ + F+ +
Sbjct: 1 MSLLSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGQPYRARQVV-FQVNPPAGQAL 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
R V + PL G N V E Y+
Sbjct: 60 GREIGGVRVAGVVVDQSPLKQVYDPKHPLADAQGYVSMPN-VDPVAETVNMIAASRSYQA 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ S++ +
Sbjct: 119 NVEVLNTAKSLMQKTLT 135
>gi|39998143|ref|NP_954094.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
PCA]
gi|39985089|gb|AAR36444.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
PCA]
Length = 242
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLKESDSSGLHWNAH 75
+R ++S N+AN +TP ++ KD +FE++L + T E+ H
Sbjct: 17 KRLDVLSNNLANVNTPGFK-KDRMTFESLLQAAGKVPQAGTTDAPVYSETAFFTDHSRGS 75
Query: 76 VIEAPLDQTTGVQVSG 91
V + + G
Sbjct: 76 VSQTGNTFDLAIDGDG 91
>gi|207728344|ref|YP_002256738.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
MolK2]
gi|207739739|ref|YP_002258132.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
IPO1609]
gi|206591590|emb|CAQ57202.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
MolK2]
gi|206593121|emb|CAQ60027.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
IPO1609]
Length = 168
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLM 54
M +A S+R +V+ N+ANA YRAK + +
Sbjct: 34 MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYAT 93
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ++++ + + + V + +E+ Y+ N
Sbjct: 94 GVSVDGVVEDTVTPMKRMHQPGNPLADADGYVTMPN---VDVVDEMVNMISASRSYQANV 150
Query: 115 KLIKKLNSMVMHVVR 129
++ +M +
Sbjct: 151 EVANTTKTMAAKALT 165
>gi|149202210|ref|ZP_01879183.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
gi|149144308|gb|EDM32339.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
Length = 138
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 5/129 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAS----TPNYRAKDISS-FETILNQNFLMARTHE 59
F +AS + R V+ N+ANA T + + FETI +
Sbjct: 5 NIFDVASSAMSAQMVRLNTVASNMANAQAVSTTKEEAYRPLRPVFETIYADQTGQSGLST 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
TH+ + V + V E+ + Y+ + +
Sbjct: 65 THVTDVVQLDREPVRAYRPDHPMADEEGFVYESVVNPDEEMVEMVEASRQYQNVLETVST 124
Query: 120 LNSMVMHVV 128
L +++ V
Sbjct: 125 LRTLMARTV 133
>gi|149908757|ref|ZP_01897418.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
gi|149808299|gb|EDM68238.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
Length = 261
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 30/84 (35%)
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
+ E+ SSG EA L Q + G+ V + E+
Sbjct: 176 ASFANPAGLVALGGNLYTETGSSGAAQEGVAGEASLGQIKQRGLEGSNVSVVEEMVDMIS 235
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
+ YE+N K++ + M+ V +
Sbjct: 236 TQRAYEMNAKVVSAADKMLQFVTQ 259
>gi|94266018|ref|ZP_01289739.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|94270422|ref|ZP_01291737.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93450809|gb|EAT01850.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93453413|gb|EAT03835.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 118
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 12/111 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
Q A L ++ + N+AN +T Y+ +S L T ++
Sbjct: 6 QAALSGLQALQQKNSATAHNVANVNTDGYKKVKVS----------LAETTPPGGVEARAE 55
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
V E D V+ S V + E+ + ++ N K+++
Sbjct: 56 KIDTPGPQVSEQTADGPELVEKS--NVDLAEEMPNMMLSRRYFQANLKVVQ 104
>gi|291617018|ref|YP_003519760.1| FlgC [Pantoea ananatis LMG 20103]
gi|291152048|gb|ADD76632.1| FlgC [Pantoea ananatis LMG 20103]
gi|327393469|dbj|BAK10891.1| flagellar basal-body rod protein FlgC [Pantoea ananatis AJ13355]
Length = 134
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGQPYVAKQVV-FQTDAAAGAAT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + E + Y+ N
Sbjct: 60 GGVKVAQVVDDPTPAKLVYDPGNPMADAKGYVKMPN---VDVVAETVNTMSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + SM+M +
Sbjct: 117 EVLNTVKSMMMKTLT 131
>gi|261856362|ref|YP_003263645.1| flagellar basal-body rod protein FlgC [Halothiobacillus
neapolitanus c2]
gi|261836831|gb|ACX96598.1| flagellar basal-body rod protein FlgC [Halothiobacillus
neapolitanus c2]
Length = 133
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F ++S + S R + N+ANA Y+A++ F+ ++ QN +
Sbjct: 1 MSLFSIFNVSSSAMSAQSLRLNATASNMANADAVATKPEDAYKARE-PVFQQVMEQNGGV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + PL G S N V E+ Y+ N
Sbjct: 60 GVRVSGITQSTAPNPALYEPG---NPLANKDGYVYSSN-VNPVEEMVNMLSASRSYQTNV 115
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++ + ++
Sbjct: 116 QMMDTAKNLALRTLQ 130
>gi|224825162|ref|ZP_03698268.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
gi|224602833|gb|EEG09010.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
Length = 136
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA S R +V+ NIANA + Y+ + + ++
Sbjct: 1 MSLSNVFTIAGSALTAQSMRLNVVASNIANAESATSSTGQPYQGRHVVFTAIPVSATQPQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
D++ DQ V + V E+ Y+ N
Sbjct: 61 VAGVRVTSVVEDTTPPRLKYDPGNPLADQRGYVNLP--NVNPVEEMADMISAARSYQTNV 118
Query: 115 KLIKKLNSMVMHVVR 129
+L+ +++ ++
Sbjct: 119 ELMNTAKNLLQKTLQ 133
>gi|326204628|ref|ZP_08194484.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
DSM 2782]
gi|325985195|gb|EGD46035.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
DSM 2782]
Length = 147
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 15/143 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M + I++ R +S+NIANA+T YR +++ +SF
Sbjct: 1 MGIFSALDISASGLTAQRVRMDTISQNIANANTTRTADGTPYRRREVVFEERSDSNSFSQ 60
Query: 47 IL-NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
L N + + + + + D V+ V I E+
Sbjct: 61 ALENASSKLNGGNGVRVSSIVEDPTDFKKVYDPGHPDADAEGYVNMPNVDIVTEMVNMIS 120
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 121 ATRSYEANVTSVNATKSMALKAL 143
>gi|285018211|ref|YP_003375922.1| flagellar basal body rod protein [Xanthomonas albilineans GPE PC73]
gi|283473429|emb|CBA15934.1| probable flagellar basal body rod protein [Xanthomonas albilineans]
Length = 135
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 14/136 (10%), Positives = 41/136 (30%), Gaps = 11/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILN-QNFL 53
M + F +A S R ++ N+ANA + Y+ + F+ + + +
Sbjct: 1 MSNLPIFDVAGSALQAQSVRMSTIASNLANADSVAGSAEAAYKPIE-PIFQAVRDPHDSA 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + + +S + + V ++ Y+
Sbjct: 60 LTGVNVKEISQSKDPPIKRYEPGHPLADADGYIYSPDIDPVS---QMVNLISASRNYQAG 116
Query: 114 TKLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 117 VEVLNTAKELALSTLT 132
>gi|209521587|ref|ZP_03270285.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
gi|209497970|gb|EDZ98127.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
Length = 141
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 12/136 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAS-TPN-----YRAKD----ISSFETILNQNFL 53
+ F +A + SER + + N+ANA T Y+AK ++ + +
Sbjct: 5 MNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVVFAVNPLGGARSGSGQ 64
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ D S + + V + V E+ Y+ N
Sbjct: 65 QVGGVQVTGVVDDPSPMKTAYEPGNPAANADGYVTLP--NVDPVQEMVNMISASRSYQAN 122
Query: 114 TKLIKKLNSMVMHVVR 129
+ + ++++ +
Sbjct: 123 VETLNTAKTLMLKTLT 138
>gi|188534172|ref|YP_001907969.1| flagellar basal body rod protein FlgC [Erwinia tasmaniensis Et1/99]
gi|188029214|emb|CAO97086.1| Cell-proximal portion of basal-body rod [Erwinia tasmaniensis
Et1/99]
Length = 134
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALLNIFDIAGSAMAAQSQRLNVSASNLANADSVTGPDGQPYVAKQVV-FQTNAAPGSAA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + + V + E + Y+ N
Sbjct: 60 GGVKVAEVIDDPAPARLVYEPGNPMADAKGYVKMPN---VDVVAETVNTLSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + M+M +
Sbjct: 117 EVLNTVKQMMMKTLT 131
>gi|168187557|ref|ZP_02622192.1| flagellar basal-body rod protein FlgB [Clostridium botulinum C str.
Eklund]
gi|169294586|gb|EDS76719.1| flagellar basal-body rod protein FlgB [Clostridium botulinum C str.
Eklund]
Length = 134
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTH 58
+ + + Q N S+R+ +++ NI+N +T Y+ + +FE L + + T+
Sbjct: 8 ESSQSYNLIKQALNATSKRKNVINNNISNINTRGYK-RSYVTFEDTLKNSKDKLELKTTN 66
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE-LNTKLI 117
E H+ + G I DQ+ +++ N V I NE+ Y L T L
Sbjct: 67 EKHIAFNKKFGE------ISVKKDQSDSMKMDENNVDIDNEMTNLAANTLEYNALITSLN 120
Query: 118 KK 119
Sbjct: 121 SA 122
>gi|194365682|ref|YP_002028292.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
R551-3]
gi|254521317|ref|ZP_05133372.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
gi|194348486|gb|ACF51609.1| flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia
R551-3]
gi|219718908|gb|EED37433.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
Length = 135
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 44/136 (32%), Gaps = 11/136 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F IA S R ++ N++NA T Y+ + F+ + ++N
Sbjct: 1 MSNLPIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLE-PIFQAVTSKNDPN 59
Query: 55 ART-HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + +S+++ + Q V ++ Y+
Sbjct: 60 ITSVKVKEITQSEAAPIKRYEPGHPLADADGYIYQPD---VDPVAQMVNLISTSRNYQAG 116
Query: 114 TKLIKKLNSMVMHVVR 129
+++ + + +
Sbjct: 117 VEMLTTAKELALATLT 132
>gi|68164544|gb|AAY87273.1| predicted flagellar basal body rod protein [uncultured bacterium
BAC17H8]
Length = 262
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKES 65
+A N R +I++ N+AN +T ++ +D ++FET+L Q +A T E +L S
Sbjct: 8 VAKTGLNAQQTRMQIIANNLANVNTTGFK-RDRANFETLLYQVRRVAGDQVTAEANLTSS 66
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
S G + Q + + N++ + E
Sbjct: 67 FSVGTGARIVNTQKAHTQGSLITTD-NSLDLALE 99
>gi|308050026|ref|YP_003913592.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
9799]
gi|307632216|gb|ADN76518.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
9799]
Length = 138
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 7/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M + +QIA N S R V+ N+ANA YRA F+T+ Q
Sbjct: 1 MSFVDIYQIAGSAMNVQSIRLNTVASNLANAEAAAPDEASAYRAIK-PVFQTLYEQGNGG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + S + V+ + V E+ +E +
Sbjct: 60 GVSANVQIAGVVQSDAPLESRYEPDHPMANEQGYVTYSNVNTVQEMADMMAATRAFETSV 119
Query: 115 KLIKKLNSMVMHVVR 129
++ + SM +++
Sbjct: 120 DIMSRARSMQQGLLK 134
>gi|183598615|ref|ZP_02960108.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
gi|188020794|gb|EDU58834.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
Length = 134
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F I++ S+R + + N+ANA + P+ +RAK + F+ +
Sbjct: 1 MALLSIFDISASALTAQSQRLNVSASNMANAESVVGPDGEPFRAKQVV-FQMTPQGRNGV 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ L E + ++ + V + E+ + Y+ N
Sbjct: 60 GGVRVSQLIEDPTPPRMEYKPGHPLADEKGYVRMPN---VDMVGEMINTISASRSYQANL 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +
Sbjct: 117 EVMNTAKTLLQKTLT 131
>gi|149182501|ref|ZP_01860974.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
gi|148849761|gb|EDL63938.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
Length = 153
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 52/151 (34%), Gaps = 28/151 (18%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDISS------F 44
++ F + A+ LS R ++S N+ANA T YR K + F
Sbjct: 1 MSIFHSMNTSASALSAQRLRMDVISSNMANADTTRGKLVDGEWQPYRRKSVVFQPNGGQF 60
Query: 45 ETILNQNFLMARTHE-------THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
+ LN+ + + +KE + + + +Q VQ+ V
Sbjct: 61 SSFLNKAMNTKDSGSLGNGVKVSEIKEDEETPFNLVYDPEHPDANQDGYVQMP--NVDPL 118
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N + SM+M +
Sbjct: 119 REMIDLISATRSYEANVTVFNANKSMMMKSL 149
>gi|332702980|ref|ZP_08423068.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
Walvis Bay]
gi|332553129|gb|EGJ50173.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
Walvis Bay]
Length = 147
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 19/145 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M +T +A+ + I+S N+AN +T YR K + S F++
Sbjct: 1 MDFMTALDVAASGLTAKRTQLNIISSNLANINTTRTAEGGPYRRKTVVFQTTGTRSPFDS 60
Query: 47 ILNQNFL--MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
+ + +H+ + + N + N V E+
Sbjct: 61 AMMDAMERELKGVKISHITKDNRPFKIVNDPGHPDADEFGNVRFPDINVV---EEMAHMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVR 129
YE N ++ + SM ++
Sbjct: 118 TAMRSYEANAASVESIKSMFSKALQ 142
>gi|302338075|ref|YP_003803281.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
11293]
gi|301635260|gb|ADK80687.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
11293]
Length = 152
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 41/148 (27%), Gaps = 20/148 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSF--E 45
M + +A+ + R +VS+NIANAST +RA++ +
Sbjct: 1 MGLFSSINVAATGMSAQRLRLDVVSDNIANASTARTPEGGPFRRSRVIFRARNSQPYWRS 60
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGITNEL 100
L + V + V I E+
Sbjct: 61 PFLPTALDNGVGRGVRVASVQKDMDAKPKLVYDPTHPDAIQTGPKKGYVEMPNVNIVEEM 120
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ +M M +
Sbjct: 121 VDMMSASRSYEANVAVVNGSKAMFMRAL 148
>gi|94266975|ref|ZP_01290624.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93452330|gb|EAT02961.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 118
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 12/111 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
Q A L ++ + N+AN +T Y+ +S L T ++
Sbjct: 6 QAALSGLQALQQKNSATAHNVANVNTDGYKKVKVS----------LAETTPPGGVEARAE 55
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
V E D V+ S V + E+ + ++ N K+++
Sbjct: 56 KIDTPGPQVSEQTADGPELVEKS--NVDLAEEMPNMMLSRRYFQANLKVVQ 104
>gi|87119678|ref|ZP_01075575.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
gi|86165154|gb|EAQ66422.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
Length = 149
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F I+ + + R V+ NIANA + YRA+ F T++ ++
Sbjct: 1 MSLNNIFAISGSAMSAQTIRLNTVASNIANADSVASSEDQTYRARK-PVFSTMMQESMRG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIE--APLDQTTGVQV-----SG----NTVGITNELYKS 103
++ E + ++E APL SG + V E+
Sbjct: 60 YGWNDVSNDEFGAGVGVEVKGIVESDAPLQPRYEPDHPMANESGYVYYSNVNPVEEMADM 119
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ SM+ ++
Sbjct: 120 MSASRSFQTNVEVMNSAKSMMQKMLT 145
>gi|304392508|ref|ZP_07374448.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
gi|303295138|gb|EFL89498.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
Length = 138
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFLMARTHET 60
++AS S+R ++VS+NIANA + + Y+ K I+ F + L+Q
Sbjct: 9 KVASSGLAAQSQRLEVVSQNIANAQSTSRVAGGEPYQRKTIT-FTSALDQANAAQMVDVD 67
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ D S D V++ V + E+ YE N +++K++
Sbjct: 68 KIGR-DPSSFSAKFDPSSPGADAKGMVKMP--NVNVLVEMADMRDANRAYESNLQVMKQV 124
Query: 121 NSMVMHVV 128
MV +
Sbjct: 125 QDMVTATI 132
>gi|311694359|gb|ADP97232.1| flagellar basal-body rod protein FlgC-like protein [marine
bacterium HP15]
Length = 149
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 20/147 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA S R + NIANA T + YRA+ + + Q+ +
Sbjct: 1 MSLGSIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRAR--KPVFSAIQQSLMN 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTT--------GVQVSG----NTVGITNELYK 102
+ + G I + G V + E+
Sbjct: 59 PGQGGLPMAADEGPGAGVRVDGIVESDAELQMRYEPHHPAANEDGYVFYPNVNVVEEMAD 118
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
+++N ++ SM+ ++
Sbjct: 119 MMSSSRSFQMNVDVMNTAKSMMQRILT 145
>gi|257095361|ref|YP_003169002.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047885|gb|ACV37073.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 134
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 10/123 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + FQ+A S R V+ N+ANA + YRAK + T + +
Sbjct: 1 MSILNAFQVAGSALTAQSLRLNAVASNLANADSVVGSDGKPYRAKQVVFVATPM-GSPAA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E S G A D+ + N V E+ Y+ N
Sbjct: 60 EGVRVKQVVEDSSPGRRVYDPRNPAADDRGYVTMPNVNVVD---EMTNMISASRSYQTNV 116
Query: 115 KLI 117
+++
Sbjct: 117 EVM 119
>gi|167567748|ref|ZP_02360664.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
EO147]
gi|167574699|ref|ZP_02367573.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
C6786]
Length = 138
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 18/141 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILN--QNF 52
M QIA + R ++ N+ANA + YRA+ F +I +
Sbjct: 1 MSFKDIAQIAGSAMAAQTVRLNTIASNLANADAASSTEASTYRARK-PVFASIFKVGADG 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKY 108
+ L S+ H PL GN V E+
Sbjct: 60 EVNGAAVQVLDVVQSTEPLRKVHQPGNPLAD-----ADGNVLYPNVDPVEEMTDMLSSTR 114
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
Y N +++ ++N M M +++
Sbjct: 115 AYSTNVEVLGRVNGMQMELLK 135
>gi|167626153|ref|YP_001676447.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
HAW-EB4]
gi|167356175|gb|ABZ78788.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
HAW-EB4]
Length = 139
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN----ASTPNYRAKDISSFETILNQNFLMAR 56
M +QIA N + R V+ N+AN A +P+ + + + + + +
Sbjct: 1 MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDEAFRALKPVFSTIYKQTQEGQ 60
Query: 57 THETHLKESDSSGLHWNAHVIEAPL----DQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
H++ S + P D+ V S V E+ +E
Sbjct: 61 VAGAHVEVSAIVQSDAPLDLRYEPDHPYADEQGYVAYS--NVNTVEEMADMMAASRSFET 118
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ + SM +++
Sbjct: 119 NVEIMNRARSMQQGLLQ 135
>gi|94495413|ref|ZP_01301993.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
gi|94424801|gb|EAT09822.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
Length = 138
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 11/132 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANA-STPN-----YRAKDISSFETILNQNFLMART 57
+ F IA + + R + N+ANA + YRA + +
Sbjct: 9 MNIFDIAGRAMSAQLVRLNTTASNMANAGNVTGSAQDAYRAIKPVFTSVTDSPGVSTVKV 68
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ +++ + H H + V N EL +Y+ N +++
Sbjct: 69 SDVVTTKAEPTKRHDPNHPLADANGDVWEAAVDSNA-----ELVDMIETARMYQNNVQVL 123
Query: 118 KKLNSMVMHVVR 129
S+++ +R
Sbjct: 124 NTAKSLMLETIR 135
>gi|218506431|ref|ZP_03504309.1| hypothetical protein RetlB5_01904 [Rhizobium etli Brasil 5]
Length = 30
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 25 SENIANASTPNYRAKDISSFET 46
+ NIANA+TP +RAKD++ F+
Sbjct: 7 AGNIANANTPKFRAKDVTPFDA 28
>gi|311105933|ref|YP_003978786.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
A8]
gi|310760622|gb|ADP16071.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
A8]
Length = 139
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 16/140 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F IA + S+R + + N+ANA + P+ YRA+ + + N
Sbjct: 1 MSLLSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGKPYRARQV-----VFQVNPPA 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQ-----TTGVQVSGNTVGITNELYKSGHIKYL 109
+ + +G+ + ++ D VS V E
Sbjct: 56 GQALGQEIGGVRVAGVIEDQSPLKQVYDPQHPLADAQGYVSMPNVDPVAETVNMIAASRS 115
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N +++ +++ +
Sbjct: 116 YQANVEVLNTAKALMQKTLT 135
>gi|302392398|ref|YP_003828218.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
5501]
gi|302204475|gb|ADL13153.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
5501]
Length = 145
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 13/135 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANAST-------------PNYRAKDISSFETILNQNFLM 54
++S R ++S NIAN +T P ++AK+ F +
Sbjct: 8 NVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKKKSPVFKAKNDQGFSLPNSDAQSN 67
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ S D V + I +E+ YE N
Sbjct: 68 QVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYVEMPNIDIASEMVDMVSASRAYEANV 127
Query: 115 KLIKKLNSMVMHVVR 129
+ M ++
Sbjct: 128 TALNTSKQMAKSALK 142
>gi|91794997|ref|YP_564648.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
OS217]
gi|91716999|gb|ABE56925.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
OS217]
Length = 139
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIAN----ASTPNYRAKDISSFETILNQNFLMARTHETH 61
+QIA N + R V+ NIAN A TP + + + + F T
Sbjct: 6 IYQIAGAGMNAQTIRLNTVASNIANAGTAAETPEEAYRALKPVFATVYEQFQQNATSGAS 65
Query: 62 LKESDSSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
++ D + P +Q + NTV E+ +E + ++
Sbjct: 66 VEVMDIVQTSAPLDLRYEPNHPYADEQGYVAYSNVNTVD---EMADMMAASRSFETSVEI 122
Query: 117 IKKLNSMVMHVVR 129
+ + SM +++
Sbjct: 123 MNRARSMQQGLLQ 135
>gi|188586015|ref|YP_001917560.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350702|gb|ACB84972.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 146
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 43/143 (30%), Gaps = 22/143 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I+ R ++S NIANA+T R +D + + ++ HL
Sbjct: 3 DTFDISGSGLTAERLRMDVISNNIANANTT--RTEDGEPYRRQMPVFETRGKSFSDHLHS 60
Query: 65 SDSSGLHWNAHVIEAP-------------------LDQTTGVQVSGNTVGITNELYKSGH 105
+++ + D TG N V I E+
Sbjct: 61 FLQKDGDFDSQGVRVSSIEEDDSPFKEIYDPEHPEADPETGYVQKPN-VEIVKEMTDMIT 119
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N I SM + +
Sbjct: 120 ASRAYEANATAIDNAKSMASNTL 142
>gi|289578436|ref|YP_003477063.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
Ab9]
gi|297544712|ref|YP_003677014.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528149|gb|ADD02501.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
Ab9]
gi|296842487|gb|ADH61003.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 147
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 43/147 (29%), Gaps = 24/147 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETI 47
M + I++ R ++S+NIAN +T YR K + SFE+I
Sbjct: 1 MNLFSSMDISASGLTAERVRMDVISQNIANVNTTRTSQGGPYRRKLVVLKEIQPDSFESI 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELY 101
L++ + + V N V I +E+
Sbjct: 61 LDKVKGKYSGKGVEVVQIAEDDQTPLREVY-----DPGHPDADQNGYVEYPNVNIVSEMV 115
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N +M +
Sbjct: 116 DMISATRAYEANVTAFNASKAMFQKSL 142
>gi|238796902|ref|ZP_04640406.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
43969]
gi|238719162|gb|EEQ10974.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
43969]
Length = 121
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 10/118 (8%)
Query: 18 SERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
S+R + + N+ANA + P+ YRA+ + F+ + + ES
Sbjct: 5 SKRLNVSASNMANADSIAGPDGQPYRARQVI-FQVDSAPGQEIGGVRVGDVVESTEPDRM 63
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
D+ + N V E+ + Y+ N +++ SM++ +
Sbjct: 64 VYEPANPLADDKGYVRMPNVNVVS---EMVNTISASRSYQANVEVMNTAKSMMLKTLT 118
>gi|88858145|ref|ZP_01132787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas tunicata D2]
gi|88819762|gb|EAR29575.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Pseudoalteromonas tunicata D2]
Length = 140
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 13/138 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F I++ + S R + N++NA++ + YRA+ F L +
Sbjct: 1 MSLFNVFDISATGMSAQSVRLNTTASNMSNANSVSSSIDQTYRARH-PVFAAELTKAAAS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLY 110
+ +K + P G + V + E+ Y
Sbjct: 60 QQGESVGVKVLGIVESDKPLQIEFNPTHP--MADKDGFIYKSNVNVVEEMANMISASRAY 117
Query: 111 ELNTKLIKKLNSMVMHVV 128
+ N +L SM+ +
Sbjct: 118 QTNVQLADAAKSMLSKTI 135
>gi|32490788|ref|NP_871042.1| hypothetical protein WGLp039 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165994|dbj|BAC24185.1| flgC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 133
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F I+ S R + + N+ANA + P Y +K + F+ N +
Sbjct: 1 MSLLNIFDISGSALIAQSCRLNVSASNMANAESLSNNGNP-YSSKQVV-FKLNTNFAQEI 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E + PL + G S N V + +E+ + Y+ N
Sbjct: 59 GGVKVKKIIEDKTPWKILYDPG--NPLADSKGYVKSSN-VNMISEMINTISSSRSYQANV 115
Query: 115 KLIKKLNSMVMHVVR 129
++I SM++ +
Sbjct: 116 EVINTARSMILKTLT 130
>gi|288554368|ref|YP_003426303.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
gi|288545528|gb|ADC49411.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
Length = 272
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTHETHLKESDS 67
A+ +RQ++++ N+ANA+TP Y+A + +F +L +
Sbjct: 8 AAAGMIAQQQRQEMLTNNLANANTPGYKADQASLRAFPNMLIKAMDTQGPKGAS-APIIG 66
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
P + + +GN+ I
Sbjct: 67 ELATGVYLQERMPNFRQGDINETGNSTDI 95
>gi|74317654|ref|YP_315394.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
ATCC 25259]
gi|74057149|gb|AAZ97589.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
ATCC 25259]
Length = 134
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 10/123 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F +A N S+R V+ N+ANA + Y+AK + + N
Sbjct: 1 MSLFNIFNVAGSAMNAQSQRLNTVASNLANADSATSANGQPYKAKQVVFAAAPVGDN--- 57
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
T D + + PL G N V + E+ Y+ N
Sbjct: 58 GATGVNVAAVIDDPSPMKTVYDPKNPLADDKGYVTMPN-VNVVEEMVNMISASRSYQSNV 116
Query: 115 KLI 117
+++
Sbjct: 117 EMM 119
>gi|167037671|ref|YP_001665249.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040332|ref|YP_001663317.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
gi|256750738|ref|ZP_05491623.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
ethanolicus CCSD1]
gi|300914416|ref|ZP_07131732.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
gi|307264864|ref|ZP_07546426.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
Rt8.B1]
gi|307724348|ref|YP_003904099.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
gi|320116086|ref|YP_004186245.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389485|ref|ZP_08211052.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
ethanolicus JW 200]
gi|166854572|gb|ABY92981.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
gi|166856505|gb|ABY94913.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750321|gb|EEU63340.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
ethanolicus CCSD1]
gi|300889351|gb|EFK84497.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
gi|306920122|gb|EFN50334.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
Rt8.B1]
gi|307581409|gb|ADN54808.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
gi|319929177|gb|ADV79862.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994490|gb|EGD52915.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
ethanolicus JW 200]
Length = 147
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 43/147 (29%), Gaps = 24/147 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETI 47
M + I++ R I+++NIAN +T YR K + SFE+I
Sbjct: 1 MNLFSSMDISASGLTAERLRMDIIAQNIANVNTTRTVQGGPYRRKLVVLKEIQPDSFESI 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELY 101
L++ + + V N V I +E+
Sbjct: 61 LDKVKGKYSGKGVEVVQIAEDDQTPLREVY-----DPGHPDADQNGYVEYPNVNIVSEMV 115
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N +M +
Sbjct: 116 DMISATRAYEANVTAFNASKAMFQKSL 142
>gi|329901228|ref|ZP_08272753.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
IMCC9480]
gi|327549160|gb|EGF33752.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
IMCC9480]
Length = 122
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 9/122 (7%)
Query: 14 ANWLSERQKIVSENIANAS----TPN--YRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ ++R +V+ NIANA T Y+AK + F + A + D+
Sbjct: 1 MSAQAQRLNVVASNIANADSTTSTNGQVYKAKQVV-FSAVPVGGDAAASGVKVDKVLEDT 59
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ D+ V + V + E+ Y+ N + + ++++
Sbjct: 60 AAPRLVYDPKHPQADEKGYVSMP--NVNVVEEMVNMISASRSYQTNVETMNAAKTLLLKT 117
Query: 128 VR 129
+
Sbjct: 118 LT 119
>gi|332187874|ref|ZP_08389607.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
gi|332012035|gb|EGI54107.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
Length = 136
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 8/133 (6%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
P++ FQ++ + + R + N+ANA A + + + F + T
Sbjct: 4 GPLSIFQVSGRAMSAQLVRMNTTASNLANA---GGIAGSVETAYKTMKPVFRTSFDAATG 60
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTG-VQVSGN----TVGITNELYKSGHIKYLYELNTKL 116
L D + D GN V T EL Y+ N ++
Sbjct: 61 LSTVDVEKIVTAGEDPTKRHDPNNPLADKDGNVFEAAVDETRELVDMMETARTYQNNVEV 120
Query: 117 IKKLNSMVMHVVR 129
++ S+++ ++
Sbjct: 121 MQTAKSLILDTLK 133
>gi|327480018|gb|AEA83328.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
4166]
Length = 147
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAK-----------DISS 43
M + F IA + S R +S NIANA T + YRA+ +
Sbjct: 1 MSLSSVFNIAGSGMSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQANGQP 60
Query: 44 FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
+++ + D S L D+ V V + E+
Sbjct: 61 DQSLFAGQDQAGVGVQVLGVVEDQSELQARYEPNHPAADEAGYVYYP--NVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +L+ +M+ V+
Sbjct: 119 ISASRAFQTNAELMNTAKTMLQKVLT 144
>gi|82702451|ref|YP_412017.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
ATCC 25196]
gi|82410516|gb|ABB74625.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
ATCC 25196]
Length = 139
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 7/136 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFE-TILNQNFL 53
M F +A ++R +V+ N+ANA + Y+AK + + L N +
Sbjct: 1 MSLFNIFTVAGSAMTAQNQRLNVVASNLANADSAASSNGQPYKAKQVVFMSTSPLGDNGI 60
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
TH + + V+ V + E+ Y+ N
Sbjct: 61 SNGTHGVRVSGVIEDQSPMKMVYEPSHPMANPEGFVTMPNVNVVEEMVDMISASRSYQNN 120
Query: 114 TKLIKKLNSMVMHVVR 129
++ ++++ +
Sbjct: 121 VDMMNTAKTLLLKTLT 136
>gi|283834457|ref|ZP_06354198.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
29220]
gi|291070004|gb|EFE08113.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
29220]
Length = 143
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 22/145 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M +QI+ + R V+ N+ANA +P Y+A+ F + N + +
Sbjct: 1 MSFTDIYQISGSAMTAQTIRLNTVASNMANAESPASSEAQAYKARS-PVFAAVYNNSLI- 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLD----QTTGVQVSGN------TVGITNELYKSG 104
H + + V+++ + N V + ++
Sbjct: 59 ----GGHNRHAIDGASVQVQDVMQSGGAVKRYEPHHPMADQNGFVWYPDVNVVEQMADMM 114
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVR 129
+E + ++ + SM +++
Sbjct: 115 SASRDFETDVDVLNNVKSMQQSLLK 139
>gi|224531802|ref|ZP_03672434.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
gi|224511267|gb|EEF81673.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
Length = 152
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVNNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQVSGN-------------TVGITNEL 100
+L G + ++PL + V + E+
Sbjct: 60 GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|304404242|ref|ZP_07385904.1| flagellar basal-body rod protein FlgC [Paenibacillus
curdlanolyticus YK9]
gi|304347220|gb|EFM13052.1| flagellar basal-body rod protein FlgC [Paenibacillus
curdlanolyticus YK9]
Length = 149
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 34/145 (23%), Gaps = 17/145 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST--PNYRAKDISS--------------F 44
M+ F + R ++S NIANA T Y F
Sbjct: 1 MRLSNGFDANASALTAQRLRMDVISSNIANAETTRAGYVNGKFVPYTRKMVVMEPANKSF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKS 103
+L+ + V D VS V I E+
Sbjct: 61 SDVLSGQMNGTAANPGVKVTKIVEDKTPPKLVYNPSHPDADEFGYVSMPNVDIAKEMIDM 120
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M +
Sbjct: 121 ISASRSYEANITALNATKGMFAKAL 145
>gi|104782845|ref|YP_609343.1| flagellar basal body rod protein FlgC [Pseudomonas entomophila L48]
gi|95111832|emb|CAK16556.1| flagellar cell-proximal portion of basal-body rod FlgC [Pseudomonas
entomophila L48]
Length = 147
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T Q
Sbjct: 1 MSLASVFNIAGSGMSAQNTRLNTVASNIANAETVSSSLDQTYRARH-PVFATTFQQAQGG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
+ ++ +IE + + + N V + E+
Sbjct: 60 VGQSLFE-DQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +L+ +M+ V+
Sbjct: 119 ISASRAFQTNAELMNTAKTMMQKVLT 144
>gi|291613036|ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
ES-1]
gi|291583148|gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
ES-1]
Length = 134
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M F IA S+R +V+ N+AN + P+ Y+AK + F T+ +
Sbjct: 1 MSLFNIFNIAGSAMTAQSQRLNVVASNLANVDSATGPDGKPYKAKQVV-FSTVPITGQVG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E +S Q + N V E+ Y+ N
Sbjct: 60 EGVKVAAVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVD---EMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
++ +++ +
Sbjct: 117 DVLNTSKTLLTKTLT 131
>gi|309779445|ref|ZP_07674206.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
gi|308921686|gb|EFP67322.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
Length = 135
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLM 54
M +A S+R +V+ N+ANA YRAK + + ++
Sbjct: 1 MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGKAYRAKQVVFSPAQESDDYAT 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ++++ + + + V + +E+ Y+ N
Sbjct: 61 GVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPN---VDVVDEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
++ +M +
Sbjct: 118 EVANTTKTMASKALT 132
>gi|77165836|ref|YP_344361.1| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707]
gi|254434083|ref|ZP_05047591.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani
AFC27]
gi|76884150|gb|ABA58831.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
gi|207090416|gb|EDZ67687.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani
AFC27]
Length = 261
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESD 66
IA + R +S N+AN +T ++ +D + FE +L Q A++ + L S
Sbjct: 7 IAKTGLDAQQTRMATISNNLANVNTTGFK-RDRAVFEDLLYQTVRQPGAQSSQNTLLPSG 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
V L G+ +GN++ + +
Sbjct: 66 LMLGTGVRTVATEKLFTQGGLTQTGNSLDMAIQ 98
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 28/80 (35%)
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ T KE+ SSG+ + + G V + EL +
Sbjct: 180 NPAGLQPTGNNLFKETASSGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRA 239
Query: 110 YELNTKLIKKLNSMVMHVVR 129
YE+N+K I + M+ +
Sbjct: 240 YEMNSKAISSTDEMLRFATQ 259
>gi|54297183|ref|YP_123552.1| flagellar basal body rod protein FlgF [Legionella pneumophila
str. Paris]
gi|53750968|emb|CAH12379.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
Paris]
Length = 248
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+PI + ++ +++ +RQ++++ N+AN +TP ++A D+ +T+ N
Sbjct: 1 MEPILYKAVSGGRSDF--KRQEMIANNLANINTPGFKA-DLYQAQTMYMNNANGNNQFNM 57
Query: 61 H--LKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
H + ++ + +I D + G
Sbjct: 58 HSFITQNTNGVDTSPGEIITTGRDLDVAIDGDG 90
>gi|315125982|ref|YP_004067985.1| LfgC [Pseudoalteromonas sp. SM9913]
gi|315014496|gb|ADT67834.1| LfgC [Pseudoalteromonas sp. SM9913]
Length = 138
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQN--F 52
M + + + R ++ N+ANA T Y+A F + Q
Sbjct: 1 MSFNSIYDASGSAMRAQVIRLDTIASNLANADTAAGSEADAYKALK-PVFSALYKQTQDS 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
L ++S+ + P+ G N V E+ Y+
Sbjct: 60 QSISASVDVLGITESNRAVEQRYEPNNPIANNDGYVFYSN-VNALEEMADMMSASRSYQT 118
Query: 113 NTKLIKKLNSMVMHVVR 129
+ +++ ++NSM +++
Sbjct: 119 SVEVMGRVNSMQQSILK 135
>gi|26991079|ref|NP_746504.1| flagellar basal body rod protein FlgC [Pseudomonas putida KT2440]
gi|24986114|gb|AAN69968.1|AE016635_4 flagellar basal-body rod protein FlgC [Pseudomonas putida KT2440]
gi|313497759|gb|ADR59125.1| FlgC [Pseudomonas putida BIRD-1]
Length = 147
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T QN
Sbjct: 1 MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARH-PVFATTF-QNAQA 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
+ + ++ ++E + + N V + E+
Sbjct: 59 GSSQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +L+ +M+ V+
Sbjct: 119 ISASRAFQTNAELMNTAKNMMQKVLT 144
>gi|307293789|ref|ZP_07573633.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
L-1]
gi|306879940|gb|EFN11157.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
L-1]
Length = 136
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANA-STPNYRA---KDISS-FETILNQ-NFLMA 55
P+ F IA + + R + N+ANA + A + I F+++ +
Sbjct: 5 GPMNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTV 64
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ + + H H + V + EL +Y+ N +
Sbjct: 65 KVQNVVTTNAQPTKRHDPNHPLADKNGDVWEA-----AVDSSAELVDMIETARMYQNNVQ 119
Query: 116 LIKKLNSMVMHVVR 129
++ S++M +R
Sbjct: 120 VLNTAKSLMMETIR 133
>gi|312962590|ref|ZP_07777080.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
gi|311283170|gb|EFQ61761.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
Length = 147
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T+
Sbjct: 1 MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARH-PVFATMFQAGQNG 59
Query: 55 ARTHETHLKESDSSGLHWNA-HVIEAPLDQTTGVQVS---GN--------TVGITNELYK 102
++ +E D++G V+E + + + N V + E+
Sbjct: 60 G--SDSLFQEQDAAGKGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMAD 117
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ +M+ V+
Sbjct: 118 MISASRSFQTNAEMMNTAKTMMQKVLT 144
>gi|90579907|ref|ZP_01235715.1| flagellar basal body rod protein [Vibrio angustum S14]
gi|90438792|gb|EAS63975.1| flagellar basal body rod protein [Vibrio angustum S14]
Length = 138
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA++ + Y+A+ + + ++
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYHQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +K S +A + V + E+ Y+ N
Sbjct: 61 SSSVPVQVKGIVESDKPLSAEYNPEHPMANVEGFIYKPNVNVMEEMANMISASRSYQNNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M+M ++
Sbjct: 121 QVADASKQMLMKTLQ 135
>gi|300114801|ref|YP_003761376.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
C-113]
gi|299540738|gb|ADJ29055.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
C-113]
Length = 137
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 9/136 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F IA + + R + N+ANA + + YRA+ F T+L++
Sbjct: 1 MSLFKVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIHQTYRARQ-PVFATLLDELNPA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA-PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
A + SG P+ G N V E+ Y+ N
Sbjct: 60 APAGGVQVLGVVESGAPLQQEYAPDHPMANEAGYIFHPN-VNSIEEMANMISASRSYQNN 118
Query: 114 TKLIKKLNSMVMHVVR 129
++ +++ ++
Sbjct: 119 VEMANTSKQLLLRTLQ 134
>gi|300114797|ref|YP_003761372.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
C-113]
gi|299540734|gb|ADJ29051.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
C-113]
Length = 261
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHLKESD 66
IA + R +S N+AN +T ++ +D + FE +L Q A++ + L S
Sbjct: 7 IAKTGLDAQQTRMATISNNLANVNTTGFK-RDRAVFEDLLYQTVRQPGAQSSQNTLLPSG 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
V L G+ +GN++ + +
Sbjct: 66 LMLGTGVRTVATEKLFTQGGLTQTGNSLDMAIQ 98
>gi|148266225|ref|YP_001232931.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
Rf4]
gi|146399725|gb|ABQ28358.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
Rf4]
Length = 146
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M T I+S R ++S N+ANA++ YR KD SF +
Sbjct: 1 MDFFTSMDISSSALTAERTRMNLISSNLANANSTRTAEGGPYRRKDAVFSARPVAESFSS 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
+ ++ + + + + D V+ V + E+
Sbjct: 61 VFSKTGNRGVPQQVGVVQINEDQNPPRLQYDPTHPDANQQGYVALPNVNVVEEMADMIAA 120
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N + SM M +
Sbjct: 121 TRTYEANVTAAQAAKSMAMKTL 142
>gi|239815253|ref|YP_002944163.1| flagellar basal body protein [Variovorax paradoxus S110]
gi|239801830|gb|ACS18897.1| flagellar basal body protein [Variovorax paradoxus S110]
Length = 127
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 9/119 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ + S RQ+ ++ NIANA+ Y + + SFE L L S
Sbjct: 13 LAMALDAASLRQQAIATNIANANAVGYVPQRV-SFEDQLADARSTLAQSGR-LDAFALSQ 70
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ L VQ + E Y+ K + + +++
Sbjct: 71 VRPRIEPAADDLGVPVQVQ-------LDAEAADMARNAVHYQALVKGLSRHFAILSMAA 122
>gi|212639569|ref|YP_002316089.1| flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
WK1]
gi|212561049|gb|ACJ34104.1| Flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
WK1]
Length = 145
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 19/139 (13%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH---LK 63
F +++ R ++S N+AN T RAK + + ++ + +E+ L
Sbjct: 5 FNVSASALTAQRLRMDVISANMANVDTT--RAKMVDGKWQPYRRKMVVMQPNESFSSFLN 62
Query: 64 ESDSSGLHWNAHVIEAPLDQ--------TTGVQVSGN------TVGITNELYKSGHIKYL 109
++ + V E DQ + N V E+
Sbjct: 63 QAMNERSTGGVKVTEIIEDQTPFKLVYDPSHPDADENGYVQLPNVDPLKEMVDLMSATRS 122
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE N ++ M+M +
Sbjct: 123 YEANVTVLNATKGMLMKAL 141
>gi|294013084|ref|YP_003546544.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
gi|292676414|dbj|BAI97932.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
Length = 138
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANA-STPNYRA---KDISS-FETILNQ-NFLMA 55
P+ F IA + + R + N+ANA + A + I F+++ +
Sbjct: 7 GPMNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTV 66
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
+ + + H H + V + EL +Y+ N +
Sbjct: 67 KVQNVVTTNAQPTKRHDPNHPLADKNGDVWEA-----AVDSSAELVDMIETARMYQNNVQ 121
Query: 116 LIKKLNSMVMHVVR 129
++ S++M +R
Sbjct: 122 VLNTAKSLMMETIR 135
>gi|330445346|ref|ZP_08308998.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489537|dbj|GAA03495.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 138
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA++ + Y+A+ + + ++
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALESASYNR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +K S A + V + E+ Y+ N
Sbjct: 61 EDSVPVQVKGIVESERPLTAEYNPDHPMANAQGFIYKPNVNVMEEMANMISASRSYQNNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M+M ++
Sbjct: 121 QVADASKQMLMKTLQ 135
>gi|225375315|ref|ZP_03752536.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
16841]
gi|225212804|gb|EEG95158.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
16841]
Length = 146
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 20/139 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSFETI 47
M F I++ R ++ENIAN +T + K+++SF
Sbjct: 1 MALFQAFDISASGMTAERFRMDTIAENIANVNTTRTEDGTPYRRKIVTFAEKEVTSFSRY 60
Query: 48 LNQNFLMARTHE---THLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKS 103
+ + +KE + D+ V + NTV E+
Sbjct: 61 YQNARSKFVGNGVKVSSVKEDTETDFIMEYDPSNPDADENGYVSYPNVNTV---TEMTNL 117
Query: 104 GHIKYLYELNTKLIKKLNS 122
YE NT + S
Sbjct: 118 IDASRAYEANTTAFEAAKS 136
>gi|83594157|ref|YP_427909.1| flagellar basal body rod protein FlgC [Rhodospirillum rubrum ATCC
11170]
gi|83577071|gb|ABC23622.1| Flagellar basal-body rod protein FlgC [Rhodospirillum rubrum ATCC
11170]
Length = 137
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYR------AKDISSFETILNQNFLMARTHETHL 62
IA+ +ER + +++N+ANA + R + + +F++++++ +
Sbjct: 10 IATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVGAEMVRTGRV 69
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+E S+ + + + V E+ + YE N +I
Sbjct: 70 REDMSAFTRKYDPSHPGADAEGYVLAPN---VNPMVEMMDMREAQRSYEANLNVITATRE 126
Query: 123 MVMHVV 128
M + +
Sbjct: 127 MTRNTL 132
>gi|257866396|ref|ZP_05646049.1| flagellar hook-basal body complex protein [Enterococcus
casseliflavus EC30]
gi|257873088|ref|ZP_05652741.1| flagellar hook-basal body complex protein [Enterococcus
casseliflavus EC10]
gi|257800354|gb|EEV29382.1| flagellar hook-basal body complex protein [Enterococcus
casseliflavus EC30]
gi|257807252|gb|EEV36074.1| flagellar hook-basal body complex protein [Enterococcus
casseliflavus EC10]
Length = 233
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
+ S++ + L +RQ+ S NIAN +T Y+AK + F++ L++ L
Sbjct: 5 LDVLSRNISLLQKRQETTSGNIANVNTTGYQAKTL--FQSALDEVAL 49
>gi|304316910|ref|YP_003852055.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778412|gb|ADL68971.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 149
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 16/144 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M + I++ R ++S+NIAN T YR K + +SF
Sbjct: 1 MGFLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNGGPYRRKLVVLKEIDNQNSFSD 60
Query: 47 ILN--QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
+LN + + D + N D V+ V I +E+
Sbjct: 61 MLNTAKGIQAVGNGVEVVSIVDDNKTPLNRVYDPGNPDADNTGYVNYPNVNIVSEMVDMI 120
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM+ +
Sbjct: 121 SATRAYEANVTAVNSAKSMIEKAL 144
>gi|259908814|ref|YP_002649170.1| flagellar basal body rod protein FlgC [Erwinia pyrifoliae Ep1/96]
gi|224964436|emb|CAX55945.1| Cell-proximal portion of basal-body rod [Erwinia pyrifoliae Ep1/96]
gi|283478796|emb|CAY74712.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
12163]
gi|310767288|gb|ADP12238.1| flagellar basal body rod protein FlgC [Erwinia sp. Ejp617]
Length = 134
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M F IA S+R + + N+ANA + P+ Y AK + F+T
Sbjct: 1 MALTRIFDIAGSAMAAQSQRLNVSASNLANADSVTGPDGQPYVAKQVV-FQTNAAPGSPT 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + + V + E + Y+ N
Sbjct: 60 GGVRVAEVINDPTPAKLVYEPGNPMADARGYIKMPN---VDVVAETVNTLSASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ + M+M +
Sbjct: 117 EVLNTVKQMMMKTLT 131
>gi|219684534|ref|ZP_03539477.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
gi|219685765|ref|ZP_03540576.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
gi|219671896|gb|EED28950.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
gi|219672704|gb|EED29732.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
Length = 152
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + +AS R ++S NIAN ST P+ YR + I F ++ +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRII-FAPRVSNPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQVSGN-------------TVGITNEL 100
+L G + ++PL + V + E+
Sbjct: 60 GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|77165840|ref|YP_344365.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
19707]
gi|254433209|ref|ZP_05046717.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
gi|76884154|gb|ABA58835.1| Flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
19707]
gi|207089542|gb|EDZ66813.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
Length = 137
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 9/136 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQ-NFL 53
M F IA + + R + N+ANA + + YRA+ F T+L++ N
Sbjct: 1 MSLFKVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIDQTYRARQ-PVFATLLDKFNPE 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
L +S + + P+ G N V E+ YE N
Sbjct: 60 APAGGVQVLGVVESGAPLQQEYAPDHPMANEAGYIFHPN-VNSIEEMANMISASRNYENN 118
Query: 114 TKLIKKLNSMVMHVVR 129
++ +++ ++
Sbjct: 119 VEMANTSKQLLLRTLQ 134
>gi|317129211|ref|YP_004095493.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
DSM 2522]
gi|315474159|gb|ADU30762.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
DSM 2522]
Length = 148
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET----HLKESDSSGLHWNAH 75
R +VS N+ANA T RA+ + + ++ + + HL ++
Sbjct: 20 RMDVVSSNMANADTT--RARLVDGEWQPYRRKMVVLEQNGSGFSSHLDKAMGKTHGNGVK 77
Query: 76 VIEAPLDQT------TGVQVSGN--------TVGITNELYKSGHIKYLYELNTKLIKKLN 121
V E D+T N V E+ YE N +
Sbjct: 78 VREIVEDETPFRLVFQPDHPDANEDGYVELPNVDPLKEMIDLMSATRSYEANVTTLDAHK 137
Query: 122 SMVMHVV 128
+M++ +
Sbjct: 138 NMLLKAL 144
>gi|323178496|gb|EFZ64074.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
Length = 130
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 14/128 (10%)
Query: 14 ANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ R V+ N+ANA+ P Y+A+ F + + + +A TH + +
Sbjct: 1 MTAQTLRLNTVASNLANANAPASSEAQAYKARS-PVFAAVYHHSL-LAGTHRHAIDGASV 58
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ N V + ++ +E N ++ +
Sbjct: 59 QVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDVLNNVK 118
Query: 122 SMVMHVVR 129
SM +++
Sbjct: 119 SMQQSLLK 126
>gi|83747656|ref|ZP_00944692.1| FlgC [Ralstonia solanacearum UW551]
gi|300696911|ref|YP_003747572.1| FlgC: flagellar basal-body rod protein [Ralstonia solanacearum
CFBP2957]
gi|83725708|gb|EAP72850.1| FlgC [Ralstonia solanacearum UW551]
gi|299073635|emb|CBJ53155.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
CFBP2957]
Length = 135
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLM 54
M +A S+R +V+ N+ANA YRAK + +
Sbjct: 1 MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYAT 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ++++ + + + V + +E+ Y+ N
Sbjct: 61 GVSVDGVVEDTVTPMKRMHQPGNPLADADGYVTMPN---VDVVDEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
++ +M +
Sbjct: 118 EVANTTKTMAAKALT 132
>gi|33596138|ref|NP_883781.1| flagellar basal body rod protein FlgC [Bordetella parapertussis
12822]
gi|33601539|ref|NP_889099.1| flagellar basal body rod protein FlgC [Bordetella bronchiseptica
RB50]
gi|33573141|emb|CAE36788.1| flagellar basal-body rod protein FlgC [Bordetella parapertussis]
gi|33575975|emb|CAE33054.1| flagellar basal-body rod protein FlgC [Bordetella bronchiseptica
RB50]
Length = 139
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 51/140 (36%), Gaps = 16/140 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F+IA + S+R + + N+ANA + P+ YRA+ + + N
Sbjct: 1 MSLLSIFEIAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQV-----VFQVNPPP 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT-----NELYKSGHIKYL 109
+ + +G+ + + D + + V + E
Sbjct: 56 GQAFGQEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRS 115
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N +++ +++ +
Sbjct: 116 YQANVEVLNTAKQLMLKTLT 135
>gi|89075493|ref|ZP_01161904.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
SKA34]
gi|89048765|gb|EAR54336.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
SKA34]
Length = 138
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA++ + Y+A+ + + ++
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYHQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +K S +A + V + E+ Y+ N
Sbjct: 61 SSSVPVQVKGIIESDKPLSAEYNPEHPMANAEGFIYKPNVNVMEEMANMISASRSYQNNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M+M ++
Sbjct: 121 QVADASKQMLMKTLQ 135
>gi|1448943|gb|AAB04619.1| flagellar basal body distal rod protein [Borrelia burgdorferi]
Length = 152
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 19/147 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS-----FETILNQNFLMA 55
M + +AS R ++S NIAN ST D+ F +N +
Sbjct: 1 MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGDLIEGQRIIFAPRVNNPYWKG 60
Query: 56 RTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNELY 101
+L G + ++PL SG+ V + E+
Sbjct: 61 PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMV 120
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSAL 147
>gi|237653585|ref|YP_002889899.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
gi|237624832|gb|ACR01522.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
Length = 134
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + FQIA N S R + N+ANA + YRAK + + +
Sbjct: 1 MSMLNVFQIAGSALNAQSLRLNATASNLANADSVISEDGQPYRAKQVVFAARPVAGPAAV 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ + L + + A D + V + E+ Y+ N
Sbjct: 61 GVQVTQVVESAAPLRLVFEPNNPAANPDGYVEMP----NVNVVEEMVNMISASRSYQNNA 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ ++
Sbjct: 117 EVMSTARTLLQRTLQ 131
>gi|85712252|ref|ZP_01043303.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
gi|85693879|gb|EAQ31826.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
Length = 150
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 17/146 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F I+ + S R + N+ANA++ + YRA+ + + +
Sbjct: 1 MSLFNIFNISGSAMSAQSVRLNTTASNLANANSVSSSIDETYRARSPIFAAALSDASGKY 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS-----------GNTVGITNELYKS 103
T T+ ++ S V+E+ + + V E+
Sbjct: 61 HGTELTNQTQAGQSAGVKVLGVVESDKPLQIEYAPNHPMADKNGYIYRSNVNTMEEMANM 120
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
Y+ N ++ +M ++R
Sbjct: 121 ISASRSYQTNVQVADTAKTMTQRLLR 146
>gi|323705448|ref|ZP_08117023.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535350|gb|EGB25126.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 149
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 48/145 (33%), Gaps = 18/145 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M + I++ R ++S+NIAN T YR K + SSF
Sbjct: 1 MGFLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNGGPYRRKLVVLKEIDNQSSFSD 60
Query: 47 ILNQN-FLMARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKS 103
+LN + + + V + P +TG N V I +E+
Sbjct: 61 MLNAAKGSSTVGNGVEVVSIEEDNKTPFNRVYDPGNPDADSTGYVNYPN-VNIVSEMVDM 119
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM+ +
Sbjct: 120 ISATRAYEANVTAVNSTKSMIEKAL 144
>gi|291334310|gb|ADD93971.1| predicted flagellar proximal rod protein [uncultured marine
bacterium MedDCM-OCT-S09-C247]
Length = 138
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 7/130 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLMARTH 58
F +A++ + R V+ N+ANA YRA F T+ + +
Sbjct: 6 NIFDVAARGMSAQMVRLNTVASNLANARSVASSEAEAYRAIK-PVFSTLYADDLERSGVS 64
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ + + + V EL + YE N +++
Sbjct: 65 SVDVVDIVAVDREPEKVYQPGHPKADEDGYIYMAAVNTEEELVEMLEASRQYENNVEVVS 124
Query: 119 KLNSMVMHVV 128
L ++M +
Sbjct: 125 TLRGLMMRTI 134
>gi|260772272|ref|ZP_05881188.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
69.14]
gi|260611411|gb|EEX36614.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
69.14]
Length = 138
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 6/135 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F + + S R S N+ANA + + Y+A+ + +
Sbjct: 1 MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARHAVFGAELNKARYHR 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ S NA + V + E+ Y+ N
Sbjct: 61 DPNVPVKVLGIVESNKPLNAEYNPDHPLANDEGFIYKPNVNVMEEMANMISASRSYQTNV 120
Query: 115 KLIKKLNSMVMHVVR 129
++ M++ ++
Sbjct: 121 QVADASKQMLLRTLQ 135
>gi|78224306|ref|YP_386053.1| flagellar basal-body rod protein FlgC [Geobacter metallireducens
GS-15]
gi|78195561|gb|ABB33328.1| Flagellar basal-body rod protein FlgC [Geobacter metallireducens
GS-15]
Length = 147
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 42/142 (29%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + QI+S + R ++S NIANA++ Y+ KD T + F
Sbjct: 1 MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQA 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TVGITNELYKSGHI 106
A + P Q N V + E+
Sbjct: 61 AMERMRRGTSPAGVQVTQVIEDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAA 120
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M + +
Sbjct: 121 TRAYEANVTAVQAAKGMALKTL 142
>gi|33592477|ref|NP_880121.1| flagellar basal body rod protein FlgC [Bordetella pertussis Tohama
I]
gi|33572123|emb|CAE41665.1| flagellar basal-body rod protein FlgC [Bordetella pertussis Tohama
I]
gi|332381894|gb|AEE66741.1| flagellar basal body rod protein FlgC [Bordetella pertussis CS]
Length = 139
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 51/140 (36%), Gaps = 16/140 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F+IA + S+R + + N+ANA + P+ YRA+ + + N
Sbjct: 1 MSLLSIFEIAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQV-----VFQVNPPA 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT-----NELYKSGHIKYL 109
+ + +G+ + + D + + V + E
Sbjct: 56 GQAFGQEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRS 115
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N +++ +++ +
Sbjct: 116 YQANVEVLNTAKQLMLKTLT 135
>gi|296447440|ref|ZP_06889365.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
OB3b]
gi|296255060|gb|EFH02162.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
OB3b]
Length = 139
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 9/138 (6%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
M P+ +IA + S R ++V+EN+ANA + A ++ + R
Sbjct: 1 MDPLQASMKIAGSGLSAQSARLRVVAENMANAQSVAKTAGGAPYSRKTISFQSEVDRASG 60
Query: 60 THLKESDSSGLHWNAHVIE----APLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
L + G+ +E P T G N V + E+ YE N +
Sbjct: 61 ASLVQVGPIGVDRAPFRVEHDPGNPAADTDGYVKYPN-VNLMTEVADMREANRSYEANVQ 119
Query: 116 LIKK---LNSMVMHVVRG 130
++K+ L SM + +++G
Sbjct: 120 VMKQTRELFSMTIDLLKG 137
>gi|23016627|ref|ZP_00056381.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
magnetotacticum MS-1]
Length = 136
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 11/127 (8%)
Query: 9 IASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHETH 61
IA S+R +++SEN+AN+ TP YR + + +F+ L++ +
Sbjct: 10 IAISGMKVQSQRLRLISENLANSDSLAQTPEGLPYR-RKVMTFKNELDRATGTSLVKVDK 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ S A + + V E+ + YE N +I
Sbjct: 69 VRADSSEFQRRYDPKHPAADRDGYVLAPN---VNPLIEMMDMREAQRSYEANMNVINASR 125
Query: 122 SMVMHVV 128
S++ +
Sbjct: 126 SLLSRTI 132
>gi|257876009|ref|ZP_05655662.1| flagellar hook-basal body complex protein [Enterococcus
casseliflavus EC20]
gi|257810175|gb|EEV38995.1| flagellar hook-basal body complex protein [Enterococcus
casseliflavus EC20]
Length = 233
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
+ S++ + L +RQ+ S NIAN +T Y+AK + F++ L++ L
Sbjct: 5 LDVLSRNISLLQKRQETTSGNIANVNTTGYQAKTL--FQSALDEVAL 49
>gi|313895889|ref|ZP_07829443.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|312975314|gb|EFR40775.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
str. F0430]
Length = 274
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R ++ NIAN +T ++A ++ FE +L+Q A T + ++ + V
Sbjct: 15 HQTRMDVIGNNIANVNTTGFKAGRVT-FEDMLSQTLSGAAAPGTTIGGTNPKQIGLGVSV 73
>gi|90021857|ref|YP_527684.1| flagellar basal body rod protein FlgC [Saccharophagus degradans
2-40]
gi|89951457|gb|ABD81472.1| flagellar basal-body rod protein FlgC [Saccharophagus degradans
2-40]
Length = 144
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD--ISSFETILNQNF 52
M F A N S R + NIANA T + YR + ++ + Q
Sbjct: 1 MSLSGIFDTAGSGMNAQSVRLNTTASNIANAETASSSADTVYRGRHPVFATVQAGYMQGQ 60
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEA-----PLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ A E + + +A + P G N V I E+
Sbjct: 61 VGALDDEQEMGVQVMGIVESDAPLQRRYEPGHPQADEEGYVHYPN-VNIVEEMANMISAS 119
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+++N +++ MV V++
Sbjct: 120 RSFQMNVEVMNSAKQMVQRVLQ 141
>gi|15644117|ref|NP_229166.1| flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
gi|281412855|ref|YP_003346934.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
RKU-10]
gi|4981925|gb|AAD36435.1|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
gi|281373958|gb|ADA67520.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
RKU-10]
Length = 140
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I++ + R +IVS NIANA T YR + + F L +
Sbjct: 2 MSEFEIMNISATGMSAQRLRVEIVSTNIANAETTRTETGEPYR-RKVPVFAEYLRRTPNG 60
Query: 55 ARTHETHLK---ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
E D S D+ V++ V I E+ + + Y+
Sbjct: 61 KIESAGVKVVKIEEDPSPFRLVYDPTHPDADENGYVRMP--NVNIVREMVDLINAQRAYD 118
Query: 112 LNTKLIKKLNSMVMHVVR 129
N +MV ++
Sbjct: 119 ANVAAFNVTKAMVNSALQ 136
>gi|295399807|ref|ZP_06809788.1| flagellar basal-body rod protein FlgC [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111681|ref|YP_003989997.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
gi|294978210|gb|EFG53807.1| flagellar basal-body rod protein FlgC [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216782|gb|ADP75386.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
Length = 150
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 42/148 (28%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + R +VS N+AN T RA+ ++ + ++ +
Sbjct: 1 MSMFQNLDITASALTAQRLRMDVVSSNMANVDTT--RARFVNGQWEPYRRKLVVMEPRQE 58
Query: 61 HLKESDSSGLHWNAHV---------IEAP-----LDQTTGVQVSGN------TVGITNEL 100
+ ++ V +E P + + N V E+
Sbjct: 59 GFSTYLQAAMNSRDSVGGGVRVTKIVEDPAPFKLVYDPSHPDADRNGYVRLPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 119 VDLMSATRSYEANVTVFNATKGMLMKAL 146
>gi|299066532|emb|CBJ37722.1| putative flagellar basal-body rod protein flgB [Ralstonia
solanacearum CMR15]
Length = 128
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ + S RQ+ ++ NIAN+ T Y ++ F+ + + + L
Sbjct: 12 MMGLALDAASLRQQAIAANIANSETAGYVPVGVT-FDAQMAEMQRLLDGGSGQLDAGVLE 70
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ + + + E+ Y+ K + K +++ V
Sbjct: 71 AMQPRLQPVTDMAGVPAKIM-------LDVEVANLAQNAVQYQALVKGLSKHYAILSSAV 123
>gi|150021011|ref|YP_001306365.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
BI429]
gi|149793532|gb|ABR30980.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
BI429]
Length = 137
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 11/137 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M IA+ + R +++ N+AN+ T YR + + F+ +L
Sbjct: 1 MNEFNIMTIAATGMSAQRLRIDVITNNLANSETTRTEKGEPYR-RKVPVFQELLRNVRGR 59
Query: 55 ARTHETHLKES--DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+KE D S D+ V++ V + E+ + + YE
Sbjct: 60 LENGGVVVKEIYEDQSPFRVVYDPTHPDADENGYVKLP--NVNVVREMVDMINAQRAYEA 117
Query: 113 NTKLIKKLNSMVMHVVR 129
N +M+ ++
Sbjct: 118 NVTAFNTTKAMINSALQ 134
>gi|197103407|ref|YP_002128785.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
zucineum HLK1]
gi|196480683|gb|ACG80210.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
zucineum HLK1]
Length = 141
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 20/132 (15%)
Query: 9 IASQHANWLSERQKIVSENIAN----ASTPN---YRAKDISSFETIL----NQNFLMART 57
IA+ R +I++ENIAN A+TP YR + + F + + + + RT
Sbjct: 14 IAAMALRAQQARMRIIAENIANSQTTAATPGGDPYR-RQMPIFAPLKLEDGSVSVQLVRT 72
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
D + D + V +S V E + YE N +I
Sbjct: 73 EP------DPTAFKKEYSPGHPAADPSGYVTLS--NVETLVESLDFKAAQRAYEANLNVI 124
Query: 118 KKLNSMVMHVVR 129
++M +R
Sbjct: 125 DTSHAMEQSTMR 136
>gi|297569162|ref|YP_003690506.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
AHT2]
gi|296925077|gb|ADH85887.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
AHT2]
Length = 144
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 12/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +T +I+ R + S N+ANA+T YRAK + L+++F
Sbjct: 1 MDILTAMKISGSALKAERSRLNVASMNLANANTTRTMEGGPYRAKSVVFEAKPLDRDFGA 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A + N V + ++ + +
Sbjct: 61 ALQGAASRLRKVEVVEVVEDQAPFREVYDPAHPDADENGIVRYPNVNVAEQMVDMMNARR 120
Query: 109 LYELNTKLIKKLNSM 123
YE N ++ + M
Sbjct: 121 SYEANVAALEAVKEM 135
>gi|17548564|ref|NP_521904.1| flagellar basal-body rod protein FlgC [Ralstonia solanacearum
GMI1000]
gi|300693335|ref|YP_003749308.1| flagellar basal-body rod protein flgc (proximal rod protein)
[Ralstonia solanacearum PSI07]
gi|17430812|emb|CAD17494.1| probable flagellar basal-body rod protein flgc [Ralstonia
solanacearum GMI1000]
gi|299075372|emb|CBJ34667.1| Flagellar basal-body rod protein flgC (proximal rod protein)
[Ralstonia solanacearum PSI07]
Length = 135
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLM 54
M +A S+R +V+ N+ANA YRAK + +
Sbjct: 1 MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQETDGYAT 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ++++ + + + V + +E+ Y+ N
Sbjct: 61 GVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPN---VDVVDEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
++ +M +
Sbjct: 118 EVANTTKTMAAKALT 132
>gi|332162903|ref|YP_004299480.1| flagellar basal-body rod protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604250|emb|CBY25748.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325667133|gb|ADZ43777.1| Flagellar basal-body rod protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863353|emb|CBX73476.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
W22703]
Length = 141
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M ++++ + R ++ N+ANA +P Y+A+ F + +
Sbjct: 1 MSFNNIYRVSGSAMTAQTIRLNAIASNLANAESPAASAATVYKARS-PVFSAVYS---PR 56
Query: 55 ARTHETHLKES-------DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ T+ + + +G + PL G V + +E+
Sbjct: 57 SATNPGGVNGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFYP-AVNVVSEMADMMSAS 115
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM V+R
Sbjct: 116 RSFETNVEVLNSVKSMQQSVLR 137
>gi|205375363|ref|ZP_03228153.1| flagellar hook-basal body complex protein [Bacillus coahuilensis
m4-4]
Length = 279
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKD-------ISSFETILNQNFLMARTH 58
+A+ L + ++S N+AN T Y+A++ + F+ N + R
Sbjct: 4 IMNVATNTMAQLQQHLDVISHNVANVDTNGYKAQNARFSEMLVQQFDNQKNPANEIGRLT 63
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
L+ +G+ Q+TG +
Sbjct: 64 PNGLRLGVGAGIGQIQMNTSQGALQSTGRSLD 95
>gi|304407726|ref|ZP_07389377.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
YK9]
gi|304343209|gb|EFM09052.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
YK9]
Length = 270
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--HETHLKESDS 67
A N L ++ I+++NIAN +T Y+ KD +SFE +L + +
Sbjct: 8 AMVSMNGLQQKLDILADNIANLNTVGYKRKD-ASFEDLLTNAKQQPSAFKEPGRMSPMNY 66
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ P +Q +GNT+ I E ++
Sbjct: 67 TQGWGVRLATIEPDLSQGPLQQTGNTLDIAIEGNALYEVR 106
>gi|27904802|ref|NP_777928.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|46395818|sp|Q89AH9|FLGC_BUCBP RecName: Full=Flagellar basal-body rod protein flgC
gi|27904200|gb|AAO27033.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 136
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 14/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS---------FETILNQN 51
M F I+ S++ + ++N+AN+ + Y+ + F+ I N
Sbjct: 1 MSLFNIFNISGSALETQSKKMDVHAKNLANSDSYIYKNGTLYPYVARIPMLQFDPISENN 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ H D+S L + D +VS V I +E + Y+
Sbjct: 61 VGGVK---MHTVAGDTSSLKSIYNPNSPIADSNGYSKVS--NVDIMSETINAITASKNYQ 115
Query: 112 LNTKLIKKLNSMVMHVVR 129
N +++ +M+M +
Sbjct: 116 TNLEILNTTKNMIMKTLT 133
>gi|238782790|ref|ZP_04626819.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
43970]
gi|238716213|gb|EEQ08196.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
43970]
Length = 121
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 18 SERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
S+R + + N+ANA + P+ YRA+ + F+ + + + ES
Sbjct: 5 SKRLNVSASNMANADSAVGPDGQPYRARQVV-FQVNSAPGQEIGGVRVSDVMESSDPDRM 63
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
D+ + N V E+ + Y+ N +++ SM++ +
Sbjct: 64 VYEPGNPLADDKGYVRMPNVNVVS---EMVNTISASRSYQANVEVLNTAKSMMLKTLT 118
>gi|77460471|ref|YP_349978.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
Pf0-1]
gi|77384474|gb|ABA75987.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
Pf0-1]
Length = 147
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ + Q
Sbjct: 1 MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRAR--HPVFATMFQGGQS 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG-----------NTVGITNELYKS 103
++ + + V+E + + + V + E+
Sbjct: 59 GGSNSLFQNQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ +M+ V+
Sbjct: 119 ISASRSFQTNAEMMNTAKTMMQKVLT 144
>gi|147678402|ref|YP_001212617.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
gi|146274499|dbj|BAF60248.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
Length = 264
Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETIL 48
A+ + L R + VS N+ANASTP Y+ +DI+ SF +L
Sbjct: 8 AAAGMDVLQARVESVSNNLANASTPGYKREDITIRSFPEML 48
>gi|327398582|ref|YP_004339451.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
gi|327181211|gb|AEA33392.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
Length = 103
Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 25/109 (22%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
RQ I + N+AN +T NY+ ++ + +E+ G+ V +A
Sbjct: 16 RQDITANNVANINTKNYKQVNVIN-------------------QEAKGGGVEAKTTVSKA 56
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
++ +GN V + +++ + + N +I+ N M+ ++
Sbjct: 57 APNR------NGNNVSLADQMVNQISNQDQNKANVNVIRAQNEMIGSLI 99
>gi|196249721|ref|ZP_03148417.1| protein of unknown function DUF1078 domain protein [Geobacillus
sp. G11MC16]
gi|196210597|gb|EDY05360.1| protein of unknown function DUF1078 domain protein [Geobacillus
sp. G11MC16]
Length = 273
Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETHL 62
A+ N L +R +S NIAN++T ++ ++ +SF +L Q R +
Sbjct: 7 TAANTMNALQQRLDTLSHNIANSNTTGFKRRE-ASFAELLTQQVDHLPDDEAPRQTPAGM 65
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + +GL V TG +
Sbjct: 66 RYGNGAGLASTMLVTAQGPLTETGRALD 93
>gi|222100200|ref|YP_002534768.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
4359]
gi|221572590|gb|ACM23402.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
4359]
Length = 139
Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 14/139 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I++ + R +IVS NIANA T YR + + F L +
Sbjct: 1 MSEFDIMNISATGMSAQRLRVEIVSTNIANAETTRTEMGEPYR-RKVPVFAEYLRRAKD- 58
Query: 55 ARTHETHLK----ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
R +K D S D+ V++ V I E+ + + Y
Sbjct: 59 GRIESAGVKVVKIVEDPSPFRLVYDPTHPDADENGYVRMP--NVNIVREMVDLINAQRAY 116
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+ N +MV ++
Sbjct: 117 DANVAAFNVTKNMVNSALQ 135
>gi|291278935|ref|YP_003495770.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
SSM1]
gi|290753637|dbj|BAI80014.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
SSM1]
Length = 134
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 11/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +IAS + R ++S N+ANA+T Y+ +++ F TIL+
Sbjct: 1 MSYFDILKIASTGLSAQRIRINVISSNLANANTTRTEDGTPYQKREVI-FRTILDGELRG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
E +++ L + +A + + E+ YE N
Sbjct: 60 GVRVEKVVRDEKPPILKYEPGHPDANEEGYVAYP----NINPIEEMVNMLEASRSYEANV 115
Query: 115 KLIKKLNSMVMHVV 128
++ + + +
Sbjct: 116 TVLNTAKQLALKAL 129
>gi|227356000|ref|ZP_03840392.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
gi|227163988|gb|EEI48890.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
Length = 251
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 15/120 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A E Q +V+ N+ANASTP ++A+ + + + T T +S+
Sbjct: 7 TAMGGARHSMENQAVVANNLANASTPGFKAQ-----LSAMRAVPINGETLPTRTLTVEST 61
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGN---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ V +S N V + Y N + + + M+M
Sbjct: 62 PGSDQRQGTMNYTGRPMDVALSDNGYLAVQLE-------DGTQAYTRNGNIERNADGMLM 114
>gi|103488385|ref|YP_617946.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
RB2256]
gi|98978462|gb|ABF54613.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
RB2256]
Length = 267
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 9/130 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST-PNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F I+ + + R + N+ANA T A S + + +
Sbjct: 139 SVFDISGRAMSAQLVRLNTTASNLANAGTVAGSEAGAFRSLKPVFRTVMDDHGRATVQID 198
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIKK 119
+ +S + + + GN V EL + Y+ N ++++
Sbjct: 199 QITTSKMAPSKRHDPSNPLAD----ADGNVWEAAVDSAAELVEMVETARQYQNNVQVLET 254
Query: 120 LNSMVMHVVR 129
++ +R
Sbjct: 255 AKGLINETLR 264
>gi|138894738|ref|YP_001125191.1| flagellar basal body rod protein FlgC [Geobacillus
thermodenitrificans NG80-2]
gi|196247641|ref|ZP_03146343.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
gi|134266251|gb|ABO66446.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
NG80-2]
gi|196212425|gb|EDY07182.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
Length = 150
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 40/148 (27%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI------SSF 44
M I++ R ++S NIAN T YR K + F
Sbjct: 1 MSMFQSLNISASALTAQRLRMDVISSNIANVDTTRARLVNGEWEPYRRKVVVVEPRGEQF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNEL 100
+ L + ++ + ++ P G G V E+
Sbjct: 61 SSYLQAALGRTDAVGSGVRVREIVDDPAPFKLLYDPDHPDAG--DDGYVRLPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 119 VDLIGATRSYEANVTALNASKGMLMKAL 146
>gi|326791545|ref|YP_004309366.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
5427]
gi|326542309|gb|ADZ84168.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
5427]
Length = 145
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 46/144 (31%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M IA+ R I+S+N+AN +T Y+ K + +SF +
Sbjct: 1 MGFFDSMDIAASGLTAQRLRLDIISQNMANVNTTRTAEGGPYKRKTVIFEQMQNENSFSS 60
Query: 47 ILNQNFLMA--RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
ILN+ + E +S G Q + NTV E+
Sbjct: 61 ILNKKKQSGVNGVRVARIVEDESQGALVYNPTHPDANAQGYVEMPNVNTVD---EMVNMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM +
Sbjct: 118 SASRSYEANVTSFNTMKSMFAKAL 141
>gi|294084416|ref|YP_003551174.1| flagellar basal-body rod protein FlgG [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663989|gb|ADE39090.1| flagellar basal-body rod protein FlgG [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 262
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETHLKES 65
+A N R ++++ N+AN +T ++ +D ++FET+L ++ + +T L +
Sbjct: 8 VAKTGLNAQQTRMQVIANNLANVNTTGFK-RDRANFETLLYQVRRSAGEETSADTDLTSA 66
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ G + + Q + +Q N++ + E
Sbjct: 67 FAVGTGARIVNTQKMMSQGSMIQTD-NSLDLAIE 99
>gi|218886418|ref|YP_002435739.1| hypothetical protein DvMF_1322 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757372|gb|ACL08271.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 136
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE---T 60
I F + + + N+AN +T +RA D+ +Q+ +
Sbjct: 2 IDGFGTPLSALDAFGTSMAVTANNVANMNTDEFRASDVRLQTGPASQDGQDGQERGVQVA 61
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GNTVGITNELYKSGHIKYLYELNTKLI 117
+++S + G D + V+ S G+ + NE+ + +E N ++
Sbjct: 62 EIRQSTTEGPLRMDLRRVVHADGSVTVETSAIEGSNTDVANEMVSMLTDQRAFEANAAVV 121
Query: 118 KKLNSM 123
+ + M
Sbjct: 122 RARDEM 127
>gi|254496888|ref|ZP_05109736.1| flagellar basal body rod protein FlgF [Legionella drancourtii
LLAP12]
gi|254353907|gb|EET12594.1| flagellar basal body rod protein FlgF [Legionella drancourtii
LLAP12]
Length = 247
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M PI + AN+ RQ+I++ N+ANA+TP +R D+ +T+ Q + +
Sbjct: 1 MDPILYNAAGGGRANF--SRQEIIANNLANAATPGFRT-DLYQAQTMYAQAAGSNSSGNS 57
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ ++ +S +I + + +G
Sbjct: 58 FVVQNTNSFDLSGGDLITTGRNLDIAINGNG 88
>gi|152997584|ref|YP_001342419.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
gi|150838508|gb|ABR72484.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
Length = 151
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F I+ + + R ++ N+AN + YRA+ F ++N +
Sbjct: 3 MSLSNIFTISGSAMSAQTIRLNTIASNMANVDSAASSADQTYRARK-PVFSQMMNDSMRE 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIE--APLDQTTGVQV-----SGN----TVGITNELYKS 103
+ + ++ + ++E APL G V E+
Sbjct: 62 YGWNNANKDDTGAGVGVKVDGIVESDAPLQPRYEPDHPMANEDGYVFYPNVNPMEEMADM 121
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ SM+ ++
Sbjct: 122 MSASRSFQTNVEIMNSAKSMMQKMLT 147
>gi|330811237|ref|YP_004355699.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379345|gb|AEA70695.1| Putative flagellar basal-body rod protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 147
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA T + YRA+ F T+
Sbjct: 1 MSIASVFNIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARH-PVFATMFQGGQSG 59
Query: 55 ARTHETHLKESDSSGLHWNA-HVIEAPLDQTTGVQVSG-----------NTVGITNELYK 102
++ +E D++G V+E + + + V + E+
Sbjct: 60 G--SDSLFQEQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMAD 117
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ +M+ V+
Sbjct: 118 MISASRSFQTNAEMMNTAKTMMQKVLT 144
>gi|257871307|ref|ZP_05650960.1| flagellar hook-basal body complex protein [Enterococcus
gallinarum EG2]
gi|257805471|gb|EEV34293.1| flagellar hook-basal body complex protein [Enterococcus
gallinarum EG2]
Length = 233
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
+ S++ + L +RQ+ S NIAN +T Y+AK + F++ L++ L
Sbjct: 5 LDVLSRNISLLQKRQETTSGNIANVNTTGYQAKAL--FQSALDEVAL 49
>gi|163794152|ref|ZP_02188125.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
gi|159180766|gb|EDP65285.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
Length = 261
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IAS +++S NIAN +T Y+ + + F+ +L Q+ T+ +
Sbjct: 1 MQSLNIASTGMAAQQFNVEVISNNIANMNTTGYKRQR-AEFQDLLYQDLRRVGTNSSDAG 59
Query: 64 ESDSSGLHWNAHVIEAPL 81
SG+ V A
Sbjct: 60 TIVPSGIQIGVGVKTAAT 77
>gi|187926956|ref|YP_001893301.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
gi|241665285|ref|YP_002983644.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
gi|187728710|gb|ACD29874.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
gi|240867312|gb|ACS64972.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
Length = 135
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 9/135 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M +A S+R +V+ N+ANA + PN YRAK + + ++
Sbjct: 1 MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPNGTAYRAKQVVFTPVQESDDYAT 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ++++ + + + V + +E+ Y+ N
Sbjct: 61 GVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPN---VDVVDEMVNMISASRSYQANV 117
Query: 115 KLIKKLNSMVMHVVR 129
++ +M +
Sbjct: 118 EVANTTKTMAAKALT 132
>gi|148270547|ref|YP_001245007.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
gi|170289253|ref|YP_001739491.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
gi|147736091|gb|ABQ47431.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
gi|170176756|gb|ACB09808.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
Length = 140
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I++ + R +IVS NIANA T YR + + F L +
Sbjct: 2 MSEFEIMNISATGMSAQRLRVEIVSTNIANAETTRTETGEPYR-RKVPVFAEYLRRTPNG 60
Query: 55 ARTHETHLK---ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
E D S D+ V++ V I E+ + + Y+
Sbjct: 61 KIESAGVKVVKIEEDPSPFRLVYDPAHPDADENGYVRMP--NVNIVREMVDLINAQRAYD 118
Query: 112 LNTKLIKKLNSMVMHVVR 129
N +MV ++
Sbjct: 119 ANVAAFNVTKAMVNSALQ 136
>gi|308273186|emb|CBX29789.1| Flagellar basal-body rod protein flgC [uncultured Desulfobacterium
sp.]
Length = 140
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 18/141 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAK-------DISSFETI 47
M + +I+S +R I++EN++N T YR K I SF+ +
Sbjct: 1 MNFMESLKISSSGLYAQRKRMDIIAENLSNIETTRTEKGGPYRRKMIAIGSEPIDSFDEV 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
L+ R ES ++ +H D +S V + E+ +
Sbjct: 61 LDSQLEGVRVDAIVEDESPFRIVYNPSH-----PDADKDGCLSKPNVDLAVEMANMLMAR 115
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
+ N IK MV+ +
Sbjct: 116 NAFSANLSAIKSTRQMVLKAL 136
>gi|331006032|ref|ZP_08329374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
IMCC1989]
gi|330420161|gb|EGG94485.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
IMCC1989]
Length = 140
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 10/138 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD--ISSFETILNQNF 52
M + F IA N S R + N+ANA YR + +S + L+ +
Sbjct: 1 MSLDSVFSIAGSGMNAQSLRLNTTASNLANADAAASSIDETYRGRHPVFASLKDTLSMDS 60
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEA-PLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ + S PL G N V + E+ ++
Sbjct: 61 NGNASVGVGVLGIVESDAPLQPRYEPGHPLSNEEGYVFYPN-VNVVEEMTNMISASRSFQ 119
Query: 112 LNTKLIKKLNSMVMHVVR 129
+N +++ M+ +
Sbjct: 120 INVEVMNSAKQMMQRALT 137
>gi|315498435|ref|YP_004087239.1| flagellar basal-body rod protein flgc [Asticcacaulis excentricus CB
48]
gi|315416447|gb|ADU13088.1| flagellar basal-body rod protein FlgC [Asticcacaulis excentricus CB
48]
Length = 140
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 13/126 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMART 57
+A+ R +I++ENIANA TP YR + I FE + +
Sbjct: 11 PTLSVAASALRAQQARMRIIAENIANADSTGQTPGADPYRGQ-IPVFEAAKIDGAMGVKL 69
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
E+ + D V+ S V + + YE N +I
Sbjct: 70 AAVRPDEA---AFEMDYDPSHPAADANGYVKRS--NVKSLIQSMDMRDAQRAYEANLNVI 124
Query: 118 KKLNSM 123
+ SM
Sbjct: 125 ETTRSM 130
>gi|260438810|ref|ZP_05792626.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
2876]
gi|292808799|gb|EFF68004.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
2876]
Length = 145
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 13/129 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETILNQNFLM 54
IA+ R I+S NIANA+T Y +++ +F + N+
Sbjct: 8 NIAASGMTAQRLRTDIISGNIANANTTRTAEGGPYTRRNVLLTQKTSLNFGDVFNETLQG 67
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + + +N + D V V I NE+ YE N
Sbjct: 68 AGNGVKVVAITKDTETDYNLVYDPSHPDADENGYVKYPNVNIVNEMTDLIDATRSYEANA 127
Query: 115 KLIKKLNSM 123
SM
Sbjct: 128 TAFDASKSM 136
>gi|254516987|ref|ZP_05129045.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
NOR5-3]
gi|219674492|gb|EED30860.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
NOR5-3]
Length = 140
Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 16/141 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETIL------ 48
M +A+ + S+R +S N+ANA+ + YRA+ FET+L
Sbjct: 1 MSLFDAIGVAATSLDAQSQRLNTISSNLANANAVSSSAEETYRAQ-YPVFETMLNDLTTG 59
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
N +A T + +S+ + D+ + + N+V E+
Sbjct: 60 NGADGVAGVRVTGIAQSELPAVREYVPTHPLADDEGFIYRPAINSV---EEMANMMEASR 116
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
Y+ + + + +++ +
Sbjct: 117 SYQDSIEAMNTAKQLILRTLT 137
>gi|239826611|ref|YP_002949235.1| flagellar basal body rod protein FlgC [Geobacillus sp. WCH70]
gi|239806904|gb|ACS23969.1| flagellar basal-body rod protein FlgC [Geobacillus sp. WCH70]
Length = 150
Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 40/148 (27%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI------SSF 44
M I + R ++S N+AN T + YR K + F
Sbjct: 1 MSIFQSLDITASALTAQRLRMDVISSNMANVDTTHARLVNGQWEPYRRKFVVMEPRQEGF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNEL 100
T L + ++ + ++ P +G V E+
Sbjct: 61 STYLQAAMNSRSSVGNGVRVTKIMEDQTPFKLVYDPSHPDA--DPNGYVRLPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 119 VDLMSATRSYEANVTVFNATKGMLMKAL 146
>gi|317052365|ref|YP_004113481.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
S5]
gi|316947449|gb|ADU66925.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
S5]
Length = 151
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 28/140 (20%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-----------------SS 43
+I+S +R ++S N+ANA T Y+ KD+ +S
Sbjct: 7 LKISSSALFAQRQRMNVISSNLANAHTTRAEDGTYYKRKDLVFKPQTIHDDVRGKIFPAS 66
Query: 44 FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
FE + R + E D + ++ + N V E+
Sbjct: 67 FEEAWKKKIEGVRVEA--IIEDDEPPILKYDPSHPDADEEGYVAYPNINVV---EEMTDM 121
Query: 104 GHIKYLYELNTKLIKKLNSM 123
YE N +I+ + M
Sbjct: 122 ITASRSYEANITMIETIKKM 141
>gi|239817167|ref|YP_002946077.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
gi|239803744|gb|ACS20811.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
Length = 138
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 10/132 (7%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMAR 56
+ F +A S+R + + N+ANA + P+ YRAK + FE + +
Sbjct: 7 SMNIFSVAGSAMAAQSQRMNVTASNLANAESVAGPDGKPYRAKQVV-FEVDASGQQDIGG 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ E D S L D V + V + E+ Y+ N ++
Sbjct: 66 VKVAGVIE-DPSPLKMVFDPKNPHADAKGYVAMP--NVNVVEEMTNMISASRSYQANVEV 122
Query: 117 IKKLNSMVMHVV 128
+ ++++ +
Sbjct: 123 LNTAKTLMVKTL 134
>gi|197285509|ref|YP_002151381.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
gi|194682996|emb|CAR43444.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
Length = 251
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 15/120 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A E Q +V+ N+ANASTP ++A+ + + + T T S+
Sbjct: 7 TAMGGARHSMENQAVVANNLANASTPGFKAQ-----LSAMRAVPINGETLPTRTLTVAST 61
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGN---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ V +S N V + Y N + + + M+M
Sbjct: 62 PGSDQRQGTMNYTGRPMDVALSDNGYLAVQLE-------DGTQAYTRNGNIERNADGMLM 114
>gi|222053600|ref|YP_002535962.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
gi|221562889|gb|ACM18861.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
Length = 146
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD--------ISSFET 46
M T I++ R ++S N+ANA + Y+ KD + F +
Sbjct: 1 MDFFTSMDISASALTAERTRMNLISSNLANAGSTRTAEGGPYKRKDAVFAAEPVVEPFSS 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
IL + + + + D V+ V + E+
Sbjct: 61 ILKKAGGSMEPKQVGVVQITEDQTPPRLQYDPTHPDADAKGYVALPNVNVVEEMADMIAA 120
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 121 TRTYEANVTAAQAAKSMALKTL 142
>gi|32266907|ref|NP_860939.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
51449]
gi|32262959|gb|AAP78005.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
51449]
Length = 163
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 45/157 (28%), Gaps = 31/157 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R +S NIANA+T YR +++ F +LN+
Sbjct: 3 LSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEKLG 62
Query: 54 MARTHETHLKESDSSGLHWNAHVI-------------EAPLDQTTGVQVSGNT------- 93
+ + L PL + N+
Sbjct: 63 KNNQQLRYEDPLNEGDLGKEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVAYP 122
Query: 94 -VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V E+ Y+ N + +M + +
Sbjct: 123 NVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAIT 159
>gi|224373713|ref|YP_002608085.1| flagellar basal body rod protein FlgC [Nautilia profundicola AmH]
gi|223589296|gb|ACM93032.1| flagellar basal-body rod protein FlgC [Nautilia profundicola AmH]
Length = 165
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 49/162 (30%), Gaps = 36/162 (22%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILNQ 50
M F I+ + R I+SENIANA+T YR K++ FE LNQ
Sbjct: 1 MGFFNSFDISGYGLSAQRFRINIISENIANANTTRTDEGGPYRRKEVIFKAVPFEEQLNQ 60
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLD------------------QTTGVQVSGN 92
+ H E+ N V + P++ + N
Sbjct: 61 EIEQN--SKFHQYENPLDEEGENYAVAKPPIETVVVDKVVRDDSKPILKYDPSNPDADAN 118
Query: 93 ------TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ E+ Y+ N + +M +
Sbjct: 119 GYVAYPNINPVIEMADLLEATRAYQANVAAFQSAKTMANSAI 160
>gi|220905030|ref|YP_002480342.1| hypothetical protein Ddes_1767 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869329|gb|ACL49664.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 133
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 39/117 (33%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
Q+ + N S + + N+AN STP + + Q + + +
Sbjct: 9 QLGASAMNTHSWGMAVSAHNVANVSTPGFEPQRAVYATGPAGQGVRLDAVLQRNGPVGTG 68
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ A + S + + E+ ++ Y+ N ++ ++M+
Sbjct: 69 GTAYNAAQAVYDVTAGLPLEAASPSGTNLAREMVSMISTQHAYKANATTVRTADAML 125
>gi|212637783|ref|YP_002314308.1| flagellar basal-body rod protein FlgC [Shewanella piezotolerans
WP3]
gi|212559267|gb|ACJ31721.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
WP3]
Length = 139
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN----ASTPNYRAKDISSFETILNQNFLMAR 56
M +QIA N + R V+ N+AN A +P+ + + + + + +
Sbjct: 1 MSFSEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGQ 60
Query: 57 THETHLKESDSSGLHWNAHVIEAPL----DQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
H++ S + P D+ V S V E+ +E
Sbjct: 61 VAGAHVEVSAIVETDAPLDLRYEPDHPFADEQGYVAYS--NVNTVEEMADMMAASRSFET 118
Query: 113 NTKLIKKLNSMVMHVVR 129
+ +++ + SM +++
Sbjct: 119 SVEVMNRARSMQQGLLQ 135
>gi|121596118|ref|YP_988014.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
gi|222112273|ref|YP_002554537.1| flagellar basal-body rod protein flgf [Acidovorax ebreus TPSY]
gi|120608198|gb|ABM43938.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
gi|221731717|gb|ACM34537.1| flagellar basal-body rod protein FlgF [Acidovorax ebreus TPSY]
Length = 246
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
AN + RQ +++ N+ANAST +RA ++S+F ++ + +SG
Sbjct: 12 ANAAAHRQAVLANNLANASTTGFRA-EMSNFRSV---PLQGGGSTTRVFALEATSG---- 63
Query: 74 AHVIEAPLDQTTGVQVSGNTV 94
HV QTTG + V
Sbjct: 64 -HVDTPGPAQTTGRPLDAMAV 83
>gi|195953934|ref|YP_002122224.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
gi|195933546|gb|ACG58246.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
Length = 253
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
QP+ + + R +V+ NIANA TP ++ F + L A +
Sbjct: 6 QPMYVL---ASGMSLEQRRLDVVANNIANADTPGFK----KDFLSALAYYTPDATKEPGN 58
Query: 62 LKESDSSGLHWNA 74
++ S+ +
Sbjct: 59 APDNPSNNYVYPI 71
>gi|21672602|ref|NP_660669.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008458|sp|Q8K9K8|FLGC_BUCAP RecName: Full=Flagellar basal-body rod protein flgC
gi|21623233|gb|AAM67880.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 136
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 14/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---------PNYRAKDISSFETILNQN 51
M + IA + SE+ +++ N+ANA + P Y AK + L +
Sbjct: 1 MSLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYP-YIAKKVIFKLDPLKNS 59
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ + + + + L ++ PL G + N V +E Y+
Sbjct: 60 LIGGVKVFSIINDLNPMKLIYDPS---NPLSNKNGYVLQTN-VNPVSETINHISASRSYQ 115
Query: 112 LNTKLIKKLNSMVMHVV 128
N +++K SM+M +
Sbjct: 116 ANVEVLKTAKSMIMKTL 132
>gi|209545549|ref|YP_002277778.1| flagellar basal body rod protein FlgC [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533226|gb|ACI53163.1| flagellar basal-body rod protein FlgC [Gluconacetobacter
diazotrophicus PAl 5]
Length = 135
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFL 53
M +++ ER ++ +EN+AN T YR K I+ F+ L+Q
Sbjct: 1 MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTIT-FQATLDQASG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + + ++ A + + N++ E+ + ++ YE N
Sbjct: 60 VSSVKVKGIGQDNTPFQTKYDPSHPAADAKGYVKMPNVNSMV---EIMDTHEAQHSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
++ SM +
Sbjct: 117 LNTMQISRSMATRTI 131
>gi|153949008|ref|YP_001399632.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
IP 31758]
gi|152960503|gb|ABS47964.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
IP 31758]
Length = 141
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 16/141 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +++A + R ++ N+ANA +P Y+A+ F + +
Sbjct: 1 MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARS-PVFSAVYS---AR 56
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
A T ++ + L + + V + +E+
Sbjct: 57 AETEPQGIQSAQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASR 116
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM V++
Sbjct: 117 SFETNVEVLNSVKSMQQSVLK 137
>gi|34498342|ref|NP_902557.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
ATCC 12472]
gi|34104196|gb|AAQ60555.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
ATCC 12472]
Length = 136
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F I+ + S R +V+ N+ANA + Y+ + + ++
Sbjct: 1 MSLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQ 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
D S D+ V + V + E+ Y+ N
Sbjct: 61 VAGVRVTSVVEDQSPPRLKYEPGNPLADERGYVTMP--NVNVVEEMADMIAASRAYQNNV 118
Query: 115 KLIKKLNSMVMHVVR 129
+++ S++ ++
Sbjct: 119 EMMNTAKSLLQKTLQ 133
>gi|327441057|dbj|BAK17422.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
Length = 154
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 28/151 (18%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDIS------SF 44
++ F + A+ L+ R ++S NIAN T YR K ++ F
Sbjct: 1 MSIFHSMNTTASALTTQRLRMDVISSNIANVDTTRAKQVNGEWEPYRKKSVTLKEQEGQF 60
Query: 45 ETILNQNFLMARTHE-------THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
LN + + +KE + + VQ+S V +
Sbjct: 61 SNFLNMAIGKTEKNGIGNGVKVSSIKEDTETPFKLMYDPSHPDANAEGYVQMS--NVDVL 118
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N +M+ +
Sbjct: 119 KEMVDLISASRSYEANITAFNANKNMLTKAL 149
>gi|162147439|ref|YP_001601900.1| flagellar basal body rod protein FlgC [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786016|emb|CAP55598.1| putative flagellar basal-body rod protein flgC [Gluconacetobacter
diazotrophicus PAl 5]
Length = 135
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFL 53
M +++ ER ++ +EN+AN T YR K I+ F+ L+Q
Sbjct: 1 MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTIT-FQATLDQASG 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
++ + + ++ A + N++ E+ + ++ YE N
Sbjct: 60 VSSVKVKGIGQDNTPFQTKYDPSHPAADANGYVKMPNVNSMV---EIMDTHEAQHSYEAN 116
Query: 114 TKLIKKLNSMVMHVV 128
++ SM +
Sbjct: 117 LNTMQISRSMATRTI 131
>gi|148554191|ref|YP_001261773.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
gi|148499381|gb|ABQ67635.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
Length = 134
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANA-STPNYRAKDISSFETILNQNFLMARTHETHL 62
++ F IA + + R + N+ANA S +A+ + + + + +
Sbjct: 5 LSVFDIAGRAMSAQMVRLNTSASNLANAGSVAGSKAEAFRAIKPVFSSVTDAPGVATVKV 64
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIK 118
+ +S + GN V EL + Y+ N +++
Sbjct: 65 DQVVASNIEPTKRYDPNHPKAD----KDGNVWEAGVDQAQELVEMMETARQYQNNVSVMQ 120
Query: 119 KLNSMVMHVVR 129
++ + +R
Sbjct: 121 TAKTLTLDTLR 131
>gi|114320055|ref|YP_741738.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226449|gb|ABI56248.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
MLHE-1]
Length = 151
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 18/147 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F ++ N R V+ N+AN+ T YR++ +
Sbjct: 1 MSLFKVFDVSGSGMNAQQTRLNTVASNLANSETVAGSPEQAYRSRQPVFASVLQAAQQGQ 60
Query: 55 ARTHETHLKESDSSGLHWNAH------VIEAPLDQTTGVQVS------GNTVGITNELYK 102
A + H ++ + + PL Q + V E+
Sbjct: 61 AAGNPNHPGDARGTNVGVKVEDIVQSDAPVQPLYMPNHPQADEQGYVYRSNVNPVEEMTN 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVVR 129
Y+ N +++ +++ +R
Sbjct: 121 MISASRSYQNNVEVMNTSKELLLQTLR 147
>gi|203284214|ref|YP_002221954.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
gi|203287753|ref|YP_002222768.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
gi|201083657|gb|ACH93248.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
gi|201084973|gb|ACH94547.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
Length = 154
Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 38/147 (25%), Gaps = 19/147 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSF--E 45
M + AS R +++ NIAN T + + +S +
Sbjct: 3 MGLFSSINTASTGLTAQRLRLDVIANNIANVETTRTADGGAYRRERIIFAPRVVSPYWKG 62
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELY 101
+ + + D ++ G V + E+
Sbjct: 63 PFVPDYLDNGVGQGVRVSGIEKDKSPLKLQYDPTHPDAIKSGELKGYVEFPNVNVVEEMV 122
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 123 DMISASRAYEANSSVINSSKSMFRSAL 149
>gi|295111496|emb|CBL28246.1| flagellar basal-body rod protein FlgC [Synergistetes bacterium
SGP1]
Length = 139
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 40/136 (29%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M+ ++A +S N+AN +T Y+ + + F +L++
Sbjct: 1 MKVFDSMEVAGSALTAHRLWMDTISSNLANINTTRTLSGGPYKRR-VPVFAEMLDRTIGG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
R + + + P G N V + E+ YE
Sbjct: 60 YRDIGGVRVTAITEDRTAPRMTYQPDHPDADKDGYVAYPN-VNLVREMTDMLVASRAYEA 118
Query: 113 NTKLIKKLNSMVMHVV 128
N ++ M +
Sbjct: 119 NLSVVTTAREMWNGAL 134
>gi|170748652|ref|YP_001754912.1| flagellar basal body rod protein FlgC [Methylobacterium
radiotolerans JCM 2831]
gi|170655174|gb|ACB24229.1| flagellar basal-body rod protein FlgC [Methylobacterium
radiotolerans JCM 2831]
Length = 135
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA------KDISSFETILNQNFLM 54
M+ +A+ S R +I++ENIANA + A + I +F + L+
Sbjct: 1 MEFTKSLAVAAAGLKAQSGRMRIIAENIANADSAPASAGAQPYRRKIPTFTSHLDDETGA 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+K S+ A Q + V E + YE N
Sbjct: 61 RLVEAGRVKRDPSAFRTKYEPGNPAADAQGVVQMPN---VNALIENMDLREAQRSYEANL 117
Query: 115 KLIKKLNSMVMHVV 128
+I M+ +
Sbjct: 118 NMISATRKMLAQTL 131
>gi|291484170|dbj|BAI85245.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
natto BEST195]
Length = 150
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M +++ R +VS N+AN T YR K +S SF
Sbjct: 1 MTAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNEL 100
+ILN + +K S + + +++ P D G V E+
Sbjct: 61 SSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDA--NADGYVQKPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 119 VDLVSSTRSYEANVTAMNATKGMLMKAL 146
>gi|209966998|ref|YP_002299913.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
gi|209960464|gb|ACJ01101.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
Length = 655
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 16/128 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ +T AN+ + R +++++ I F+ ++ M +T
Sbjct: 540 FRDLTILASGEVVANYDNGRSRVLAQ--------------IPIFQ--VSNPNGMQKTDGN 583
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
+ SG + E + G+ V I +E K + Y NT+++
Sbjct: 584 AYVATTDSGAVRASGAGENGAGNLVVSSIEGSNVDIADEFTKLIVTQRAYSANTRVVTSA 643
Query: 121 NSMVMHVV 128
N M++ V+
Sbjct: 644 NDMLVEVL 651
>gi|78221651|ref|YP_383398.1| hypothetical protein Gmet_0430 [Geobacter metallireducens GS-15]
gi|78192906|gb|ABB30673.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length = 242
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLM----ARTHETHLKESDSSGLHWNA 74
+R ++S N+AN +TP ++ KD +FE++L T E+ +
Sbjct: 17 KRLDVLSNNLANVNTPGFK-KDRMTFESMLQTVGAQPRPGGGTDAPVFAETTFFTDYSPG 75
Query: 75 HVIEAPLDQTTGVQVSG 91
V + + G
Sbjct: 76 SVKQTGNPFDLAIDGDG 92
>gi|125972984|ref|YP_001036894.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
ATCC 27405]
gi|256004781|ref|ZP_05429756.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
2360]
gi|281417195|ref|ZP_06248215.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
JW20]
gi|125713209|gb|ABN51701.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
ATCC 27405]
gi|255991231|gb|EEU01338.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
2360]
gi|281408597|gb|EFB38855.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
JW20]
gi|316940780|gb|ADU74814.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
1313]
Length = 147
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 41/144 (28%), Gaps = 17/144 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M T I++ R +S+NIANA+T YR K + SF
Sbjct: 1 MGYFTSLDISASALTAQRLRMDTISQNIANANTTRTENGQPYRRKTVLFEEKSSTGSFSE 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSG 104
L + V + P G + N V + E+
Sbjct: 61 YLENSIRGKTAGAGVRVTGIVEDRSPFKRVYDPGHPDADEEGYVLMPN-VDVITEMVNMI 119
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N I + M +
Sbjct: 120 SATRAYEANITAINTTKGLAMKAL 143
>gi|258514001|ref|YP_003190223.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
DSM 771]
gi|257777706|gb|ACV61600.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
DSM 771]
Length = 140
Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 13/116 (11%)
Query: 23 IVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
I+S NIAN +T Y+ + + F L A+T ++ + + +
Sbjct: 23 IISNNIANLNTTRTAKGGPYK-RQMPVFSQRLQSVVDSAKTRAGGVEVNRVVQDNAPPRM 81
Query: 77 IEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ P GN + I NE+ + YE N ++ SM M +
Sbjct: 82 VYDPSHPDA--DQEGNVAYPNINIVNEMVNMMAARRAYEANATALEASKSMAMKAL 135
>gi|217077497|ref|YP_002335215.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
TCF52B]
gi|217037352|gb|ACJ75874.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
TCF52B]
Length = 137
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 11/137 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I++ + R ++S N+AN+ T YR + + F+ +L
Sbjct: 1 MNEFNIMTISATGMSAQRLRIDVISNNLANSETTRTENGEPYR-RKVPVFQELLRNINGR 59
Query: 55 ARTHETHLKES--DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+K+ D S D+ V++ V + E+ + + YE
Sbjct: 60 LENGGVVVKKIYEDKSPFRIVYDPTHPDADENGYVKLP--NVNVVREMVDMINAQRAYEA 117
Query: 113 NTKLIKKLNSMVMHVVR 129
N +M+ ++
Sbjct: 118 NVTAFNTTKAMINSALQ 134
>gi|238752868|ref|ZP_04614333.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
gi|238708907|gb|EEQ01160.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
Length = 141
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 14/140 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILN----- 49
M ++I+ + R ++ N+ANA +P Y+A+ F + +
Sbjct: 1 MSFNNIYRISGSAMTAQTIRLNTIASNLANAESPAASEATVYKARS-PVFSAVYSPRSAA 59
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ L ++ G + V V + +E+
Sbjct: 60 APGGVGGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFYPQ--VNVVSEMADMMSASRS 117
Query: 110 YELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM V+R
Sbjct: 118 FETNVEVLNSVKSMQQSVLR 137
>gi|119899029|ref|YP_934242.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
gi|119671442|emb|CAL95355.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
Length = 146
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 43/143 (30%), Gaps = 14/143 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + FQIA N S R + N+ANA + YRAK + + +
Sbjct: 1 MSMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPV 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TVGITNELYKSGHI 106
+ S + + N V + E+
Sbjct: 61 GGVRDKGAAASVGVQVTQVVESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISA 120
Query: 107 KYLYELNTKLIKKLNSMVMHVVR 129
Y+ N +++ +++ ++
Sbjct: 121 SRSYQNNAEVMNTAQTLLQRTLQ 143
>gi|296135675|ref|YP_003642917.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
gi|294339845|emb|CAZ88208.1| Flagellar basal-body rod protein flgC (Putative proximal rod
protein) [Thiomonas sp. 3As]
gi|295795797|gb|ADG30587.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
Length = 138
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 6/123 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M + +A+ S R +V+ N+ANA++ YRA+++ L+ +
Sbjct: 1 MSLFSALDVANSGLTAESYRLNVVASNLANANSAVSSNGQPYRAREVVFAAQPLSGPGVP 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + + VS V +E+ Y+ +
Sbjct: 61 AGVNGVQVAGVVEKPGPLKLVYEPGNPLANKDGYVSYPNVNPVDEMVNMISASRAYQADV 120
Query: 115 KLI 117
++
Sbjct: 121 NVM 123
>gi|294084420|ref|YP_003551178.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663993|gb|ADE39094.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 138
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 7/130 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLMARTH 58
F I+ + R ++ N+ANA YR+ + +
Sbjct: 6 NVFDISGRAMAAQMVRLNTIASNLANAGNLASSEDEAYRSMKPVFETRFADNVNDSGMST 65
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ + S ++ + P G S V + E + Y+ N +++
Sbjct: 66 TQVVGVTKLSRKPERIYMPDHPKSDAKGFVYSA-AVNVEEEFVEMLEASRQYQNNIEVVT 124
Query: 119 KLNSMVMHVV 128
L +++M +
Sbjct: 125 TLRALMMRTI 134
>gi|294013088|ref|YP_003546548.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum
UT26S]
gi|292676418|dbj|BAI97936.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum
UT26S]
Length = 262
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+A + + + ++++ N+AN +T ++ +D + FET+ Q + A + +
Sbjct: 6 LHVARTGLDAQNTKMRVIANNLANVNTTGFK-RDRADFETLAYQQIVAAGANSDSENKFA 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNE 99
+ + ++ ++ GNT+ + E
Sbjct: 65 TGLNLGSGVALQGTSKINAQGTLNQTGNTLDMAIE 99
>gi|288573035|ref|ZP_06391392.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568776|gb|EFC90333.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 140
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 11/137 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS---TP--NYRAKDISSFETILNQ----N 51
M+ +A+ +S+N+AN + TP + + F+ IL++
Sbjct: 1 MRVFKSIDVAASSLTAHRLWMDTISQNLANVNSSRTPEGGPYVRRVPVFQQILDEIGEDG 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ + + ++ DQ V + V + E+ YE
Sbjct: 61 KVKGGVKVVEIAKDTTTAPRLVYQPDHPDADQEGYVAMP--NVSVVREMADMMVASRAYE 118
Query: 112 LNTKLIKKLNSMVMHVV 128
N + SM +
Sbjct: 119 ANLAVTTSAKSMWTGAL 135
>gi|54307272|ref|YP_128292.1| putative FlgG flagellar basal-body rod protein [Photobacterium
profundum SS9]
gi|46911692|emb|CAG18490.1| Putative FlgG flagellar basal-body rod protein [Photobacterium
profundum SS9]
Length = 261
Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ KE+ +SG E L Q + + G+ V + E+ +
Sbjct: 178 FANAAGLQSLGGNLFKETGASGAPIEGVGGEDGLGQISQFSLEGSNVNVVEEMVNMITTQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ V +
Sbjct: 238 RAYEMNAKVVSSADQMLKFVSQ 259
>gi|308173581|ref|YP_003920286.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens DSM 7]
gi|307606445|emb|CBI42816.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens DSM 7]
gi|328553487|gb|AEB23979.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
TA208]
gi|328911722|gb|AEB63318.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus amyloliquefaciens LL3]
Length = 150
Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M I+ R +VS N+AN T YR K +S SF
Sbjct: 1 MSGFQSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYK 102
++LN + +K S + +++ P D V V E+
Sbjct: 61 SSLLNSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVD 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M++ +
Sbjct: 121 LVSSTRSYEANVTALNASKGMLLKAL 146
>gi|157959904|ref|YP_001499938.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
700345]
gi|157844904|gb|ABV85403.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
700345]
Length = 139
Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN----ASTPNYRAKDISSFETILNQNFLMAR 56
M +QIA N + R V+ N+AN A +P+ + + + + +
Sbjct: 1 MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGE 60
Query: 57 THETHLKESDSSGLHWNAHVIEAP----LDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
H++ S + P D+ V S V E+ +E
Sbjct: 61 LAGAHVEVSAIVQSDAPLDLRYEPNHPFADEQGYVAYS--NVNTVEEMADMMAASRSFET 118
Query: 113 NTKLIKKLNSMVMHVVR 129
+ +++ + SM +++
Sbjct: 119 SVEVMNRARSMQQGLLQ 135
>gi|149191151|ref|ZP_01869409.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
gi|148834989|gb|EDL51968.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
Length = 142
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 13/134 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + ++ A + + R +S N+ANA + P+ K + F + N
Sbjct: 1 MSFLGIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSKVYKPLKPIFSAVYNHFNAQE 60
Query: 56 RTHETHLK------ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
H+ + SS + + V SG V NE+
Sbjct: 61 TQHQGVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVV--NEMADMISATRS 118
Query: 110 YELNTKLIKKLNSM 123
+E + +++ + SM
Sbjct: 119 FEASVEVLGNVKSM 132
>gi|144897831|emb|CAM74695.1| Flagellar basal body rod protein:Protein of unknown function
DUF1078 [Magnetospirillum gryphiswaldense MSR-1]
Length = 273
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ ++ ++ Q+A W +++ N+ANA+TP Y+++ + E +++ T +
Sbjct: 30 MENTSYIALSRQNALWRQL--DVIAGNMANANTPGYKSEQMMFREYLMDTRSSDRATGKK 87
>gi|90415320|ref|ZP_01223254.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
HTCC2207]
gi|90332643|gb|EAS47813.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
HTCC2207]
Length = 141
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 10/137 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F IA+ N R + N+ANA T + A+D F+ +L ++ L
Sbjct: 1 MSISNIFGIAASAMNAQMVRMNSTASNMANAGTVSSSAEDAFKAKRPVFQALLQEHQLDQ 60
Query: 56 RTH----ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ L D + + H PL G S N V E+ + Y+
Sbjct: 61 GSQFLGGVKVLDMVDDTAPNKKMHDPGNPLADKDGFVFSSN-VNEVTEMVEMMGAARSYQ 119
Query: 112 LNTKLIKKLNSMVMHVV 128
N +++ ++M +
Sbjct: 120 NNVEVVNTARELMMRTL 136
>gi|89902475|ref|YP_524946.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
T118]
gi|89347212|gb|ABD71415.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
T118]
Length = 134
Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F ++ + S+R +V+ N+ANA Y+ + + FET+ +
Sbjct: 1 MSMFSIFNVSGSAISAQSQRLNVVASNLANADAVAGPDGQGYKGRQVV-FETVPMGSDAS 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + + ES+ + + D V S V E+ Y+ N
Sbjct: 60 SGVRVSSVSESNEPLRKVH-NPSHPSADADGYVTQS--NVNPIEEMVNMISASRSYQNNV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++++ ++
Sbjct: 117 EVMNTAKTLLLKTLQ 131
>gi|56551505|ref|YP_162344.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761149|ref|ZP_04759238.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260752888|ref|YP_003225781.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|4378856|gb|AAD19724.1| flagellar basal-body rod protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56543079|gb|AAV89233.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374768|gb|EER64229.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552251|gb|ACV75197.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 263
Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI---LNQNFLMARTHE 59
P T Q+A + + R +I++ N+AN +T ++ +D ++FET+ + T+
Sbjct: 2 PTTPLQVARTGLDAQNTRMRIIANNLANVNTTAFK-RDRAAFETLAYQAERQPGAQSTNS 60
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ + G E Q + V GN++ +
Sbjct: 61 YYYATGLTLGSGVQTIATERQETQGSFVNT-GNSLDL 96
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%)
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ T + E+ SSG + + ++ + V I EL +
Sbjct: 181 NPAGLQATGQNLYIETQSSGQPQIGLPQQDGMGYILQGELEQSNVNIVQELVDMIETQRA 240
Query: 110 YELNTKLIKKLNSMVMH 126
YE+N+K++K + M+ +
Sbjct: 241 YEVNSKMVKASDEMLQY 257
>gi|225181613|ref|ZP_03735054.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
AHT 1]
gi|225167721|gb|EEG76531.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
AHT 1]
Length = 136
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 7/133 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQNFLMART 57
MQ ++S R +++ NIANA T R +D ++ + + AR
Sbjct: 1 MQIFKAMNVSSSGLTAERFRLDLIANNIANAHTT--RTEDGGPYQRKSAVFAEVMDGARK 58
Query: 58 HETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
++ S + ++ P D V+ V I E+ YE N
Sbjct: 59 SGQGVRVQGVSVDNTEPRLVYEPEHPDANEEGYVAYPNVNIVQEMVDMITATRAYEANVT 118
Query: 116 LIKKLNSMVMHVV 128
+ +M + +
Sbjct: 119 ALNASKNMFLKAL 131
>gi|325567513|ref|ZP_08144180.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
12755]
gi|325158946|gb|EGC71092.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
12755]
Length = 233
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
+ S++ + L +RQ+ S NIAN +T Y+AK + F++ L++ L
Sbjct: 5 LDVLSRNISLLQKRQETTSCNIANVNTTGYQAKTL--FQSALDEVAL 49
>gi|326796599|ref|YP_004314419.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
MMB-1]
gi|326547363|gb|ADZ92583.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
MMB-1]
Length = 149
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 45/142 (31%), Gaps = 18/142 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F I+ + + R V+ NIAN + YRA+ F ++ ++
Sbjct: 1 MSLNNIFAISGSAMSAQTIRLNTVASNIANVDSVASSVDETYRARK-PVFAEMMEESMRE 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKS 103
+ + S A ++E+ + N V E+
Sbjct: 60 RGWRDVSDDDLQSGVGVQVAGIVESDAPLQPRYEPDHPMSNEEGYVFYPNVNPVEEMADM 119
Query: 104 GHIKYLYELNTKLIKKLNSMVM 125
++ N +++ SM+
Sbjct: 120 MSASRSFQTNVEVMNSAKSMMQ 141
>gi|292669794|ref|ZP_06603220.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
gi|292648591|gb|EFF66563.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
Length = 680
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R ++ NIAN +T ++A ++ F +++QN A + ++ + + V
Sbjct: 15 HQTRMDVIGNNIANVNTTGFKASRVT-FADMISQNLSGAASPNGNIGGVNPKQVGLGMSV 73
Query: 77 IEAPLDQTTG-VQVSGNTVGI 96
L T G VQ +G I
Sbjct: 74 ASTDLIYTNGSVQQTGKNTDI 94
>gi|288940407|ref|YP_003442647.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
180]
gi|288895779|gb|ADC61615.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
180]
Length = 139
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 11/132 (8%)
Query: 6 FFQIASQHANWLSERQKIVSENIANA--------STPNYRAKDISSFETILNQNFLMART 57
F ++ S R V+ N+ANA T YRAK + F+T+++Q
Sbjct: 7 IFNTSASALTAQSVRLNTVASNMANAAMTASTAEDT--YRAKHVL-FQTVIDQEDPNGVA 63
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ V + + E+ YE N +++
Sbjct: 64 MPVRVAGIVDDECEPIPTYEPNHPHANEEGYVFRPAINVVEEMANMMSASRSYEANVEVL 123
Query: 118 KKLNSMVMHVVR 129
S++ ++
Sbjct: 124 TTARSLLQRTLQ 135
>gi|46203395|ref|ZP_00051590.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
magnetotacticum MS-1]
Length = 293
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + N S R V+ENI NA+T Y+ + + F ++L + + +
Sbjct: 1 MSLIGVLRTGVSGMNAQSNRISTVAENIQNANTTGYK-RTSAEFSSLLLDSGDVGTYNSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITN 98
++ + + + D+ +Q +G V
Sbjct: 60 AVETTLRRSIGERGPISSTNSDKDLAIQGNGFFVVRDE 97
>gi|154686035|ref|YP_001421196.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
FZB42]
gi|154351886|gb|ABS73965.1| FlgC [Bacillus amyloliquefaciens FZB42]
Length = 150
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M I+ R +VS N+AN T YR K +S SF
Sbjct: 1 MSGFQSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYK 102
++L+ + +K S + +++ P D V V E+
Sbjct: 61 SSLLHSKMNGTGSAGNGVKVSGVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVD 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M++ +
Sbjct: 121 LVSSTRSYEANVTALNASKGMLLKAL 146
>gi|16078682|ref|NP_389501.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309494|ref|ZP_03591341.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313819|ref|ZP_03595624.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318743|ref|ZP_03600037.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323014|ref|ZP_03604308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315385|ref|YP_004207672.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
gi|120294|sp|P24501|FLGC_BACSU RecName: Full=Flagellar basal-body rod protein flgC
gi|142916|gb|AAA22442.1| flgC [Bacillus subtilis]
gi|2633991|emb|CAB13492.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. subtilis str. 168]
gi|320021659|gb|ADV96645.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
Length = 150
Score = 41.5 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M +++ R +VS N+AN T YR K +S SF
Sbjct: 1 MTAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYK 102
+ILN + +K S + + +++ P D + V V E+
Sbjct: 61 SSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVD 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 121 LVSSTRSYEANVTAMNATKGMLMKAL 146
>gi|224437870|ref|ZP_03658817.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
18818]
gi|313144319|ref|ZP_07806512.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
18818]
gi|313129350|gb|EFR46967.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
18818]
Length = 163
Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 31/157 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R +S NIANA+T YR +++ F ILN+
Sbjct: 3 LSSFDISGYGLSAQRVRVNTISSNIANANTTRTDEGGPYRRREVVFRAFDFNKILNEKLG 62
Query: 54 MARTHETHLKESDSSGLHWNAHVI-------------EAPLDQTTGVQVSGNT------- 93
+ + L PL + N+
Sbjct: 63 KNNQQLKYEDPLNEGDLGKEPKPAIMSVYIQKIVRDDREPLMKYDPSHPDANSEGYVAYP 122
Query: 94 -VGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V E+ Y+ N + +M + +
Sbjct: 123 NVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAIT 159
>gi|291288218|ref|YP_003505034.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
DSM 12809]
gi|290885378|gb|ADD69078.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
DSM 12809]
Length = 134
Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 11/134 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +A + R +S N+ANA+T Y +D+ F+ +L
Sbjct: 1 MSFFDVLGVAGTGMSAQRIRISAISANLANANTTRTDDGGPYVRQDVI-FKQVLEGELAG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+K+ L + +A + + E+ YE NT
Sbjct: 60 GVKVTEVVKDEKPPILKYEPGHPDADEEGYVAYP----NINPIEEMVNMLEASKSYEANT 115
Query: 115 KLIKKLNSMVMHVV 128
++ + M +
Sbjct: 116 TVVSTAKQLAMKAL 129
>gi|332981429|ref|YP_004462870.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
BON]
gi|332699107|gb|AEE96048.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
BON]
Length = 129
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 16/132 (12%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTP-----NYRAKDISSFETILNQNFLMA 55
+ F + A+ L+ R I+S+NIANA+T + + F + +
Sbjct: 1 MGMFDAINNSASGLTAQRLRMDIISQNIANANTTRTPEGGPYVRQMPVFSQSSSGMVQVQ 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
SD D V++ V +T E+ YE N
Sbjct: 61 A------IVSDPRPFKLTYDPSHPDADPNGYVRMP--NVDVTEEMVDMVSATRSYEANVT 112
Query: 116 LIKKLNSMVMHV 127
+I +M M
Sbjct: 113 VIDAAKNMAMRA 124
>gi|332799171|ref|YP_004460670.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
gi|332696906|gb|AEE91363.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
Length = 143
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 45/143 (31%), Gaps = 20/143 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDI-------SSFET 46
M I++ R +S NIANA+T P R + + SF
Sbjct: 1 MGFFNSLDISASGLTAQRLRLDTISNNIANANTTRTEEGGPFQRERVVFQERNTTGSFSN 60
Query: 47 ILNQN-FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
L+Q R + L+ H P +G + N V I E+
Sbjct: 61 YLDQQKPAGVRVVAIEKDTAPFKALYDPTH----PDADPSGYVMLPN-VNIVTEMVDMIS 115
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N I SM+ +
Sbjct: 116 ATRSYEANVTAINSAKSMMSKAL 138
>gi|225569955|ref|ZP_03778980.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
15053]
gi|225161425|gb|EEG74044.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
15053]
Length = 236
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL-KES 65
F AS+ A ++ ++S N AN +T Y+AK S F+ ++ N THL +
Sbjct: 5 FYTASRGARTQQDKLNVISNNFANVNTYGYKAKS-SVFQDLMYYNMRAGEGVATHLTSGT 63
Query: 66 DSSGLHWNAHVIEAPLDQTTG 86
+ H N + ++ L G
Sbjct: 64 GTVLDHTNTNFSQSGLGDGIG 84
>gi|302389656|ref|YP_003825477.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
DSM 16646]
gi|302200284|gb|ADL07854.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
DSM 16646]
Length = 147
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 44/145 (30%), Gaps = 20/145 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M+ +I++ R ++S NIAN +T YR + + F+ + L
Sbjct: 1 MEIFRSLEISASGLTAQRLRMDVISNNIANVNTTRTEEGGPYRRQRVI-FQE--RKRGLT 57
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAP-----LDQTTGVQVSGN------TVGITNELYKS 103
+ + + + + + P + + V I E+
Sbjct: 58 FKDVISGMSSTQPGAGVRVVSIEKDPSPFKLVYDPSHPDADQMGYVRMPNVNIVTEMVDM 117
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N I M+ +
Sbjct: 118 ISATRSYEANITAINSAKGMITKAL 142
>gi|288573021|ref|ZP_06391378.1| protein of unknown function DUF1078 domain protein
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568762|gb|EFC90319.1| protein of unknown function DUF1078 domain protein
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 875
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
A +R +V NIAN +T ++ K F+ +L+Q A + ++ ++ +
Sbjct: 10 SGAKAHQKRLDVVGNNIANVNTVGFK-KSTVVFQDLLSQTERGAMAPDGNVGGVNAKQVG 68
Query: 72 WNAHVIEAPLDQTTG-VQVSGNTVGITNE 99
V T G V +GN + +
Sbjct: 69 LGVQVAGIETIHTQGTVSQTGNRTDMAIQ 97
>gi|172058673|ref|YP_001815133.1| flagellar basal body rod protein [Exiguobacterium sibiricum
255-15]
gi|171991194|gb|ACB62116.1| flagellar basal body rod protein [Exiguobacterium sibiricum
255-15]
Length = 262
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTHETHLKESD 66
AS L +Q+++S N+ANA TP +RA + +F ++ Q + + +
Sbjct: 7 TASGAMQALQRQQEMLSNNLANARTPGFRADQASLRTFPEMMIQQSGVNEQSGVRSRGTV 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
P + +GN +
Sbjct: 67 GKLATGVFMQAATPNFALGSITETGNATDL 96
>gi|317011794|gb|ADU85541.1| flagellar basal body rod protein FlgC [Helicobacter pylori
SouthAfrica7]
Length = 161
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TV 94
+ + +T L S + PL + N V
Sbjct: 63 QNNQIIPYEDPLDESDDTPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|299068730|emb|CBJ39969.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
CMR15]
Length = 129
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 41/128 (32%), Gaps = 9/128 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANA------STPNYRAKDISSFETILNQNFLMARTHETH 61
+A S+R +V+ N+ANA YRAK + + + +
Sbjct: 2 DVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQETDGYATGVSVDRV 61
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++++ + + + V + +E+ Y+ N ++
Sbjct: 62 VEDTVTPMKRMHQPGNPLADADGYVTMPN---VDVVDEMVNMISASRSYQANVEVANTTK 118
Query: 122 SMVMHVVR 129
+M +
Sbjct: 119 TMAAKALT 126
>gi|302670716|ref|YP_003830676.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
B316]
gi|302395189|gb|ADL34094.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
B316]
Length = 149
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 37/146 (25%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M F I S R I+SENIANA+T + D ++ +T +
Sbjct: 1 MNIFDSFNINSSGMTAQRFRMDIISENIANANTTRTKDGDTPYTRKVVRFAEKGTQTPFS 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTG----------VQVSGN------TVGITNELYKSG 104
+ + D T N V E+
Sbjct: 61 RILNERLDHYSGRGVKVTQVQDDTWTQYNIVYDPSHPDADANGYVTYPNVNTVTEMTNLI 120
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVRG 130
YE N + RG
Sbjct: 121 DASRSYEANATAFDASKN---IAARG 143
>gi|222055648|ref|YP_002538010.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
gi|221564937|gb|ACM20909.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
Length = 139
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
+ +I++ R ++S N+ANA++ YR KD + F T+L+
Sbjct: 1 MDAMEISASALTAERTRMNLISSNLANANSTRTDEGGQYRRKD-AVFATVLDGASANMEG 59
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELN 113
+ + + + + G V I E+ YE N
Sbjct: 60 GTEVIGVEVVNIIEDQSPPRLQYDPGHPDAREDGYVAYPNVNIVEEMADMVTATRAYEAN 119
Query: 114 TKLIKKLNSMVMHVV 128
T +K M M +
Sbjct: 120 TTAMKAGMDMQMKAL 134
>gi|226327745|ref|ZP_03803263.1| hypothetical protein PROPEN_01618 [Proteus penneri ATCC 35198]
gi|225203449|gb|EEG85803.1| hypothetical protein PROPEN_01618 [Proteus penneri ATCC 35198]
Length = 160
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A E Q +V+ N+ANASTP ++A+ + + + T T S+
Sbjct: 7 TAMGGARHSMENQAVVANNLANASTPGFKAQ-----LSAMRAVPVNGDTLPTRTLTVAST 61
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGN---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ ++ V +S N V + Y N + + + M+M
Sbjct: 62 PGSDQSQGTMNYTGRSMDVALSDNGYLAVQLE-------DGTEAYTRNGNIQRNADGMLM 114
>gi|310659047|ref|YP_003936768.1| flagellar component of cell-proximal portion of basal-body rod
[Clostridium sticklandii DSM 519]
gi|308825825|emb|CBH21863.1| flagellar component of cell-proximal portion of basal-body rod
[Clostridium sticklandii]
Length = 146
Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 14/142 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M + I++ R ++S+N+ANA+T YR + + SF++
Sbjct: 1 MSIFSSINISASALTAERTRMDVISKNLANANTTRTQSGDPYRRQVVVFKEADEKQSFKS 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
I + + D V+ + V E+
Sbjct: 61 IFESKKSKDGDKGVEIVGIVEDKTPFRQVYNPGHPDADEKGYVTMSNVDTITEMVDMISA 120
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N + SM++ +
Sbjct: 121 TRSYEANVTALNTSKSMLLKAL 142
>gi|120597303|ref|YP_961877.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
gi|146294552|ref|YP_001184976.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
CN-32]
gi|120557396|gb|ABM23323.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
gi|145566242|gb|ABP77177.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
CN-32]
Length = 138
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 5/130 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIAN----ASTPNYRAKDISS-FETILNQNFLMARTHE 59
+QIA N + R V+ N+AN A TP + + F TI + A
Sbjct: 5 DIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGAIGAS 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ + + + V+ + V E+ +E + +++ +
Sbjct: 65 IEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEVMNR 124
Query: 120 LNSMVMHVVR 129
SM +++
Sbjct: 125 ARSMQQGLLQ 134
>gi|323492340|ref|ZP_08097493.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
20546]
gi|323313387|gb|EGA66498.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
20546]
Length = 144
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 16/142 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLM- 54
M + IA N + R V+ N+ANA P+ K + F T+ N+ L
Sbjct: 1 MSFTDIYSIAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYNKTQLTA 60
Query: 55 -------ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
A + +S+ D+ V + +E+
Sbjct: 61 SEGAYPNAEVRIVDVVQSEGKAEKRFEPSNPLANDEGYVYYPD---VDVVSEMADMMSAT 117
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM +++
Sbjct: 118 RSFETNVEVLTNVKSMQQGLLK 139
>gi|224825775|ref|ZP_03698879.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
gi|224601999|gb|EEG08178.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
Length = 140
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 13/135 (9%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTH 58
+IA + R V+ N+ANA + + +RA+ F T+
Sbjct: 5 DISRIAGSAMTAQTVRLNTVASNLANAESASGSEGAAFRARK-PVFATVYRGADSDGAWQ 63
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNT 114
++ D + P + GN V E+ ++ N
Sbjct: 64 GASVQVLDVVKSDSPLRKVHEPSNPLA--DADGNVFYPNVNPVEEMTDMMSASRAFQTNV 121
Query: 115 KLIKKLNSMVMHVVR 129
+++ ++ +M +++
Sbjct: 122 EVLARVKTMQQDLLK 136
>gi|307718596|ref|YP_003874128.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
6192]
gi|306532321|gb|ADN01855.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
6192]
gi|315186391|gb|EFU20151.1| flagellar basal-body rod protein FlgC [Spirochaeta thermophila DSM
6578]
Length = 152
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 26/151 (17%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDI------------ 41
M T IA+ R ++S NIANA+T P R++ +
Sbjct: 1 MGLFTPINIAATGLTAQRLRMDVISNNIANATTTRTTEGGPFRRSRVVFRPRVEQPYWRS 60
Query: 42 ----SSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
+ L + + + + + ++ + I++ + + N V
Sbjct: 61 PFLPKPLDNGLGKGVRVVKVEKDYDAKTRLVYDPTHPDAIKSGPLKGYVEYPNVNIVN-- 118
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N ++ +M + +
Sbjct: 119 -EMVDLIDASRAYEANLAVVNGSKTMFLKAL 148
>gi|157147104|ref|YP_001454423.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
BAA-895]
gi|157084309|gb|ABV13987.1| hypothetical protein CKO_02881 [Citrobacter koseri ATCC BAA-895]
Length = 141
Score = 41.1 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 14/140 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M ++++ + R ++ N+ANA T + Y+A+ F + + LM
Sbjct: 1 MAFTDIYRVSGSAMTAQTVRLNTIASNLANAETASATEDGVYKARR-PVFAAVYKNDELM 59
Query: 55 -----ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ ++ + V V + E+
Sbjct: 60 NSRALTGARVQVMDVVETGNAVQRYEPHNPMANTDGYVYYP--DVNVVEEMADMMSASRG 117
Query: 110 YELNTKLIKKLNSMVMHVVR 129
+E N ++ + SM ++R
Sbjct: 118 FETNVDVLNSVKSMQQSLLR 137
>gi|315452789|ref|YP_004073059.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
gi|315131841|emb|CBY82469.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
Length = 163
Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 31/156 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILN+
Sbjct: 3 LSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAIFKSFDFNKILNEKLA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLD----QTTGVQVSGN------ 92
+ + E +G++ V + T N
Sbjct: 63 QNNNLMEYEDPLDESDEIEKPNPPITGVYIEKIVRDDKAPLLKYDPTHPDADANGYVSYP 122
Query: 93 TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N + +M + +
Sbjct: 123 NVNPVVEMADLIEATRAYQANVAAFQSTKNMATNAI 158
>gi|158320510|ref|YP_001513017.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
OhILAs]
gi|158140709|gb|ABW19021.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
OhILAs]
Length = 147
Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 25/148 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDI-SSFET 46
M I++ R I ++NIANA+T ++ KD + F
Sbjct: 1 MSIFNSLNISASGLTAERLRMDIATKNIANANTTRTSNGTPYRRQVVVFKTKDAPTPFSE 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNEL 100
L ++ + + + S + + ++ + N V I E+
Sbjct: 61 HLKRSGG----SPSKMNGVEVSSIQNDTAPYKSVYE-PGHPDADENGYVKMPNVDIMTEM 115
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 116 ANMISASRAYEANITAMNGTKSMFLKTL 143
>gi|309388815|gb|ADO76695.1| flagellar basal-body rod protein FlgC [Halanaerobium praevalens DSM
2228]
Length = 143
Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 36/136 (26%), Gaps = 17/136 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETH 61
I++ R +S NIANA T YR + F L A
Sbjct: 6 DISASGLTAQRLRMDTISSNIANAETTRDENGNTYR-RKTPIFRQKLENKMGAAEV-GNG 63
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN--------TVGITNELYKSGHIKYLYEL 112
+ ++P N V + E+ YE
Sbjct: 64 SSLNSGGVEVDQIAEDQSPFRLEYRPNHPDANEEGYVELPNVSVMTEMVNMIDASRAYEA 123
Query: 113 NTKLIKKLNSMVMHVV 128
NT+ I SM +
Sbjct: 124 NTQAISNYKSMANSAL 139
>gi|148980304|ref|ZP_01815991.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
gi|145961323|gb|EDK26633.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
Length = 142
Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 13/134 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISSFETILNQNFLMAR 56
M + ++ A + + R +S N+ANA + P+ K + + + +F +
Sbjct: 1 MAFLGIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSQVYKPLKPIFSAVYNHFNAQQ 60
Query: 57 THETHLKESD-------SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
T + + SS + + V SG V NE+
Sbjct: 61 TQQQGVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVV--NEMADMISATRS 118
Query: 110 YELNTKLIKKLNSM 123
+E + +++ + SM
Sbjct: 119 FEASVEVLGNVKSM 132
>gi|291519599|emb|CBK74820.1| flagellar basal-body rod protein FlgC [Butyrivibrio fibrisolvens
16/4]
Length = 151
Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 26/145 (17%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------P-----------NYRAKDIS 42
M F I + R I++ENIAN ST P NY A I
Sbjct: 1 MGLFQPFDIVATGLTAQRFRMDIIAENIANVSTTRTQNGGPYRRKIVTFTEKNYHA-GIP 59
Query: 43 SFETILNQNFLMARTHE---THLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITN 98
+F+ +L L + + + E + D+ V+ + NTV
Sbjct: 60 NFKNVLKDKQLRFYGNGVKVSKVSEDTETDFIMEYDPSHPDADENGYVRYPNVNTV---T 116
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSM 123
E+ YE N + SM
Sbjct: 117 EMTNLIDASRSYEANVTAFDAIKSM 141
>gi|167040321|ref|YP_001663306.1| hypothetical protein Teth514_1684 [Thermoanaerobacter sp. X514]
gi|300914405|ref|ZP_07131721.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
gi|307724359|ref|YP_003904110.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
gi|166854561|gb|ABY92970.1| protein of unknown function DUF1078 domain protein
[Thermoanaerobacter sp. X514]
gi|300889340|gb|EFK84486.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
gi|307581420|gb|ADN54819.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
Length = 417
Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKAHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|22127330|ref|NP_670753.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
gi|45442794|ref|NP_994333.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
Microtus str. 91001]
gi|51597639|ref|YP_071830.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
IP 32953]
gi|108809057|ref|YP_652973.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
gi|108810746|ref|YP_646513.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
gi|145597815|ref|YP_001161891.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
gi|150260251|ref|ZP_01916979.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
gi|162418952|ref|YP_001604849.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
gi|165924966|ref|ZP_02220798.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939065|ref|ZP_02227617.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008997|ref|ZP_02229895.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166212219|ref|ZP_02238254.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167398642|ref|ZP_02304166.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167418994|ref|ZP_02310747.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425145|ref|ZP_02316898.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167466343|ref|ZP_02331047.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
gi|170022969|ref|YP_001719474.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
YPIII]
gi|186896773|ref|YP_001873885.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
PB1/+]
gi|218927910|ref|YP_002345785.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
gi|229837406|ref|ZP_04457569.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
gi|229840619|ref|ZP_04460778.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842830|ref|ZP_04462982.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900943|ref|ZP_04516067.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
gi|270487675|ref|ZP_06204749.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
gi|294502786|ref|YP_003566848.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|21960411|gb|AAM87004.1|AE013948_12 flagellar biosynthesis protein, cell-proximal portion of basal-body
rod [Yersinia pestis KIM 10]
gi|45437660|gb|AAS63210.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Microtus str. 91001]
gi|51590921|emb|CAH22577.1| Putative flagellar basal-body rod protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774394|gb|ABG16913.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
gi|108780970|gb|ABG15028.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
gi|115346521|emb|CAL19397.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
gi|145209511|gb|ABP38918.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
gi|149289659|gb|EDM39736.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
gi|162351767|gb|ABX85715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
gi|165913021|gb|EDR31646.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923166|gb|EDR40317.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992336|gb|EDR44637.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166206965|gb|EDR51445.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962988|gb|EDR59009.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051146|gb|EDR62554.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055908|gb|EDR65689.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749503|gb|ACA67021.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
YPIII]
gi|186699799|gb|ACC90428.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
PB1/+]
gi|229682282|gb|EEO78374.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
gi|229690097|gb|EEO82154.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696985|gb|EEO87032.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705529|gb|EEO91539.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
gi|262360818|gb|ACY57539.1| flagellar basal body rod protein [Yersinia pestis D106004]
gi|270336179|gb|EFA46956.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
gi|294353245|gb|ADE63586.1| flagellar basal body rod protein [Yersinia pestis Z176003]
gi|320016713|gb|ADW00285.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 141
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 18/142 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILN----- 49
M +++A + R ++ N+ANA +P Y+A+ F + +
Sbjct: 1 MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARS-PVFSAVYSARTAA 59
Query: 50 --QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ A+ + E S + + A V + +E+
Sbjct: 60 DPRGVQSAQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYP----AVNVVSEMADMMSAS 115
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM V++
Sbjct: 116 RSFETNVEVLNSVKSMQQSVLK 137
>gi|326389474|ref|ZP_08211041.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325994479|gb|EGD52904.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 417
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKAHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|126176158|ref|YP_001052307.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
gi|304412510|ref|ZP_07394116.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
gi|307307169|ref|ZP_07586907.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
gi|125999363|gb|ABN63438.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
gi|304349152|gb|EFM13564.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
gi|306910408|gb|EFN40839.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
Length = 138
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 5/130 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMARTHE 59
+QIA N + R V+ N+ANA T P + + F TI + A
Sbjct: 5 DIYQIAGAGMNAQTIRLNTVASNLANAGTAAENPESAYRALKPVFATIYDSTQQGAIGAS 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ + + + V+ + V E+ +E + +++ +
Sbjct: 65 IEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEIMNR 124
Query: 120 LNSMVMHVVR 129
SM +++
Sbjct: 125 ARSMQQGLLQ 134
>gi|327478807|gb|AEA82117.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
4166]
Length = 142
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 15/137 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETI-----LNQNFLM 54
+ ++IA N + R V+ N+AN + D+ F + L + +
Sbjct: 5 SIYRIAGSSMNAQTVRLNTVASNLANTDSAAANPADVYQARKPMFAAVYENNSLTRGVGL 64
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSGHIKYLYEL 112
H L S + PL G N + E+ +E
Sbjct: 65 GGAHVQVLDVVTSGAEPKRRYEPGNPLADGEGYVYYPDINEI---EEMTDMMSATRSFET 121
Query: 113 NTKLIKKLNSMVMHVVR 129
+++ ++ SM ++R
Sbjct: 122 GVEVLNRVKSMQQSLLR 138
>gi|269836598|ref|YP_003318826.1| hypothetical protein Sthe_0566 [Sphaerobacter thermophilus DSM
20745]
gi|269785861|gb|ACZ38004.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
thermophilus DSM 20745]
Length = 247
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 20 RQKIVSENIANASTPNYRAK--DISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
RQ +SEN+AN STP Y+A+ + F + F + +
Sbjct: 18 RQLTISENLANVSTPGYKARRTTVQDFREMFLSRFAGGSATPIGSISTAVRPEERAIDLS 77
Query: 78 EAPLDQTTGV 87
+ L +T
Sbjct: 78 QGALVETGRP 87
>gi|94263245|ref|ZP_01287062.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
MLMS-1]
gi|93456463|gb|EAT06583.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
MLMS-1]
Length = 144
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 16/142 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M +T I+ R I S N+ANA+T YRAK + F T
Sbjct: 1 MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEARPLERDFNT 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
L R E D + D+ V+ V ++ +
Sbjct: 61 TLQGAASRLRKVEVVEVVEDRAPFREVYEPHHPDADENGIVRYP--NVNTAEQMVDMMNA 118
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
+ YE N + + M + +
Sbjct: 119 RRSYEANVAALDAVKEMALRAL 140
>gi|222053731|ref|YP_002536093.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
gi|221563020|gb|ACM18992.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
Length = 244
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R ++S N+ANA+T ++ D FE++L + ++ + S +
Sbjct: 18 RLDVISNNLANANTAGFKG-DRLQFESVLASSKSQSQAAASPNDSPVFSSEIFFTDYSPG 76
Query: 80 PLDQTTGVQVSGNT--VGIT 97
PL QT GNT V +
Sbjct: 77 PLKQT------GNTLDVALD 90
>gi|220932517|ref|YP_002509425.1| flagellar hook protein FlgE, epsilon proteobacterial
[Halothermothrix orenii H 168]
gi|219993827|gb|ACL70430.1| flagellar hook protein FlgE, epsilon proteobacterial
[Halothermothrix orenii H 168]
Length = 519
Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ NIAN +T Y++ ++ F+ +L+Q A+ + + +
Sbjct: 10 SGLKAHQTRMDVIGNNIANVNTVGYKSSSVT-FKEMLSQTLRGAKAPQGGRGGVNPMQVG 68
Query: 72 WNAHVIEAPLDQTTG-VQVSGNTVGITNE 99
V +D T G +Q +G T + +
Sbjct: 69 LGVGVGSITVDHTQGNLQPTGVTTDLAIQ 97
>gi|317182784|dbj|BAJ60568.1| flagellar basal body rod protein FlgC [Helicobacter pylori F57]
Length = 161
Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D S + + +D+ N V
Sbjct: 63 QNHQITPYEDPLDESDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|168334478|ref|ZP_02692649.1| Flagellar basal body rod protein [Epulopiscium sp. 'N.t. morphotype
B']
Length = 153
Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 21/142 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANAS---TPN---YRAKDI---------------SSFET 46
IA+ R ++++N+AN + TP+ Y+ + + +F
Sbjct: 8 DIAATGLTAQRFRLDVITQNLANINSTRTPDGGPYQRRTVLFESIPMRDAANKLPDNFHN 67
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
ILN+N M T + + D V V + E+
Sbjct: 68 ILNRNLNMYHTSGVQVSGIVEDDTPFPLIFDPTHPDANEEGYVEMPNVDVVTEMVNMISA 127
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N L SM +
Sbjct: 128 SRSYEANVTAFNNLKSMNTKAL 149
>gi|126653751|ref|ZP_01725669.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
gi|126589715|gb|EAZ83851.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
Length = 153
Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 43/149 (28%), Gaps = 24/149 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDISSFETILNQ 50
++ F + A+ L+ R ++S N+AN T YR K ++
Sbjct: 1 MSIFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTFTAQEGQF 60
Query: 51 NFLMARTHETHLKESDSSGLHWN--AHVIEAPLDQTTGVQV-SGN--------TVGITNE 99
+ M K +G+ A E P N V E
Sbjct: 61 SKFMNVALGKDAKSGVGNGVKVTRIAEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKE 120
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ YE N + SM+ +
Sbjct: 121 MVDLMSATRSYEANVTVFNANKSMLTKAL 149
>gi|167725928|ref|ZP_02409164.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
DM98]
gi|167905088|ref|ZP_02492293.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
NCTC 13177]
Length = 125
Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 14 ANWLSERQKIVSENIANASTPN------YRAKDISSFETI--LNQNFLMARTHETHLKES 65
+ + R ++ N+ANA + + YRA+ F +I L+ L
Sbjct: 1 MSAQTVRLNTIASNLANADSASGTEDATYRARK-PVFASIFQLDAQGEPRGAAVQVLDVV 59
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
S+ H PL G + N V E+ Y N +++ ++N M +
Sbjct: 60 KSTEPLRKVHQPGHPLADAEGNVLYPN-VNPVEEMTDMLSASRAYSTNVEVLGRVNGMQL 118
Query: 126 HVVR 129
+++
Sbjct: 119 ELLK 122
>gi|167037660|ref|YP_001665238.1| hypothetical protein Teth39_1248 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116075|ref|YP_004186234.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856494|gb|ABY94902.1| protein of unknown function DUF1078 domain protein
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929166|gb|ADV79851.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 417
Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKAHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|307264876|ref|ZP_07546438.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306920134|gb|EFN50346.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 417
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKAHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|296330833|ref|ZP_06873308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674351|ref|YP_003866023.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296151838|gb|EFG92712.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412595|gb|ADM37714.1| flagellar component of cell-proximal portion of basal-body rod
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 150
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 18/146 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M +++ R +VS N+AN T YR K +S SF
Sbjct: 1 MTAFHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWMPYRRKMVSLQSKGESF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYK 102
+ILN + +K S + +++ P D + V V E+
Sbjct: 61 SSILNSQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDANAEGYVQKPNVDPLKEMVD 120
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 121 LVSSTRSYEANVTAMNATKGMLMKAL 146
>gi|121533765|ref|ZP_01665592.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
Nor1]
gi|121307756|gb|EAX48671.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
Nor1]
Length = 143
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 42/142 (29%), Gaps = 17/142 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M T A+ R ++S NIANA+T YR + + +SF
Sbjct: 1 MGLFTAIDAAASGMTAERLRMDVISNNIANANTTRTPEGGPYRRQMVIFQPRAGQNSFAD 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
+L+ + + ++ + V I E+
Sbjct: 61 LLSGKVENVGVRVVGIVKDEAPFRQVFDPNHPDANAAGYVAMPN---VNIIAEMVDMMTA 117
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N I SM + +
Sbjct: 118 ARAYEANVTAINAAKSMALKAL 139
>gi|312115251|ref|YP_004012847.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
ATCC 17100]
gi|311220380|gb|ADP71748.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
ATCC 17100]
Length = 139
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANAS----TPNYRA--KDISSFETILNQNFL 53
M ++ IA + S+R ++ +EN+AN+ TP + I SF+ L+
Sbjct: 3 MDNLSASLAIAGSGLSAQSQRIRVATENLANSESTGKTPGALPYTRKILSFDQELDAATG 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ S N A Q + V + EL YE N
Sbjct: 63 AELVIIGDVDADRSPYRIENIPGHPAADAQGNVKLPN---VNVLVELADIREGTRSYEAN 119
Query: 114 TKLIKK 119
++IK+
Sbjct: 120 LQVIKQ 125
>gi|256750749|ref|ZP_05491634.1| protein of unknown function DUF1078 domain protein
[Thermoanaerobacter ethanolicus CCSD1]
gi|256750332|gb|EEU63351.1| protein of unknown function DUF1078 domain protein
[Thermoanaerobacter ethanolicus CCSD1]
Length = 417
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKAHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|326386932|ref|ZP_08208546.1| flagellar basal body rod protein FlgG [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208612|gb|EGD59415.1| flagellar basal body rod protein FlgG [Novosphingobium
nitrogenifigens DSM 19370]
Length = 262
Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH- 61
P + +A R ++++ N+AN ST ++ +D ++F ++ Q+ +A ++
Sbjct: 2 PSSALYVARTGLEAQDTRMRVIANNLANVSTTGFK-RDRANFASLAYQDARVAGAQSSNE 60
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS-GNTVGI 96
+ L + D T G S GN + +
Sbjct: 61 TTYATGLNLGTGVGIQSTTPDMTEGSLQSTGNALDL 96
>gi|297570257|ref|YP_003691601.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296926172|gb|ADH86982.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 118
Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 12/103 (11%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
L ++ + N AN +T Y+ ++ E + +
Sbjct: 15 LQQKTAATAHNTANVNTDGYKKVRVTLHEGVAPGTVEPRAEKIETPGPVVQEQTAAGPEM 74
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+E V + E+ + Y+ N K+++
Sbjct: 75 VEKS------------NVDLAQEMPNLMLSRRYYQANLKVVQS 105
>gi|296124187|ref|YP_003631965.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
3776]
gi|296016527|gb|ADG69766.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
3776]
Length = 137
Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFET--ILNQNFLMARTHETHL 62
I++ R ++ NIAN +T I+ F+ ++ Q + T T
Sbjct: 3 HTLDISTSGLIAQRTRMDTIAGNIANVNTTQNEEGKIAPFQRRLVMMQPASVGATSPTGS 62
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLYELNTKLI 117
+ S+ + + V + E + YE N +
Sbjct: 63 QGVASTVEIDTVSPPRMAYEPGHPHANAEGKVLYPNINVVTEFVNAMEASRAYEANVTTM 122
Query: 118 KKLNSMVMHVVR 129
+ M+ + R
Sbjct: 123 EVTKDMIQNTFR 134
>gi|158422269|ref|YP_001523561.1| flagellar basal body rod protein FlgF [Azorhizobium caulinodans
ORS 571]
gi|158329158|dbj|BAF86643.1| flagellar basal body rod protein [Azorhizobium caulinodans ORS
571]
Length = 240
Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
+R ++ N+AN +TP YRA++I F +I+ +
Sbjct: 16 EKRMATIANNVANMNTPGYRAEEIK-FSSIMAEQGA 50
>gi|119503642|ref|ZP_01625725.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
HTCC2080]
gi|119460704|gb|EAW41796.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
HTCC2080]
Length = 134
Score = 40.3 bits (93), Expect = 0.078, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 11/134 (8%)
Query: 4 ITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
++ F IA + + R ++ N+ANA++ + A+D F+ +L
Sbjct: 1 MSLFDSMSIAGTALSAQTTRINTIASNMANANSVSSTAEDTFKARAPIFQAVLEGESDQL 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T ++E ++ + + +T ++ ++ +
Sbjct: 61 GVRVTSIEEVGGEARQEFEPAHPLANEEGFIYKPD---IDVTQQMANMMSASRSFQSAIE 117
Query: 116 LIKKLNSMVMHVVR 129
+I + + +
Sbjct: 118 VINTSKQLALRTLT 131
>gi|15646165|ref|NP_208349.1| flagellar basal body rod protein FlgC [Helicobacter pylori 26695]
gi|217031711|ref|ZP_03437215.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
gi|298737153|ref|YP_003729683.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
gi|2314741|gb|AAD08598.1| flagellar basal-body rod protein (flgC) [Helicobacter pylori 26695]
gi|216946558|gb|EEC25158.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
gi|298356347|emb|CBI67219.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
Length = 161
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNNQITPYEDPLDEGDEYPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|114320059|ref|YP_741742.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226453|gb|ABI56252.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
MLHE-1]
Length = 261
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH---------- 58
+A + R ++VS N+AN +T ++ KD ++FE ++ Q A
Sbjct: 7 VAKTGLDAQQTRMQVVSNNLANVNTTGFK-KDRANFEDLIYQTVRQAGGQSTQDTLLPTG 65
Query: 59 ---ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
T ++ + + +H ++ + ++ G
Sbjct: 66 LNLGTGVRVTSTEKIHMQGNIQQTENSLDIAIEGDG 101
>gi|260767772|ref|ZP_05876707.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
gi|260617281|gb|EEX42465.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
Length = 54
Score = 40.3 bits (93), Expect = 0.079, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P TG GNTV + E + ++ + + + ++G
Sbjct: 3 YRVPTQPDTG---DGNTVDVDLERNLFMQNQLRHQASLDFLGSKFKNLTKAIKG 53
>gi|103488389|ref|YP_617950.1| flagellar basal body rod protein FlgG [Sphingopyxis alaskensis
RB2256]
gi|98978466|gb|ABF54617.1| Flagellar basal-body rod FlgG [Sphingopyxis alaskensis RB2256]
Length = 261
Score = 40.3 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----- 57
+ +A + S R ++++ N+AN +T ++ +D +SFET+ Q A
Sbjct: 2 SLGALHVARTGLDAQSFRMQVIANNLANVNTTGFK-RDRASFETLSYQLMTQAGAPSTAE 60
Query: 58 --HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
+ T L L+ A + QTTG + V I
Sbjct: 61 NRYATGLNLGTGVALNGTARIDTQGTFQTTGNGLD---VAID 99
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ + L E+ +SG E G + G+ V + EL +
Sbjct: 178 FSNPAGLQAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N+K+I + M+ + +
Sbjct: 238 RAYEVNSKMISATDEMMKNASQ 259
>gi|78042758|ref|YP_359838.1| flagellar basal-body rod protein FlgC [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994873|gb|ABB13772.1| flagellar basal-body rod protein FlgC [Carboxydothermus
hydrogenoformans Z-2901]
Length = 138
Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQ--NF 52
M + FQI + + +NIANA+T P Y KD+ FE IL F
Sbjct: 1 MAFFSSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVI-FEEILEAKAGF 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + E + + + D TG+ N V I +E+ + YE
Sbjct: 60 KGGGVRVSQIVEDTKTPYRYVFNPNHPDADPNTGLVKYPN-VNINDEIVNLLAAQRAYEA 118
Query: 113 NTKLIKKLNSMVMHVV 128
N + +M +
Sbjct: 119 NVTVFNTAKAMYAKAL 134
>gi|317010250|gb|ADU80830.1| flagellar basal body rod protein FlgC [Helicobacter pylori India7]
Length = 161
Score = 40.3 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TV 94
+ + L S + PL + N V
Sbjct: 63 QNHQITPYEDPLDEGDDNSLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|313905141|ref|ZP_07838510.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
6]
gi|313470044|gb|EFR65377.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
6]
Length = 151
Score = 40.3 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M + F I++ + R I +ENIAN T Y KD+ ++F
Sbjct: 1 MSFLDSFDISASGMSAQRIRLDIAAENIANVDTTRTENGGPYIRKDVVLASYGKKTTFAN 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNEL 100
L + T + +G+ + + + T N V +T E
Sbjct: 61 ALRAARTGSSVISTGKRGVRVAGITDDTRETKRVYN-PTHPDADVNGYVEMPNVDVTKET 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHV 127
+ YE N + + M
Sbjct: 120 VDAMSATRSYEANVTALNAIKMMTQKA 146
>gi|167614835|ref|ZP_02383470.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
Bt4]
Length = 125
Score = 40.3 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 14 ANWLSERQKIVSENIANASTPN------YRAKDISSFETI--LNQNFLMARTHETHLKES 65
+ + R ++ N+ANA + YRA+ F +I L+ L
Sbjct: 1 MSAQTVRLNTIASNLANADAASGAEDSTYRARK-PVFASIFQLDAQGEPRGAAVQVLDVV 59
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
S+ H PL G + N V E+ Y N +++ ++NSM +
Sbjct: 60 KSTEPLRKVHQPGHPLADAEGNVLYPN-VNPVEEMTDMLSASRAYSTNVEVLGRVNSMQL 118
Query: 126 HVVR 129
+++
Sbjct: 119 ELLK 122
>gi|205373369|ref|ZP_03226173.1| flagellar basal body rod protein FlgC [Bacillus coahuilensis m4-4]
Length = 149
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M I++ R ++S N+ANA T Y K + +F
Sbjct: 1 MSIFQSINISTSALTAQRLRMDVISSNVANADTTRGEYVNGEWQPYTRKSVVLQENQGNF 60
Query: 45 ETILNQNFLMARTHE---THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
++LNQ + +KE + + D V++ V E+
Sbjct: 61 SSLLNQAKNTGSVNGVVVKEIKEDTETPFNLVFDPTHPDADAEGYVKMP--NVDPLREMT 118
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ +++M +
Sbjct: 119 DLISATRSYEANVTVMNANKALLMKSL 145
>gi|85706167|ref|ZP_01037262.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
gi|85669331|gb|EAQ24197.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
Length = 261
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQNFLMARTHET 60
+ +IA+ R + +S N+AN ST Y A+ + L + + T T
Sbjct: 1 MHILKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFADLHYQQLARAGTINATDGT 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-TVGIT 97
L GL I L Q + Q +G+ V I
Sbjct: 61 VLPTGVQLGLGVRPAAISVQLAQGSLSQTNGDLDVAIE 98
>gi|150019082|ref|YP_001311336.1| flagellar basal body rod protein FlgC [Clostridium beijerinckii
NCIMB 8052]
gi|149905547|gb|ABR36380.1| flagellar basal-body rod protein FlgC [Clostridium beijerinckii
NCIMB 8052]
Length = 135
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M T QI++ + R ++ N+ANAST + ++ F+ L+ N M
Sbjct: 1 MNAFTSMQISATGLSAERLRMDTITSNMANASTTRSANGKGPYVRKVAVFQEALDANKDM 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A ++ S + V + NE+ YE N
Sbjct: 61 AGVKAVKIENDPSPLRKVYDPTHPDADSNGYVTMPN---VNVLNEMADMMVATRSYEANV 117
Query: 115 KLIKKLNSMVMHVV 128
L SM +
Sbjct: 118 DTFNALKSMFSKAL 131
>gi|237751239|ref|ZP_04581719.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
43879]
gi|229372605|gb|EEO22996.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
43879]
Length = 163
Score = 40.3 bits (93), Expect = 0.087, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 31/157 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMART 57
++ F I+ + R ++S NIANA+T YR +++ N+
Sbjct: 3 MSTFDISGYGLSAQRVRVNVISANIANANTTRTDEGGPYRRQEVVFRAFDFNKQLNKRLA 62
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQ-----------------VSGN-------- 92
+ +L E P + + N
Sbjct: 63 KDNNLVEYKDPLEEGAYGKKPVPPITSVYIDKIVRDDNKPLMKYDPTHPDANAQGYVAYP 122
Query: 93 TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V E+ Y+ N + +M + +
Sbjct: 123 NVNPVVEMADLVEATRAYQANVAAFQSAKNMASNAIT 159
>gi|254853085|ref|ZP_05242433.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
R2-503]
gi|255521221|ref|ZP_05388458.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
J1-175]
gi|300764524|ref|ZP_07074517.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
N1-017]
gi|258606433|gb|EEW19041.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
R2-503]
gi|300514878|gb|EFK41932.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
N1-017]
Length = 136
Score = 40.3 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETAL-------- 57
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--TVGITNELYKSGHIKYLYELNT 114
T +K S+ S N + P N V +T E+ + +Y NT
Sbjct: 58 TGTKGVKVSEISSDTGNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANT 117
Query: 115 KLIKKLNSMV 124
++ M+
Sbjct: 118 SALQANEKMM 127
>gi|261409668|ref|YP_003245909.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
gi|261286131|gb|ACX68102.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
Length = 275
Score = 40.3 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A N L +R ++++N+AN +T Y+ K+ +SFE +L Q + H K+ D +G
Sbjct: 8 AMVSMNALQQRLDVIADNMANVNTAGYKKKE-ASFEDVLTQV-------QGHHKDFDRTG 59
Query: 70 LHWN 73
Sbjct: 60 RATP 63
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 75 HVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
AP + +SG + V +T+EL K ++ Y+L + + ++M+
Sbjct: 214 TTPPAPGEPPKSKVLSGFVEQSNVNLTDELTKMMEVQRAYQLTARALSSSDTMM 267
>gi|149201611|ref|ZP_01878585.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
gi|149144659|gb|EDM32688.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
Length = 262
Score = 40.3 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+A N R +++S N+AN +T ++ +D ++FET+L Q A +
Sbjct: 4 NVMHVAKTGLNAQQARIQVISNNLANVNTTGFK-RDRANFETLLYQTLRPAGAQTS 58
>gi|77463650|ref|YP_353154.1| flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
gi|126462482|ref|YP_001043596.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17029]
gi|221639493|ref|YP_002525755.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
KD131]
gi|332558506|ref|ZP_08412828.1| FlgG [Rhodobacter sphaeroides WS8N]
gi|11095160|gb|AAG29749.1|AF205139_1 flagellar distal rod protein [Rhodobacter sphaeroides]
gi|77388068|gb|ABA79253.1| Flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
gi|126104146|gb|ABN76824.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17029]
gi|221160274|gb|ACM01254.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
KD131]
gi|332276218|gb|EGJ21533.1| FlgG [Rhodobacter sphaeroides WS8N]
Length = 262
Score = 40.3 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+AS N R +++S N+AN +T ++ +D ++FE++L Q + + S
Sbjct: 8 VASTGLNAQQTRMQVISNNLANVNTTGFK-RDRANFESLLYQTWKPGGAQTSEATAMTSP 66
Query: 69 GLHWNAHVIEAPLDQTTGVQV 89
+ + T +
Sbjct: 67 SAVGTGVRVVSTEKLYTQGSL 87
>gi|328947992|ref|YP_004365329.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
2489]
gi|328448316|gb|AEB14032.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
2489]
Length = 153
Score = 40.3 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 20/148 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDIS------------ 42
M T IA+ + R ++S NIANA+T YR + +
Sbjct: 1 MGLFTSINIAATGMSVERLRTDVISNNIANATTTRTQEGGAYRKQSVIVEPIASSNPQWR 60
Query: 43 -SF-ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
F ++ L+ +K+S+ + ++ +A V V I NE+
Sbjct: 61 FPFVDSELDNGPGKGVRVREIIKDSEQGRMVYDPSHPDAIQSGPNKGYVEYPNVNIVNEM 120
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I+ M +
Sbjct: 121 VNMISANRAYEANSSVIQGSKEMFASAL 148
>gi|332140552|ref|YP_004426290.1| flagellar hook-associated protein FlgK [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550574|gb|AEA97292.1| flagellar hook-associated protein FlgK [Alteromonas macleodii
str. 'Deep ecotype']
Length = 680
Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNY 36
M + F +A+ N S+ + S NIAN +TP Y
Sbjct: 1 MSSVDLFSLATSGVNASSKLLQTTSNNIANVNTPGY 36
>gi|329928721|ref|ZP_08282570.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
HGF5]
gi|328937502|gb|EGG33920.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
HGF5]
Length = 275
Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A N L +R ++++N+AN +T Y+ K+ +SFE +L Q + H K+ D +G
Sbjct: 8 AMVSMNALQQRLDVIADNMANVNTAGYKKKE-ASFEDVLTQV-------QGHHKDFDRTG 59
Query: 70 LHWN 73
Sbjct: 60 RATP 63
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 75 HVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
AP + +SG + V +T+EL K ++ Y+L + + ++M+
Sbjct: 214 TTPPAPGEPPKSKVLSGFVEQSNVNLTDELTKMMEVQRAYQLTARALSSSDTMM 267
>gi|325111114|ref|YP_004272182.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
5305]
gi|324971382|gb|ADY62160.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
5305]
Length = 256
Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFE 45
A+ S RQ ++S NIANA+T +++ +D++ F
Sbjct: 12 ADLQSLRQDVISNNIANANTSSFK-RDLAIFA 42
>gi|303248256|ref|ZP_07334519.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
fructosovorans JJ]
gi|302490394|gb|EFL50305.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
fructosovorans JJ]
Length = 128
Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 8/117 (6%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A +S + + N+AN +T Y+++D L+ T + + E S+G
Sbjct: 8 AQSALGAMSTSMAVTANNVANVNTDGYKSQD-----ARLSTGPDGQGTQVSSIVEDTSAG 62
Query: 70 LHWNAHVIEAPLDQTTGVQVS---GNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
V Q+ + V + + +E N +I+ + M
Sbjct: 63 ALRAETVAAENQAGAYEPQMDMVEMSNVDLVRQNVNMIQDSRAFEANVAVIRTADEM 119
>gi|157147100|ref|YP_001454419.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
BAA-895]
gi|157084305|gb|ABV13983.1| hypothetical protein CKO_02877 [Citrobacter koseri ATCC BAA-895]
Length = 261
Score = 40.3 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG E L Q + G+ V + E+ ++ YE+N K++ +
Sbjct: 192 YRETAASGEAVEGVPGEDALGQLEQGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVTQ 259
>gi|289578425|ref|YP_003477052.1| fagellar hook-basal body protein [Thermoanaerobacter italicus
Ab9]
gi|289528138|gb|ADD02490.1| fagellar hook-basal body protein [Thermoanaerobacter italicus
Ab9]
Length = 413
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKAHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|229917023|ref|YP_002885669.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
gi|229468452|gb|ACQ70224.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
Length = 257
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMARTHETHLKESD 66
A+ N L +Q+I+S N+ N TP ++A D + SF +L ++ +K
Sbjct: 7 TAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKSRVKGEV 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ P + SG+ +
Sbjct: 67 GTLSMGVYLQETMPRFSAGSITESGSPTDL 96
>gi|301168115|emb|CBW27701.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
Length = 146
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M +T +I+S +R +S NIANA T YR K++ +F
Sbjct: 1 MDLLTSLKISSSGLAANKKRMASISSNIANAQTTRTAEGGPYRRKEVVFGSEPARETFSE 60
Query: 47 ILNQNFL--MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
IL T + ++ + DQ N + E+
Sbjct: 61 ILEGELGEKAQTVQATEVISTNRPPILKYEPNHPDANDQGYVAYPDINVM---EEMANMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + +M M +
Sbjct: 118 SASRAYEANINAMNTTKNMAMKAL 141
>gi|254993619|ref|ZP_05275809.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
J2-064]
Length = 136
Score = 40.3 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L +
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKV 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + SD+ + ++ V + V +T E+ + +Y NT
Sbjct: 66 SEIS----SDTGSVKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVXQKMYAANTSA 119
Query: 117 IKKLNSMV 124
++ M+
Sbjct: 120 LQANEKMM 127
>gi|325289233|ref|YP_004265414.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
8271]
gi|324964634|gb|ADY55413.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
8271]
Length = 447
Score = 40.3 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A ++ ++ NIAN +T Y+A ++ F IL+Q A ++ S+
Sbjct: 8 AVSGLQAHQKKMDVIGNNIANVNTVAYKASRVT-FSDILSQTLSSATGADSTSGRGGSNA 66
Query: 70 LHWNAHVIEAPLDQ--TTGVQVS-GNTVGI 96
V +D T G S GN+ +
Sbjct: 67 KQIGLGVGIGSIDTLMTAGSTESTGNSTDL 96
>gi|304438499|ref|ZP_07398439.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304368582|gb|EFM22267.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 711
Score = 40.3 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 11/86 (12%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS--GLHWNA 74
R +V NIAN +T Y+A ++ F L Q A +L + GL N
Sbjct: 15 HQTRMDVVGHNIANVNTVGYKASRVT-FADTLYQTSSGASAPTGNLGGINPKQIGLGMNV 73
Query: 75 HVIEAPLDQ--------TTGVQVSGN 92
I+ T V +SGN
Sbjct: 74 ASIDTIFGDASAQGTGKNTDVALSGN 99
>gi|261838846|gb|ACX98612.1| flagellar basal-body rod protein [Helicobacter pylori 51]
Length = 161
Score = 40.3 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 ---MARTHETHLKESDSSGLHWNAHVI--------EAPLDQTTGVQVSGN--------TV 94
+E L E D + L V+ PL + N V
Sbjct: 63 QNHQITPYENPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|94986792|ref|YP_594725.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
gi|94731041|emb|CAJ54404.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
Length = 502
Score = 40.3 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
VS NIANA+T Y+ + + F+ + +Q+ + T ++ + I
Sbjct: 21 TVSNNIANANTIGYKQQQVV-FQDLFSQDLAIGSTGSQGPNQAGMGAQVGSVRTIF---- 75
Query: 83 QTTGVQVSGNTV 94
T G GN+V
Sbjct: 76 -TQGAFEPGNSV 86
>gi|255523706|ref|ZP_05390672.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
P7]
gi|296186710|ref|ZP_06855112.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
P7]
gi|255512575|gb|EET88849.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
P7]
gi|296048747|gb|EFG88179.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
P7]
Length = 144
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 13/134 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFE----TILNQNFLMAR 56
+I++ + R ++ NIAN T YR + I+ F+ T LN+
Sbjct: 8 LRISASGLSAERLRMDTIASNIANVDTTRGANGQPYR-RKIAVFQENLNTQLNKQNGKYE 66
Query: 57 THETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+K + P D VS V + NE+ YE N
Sbjct: 67 QTPLGVKAVGIVDDESPLRRVYDPSNPDADAQGYVSKPNVNVLNEMADMMVATRAYEANI 126
Query: 115 KLIKKLNSMVMHVV 128
I +M +
Sbjct: 127 DAISSEKTMFSKAL 140
>gi|51246533|ref|YP_066417.1| flagellar hook basal body protein (FlgG) [Desulfotalea psychrophila
LSv54]
gi|50877570|emb|CAG37410.1| probable flagellar hook basal body protein (FlgG) [Desulfotalea
psychrophila LSv54]
Length = 261
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+A + +E+ +SG E + G+ V + E+ +
Sbjct: 178 FTNPAGLAAIGKNLFEETGASGTATIGIPGEEGYGTLIQQYLEGSNVNLVAEMAAMISTQ 237
Query: 108 YLYELNTKLIKKLNSMVMHV 127
YE+N+ ++K + M+ V
Sbjct: 238 RAYEINSSMVKTSDQMMQTV 257
>gi|23100412|ref|NP_693879.1| flagellar basal-body rod protein [Oceanobacillus iheyensis
HTE831]
gi|22778645|dbj|BAC14913.1| flagellar basal-body rod protein [Oceanobacillus iheyensis
HTE831]
Length = 269
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTHETHLKESD 66
A+ +Q+ +S NIANA+TP Y+A I +F +L + +T + +
Sbjct: 7 TAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELL-----LQQTGSSSQIPTS 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQ 88
G+++ P++ VQ
Sbjct: 62 QGGMNFPISQTIGPINTGVYVQ 83
>gi|261840251|gb|ACY00017.1| flagellar basal body rod protein FlgC [Helicobacter pylori 52]
gi|332674370|gb|AEE71187.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 83]
Length = 161
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNHQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|238916744|ref|YP_002930261.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
27750]
gi|238872104|gb|ACR71814.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
27750]
Length = 164
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 35/156 (22%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHET 60
F +++ R ++SENIANA T Y K + E + L + +
Sbjct: 5 FNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKSAYGS 64
Query: 61 H-----------LKESDSSGLHWNAHVIEAPLDQTTGVQV---------SGN------TV 94
+ L+ ++ + V D +T +++ N V
Sbjct: 65 YGTGAYSTFSDALRLANGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVTYPNV 124
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
E+ YE N SM +G
Sbjct: 125 NTVQEMTDLIDASRSYEANISAFNASKSM---ATKG 157
>gi|187918167|ref|YP_001883730.1| flagellar basal body rod protein FlgC [Borrelia hermsii DAH]
gi|119861015|gb|AAX16810.1| flagellar basal-body rod protein FlgC [Borrelia hermsii DAH]
Length = 152
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 42/148 (28%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M + AS R +++ NIAN T +YR + + F + +
Sbjct: 1 MGLFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVI-FAPRVVSPYWK 59
Query: 55 ARTHETHLKESDSSG-LHWNAHVIEAPLDQTTGVQV-----SGN--------TVGITNEL 100
L G + ++PL SG V E+
Sbjct: 60 GPFVPDDLDNGVGQGVRVASIEKDKSPLKLKYDPTHPDAIRSGELKGYVEFPNVNAVEEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I SM +
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSAL 147
>gi|254438373|ref|ZP_05051867.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
307]
gi|198253819|gb|EDY78133.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
307]
Length = 138
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 21/137 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST-------------PNYRAKDISSFETILNQN 51
F IA + R V+ NIANA+ P ++ +FE L
Sbjct: 6 NVFDIAGRSMAAQMVRLNTVASNIANANARAGSAEETFRPLRPVFK----VAFEDGLRDA 61
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ A + V V + E+ ++
Sbjct: 62 ERSTVDVVDIVSLDRLPLRVLEPGHPLADEEGFVYVAP----VDVNEEMVDMLEASRQFQ 117
Query: 112 LNTKLIKKLNSMVMHVV 128
N +++ + ++++ V
Sbjct: 118 NNLEVVTTMRTLMLRTV 134
>gi|20807880|ref|NP_623051.1| flagellar basal body and hook proteins [Thermoanaerobacter
tengcongensis MB4]
gi|254478868|ref|ZP_05092232.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum
DSM 12653]
gi|20516445|gb|AAM24655.1| Flagellar basal body and hook proteins [Thermoanaerobacter
tengcongensis MB4]
gi|214035181|gb|EEB75891.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum
DSM 12653]
Length = 415
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AISGLQAHQARLDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGN 99
>gi|146277706|ref|YP_001167865.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17025]
gi|145555947|gb|ABP70560.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17025]
Length = 262
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+A N R +++S N+AN +T ++ +D ++FE++L Q + + S
Sbjct: 8 VAKTGLNAQQTRMQVISNNLANVNTTGFK-RDRANFESLLYQTWKPGGAQTSEATAMTSP 66
Query: 69 GLHWNAHVIEAPLDQTTGVQV 89
+ + T +
Sbjct: 67 SAVGTGVRVVSTEKLYTQGSL 87
>gi|255022068|ref|ZP_05294074.1| hypothetical protein ACA_0862 [Acidithiobacillus caldus ATCC 51756]
gi|254968554|gb|EET26110.1| hypothetical protein ACA_0862 [Acidithiobacillus caldus ATCC 51756]
Length = 120
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 14/119 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
+ + + ++S ++ANASTP Y+A ++ F L L
Sbjct: 10 LGKALALRNAQLDVLSSDLANASTPGYKATNL-DFARALRSALAAPGDQLGDLS------ 62
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
++ V + GN+V + + E + ++ +
Sbjct: 63 -------RYVRYERGNPVGLDGNSVSPQRVMMQITQTALDSEADETFGANAIQGMIDAI 114
>gi|326791535|ref|YP_004309356.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
5427]
gi|326542299|gb|ADZ84158.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
5427]
Length = 432
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+++ ++ F + +Q A +
Sbjct: 8 AVSGLRVHQTRMDVIGNNIANVNTIGYKSQRVT-FNDVFSQTLSSASAASDETGRGGRNP 66
Query: 70 LHWNAHVIEAPLD 82
+ V + +D
Sbjct: 67 MQVGLGVNVSSID 79
>gi|262273527|ref|ZP_06051341.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
101886]
gi|262222505|gb|EEY73816.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
101886]
Length = 243
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG E L + + G+ V + E+ + YE+N K++ +
Sbjct: 174 FRETGASGAPIEGVPGEEGLGYLSQYALEGSNVSVVEEMVNMITTQRAYEMNAKVVSSAD 233
Query: 122 SMVM 125
M+
Sbjct: 234 QMLK 237
>gi|83814873|ref|YP_446719.1| flagella basal body rod protein [Salinibacter ruber DSM 13855]
gi|83756267|gb|ABC44380.1| Flagella basal body rod protein [Salinibacter ruber DSM 13855]
Length = 137
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 20/123 (16%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
++ + ++R++ S N+AN TP Y + SFE L R H L+ +
Sbjct: 32 RLLRNAMSAYAQRRRAASSNLANIDTPGYDRMSV-SFEEELQD----VRRHSGSLR--EQ 84
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S + + V + + EL + + ++ + + ++
Sbjct: 85 SEVEPDTEVEDEAP-------------VLEEELMTLTDTQMRTRMASRALTEHFDLMKIG 131
Query: 128 VRG 130
+ G
Sbjct: 132 ITG 134
>gi|320529447|ref|ZP_08030535.1| putative flagellar hook protein FlgE [Selenomonas artemidis
F0399]
gi|320138413|gb|EFW30307.1| putative flagellar hook protein FlgE [Selenomonas artemidis
F0399]
Length = 681
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R ++ NIAN +T ++A ++ F +++QN A + + + + V
Sbjct: 15 HQTRMDVIGNNIANVNTTGFKASRVT-FADMISQNLSGASAPQGTIGGVNPKQIGLGMSV 73
Query: 77 IEAPLDQTTGVQVS 90
L T G S
Sbjct: 74 ASTDLLYTNGSVQS 87
>gi|119384847|ref|YP_915903.1| flagellar basal body rod protein FlgG [Paracoccus denitrificans
PD1222]
gi|119374614|gb|ABL70207.1| flagellar basal-body rod protein FlgG [Paracoccus denitrificans
PD1222]
Length = 261
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHET 60
+ QIA+ + R ++S N+AN ST Y A+ + Q + T+
Sbjct: 1 MRALQIAASGMSAQQMRVDVISNNLANMSTTGYNARRAEFADLQYQQATRPGTLTATNGA 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ GL + L Q T VQ +G
Sbjct: 61 MVPAGVQLGLGVRPASVTVMLAQGTPVQTNG 91
>gi|146281769|ref|YP_001171922.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri A1501]
gi|145569974|gb|ABP79080.1| flagellar basal-body rod protein FlgC [Pseudomonas stutzeri A1501]
Length = 134
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 19/133 (14%)
Query: 14 ANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM-----------AR 56
+ S R +S NIANA T + YRA+ F T+ Q A
Sbjct: 1 MSAQSTRLNTISSNIANAETVSSSVDQTYRARH-PVFATVFQQAGGQPNESLFAGQDQAG 59
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
L + G + P +G N V + E+ ++ N +L
Sbjct: 60 AGVQVLGVVEDQGELQARYEPNHPAADESGYVYYPN-VNVVEEMADMISASRAFQTNAEL 118
Query: 117 IKKLNSMVMHVVR 129
+ +M+ V+
Sbjct: 119 MNTAKTMLQKVLT 131
>gi|121533754|ref|ZP_01665581.1| protein of unknown function DUF1078 domain protein [Thermosinus
carboxydivorans Nor1]
gi|121307745|gb|EAX48660.1| protein of unknown function DUF1078 domain protein [Thermosinus
carboxydivorans Nor1]
Length = 420
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
R ++ NIAN +T ++A + +F+ IL+Q A + + ++
Sbjct: 10 SGLRNHQTRMDVIGNNIANVNTIGFKASRV-NFQDILSQTMQGASSGIGNQGGTN 63
>gi|315179396|gb|ADT86310.1| flagellar basal-body rod protein B [Vibrio furnissii NCTC 11218]
Length = 58
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
P TG GNTV + E + ++ + + + ++G
Sbjct: 7 YRVPTQPDTG---DGNTVDVDLERNLFMQNQLRHQASLDFLGSKFKNLTKAIKG 57
>gi|291277450|ref|YP_003517222.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
gi|290964644|emb|CBG40498.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
Length = 164
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 31/160 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQ 50
M ++ F I+ + R I+S NIANA+T YR +++ F ILN+
Sbjct: 1 MAFLSSFDISGYGLSAQRFRTNIISSNIANANTTRTDEGGPYRRQEVVFKAFDFNKILNE 60
Query: 51 NFLMARTHETH---LKESDSSGLHWNAHVI----------EAPLDQTTGVQVSGN----- 92
+ + L E + L A + PL + N
Sbjct: 61 KIAKENENLAYEDPLDEKEFGKLPKPAIMSVYVDKVVRDDREPLMKYDPSHPDANADGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V E+ Y+ N + +M + +
Sbjct: 121 AYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMANNAIT 160
>gi|226939376|ref|YP_002794449.1| FlgC1 [Laribacter hongkongensis HLHK9]
gi|226714302|gb|ACO73440.1| FlgC1 [Laribacter hongkongensis HLHK9]
Length = 137
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M IA S+R +V+ NIAN + Y+A+ I ++
Sbjct: 1 MSLNRVLDIAGSALTAQSKRLNVVASNIANVDSAVASNGEPYKARRIVFTPIPVSPAEPK 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYKSGHIKYLYELN 113
D S N + D V + N V E+ Y+ N
Sbjct: 61 VAKVAVTAIVEDQSPPRMNYNPAHPLADANGYVTMPNINPV---EEMTDMISASRAYQTN 117
Query: 114 TKLIKKLNSMVMHVV 128
+++ ++ +
Sbjct: 118 VEMMNTTKQLLQKTL 132
>gi|187924404|ref|YP_001896046.1| flagellar basal body FlaE domain protein [Burkholderia
phytofirmans PsJN]
gi|187715598|gb|ACD16822.1| flagellar basal body FlaE domain protein [Burkholderia
phytofirmans PsJN]
Length = 410
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+Q + S ++ NIANA+T +++ + F + + A ++ +
Sbjct: 3 YQTGLSGLSAASTDLDVIGNNIANANTVGFKSST-AQFADMYANAVMTAANNQVGIGTRL 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S+ ++ + D+ + ++GN
Sbjct: 62 STAEQDFSNGTFSKTDRPLDIAINGN 87
>gi|325295411|ref|YP_004281925.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065859|gb|ADY73866.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 135
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 7/115 (6%)
Query: 19 ERQKIVSENIANASTPN-----YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R I S N+ANA++ + YR + I FE++L + K + +
Sbjct: 18 VRIDIHSSNLANANSVDENGNPYR-RKIPIFESVLEKTAKGEIYRVKVKKIVEDPSPYKL 76
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ PL G N V E+ YE N M+++ +
Sbjct: 77 KYDPSNPLADKNGYVKLPN-VDPIREMVDMISAMRTYEANLTAFNTHKGMLLNAI 130
>gi|257457889|ref|ZP_05623048.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
35580]
gi|257444602|gb|EEV19686.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
35580]
Length = 151
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 45/149 (30%), Gaps = 23/149 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP-----NYRAKDISSFETILNQ----- 50
M + IA+ + R ++S+NIANAST Y + +
Sbjct: 1 MGIFSSINIAATGMSAERLRTDVISDNIANASTTSSQEGGYFRRSRVILAQKNDGIDWRL 60
Query: 51 ---NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG--------NTVGITNE 99
M R T ++ + + + P V SG V I E
Sbjct: 61 PFVPSDMDRGVGTGVRVTGIEKDNSEPRLSYEPDHPHAIV--SGPKAGYVEYPNVNIVTE 118
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ YE N +++ M +
Sbjct: 119 MVDLISASRSYEANAAVVQGSKEMFQRAL 147
>gi|187778756|ref|ZP_02995229.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
15579]
gi|187772381|gb|EDU36183.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
15579]
Length = 350
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 32 QTRLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 90
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 91 GIFTKFTTGNMQTTGRNLDM 110
>gi|118589983|ref|ZP_01547387.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
gi|118437480|gb|EAV44117.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
Length = 138
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 10/131 (7%)
Query: 2 QPIT-FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
P++ QI+ SER ++VSEN+ANA + A D + +R +
Sbjct: 3 DPLSATLQISGAGLRAQSERLRVVSENLANARSTGEAAGDDPYRRKTITFESEFSRAVQA 62
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYLYELNT 114
+L G +E N V EL YE N
Sbjct: 63 NLVSVKGIGEDKAEFAVE---YDPGHPAADENGYVKMPNVNTLLELADMRETNRSYEANL 119
Query: 115 KLIKKLNSMVM 125
K++ + MVM
Sbjct: 120 KVMTQAREMVM 130
>gi|313896037|ref|ZP_07829591.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
137 str. F0430]
gi|312975462|gb|EFR40923.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
137 str. F0430]
Length = 676
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R ++ NIAN +T ++A ++ F +++QN A + + + + V
Sbjct: 15 HQTRMDVIGNNIANVNTTGFKASRVT-FADMISQNLSGASAPQGTIGGVNPKQIGLGMAV 73
Query: 77 IEAPLDQTTGVQVS 90
L T G S
Sbjct: 74 ASTDLLYTNGSVQS 87
>gi|311068140|ref|YP_003973063.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
gi|310868657|gb|ADP32132.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
Length = 149
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 21/147 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS----SFETILNQNFLMAR 56
M ++ R +VS N+AN T RAK + + L
Sbjct: 1 MTAFQSLNVSGSALTAQRVRMDVVSSNLANMDTT--RAKQVDGEWVPYRRKLVSLQSNGE 58
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTG-------VQVSGN--------TVGITNELY 101
+ + L SSG N + + + N V E+
Sbjct: 59 SFSSILHSRMSSGDAGNGVKVTKVTEDDSDFNLVYDPTNPDANEEGYVQKPNVDPLKEMV 118
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M++ +
Sbjct: 119 DLVSSTRSYEANVTAMNASKGMLLKAL 145
>gi|308064340|gb|ADO06227.1| flagellar basal body rod protein FlgC [Helicobacter pylori Sat464]
Length = 161
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNNQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|108563932|ref|YP_628248.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPAG1]
gi|188528350|ref|YP_001911037.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
gi|217033829|ref|ZP_03439254.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
gi|107837705|gb|ABF85574.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
gi|188144590|gb|ACD49007.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
gi|216943727|gb|EEC23170.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
gi|308062841|gb|ADO04729.1| flagellar basal body rod protein FlgC [Helicobacter pylori Cuz20]
gi|315585965|gb|ADU40346.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 35A]
gi|317013372|gb|ADU83980.1| flagellar basal body rod protein FlgC [Helicobacter pylori
Lithuania75]
gi|317179760|dbj|BAJ57548.1| flagellar basal body rod protein FlgC [Helicobacter pylori F30]
gi|317181261|dbj|BAJ59047.1| flagellar basal body rod protein FlgC [Helicobacter pylori F32]
Length = 161
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNHQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|114330359|ref|YP_746581.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
gi|114307373|gb|ABI58616.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
Length = 134
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 10/117 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M + F +A S+R +V+ N+ANA + YR++ + F T+
Sbjct: 1 MSLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVV-FRTVDISADKA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
+ S ++ + N V E+ Y+
Sbjct: 60 KGVKVAGIVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVD---EMVNMMSASRSYQ 113
>gi|291276999|ref|YP_003516771.1| flagellar hook protein FlgE [Helicobacter mustelae 12198]
gi|290964193|emb|CBG40039.1| Putative flagellar hook protein, FlgE [Helicobacter mustelae 12198]
Length = 600
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 25/86 (29%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S NIAN +TP YR I F+T+L++N + + D
Sbjct: 22 ISNNIANVNTPGYREH-IPEFKTLLSRNIA-------------------SVNGSTVSSDS 61
Query: 84 TTGVQVSGNTVGITNELYKSGHIKYL 109
GV VS N + KSG K
Sbjct: 62 NYGVSVSSNAIS-----TKSGDYKRS 82
>gi|187478183|ref|YP_786207.1| flagellar basal body rod protein FlgC [Bordetella avium 197N]
gi|115422769|emb|CAJ49297.1| flagellar basal-body rod protein [Bordetella avium 197N]
Length = 139
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 16/140 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M ++ F+I+ S+R + + N+ANA + P+ YRA+ + + N +
Sbjct: 1 MSLLSIFEISGSALAAQSQRLNVAASNLANADSVAGPDGQPYRARQV-----VFQMNPAL 55
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGITNELYKSGHIKYL 109
+ + + + +A ++ D + + V E
Sbjct: 56 GQAAGQEIGGVKVAAVVEDASPLKMVFDPKNPMADAQGYVAMPNVDPVAETVNMIAASRS 115
Query: 110 YELNTKLIKKLNSMVMHVVR 129
Y+ N +++ ++ +
Sbjct: 116 YQANIEVLNTAKQLMQRTLT 135
>gi|11386807|sp|P57422|FLGE_BUCAI RecName: Full=Flagellar hook protein flgE
gi|25403598|pir||E84969 flagellar hook protein flgE [imported] - Buchnera sp. (strain
APS)
gi|10039011|dbj|BAB13045.1| flagellar hook protein flgE [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 405
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
+I+S NIANAST Y+++ F+ + + +F T+ + S N ++E
Sbjct: 14 MEIISNNIANASTIGYKSRKPLFFD-MFSHSFYSNTTNGYGVGISSIIQNFNNGMLVETG 72
Query: 81 LDQTTGVQVSG 91
D G+ G
Sbjct: 73 RDLDLGIIKDG 83
>gi|320529456|ref|ZP_08030543.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
gi|320138293|gb|EFW30188.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
Length = 661
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
++ NIAN +T ++A ++ F +++QN A + T + ++ + V
Sbjct: 1 MDVIGNNIANVNTTGFKASRVT-FADMISQNLSGASSPGTTVGGTNPKQIGLGTSVSSVD 59
Query: 81 LDQTTGVQVS 90
L GV S
Sbjct: 60 LLFNDGVAQS 69
>gi|297380732|gb|ADI35619.1| flagellar basal-body rod protein FlgC [Helicobacter pylori v225d]
Length = 161
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNHQITPYEDPLDEGDNNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|299531286|ref|ZP_07044696.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
gi|298720693|gb|EFI61640.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
Length = 422
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ NIAN++T ++A + F ++ A + + +
Sbjct: 3 FQQGLSGLNAASKNLDVIGHNIANSNTTGFKASR-ADFAEMVASAIGSASGQSSGIGVNV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+S + ++GN
Sbjct: 62 ASVSQQFRQGSITSTGNNLDIAINGN 87
>gi|313634361|gb|EFS00958.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
N1-067]
Length = 138
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 19/130 (14%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +IS FET L
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVMSEISPFETAL------TG 59
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--TVGITNELYKSGHIKYLYELNT 114
T + E S N + P N V +T E+ + +Y NT
Sbjct: 60 TKGVKVSEISSDTGSVNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANT 119
Query: 115 KLIKKLNSMV 124
++ M+
Sbjct: 120 SALQANEKMM 129
>gi|297544701|ref|YP_003677003.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842476|gb|ADH60992.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 413
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y+A ++ F+ I +Q A + + ++
Sbjct: 8 AVSGLKSHQARMDVIGNNIANVNTVGYKASRMT-FKEIFSQTIKGASAPQGNGGGTNPQQ 66
Query: 70 LHWNAHVIE----------APLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 IGLGVAIASIDTLFTSGGAQRTDNPTDLSIDGN 99
>gi|269792948|ref|YP_003317852.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100583|gb|ACZ19570.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 139
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 37/135 (27%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP-----NYRAKDISSFETILNQNFLMA 55
M+ +A +S N+AN +T + + F+ L
Sbjct: 1 MKVFRSVDVAGSALTAHRVWMDAISSNLANVNTTRTPEGGPYVRRVPIFQERLMAAMKDG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
T + V + P G N V + E+ YE N
Sbjct: 61 STSSGVKVVAIERDPLPPRMVYQPDHPDANQEGYVAYPN-VNVVREMADMMVASRAYEAN 119
Query: 114 TKLIKKLNSMVMHVV 128
+++ +M +
Sbjct: 120 LTVVETGKAMWNSAI 134
>gi|227873538|ref|ZP_03991783.1| flagellar basal body rod protein [Oribacterium sinus F0268]
gi|227840628|gb|EEJ51013.1| flagellar basal body rod protein [Oribacterium sinus F0268]
Length = 136
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 37/127 (29%), Gaps = 17/127 (13%)
Query: 19 ERQKIVSENIANAST------PNYRAKDI-------SSFETILNQNFLMARTHETH---- 61
R I +ENIAN T Y+ KD+ SF+ L H
Sbjct: 6 VRMDIAAENIANVDTTRTEAGSAYKRKDVVLESFGERSFQQALRNAQNGKGFRGQHAGVR 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ + D V+ V I E S YE N + +
Sbjct: 66 VQGVITDDREMKRVYNPNHPDADAQGYVNYPNVDILKETVDSMSATRSYEANVTALNAMK 125
Query: 122 SMVMHVV 128
+M +
Sbjct: 126 TMAQRAL 132
>gi|150390489|ref|YP_001320538.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
QYMF]
gi|149950351|gb|ABR48879.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
QYMF]
Length = 147
Score = 39.5 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 38/124 (30%), Gaps = 15/124 (12%)
Query: 20 RQKIVSENIANAST---PN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R +S+NIANA+T PN Y+ + + + F + E
Sbjct: 20 RMDTISKNIANANTTRTPNGSPYKRQVVLFQSKEDAKGFSSQLERIMNNNEKPGGVEVVG 79
Query: 74 AHVIEAPLDQTTGV-QVSGN--------TVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+P Q N V I E+ YE NT + SM
Sbjct: 80 VKNDSSPYRQVYDPGHPDANEEGYVLMPNVDIVVEMANMISATRAYEANTTALNATKSMA 139
Query: 125 MHVV 128
M +
Sbjct: 140 MKAL 143
>gi|15612531|ref|NP_224184.1| flagellar basal body rod protein FlgC [Helicobacter pylori J99]
gi|4156087|gb|AAD07040.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
Length = 161
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKIA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TV 94
+ + L S + A PL + N V
Sbjct: 63 QNNQIIPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|109948140|ref|YP_665368.1| flagellar basal body rod protein FlgC [Helicobacter acinonychis
str. Sheeba]
gi|109715361|emb|CAK00369.1| flagellar basal-body rod protein [Helicobacter acinonychis str.
Sheeba]
Length = 161
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F +LNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEVLNQKIA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TV 94
+ + L S + PL + N V
Sbjct: 63 QNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|264676570|ref|YP_003276476.1| FlgE [Comamonas testosteroni CNB-2]
gi|262207082|gb|ACY31180.1| FlgE [Comamonas testosteroni CNB-2]
Length = 422
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ NIAN++T ++A + F ++ A + + +
Sbjct: 3 FQQGLSGLNAASKNLDVIGHNIANSNTTGFKASR-ADFAEMVASAIGSASGQSSGIGVNV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+S + ++GN
Sbjct: 62 ASVSQQFRQGSITSTGNNLDIAINGN 87
>gi|210135737|ref|YP_002302176.1| flagellar basal body rod protein FlgC [Helicobacter pylori P12]
gi|210133705|gb|ACJ08696.1| flagellar basal-body rod protein FlgC [Helicobacter pylori P12]
Length = 161
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|28952050|ref|NP_240159.2| flagellar hook protein FlgE [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681699|ref|YP_002468085.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471395|ref|ZP_05635394.1| flagellar hook protein FlgE [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219624542|gb|ACL30697.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086078|gb|ADP66160.1| flagellar hook protein FlgE [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086649|gb|ADP66730.1| flagellar hook protein FlgE [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087235|gb|ADP67315.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087754|gb|ADP67833.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 408
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
+I+S NIANAST Y+++ F+ + + +F T+ + S N ++E
Sbjct: 17 MEIISNNIANASTIGYKSRKPLFFD-MFSHSFYSNTTNGYGVGISSIIQNFNNGMLVETG 75
Query: 81 LDQTTGVQVSG 91
D G+ G
Sbjct: 76 RDLDLGIIKDG 86
>gi|260893877|ref|YP_003239974.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
gi|260866018|gb|ACX53124.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
Length = 137
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 8/134 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M I F+I+ R +V+ N+AN T YR + + F +L
Sbjct: 1 MAFIDPFRISGSGLTAERLRLDLVANNLANIDTTRTPAGGPYRRR-VPVFAQVLEARKEG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + D G N V + +E+ YE N
Sbjct: 60 MVGMGVRVVAIVEDQSPFKVVYDPNHPDAQNGYVRYPN-VNVADEVVDLIGAARAYEANA 118
Query: 115 KLIKKLNSMVMHVV 128
+++ M +
Sbjct: 119 TVLETAKEMARQAI 132
>gi|332297607|ref|YP_004439529.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
12168]
gi|332180710|gb|AEE16398.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
12168]
Length = 151
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 25/150 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDI------------S 42
M T IA+ + R ++S+NIANAST ++ K + +
Sbjct: 1 MGLFTSINIAATGMSVERLRTDVISDNIANASTTRTPEGGKFQRKSVVLTPIAENPTFRN 60
Query: 43 SFETILNQNFLMARTHETHLKESDSSGLH----WNAHVIEAPLDQTTGVQVSGNTVGITN 98
F N A + + + + G + I++ + + N V
Sbjct: 61 PFVPADIDNGPGAGVRISKIVKDTAQGRMVYDPSHPDAIQSGPNAGYVEYPNVNIVN--- 117
Query: 99 ELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N+ +I+ M +
Sbjct: 118 EMVDLISASRAYEANSSVIQGSKDMFSSAL 147
>gi|325982373|ref|YP_004294775.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
gi|325531892|gb|ADZ26613.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
Length = 133
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 10/131 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMARTH 58
F IAS + S+R +V+ N++NA + YR + + F T+ A
Sbjct: 4 NVFGIASSAMSAQSQRLNVVASNLSNADSVTSSTGEPYRGRQVV-FSTLRADANGAAGVK 62
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+ S + N V E+ Y+ + ++
Sbjct: 63 VAGVIHDPSPMRQVFEPNHPFANTSGYVTMPNVNVVD---EMVNMMSASRSYQNSVDMMN 119
Query: 119 KLNSMVMHVVR 129
S++ +
Sbjct: 120 TTKSLLQKTLT 130
>gi|85710166|ref|ZP_01041231.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
gi|85688876|gb|EAQ28880.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
Length = 263
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
P + +A R ++++ N+AN T ++ +D + F T+ Q +A T
Sbjct: 2 PTSALHVARTGLEAQDARMRVIANNLANIGTTGFK-RDRAEFATLAYQEMRVAGQQSTQQ 60
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS--GNTVGI 96
+ + ++ GN++ +
Sbjct: 61 TAFATGLNLGTGVQVTGTSRIEAQGTLNQTGNSLDL 96
>gi|317014993|gb|ADU82429.1| flagellar basal body rod protein FlgC [Helicobacter pylori
Gambia94/24]
Length = 161
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNNQITPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|77918798|ref|YP_356613.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
2380]
gi|77544881|gb|ABA88443.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
2380]
Length = 143
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 13/140 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M T Q+++ + R ++S N+AN T YR +D+ + +
Sbjct: 1 MDIFTAMQVSASALSAQRTRLNVISGNLANVGTTRTPEGGPYRKRDVVFQSSQNMFEDHL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV------GITNELYKSGHIKY 108
+ +T+++ + S + N+ Q N + + E+
Sbjct: 61 QQAMDTNVQGVEVSRIQPNSRDFRTVY-QPGHPDADENGMLTLPNINVMEEVVDMMTAMR 119
Query: 109 LYELNTKLIKKLNSMVMHVV 128
YE N IK M +
Sbjct: 120 SYEANISAIKSAQRMATKAL 139
>gi|219682254|ref|YP_002468638.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219621987|gb|ACL30143.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
Length = 408
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
+I+S NIANAST Y+++ F+ + + +F T+ + S N ++E
Sbjct: 17 MEIISNNIANASTIGYKSRKPLFFD-MFSHSFYSNTTNGYGVGISSIIQNFNNGMLVETG 75
Query: 81 LDQTTGVQVSG 91
D G+ G
Sbjct: 76 RDLDLGIIKDG 86
>gi|322379367|ref|ZP_08053738.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
gi|322380862|ref|ZP_08054952.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
gi|321146713|gb|EFX41523.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
gi|321148185|gb|EFX42714.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
Length = 165
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 31/156 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAK------------------ 39
++ F I+ + R ++S NIANA+T YR +
Sbjct: 5 LSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAVFKSFDFNKVLNEKLA 64
Query: 40 ---DISSFETILNQNFLMARTHET----HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
D+ +E L+++ + + + ++++ + D VS
Sbjct: 65 KNNDLMEYEDPLDESDEIEKPNPPIMGVYIEKIVRDDKAPLLKYDPSHPDADANGYVSYP 124
Query: 93 TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N + +M + +
Sbjct: 125 NVNPVVEMADLIEATRAYQANVAAFQSTKNMAANAI 160
>gi|257871297|ref|ZP_05650950.1| flagellar hook protein [Enterococcus gallinarum EG2]
gi|257805461|gb|EEV34283.1| flagellar hook protein [Enterococcus gallinarum EG2]
Length = 312
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
L + +VS NIAN +T +++ + F+ +++Q A L +++ +
Sbjct: 24 SGMKNLQTKMDVVSNNIANVNTVGFKSSRVL-FQDMMSQTMSNATAPGNGLGGINATQIG 82
Query: 72 WNAHVIEAPLDQTTGVQVS 90
T G S
Sbjct: 83 LGVQTGSIDTINTVGAPQS 101
>gi|42524765|ref|NP_970145.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
gi|39576975|emb|CAE78204.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
Length = 147
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 14/135 (10%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFETILNQNFL 53
+I+S R ++ NIAN +T YR KD+ +F I++
Sbjct: 9 RISSSGMAAQRMRMNTIASNIANINTTQTPEGGPYRRKDVVFEAMPDAKNFGEIISSTDP 68
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + S D V+ + + E+ YE N
Sbjct: 69 AGSFQRVQVTDVISDRKAPLLKYEPDHPDANADGYVAYPNINLMEEMTNMIQASRSYEAN 128
Query: 114 TKLIKKLNSMVMHVV 128
++ M + +
Sbjct: 129 VTAVQASKDMALSAL 143
>gi|330809234|ref|YP_004353696.1| flagellar basal-body rod protein flgB [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327377342|gb|AEA68692.1| Putative flagellar basal-body rod protein flgB [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 125
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 9/118 (7%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
+ R K+ + NIA A+ P +A ++ +E + +S S
Sbjct: 15 AMSLEQLRAKVAAHNIAMANVPGGKAMRLNGYEPM--AALRGLHNDPELFAQSLRSLQDS 72
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+T + + G E+ + Y+ + + +++ VRG
Sbjct: 73 ELTPYLQSYTPSTPLALDG-------EVAQMSAASGRYQALADGVSRQFALMQLAVRG 123
>gi|313624695|gb|EFR94652.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL J1-023]
Length = 136
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L +
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTXGVKV 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + SD+ + ++ V + V +T E+ + +Y NT
Sbjct: 66 SEIS----SDTGSVKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVGQKMYAANTSA 119
Query: 117 IKKLNSMV 124
++ M+
Sbjct: 120 LQANEKMM 127
>gi|294501850|ref|YP_003565550.1| flagellar hook-basal body complex protein FlhP [Bacillus
megaterium QM B1551]
gi|294351787|gb|ADE72116.1| flagellar hook-basal body complex protein FlhP [Bacillus
megaterium QM B1551]
Length = 273
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ L ++ ++ N++N +TP Y+A+D +SF +L Q T + + +
Sbjct: 7 TAANTMGQLQQQLDVIGHNLSNTNTPGYKARD-ASFNDMLYQQVNNQEDKGTEKRLTPAG 65
>gi|257866386|ref|ZP_05646039.1| flagellar hook protein [Enterococcus casseliflavus EC30]
gi|257873098|ref|ZP_05652751.1| flagellar hook protein [Enterococcus casseliflavus EC10]
gi|257875999|ref|ZP_05655652.1| flagellar hook protein [Enterococcus casseliflavus EC20]
gi|257800344|gb|EEV29372.1| flagellar hook protein [Enterococcus casseliflavus EC30]
gi|257807262|gb|EEV36084.1| flagellar hook protein [Enterococcus casseliflavus EC10]
gi|257810165|gb|EEV38985.1| flagellar hook protein [Enterococcus casseliflavus EC20]
Length = 312
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
L + +VS NIAN +T +++ + F+ +++Q A L +++ +
Sbjct: 24 SGMKNLQTKMDVVSNNIANVNTVGFKSSRVL-FQDMMSQTMSNATAPGNGLGGINATQIG 82
Query: 72 WNAHVIEAPLDQTTGVQVS 90
T G S
Sbjct: 83 LGVQTGSIDTINTVGAPQS 101
>gi|332994164|gb|AEF04219.1| flagellar basal-body rod protein FlgC [Alteromonas sp. SN2]
Length = 140
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 14/139 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFL- 53
M I+S + R + NIANA++ + YRA+ F L +
Sbjct: 1 MSLFNVMSISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARH-PVFAAELQRAMGD 59
Query: 54 ---MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ ESD+ A ++ + + V I E+ Y
Sbjct: 60 QSKGVGVEVKGIVESDAPLQVEYAPHNPMADEEGYIYKPN---VNIVEEMANMMSASKAY 116
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N ++ + V++
Sbjct: 117 ETNVQVADTTKRIFRRVLQ 135
>gi|239817164|ref|YP_002946074.1| flagellar basal body rod protein FlgF [Variovorax paradoxus S110]
gi|239803741|gb|ACS20808.1| flagellar basal-body rod protein FlgF [Variovorax paradoxus S110]
Length = 248
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
+A A E+Q V+ N+ANASTP +RA+ I+SF + + A T + +
Sbjct: 4 MLYVAMSGAKQAMEQQASVANNMANASTPGFRAQ-INSFRAVPVTDGAEATTRAYVVATT 62
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + + E + G
Sbjct: 63 PGADFS-HGPLTETGRALDVAIHGDG 87
>gi|208435438|ref|YP_002267104.1| flagellar basal-body rod protein [Helicobacter pylori G27]
gi|308183713|ref|YP_003927840.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
gi|208433367|gb|ACI28238.1| flagellar basal-body rod protein [Helicobacter pylori G27]
gi|308065898|gb|ADO07790.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
Length = 161
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|325567523|ref|ZP_08144190.1| flagellar hook-basal body protein [Enterococcus casseliflavus
ATCC 12755]
gi|325158956|gb|EGC71102.1| flagellar hook-basal body protein [Enterococcus casseliflavus
ATCC 12755]
Length = 298
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
L + +VS NIAN +T +++ + F+ +++Q A L +++ +
Sbjct: 10 SGMKNLQTKMDVVSNNIANVNTVGFKSSRVL-FQDMMSQTMSNATAPGNGLGGINATQIG 68
Query: 72 WNAHVIEAPLDQTTGVQVS 90
T G S
Sbjct: 69 LGVQTGSIDTINTVGAPQS 87
>gi|226950067|ref|YP_002805158.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
gi|226841875|gb|ACO84541.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
Length = 334
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTRLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 74
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 75 GIFTKFTTGNMQTTGRNLDM 94
>gi|169827118|ref|YP_001697276.1| flagellar basal body rod protein FlgC [Lysinibacillus sphaericus
C3-41]
gi|168991606|gb|ACA39146.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41]
Length = 153
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 24/149 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDISSFETILNQ 50
++ F + A+ L+ R ++S N+AN T YR K ++
Sbjct: 1 MSIFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTFTAQEGQF 60
Query: 51 NFLMARTHETHLKESDSSGLHWN--AHVIEAPLDQTTGVQV-SGN--------TVGITNE 99
+ M K +G+ + E P N V E
Sbjct: 61 SKFMNVALGKDAKSGVGNGVKVTRISEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKE 120
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ YE N + SM+ +
Sbjct: 121 MVDLMSATRSYEANVTVFNANKSMLTKAL 149
>gi|261341492|ref|ZP_05969350.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
ATCC 35316]
gi|288316288|gb|EFC55226.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
ATCC 35316]
Length = 261
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG E Q + G+ V + E+ ++ YE+N K++ +
Sbjct: 192 YRETAASGEAVEGVAGEEAFGQLEQGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVTQ 259
>gi|254419217|ref|ZP_05032941.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
gi|196185394|gb|EDX80370.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
Length = 128
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 13/122 (10%)
Query: 9 IASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHETH 61
+A+ R ++++ENIANA TP YR + I F+ +
Sbjct: 3 VAASALKAQQSRMRVIAENIANAQSTARTPGGEPYR-RQIPVFQA--REVDGATGVTLAE 59
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ A Q ++ + V E + YE N +I+
Sbjct: 60 VRPDQGEFKMDYDPSHPAANAQGYVMRPN---VDTLVEAMDMREAQRAYEANLNVIETAR 116
Query: 122 SM 123
SM
Sbjct: 117 SM 118
>gi|120613060|ref|YP_972738.1| Fis family transcriptional regulator [Acidovorax citrulli
AAC00-1]
gi|120591524|gb|ABM34964.1| transcriptional regulator, Fis family [Acidovorax citrulli
AAC00-1]
Length = 246
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A+ ++RQ +++ N+ANAST +RA ++S+F ++ + +SG
Sbjct: 12 ASAAAQRQAVLANNLANASTNGFRA-EMSTFRSV---PVQGDGSKTRVFALEATSG---- 63
Query: 74 AHVIEAPLDQTTGVQVSGNTV 94
HV Q TG + V
Sbjct: 64 -HVETPGPVQRTGRNLDAMAV 83
>gi|169831903|ref|YP_001717885.1| hypothetical protein Daud_1757 [Candidatus Desulforudis
audaxviator MP104C]
gi|169638747|gb|ACA60253.1| protein of unknown function DUF1078 domain protein [Candidatus
Desulforudis audaxviator MP104C]
Length = 310
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R +++ NIAN +T ++A + +F+ IL+QN + + + +
Sbjct: 10 SGLRNHQVRMDVIANNIANVNTTAFKAGRV-NFQEILSQNIRGTSASTIGVDSINPAQIG 68
Query: 72 WNAHV 76
V
Sbjct: 69 LGMSV 73
>gi|147678426|ref|YP_001212641.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
SI]
gi|146274523|dbj|BAF60272.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
SI]
Length = 147
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 37/132 (28%), Gaps = 22/132 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---------PNYRAKDISSFETILNQN 51
M F I++ R ++S NIAN +T P YR + F +L +
Sbjct: 1 MGLFDSFAISASGLTAERLRLDLISNNIANMNTAGRPDDPAVPAYRRR-FPVFAQVLQEV 59
Query: 52 FLMARTHETHLKES--------DSSGLHWNAHVIEAPLDQTTGVQ-VSGNTVGITNELYK 102
+ D S D+ V + N V E+
Sbjct: 60 RSAGTARPRYKGAGVRVIRIVEDHSPPRLAYEPSHPLADERGYVAYPNINIVN---EMIN 116
Query: 103 SGHIKYLYELNT 114
YE N
Sbjct: 117 MITATRSYEANV 128
>gi|74101656|gb|AAZ99746.1| FlgCL [Aeromonas hydrophila]
Length = 141
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 13/134 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMARTHE 59
+ IA + R V+ N+AN + +RA F T+ +
Sbjct: 6 IYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEEAAFRAIK-PVFSTLYQRVQDADSLGA 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTK 115
++ + P + G + V E+ +E + +
Sbjct: 65 AQVQIAGIVQSDRQVDKRLEPTNPLA--DQDGFVYYSNVNAVEEMADMMSASRGFETSVE 122
Query: 116 LIKKLNSMVMHVVR 129
+I ++NSM ++R
Sbjct: 123 VINRINSMQQGLLR 136
>gi|116872100|ref|YP_848881.1| flagellar basal body rod protein FlgC [Listeria welshimeri serovar
6b str. SLCC5334]
gi|116740978|emb|CAK20098.1| flagellar basal-body rod protein FlgC [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 136
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETAL-------- 57
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--TVGITNELYKSGHIKYLYELNT 114
T +K S+ S + + P N V +T E+ + +Y NT
Sbjct: 58 TGTKGVKVSEISADTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANT 117
Query: 115 KLIKKLNSMV 124
++ M+
Sbjct: 118 SALQANEKMM 127
>gi|322383079|ref|ZP_08056906.1| flagellar hook-basal body-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321152741|gb|EFX45367.1| flagellar hook-basal body-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 271
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN 49
AS N L ++ I++ NIAN +T Y+ KD +SF+ IL
Sbjct: 4 ASVSMNGLQQKLDILANNIANINTVGYKRKD-ASFQEILK 42
>gi|323490149|ref|ZP_08095369.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
gi|323396197|gb|EGA89023.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
Length = 255
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL- 70
+ ++ NIAN +T Y+ K +F+ +L+QN + T+ + ++
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTIGYK-KSTINFQDLLSQNMSNSGTNPMQVGLGTTTSAI 68
Query: 71 ---HWNAHVIEAPLDQTTGVQVSG 91
H V+ ++ + +G
Sbjct: 69 NVNHNPGSVMSTGIETDLAIMGNG 92
>gi|145297453|ref|YP_001140294.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850225|gb|ABO88546.1| lateral flagellar basal body rod protein, LfgC [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 141
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 13/134 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMARTHE 59
+ IA + R V+ N+AN + +RA F T+ +
Sbjct: 6 IYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEDAAFRAIK-PVFSTLYQRVQDADSLGA 64
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTK 115
++ + P + G + V E+ +E + +
Sbjct: 65 AQVQIAGIVQSDRQVDKRLEPTNPLA--DQDGFVYYSNVNAVEEMADMMSASRGFETSVE 122
Query: 116 LIKKLNSMVMHVVR 129
+I ++NSM ++R
Sbjct: 123 VINRINSMQQGLLR 136
>gi|2105146|gb|AAB57897.1| FlgC [Treponema denticola]
Length = 151
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDI-----------S 42
M T IA+ R ++S NIANAS+ P R++ I +
Sbjct: 1 MGLFTSINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRVIVGQKKSGIDWQT 60
Query: 43 SF--ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
F + + + SD+ G H G N V I E+
Sbjct: 61 PFTPQNVERGVGEGVKVLSIEKDTSDTVGFMIRTHPKALKYGPKEGYVEYPN-VNIVTEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M +
Sbjct: 120 VDLISASRAYEANLAVVNGAKDMFQRAL 147
>gi|239996708|ref|ZP_04717232.1| Flagellar hook-associated protein [Alteromonas macleodii ATCC
27126]
Length = 680
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNY 36
M + F +A+ N S+ + S NIAN +TP Y
Sbjct: 1 MSSVDLFSLATSGVNASSKLLQTTSNNIANVNTPGY 36
>gi|209964690|ref|YP_002297605.1| flagellar basal body rod protein FlgG [Rhodospirillum centenum
SW]
gi|209958156|gb|ACI98792.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum
SW]
Length = 261
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP- 80
+++S NIAN +T ++ + + F+ +L QN + + SG+ A V A
Sbjct: 19 EVISNNIANMTTTGFKRQR-AEFQDLLYQNMRRVGSTSSDAGTVVPSGVQIGAGVKTAAV 77
Query: 81 --LDQTTGVQVSGNTVGI 96
+++ + V+GN + +
Sbjct: 78 YRINEQGNISVTGNALDL 95
>gi|332994156|gb|AEF04211.1| flagellar hook-associated protein FlgK [Alteromonas sp. SN2]
Length = 709
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNY 36
M + F +A+ N S+ + S NIAN +TP Y
Sbjct: 1 MSAVDLFSLATSGVNASSKLLQTTSNNIANVNTPGY 36
>gi|217977819|ref|YP_002361966.1| flagellar basal body rod protein [Methylocella silvestris BL2]
gi|217503195|gb|ACK50604.1| flagellar basal body rod protein [Methylocella silvestris BL2]
Length = 241
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
L R ++ N+AN STP YRA+++ F+++L++
Sbjct: 15 LDRRLTTIAANVANQSTPGYRAEEVE-FKSLLSKAGA 50
>gi|251797447|ref|YP_003012178.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
gi|247545073|gb|ACT02092.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
Length = 151
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 37/129 (28%), Gaps = 21/129 (16%)
Query: 20 RQKIVSENIANASTPN----------YRAKDI--------SSFETILNQNFLMARTHETH 61
R ++S NIANA T Y+ K + SSF +LN+ +
Sbjct: 20 RMDVISSNIANAETTRAGYVNGQFVPYKRKMVVLEPMTQNSSFSDLLNKQLEGTSGAQGV 79
Query: 62 LKESDSSGLHWNAHVIEA--PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
V P G N V + E+ YE N +
Sbjct: 80 KATRIIEDQSPTKLVYNPTHPDADADGYVHMPN-VDVAKEMVDMISASRSYEANVTALNA 138
Query: 120 LNSMVMHVV 128
+M +
Sbjct: 139 SKAMFTKAL 147
>gi|56964036|ref|YP_175767.1| flagellar basal body rod protein FlgC [Bacillus clausii KSM-K16]
gi|56910279|dbj|BAD64806.1| flagellar basal-body rod protein FlgC [Bacillus clausii KSM-K16]
Length = 148
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 20/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI----SSFET--ILNQNFLM 54
M + ++ R + + NIANA T RA+ + ++ ++ M
Sbjct: 1 MTMFSSMNVSGSGLTLQRLRMDVAASNIANADTT--RAERVNGEWQPYQRRMVVQGPTSM 58
Query: 55 AR-THETHLKESDSSGLHWNAHVIEAP-----------LDQTTGVQVSGNTVGITNELYK 102
R + + ++ ++ P D VS V I E+
Sbjct: 59 GRFSSDLQKATAELDQGVVAKQIVRDPTPATLVYDPAHPDANEDGYVSKPNVEIAREMVD 118
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ MVM +
Sbjct: 119 ITSATRSYEANVTALQASKGMVMKAL 144
>gi|307638243|gb|ADN80693.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
gi|325996836|gb|ADZ52241.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
gi|325998428|gb|ADZ50636.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
Length = 161
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKIT 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTG-----------VQVSGN--------TV 94
+ D + + +D+ N V
Sbjct: 63 QNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|88704308|ref|ZP_01102022.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
KT71]
gi|88701359|gb|EAQ98464.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
KT71]
Length = 140
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 16/141 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQ---- 50
M +A+ + S R +S N+ANA+ + YRA+ FET+LN+
Sbjct: 1 MSLFDAISVAATSLDAQSTRLNTISSNLANANAVSSSAEETYRAQ-YPVFETMLNELSSA 59
Query: 51 --NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+A + + +SD + D+ + + N+V E+
Sbjct: 60 NGMDAVAGVRVSGITQSDLPAVKEYVPTHPMADDEGFIYRPAINSV---EEMANMMEASR 116
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
Y+ + + + +++ +
Sbjct: 117 SYQDSIEAMNTAKQLILRTLT 137
>gi|118581824|ref|YP_903074.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
2379]
gi|118504534|gb|ABL01017.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
2379]
Length = 145
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 15/142 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS---TPN---YRAKDISSFETILNQNFLM 54
M + +++ + R ++S N+ANA+ TP Y+ KD + F +
Sbjct: 1 MDFFSAMNVSASALSAERTRMNLISSNLANANATRTPEGGPYKRKD-AVFAATPVEGRFA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TVGITNELYKSGHI 106
+E + P Q N V + E+
Sbjct: 60 RALDGAANREIRQVEVQQVVEDQSPPRIQYDPSHPDANPQGYVAMPNVNVIEEMADMIGA 119
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N ++ SM + +
Sbjct: 120 SRTYEANVTAVQTAKSMALKAL 141
>gi|326319098|ref|YP_004236770.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375934|gb|ADX48203.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 246
Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A+ ++RQ +++ N+ANAST +RA ++S+F ++ + +SG
Sbjct: 12 ASAAAQRQAVLANNLANASTNGFRA-EMSTFRSV---PVQGDGSKTRVFALEATSG---- 63
Query: 74 AHVIEAPLDQTTGVQVSGNTV 94
HV Q TG + V
Sbjct: 64 -HVETPGPVQRTGRNLDAMAV 83
>gi|301168504|emb|CBW28094.1| putative flagellar basal-body rod protein [Bacteriovorax marinus
SJ]
Length = 289
Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQ 50
+ ++ N+ANA+TP ++ KD F+ L Q
Sbjct: 31 ETIANNVANANTPGFK-KDQIVFKEYLTQ 58
>gi|241766920|ref|ZP_04764726.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
2AN]
gi|241362624|gb|EER58472.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
2AN]
Length = 425
Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ NIANA+T ++A + F ++ A + +
Sbjct: 3 FQQGLSGLNASSKNLDVIGHNIANANTTGFKASR-AEFAEMVASAIGSAGGNNAGIGVET 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ + V ++GN
Sbjct: 62 ANVAQQFTQGNLTITGNSLDVAINGN 87
>gi|88704306|ref|ZP_01102020.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
gi|88701357|gb|EAQ98462.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
Length = 429
Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A N + +VS NIANAST ++A + F + + L A ++ S
Sbjct: 3 FSTAISGINAATADLGVVSNNIANASTTGFKASR-AEFADVYATSLLGAGSNAIGKGVSL 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ + + + ++GN
Sbjct: 62 AGVTQEFGQGNITFTNNSLDLAINGN 87
>gi|291334316|gb|ADD93977.1| flagellar basal body rod protein FlgG [uncultured marine
bacterium MedDCM-OCT-S09-C247]
Length = 257
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETHLKES 65
+A N + ++++ N+AN +T ++ +D ++FE++ Q +T L
Sbjct: 3 VAKTGLNAQQYKMQVIANNLANVNTTGFK-RDRANFESLFYQIVKTAGAQTADDTALTSP 61
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ G + Q V N++ +
Sbjct: 62 LAVGTGVKVVSTQKLFTQGGLVSTD-NSLDL 91
>gi|168180921|ref|ZP_02615585.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
gi|182668204|gb|EDT80183.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
gi|322806984|emb|CBZ04554.1| flagellar hook protein FlgE [Clostridium botulinum H04402 065]
Length = 334
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTRLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 74
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 75 GIFTKFTTGNMQTTGRNLDM 94
>gi|308050022|ref|YP_003913588.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
9799]
gi|307632212|gb|ADN76514.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
9799]
Length = 261
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 30/65 (46%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG+ +A + Q + G V + E+ + + YE+N K++ +
Sbjct: 192 YRETAASGVAIEGIPGDAAIGQLKQGTLEGANVNVVEEMVEMISTQRAYEMNAKVVSSTD 251
Query: 122 SMVMH 126
M+ +
Sbjct: 252 DMLKY 256
>gi|315649858|ref|ZP_07902941.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
gi|315274832|gb|EFU38213.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
Length = 274
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A N L +R ++++N+AN +T Y+ K+ +SF+ +L Q + H K+ D +G
Sbjct: 8 AMVSMNALQQRLDVIADNMANVNTAGYKKKE-ASFDDVLTQV-------QGHHKDFDRTG 59
Query: 70 LHWN 73
Sbjct: 60 RSTP 63
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 76 VIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
AP + +SG + V +T+E+ K ++ Y+L + + ++M+
Sbjct: 214 TPPAPGEPPKSSVLSGFVEQSNVNLTDEMTKMMEVQRAYQLMARALSSSDTMM 266
>gi|114566393|ref|YP_753547.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337328|gb|ABI68176.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 475
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ NIAN +T Y+ + F+ L Q A ++ ++ +
Sbjct: 10 SGLRNHQTRMDVIGNNIANINTAGYKKSRVV-FQDTLYQTMRGATRPDSSGSRGGTNPMG 68
Query: 72 WNAHVIEAPLDQ 83
+ + +DQ
Sbjct: 69 IGLGMSVSSIDQ 80
>gi|34497157|ref|NP_901372.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
ATCC 12472]
gi|34103014|gb|AAQ59377.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
ATCC 12472]
Length = 134
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 20/139 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +IA + R V+ NIANA T + YR + F + + +
Sbjct: 1 MSFRDISRIAGSAMTAQTVRLNTVASNIANADTASGAEQSAYRGRK-PVFSSQMQGEGMG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLY 110
+ + + H + + GN V E+ +
Sbjct: 60 VQVLDVVQNQEPVRKAHEPGNPL---------ADADGNVFYSNVNAVEEMTDMLSATRAF 110
Query: 111 ELNTKLIKKLNSMVMHVVR 129
+ N +++ K+ +M +++
Sbjct: 111 QTNVEVLAKVKTMQQDLLK 129
>gi|311030132|ref|ZP_07708222.1| flagellar basal body rod protein FlgC [Bacillus sp. m3-13]
Length = 150
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 42/148 (28%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-TPN---------YRAKDIS------SF 44
M I+S R ++S N+AN T YR K + SF
Sbjct: 1 MSMFKSMNISSSALTAQRLRMDVISSNMANVDSTRGEYRNGQWEPYRRKLVETAPKENSF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNEL 100
++ L + + +K + V+ P G V E+
Sbjct: 61 QSYLQKASGNGSGFGSGVKVTRIKEDDAPFRVMFDPEHPDA--NEDGYVELPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + ++M +
Sbjct: 119 VDLMSASRSYEANVTVFNASKGIMMKTL 146
>gi|138896904|ref|YP_001127357.1| flagellar hook-basal body protein [Geobacillus
thermodenitrificans NG80-2]
gi|134268417|gb|ABO68612.1| Flagellar hook-basal body protein [Geobacillus
thermodenitrificans NG80-2]
Length = 273
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA------RTHETHL 62
A+ N L +R +S NI N++T ++ ++ +SF +L Q R +
Sbjct: 7 TAANTMNALQQRLDTLSHNIVNSNTTGFKRRE-ASFAELLTQQVDRLPDDEAPRQTPAGV 65
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + +GL V TG +
Sbjct: 66 RYGNGAGLASTMLVTAQGPLTETGRALD 93
>gi|70731825|ref|YP_261567.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
Pf-5]
gi|68346124|gb|AAY93730.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens
Pf-5]
Length = 147
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + F IA + + R V+ NIANA + + YRA+ + Q
Sbjct: 1 MSLASVFNIAGSGMSAQTTRLNTVASNIANAESVSSSIDQTYRAR--HPVFATMFQGAQS 58
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG-----------NTVGITNELYKS 103
+ + + V+E + + + V + E+
Sbjct: 59 GGSDSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADM 118
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
++ N +++ +M+ V+
Sbjct: 119 ISASRSFQTNAEMMNTAKTMMQKVLT 144
>gi|167463161|ref|ZP_02328250.1| flagellar hook-basal body protein [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 275
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN 49
AS N L ++ I++ NIAN +T Y+ KD +SF+ IL
Sbjct: 8 ASVSMNGLQQKLDILANNIANINTVGYKRKD-ASFQEILK 46
>gi|291562032|emb|CBL40848.1| flagellar basal-body rod protein FlgC [butyrate-producing bacterium
SS3/4]
Length = 149
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 17/145 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETI 47
M + F I++ + R I +ENIAN T YR K++ +SF
Sbjct: 1 MAFLGSFDISASGMSAQRVRMDIAAENIANMDTTRTESGGPYRRKNVLLESYSDTSFAQA 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKS 103
+ H S + + + G V + E S
Sbjct: 61 MENAARGKGITSRHAGVRVSGIVEDDREAKKVYNPDHPDADADGYVTMPNVDVLKETVDS 120
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + + M +
Sbjct: 121 MSATRSYEANVTALNAIKLMAQKAL 145
>gi|16799794|ref|NP_470062.1| flagellar basal body rod protein FlgC [Listeria innocua Clip11262]
gi|16802753|ref|NP_464238.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
EGD-e]
gi|46906962|ref|YP_013351.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091674|ref|ZP_00229470.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
4b H7858]
gi|47095277|ref|ZP_00232888.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
1/2a F6854]
gi|217965191|ref|YP_002350869.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
HCC23]
gi|224498793|ref|ZP_03667142.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
Finland 1988]
gi|224501984|ref|ZP_03670291.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
R2-561]
gi|226223342|ref|YP_002757449.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
Clip81459]
gi|254824009|ref|ZP_05229010.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
J1-194]
gi|254829368|ref|ZP_05234055.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
N3-165]
gi|254830298|ref|ZP_05234953.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
10403S]
gi|254900053|ref|ZP_05259977.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
J0161]
gi|254911394|ref|ZP_05261406.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
J2818]
gi|254932009|ref|ZP_05265368.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
HPB2262]
gi|254935721|ref|ZP_05267418.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
F6900]
gi|255022492|ref|ZP_05294478.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
J1-208]
gi|255025679|ref|ZP_05297665.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
J2-003]
gi|284801041|ref|YP_003412906.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
08-5578]
gi|284994183|ref|YP_003415951.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
08-5923]
gi|290894009|ref|ZP_06556984.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
J2-071]
gi|16410100|emb|CAC98789.1| lmo0711 [Listeria monocytogenes EGD-e]
gi|16413171|emb|CAC95951.1| lin0719 [Listeria innocua Clip11262]
gi|46880228|gb|AAT03528.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
serotype 4b str. F2365]
gi|47016348|gb|EAL07270.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
1/2a F6854]
gi|47019993|gb|EAL10730.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
4b H7858]
gi|217334461|gb|ACK40255.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
HCC23]
gi|225875804|emb|CAS04507.1| Putative flagellar basal-body rod protein FlgC [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601782|gb|EEW15107.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
N3-165]
gi|258608305|gb|EEW20913.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
F6900]
gi|284056603|gb|ADB67544.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
08-5578]
gi|284059650|gb|ADB70589.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
08-5923]
gi|290556455|gb|EFD89994.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
J2-071]
gi|293583560|gb|EFF95592.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
HPB2262]
gi|293589332|gb|EFF97666.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
J2818]
gi|293593236|gb|EFG00997.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
J1-194]
gi|307570250|emb|CAR83429.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
gi|313610106|gb|EFR85431.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
F2-208]
gi|328467276|gb|EGF38356.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 1816]
gi|328475672|gb|EGF46421.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 220]
gi|332311135|gb|EGJ24230.1| Flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
Scott A]
Length = 136
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L +
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKV 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + SD+ + ++ V + V +T E+ + +Y NT
Sbjct: 66 SEIS----SDTGSVKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVGQKMYAANTSA 119
Query: 117 IKKLNSMV 124
++ M+
Sbjct: 120 LQANEKMM 127
>gi|260779349|ref|ZP_05888241.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605513|gb|EEX31808.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
BAA-450]
Length = 144
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 10/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + IA N + R V+ N+ANA P+ K + F T+ ++ L A
Sbjct: 1 MSFTDIYSIAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSKTQLSA 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLY 110
E + +A E + + + V + +E+ +
Sbjct: 61 SKESYPNAEVRIVDVVQSAGQAEKRFEPSNPLANDEGYVYYPDIDVVSEMADMMSATRSF 120
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N +++ + SM ++R
Sbjct: 121 ETNVEVLSNVKSMQQGLLR 139
>gi|308185345|ref|YP_003929478.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
gi|308061265|gb|ADO03161.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
Length = 161
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKIA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TV 94
+ + L S + PL + N V
Sbjct: 63 QNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|149203125|ref|ZP_01880096.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
gi|149143671|gb|EDM31707.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
Length = 261
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ +IA+ R + +S N+AN ST Y A+ + F + Q A T
Sbjct: 1 MHILKIAATGMAAQQMRVETISNNLANMSTTGYNARR-AEFADLHYQQLARAGTINAADG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
T L GL I L Q + Q +G
Sbjct: 60 TVLPTGVQLGLGVRPSAISVQLAQGSLTQTNG 91
>gi|94264091|ref|ZP_01287890.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
MLMS-1]
gi|93455507|gb|EAT05697.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
MLMS-1]
Length = 144
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +T I+ R I S N+ANA+T YRAK + L ++F
Sbjct: 1 MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEARPLERDFNT 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
+ + N V ++ + +
Sbjct: 61 TLQGAASRLRKVEVAEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMNARR 120
Query: 109 LYELNTKLIKKLNSMVMHVV 128
YE N + + M + +
Sbjct: 121 SYEANVAALDAVKEMALRAL 140
>gi|302389667|ref|YP_003825488.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
16646]
gi|302200295|gb|ADL07865.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
16646]
Length = 404
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+ ++ NIAN +T Y+ ++ F+ L+Q A + + + ++ + +
Sbjct: 15 HQIKMDVIGNNIANVNTVGYKKSRVT-FQDTLSQTMRGASSAQGNRGGTNPMQIGLGMTI 73
Query: 77 IE-APLDQTTGVQVSGNTVGITNE 99
+ T ++ +GN + E
Sbjct: 74 AAIDTIHTPTSLEATGNMTDLAIE 97
>gi|226225711|ref|YP_002759817.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
T-27]
gi|226088902|dbj|BAH37347.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
T-27]
Length = 262
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
M P + A+ R ++++ N+AN +TP ++ + + FE +L Q +
Sbjct: 1 MDP--ALRAAATGMMAQQTRTEVIAHNLANVNTPGFK-RSRAHFEDLLYQTVQGQQ 53
>gi|315281376|ref|ZP_07870013.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
gi|313614973|gb|EFR88480.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
Length = 136
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L +
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKV 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + SD+ + ++ V + V +T E+ + +Y NT
Sbjct: 66 SEIS----SDTGSVKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVGQKMYAANTSA 119
Query: 117 IKKLNSMV 124
++ M+
Sbjct: 120 LQANEKMM 127
>gi|260682026|ref|YP_003213311.1| flagellar basal-body rod protein [Clostridium difficile CD196]
gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291]
gi|260208189|emb|CBA60524.1| flagellar basal-body rod protein [Clostridium difficile CD196]
gi|260211640|emb|CBE01891.1| flagellar basal-body rod protein [Clostridium difficile R20291]
Length = 128
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 8/126 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANAST---PNYRA--KDISSFETILNQNFLMARTHETHL 62
+I++ S + I+S N+AN + PN A + + SFE + M T +
Sbjct: 2 RISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSV 61
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
++ S + V I E+ Y+ N + S
Sbjct: 62 EDDKSPLKEVYDPSHPDAKPNGYVEYPN---VNILVEMTDLITASRAYDSNVDTLNAQKS 118
Query: 123 MVMHVV 128
M+ +
Sbjct: 119 MISKAL 124
>gi|295400717|ref|ZP_06810694.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112591|ref|YP_003990907.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
gi|294977298|gb|EFG52899.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217692|gb|ADP76296.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
Length = 274
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRA 38
F A+ R ++++ NIANA+TP Y+A
Sbjct: 5 FYTAASGMMAQQRRVEMLTNNIANANTPGYKA 36
>gi|148554187|ref|YP_001261769.1| flagellar basal body rod protein FlgG [Sphingomonas wittichii
RW1]
gi|148499377|gb|ABQ67631.1| flagellar basal-body rod protein FlgG [Sphingomonas wittichii
RW1]
Length = 262
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM-ARTHETHLKES 65
+A + + R ++++ N+AN +T ++ +D +SFET+ Q K +
Sbjct: 6 LHVARTGLDAQNMRMQVIANNLANVNTTGFK-RDRASFETLAYQAMTAPGAASSDSTKFA 64
Query: 66 DSSGLHWNAHVIEAPLDQTTGV-QVSGNTVGITNE 99
+ L + QT G Q +GN + + +
Sbjct: 65 TGTNLGTGVQINGTAKIQTQGALQETGNPLDMAIQ 99
>gi|332140544|ref|YP_004426282.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
'Deep ecotype']
gi|327550566|gb|AEA97284.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
'Deep ecotype']
Length = 140
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD---ISSFETILNQN 51
M QI+S + R + NIANA++ + YRA+ ++ + +
Sbjct: 1 MSLFNVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRDQ 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
A + ESD+ + + + + V I E+ YE
Sbjct: 61 SKGAGVQVKGIVESDAPLQVEYSPNNPMADENGYIYKPN---VNIVEEMANMMSASKAYE 117
Query: 112 LNTKLIKKLNSMVMHVVR 129
N ++ + V++
Sbjct: 118 TNVQVADTTKRIFRRVLQ 135
>gi|134300239|ref|YP_001113735.1| hypothetical protein Dred_2400 [Desulfotomaculum reducens MI-1]
gi|134052939|gb|ABO50910.1| protein of unknown function DUF1078 domain protein
[Desulfotomaculum reducens MI-1]
Length = 856
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--RTHETHLKESDSSG 69
R + NIAN +T Y++ + +F+ L+Q A T+ + S G
Sbjct: 10 SGMRNHQTRMDVTGNNIANVNTNGYKSSRV-NFQDTLSQTVRSAGNGTNPAQVGSGMSVG 68
Query: 70 LHWNAHVIEAPLDQTTGVQVS----GN 92
N + + P+ Q+TG + GN
Sbjct: 69 SVSN-NFTQGPM-QSTGRTLDLGIQGN 93
>gi|323697455|ref|ZP_08109367.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
sp. ND132]
gi|323457387|gb|EGB13252.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
desulfuricans ND132]
Length = 108
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ LS Q++ + NIAN +T +RA +S L + ES + G
Sbjct: 7 SALSALSTVQEVSANNIANMNTDGFRAGAVS-----LESGPGGQGVEVASITESTAPGAF 61
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
N GV+ S NT + E+ +E NT I+ M
Sbjct: 62 IN------------GVETS-NT-DVGREMVDMIVTSRAFEANTTFIRASEEM 99
>gi|311033283|ref|ZP_07711373.1| flagellar basal-body rod protein [Bacillus sp. m3-13]
Length = 273
Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAK--DISSFETILNQNFLMA-RTHETHLK 63
F A+ R +++S N++NA+TP Y+A + SF +L Q A T+
Sbjct: 5 FYTATAGMISQQRRMEMMSNNLSNANTPGYKADQGSLRSFPDMLLQRMEQASGTNTFSPM 64
Query: 64 ESDSSGLHWNAHVI---EAPLDQTTGVQVSGNTVGI 96
+ + + + V P ++ +GN +
Sbjct: 65 SNPNDPVRLSTGVYLQETKPKHTQGDLRPTGNDTDL 100
>gi|239995127|ref|ZP_04715651.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii ATCC
27126]
Length = 140
Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD---ISSFETILNQN 51
M QI+S + R + NIANA++ + YRA+ ++ + +
Sbjct: 1 MSLFNVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRDQ 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
A + ESD+ + + + + V I E+ YE
Sbjct: 61 SKGAGVQVKGIVESDAPLQMEYSPNNPMADENGYIYKPN---VNIVEEMANMMSASKAYE 117
Query: 112 LNTKLIKKLNSMVMHVVR 129
N ++ + V++
Sbjct: 118 TNVQVADTTKRIFRRVLQ 135
>gi|306820111|ref|ZP_07453759.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551889|gb|EFM39832.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 145
Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 17/124 (13%)
Query: 20 RQKIVSENIANASTPNYR-----AKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
R I+S+NIANA T + + ++ F+ + ++ + ++ D+ G+
Sbjct: 20 RMDIISKNIANAQTTRTKNGLPYKRQVAVFKEA--EGDSSFKSVLENKRKKDTGGVEVVG 77
Query: 75 HVIEAPL----DQTTGVQVSGN------TVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
V + N V + E+ + YE N + +M+
Sbjct: 78 IVEDKSDFKLRYDPGHPDADENGYVKMPNVELITEMVDMITAQRAYEANATAVNTSKAML 137
Query: 125 MHVV 128
+
Sbjct: 138 QKAI 141
>gi|126697817|ref|YP_001086714.1| flagellar basal-body rod protein [Clostridium difficile 630]
gi|254973910|ref|ZP_05270382.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
gi|255091296|ref|ZP_05320774.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
gi|255305270|ref|ZP_05349442.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
gi|255312954|ref|ZP_05354537.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
gi|255515713|ref|ZP_05383389.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
gi|255648807|ref|ZP_05395709.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
gi|306518922|ref|ZP_07405269.1| flagellar basal body rod protein FlgC [Clostridium difficile
QCD-32g58]
gi|115249254|emb|CAJ67067.1| Flagellar basal-body rod protein FlgC [Clostridium difficile]
Length = 134
Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 8/126 (6%)
Query: 8 QIASQHANWLSERQKIVSENIANAST---PNYRA--KDISSFETILNQNFLMARTHETHL 62
+I++ S + I+S N+AN + PN A + + SFE + M T +
Sbjct: 8 RISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSV 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
++ S + V I E+ Y+ N + S
Sbjct: 68 EDDKSPLKEVYDPSHPDAKPNGYVEYPN---VNILVEMTDLITASRAYDSNVDTLNAQKS 124
Query: 123 MVMHVV 128
M+ +
Sbjct: 125 MISKAL 130
>gi|307293785|ref|ZP_07573629.1| flagellar basal-body rod protein FlgG [Sphingobium
chlorophenolicum L-1]
gi|306879936|gb|EFN11153.1| flagellar basal-body rod protein FlgG [Sphingobium
chlorophenolicum L-1]
Length = 262
Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+A + + + ++++ N+AN +T ++ +D + FET+ Q + A + +
Sbjct: 6 LHVARTGLDAQNTKMRVIANNLANVNTTAFK-RDRADFETLAYQQIVAAGANSDSENKFA 64
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVS--GNTVGITNE 99
+ + ++ ++ GNT+ + E
Sbjct: 65 TGLNLGSGVALQGTSKINAQGTLNQTGNTLDMAIE 99
>gi|304310785|ref|YP_003810383.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
gi|301796518|emb|CBL44726.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
Length = 145
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 40/143 (27%), Gaps = 17/143 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + F IA + + R S NIANA + YRA+ F
Sbjct: 1 MSLSSVFDIAGSGMSAQTVRLNTTSSNIANAESVASSVDKTYRARH-PVFMAQYTAALGN 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEA---------PLDQTTGVQVSGNTVGITNELYKSGH 105
T K + + P G N V + E+
Sbjct: 60 RPTDPLTGKANAGVDVVGIVESQAPLQLRYEPDHPYADEKGYVAYPN-VNVVEEMTNMIS 118
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
++ N ++ M+ V+
Sbjct: 119 ASRSFQTNADVMNSAKQMLSAVL 141
>gi|225849147|ref|YP_002729311.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643183|gb|ACN98233.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 137
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHET 60
+++ R + + N+AN ++ YR + + FE +L+ ++
Sbjct: 6 LEVSVSGMQAERVRIDLSASNLANVNSTRAEDGQPYR-RKVPVFEAVLDSQSKNTPIYKV 64
Query: 61 HLKE--SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
+KE +D S DQ V++ V E+ YE N
Sbjct: 65 RVKEIQTDPSPFKLKFDPNNPDADQNGYVRLP--NVDPIREMVDMMSAMRSYEANLTAFN 122
Query: 119 KLNSMVMHVV 128
M++ +
Sbjct: 123 THKDMILKSL 132
>gi|255099413|ref|ZP_05328390.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
Length = 134
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 10/127 (7%)
Query: 8 QIASQHANWLSERQKIVSENIANAST---PNYRA--KDISSFETILNQNFLMARTHETHL 62
+I++ S + I+S N+AN + PN A + + SFE + M T +
Sbjct: 8 RISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSV 67
Query: 63 KESDSS-GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ S ++ +A + V I E+ Y+ N +
Sbjct: 68 EDDKSPLKKVYDPSHPDAKPNGYVEYP----NVNILVEMTDLITASRAYDSNVDTLNAQK 123
Query: 122 SMVMHVV 128
SM+ +
Sbjct: 124 SMISKAL 130
>gi|157694040|ref|YP_001488502.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
gi|157682798|gb|ABV63942.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
Length = 279
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMAR 56
A+ R +++S NIANA+TP Y+A + + +F +L R
Sbjct: 7 TATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESGR 56
>gi|56695100|ref|YP_165447.1| flagellar basal body rod protein FlgG [Ruegeria pomeroyi DSS-3]
gi|56676837|gb|AAV93503.1| flagellar basal-body rod protein FlgG [Ruegeria pomeroyi DSS-3]
Length = 261
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +IA+ + R + +S N+AN +T Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARR-AEFADLHYQQIARAGTVNASDG 59
Query: 64 ESDSSGLHWNAHVIEAPLD---QTTGVQVSGNTVGITNE 99
+G+ V A + + + +GN + + E
Sbjct: 60 TVLPTGVQLGLGVRPAAVTVHLEQGALSATGNDLDLAIE 98
>gi|296531743|ref|ZP_06894568.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis
ATCC 49957]
gi|296267926|gb|EFH13728.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis
ATCC 49957]
Length = 485
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 17 LSERQK-IVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+RQ I+S NIANA+TP Y +D+ E ++ T
Sbjct: 16 AEQRQAAILSNNIANANTPGYVRRDMPRSERLVAGIGSGVDT 57
>gi|319409192|emb|CBI82836.1| Flagellar basal-body rod protein flgF [Bartonella schoenbuchensis
R1]
Length = 244
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 17 LSERQKIVSENIANASTPNYRA 38
L+ R + +++N+AN +TP +RA
Sbjct: 15 LARRMETIAQNMANVNTPGFRA 36
>gi|258514011|ref|YP_003190233.1| hypothetical protein Dtox_0696 [Desulfotomaculum acetoxidans DSM
771]
gi|257777716|gb|ACV61610.1| protein of unknown function DUF1078 domain protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 263
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
R ++ NIAN +T Y++ + F+ +L Q +
Sbjct: 10 SGMKNHQTRMDVIGNNIANVNTTGYKSSRVQ-FKDVLGQTIAGGQ 53
>gi|296133051|ref|YP_003640298.1| flagellar basal-body rod protein FlgC [Thermincola sp. JR]
gi|296031629|gb|ADG82397.1| flagellar basal-body rod protein FlgC [Thermincola potens JR]
Length = 145
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 40/143 (27%), Gaps = 19/143 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAK---------DI-SSF 44
M F I++ R ++SENIAN +T YR K D F
Sbjct: 1 MGMFDSFDISASGLTAQRLRMDLISENIANVNTTRTASGGPYRRKLAVFEAKNGDFDKVF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
+ L+ T + E S Q + V I E+
Sbjct: 61 QERLDSVSPGKGVRVTKIIEDQSPLKLVYNPNHPDANAQGYVEMPN---VNIVTEMVDMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHV 127
YE N I+ M
Sbjct: 118 SATRAYEANVASIRATKEMFAKA 140
>gi|194015045|ref|ZP_03053662.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
gi|194014071|gb|EDW23636.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
Length = 150
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 25/148 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDIS------SF 44
++ F + A+ L+ R +VS N+AN T YR K ++ SF
Sbjct: 1 MSIFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESF 60
Query: 45 ETILNQNFLMARTHETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+ILN N + +K + D + + ++ VQ V E+
Sbjct: 61 SSILNSNMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTP--NVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM+M +
Sbjct: 119 VDLISSSRSYEANVTALNANKSMLMKAL 146
>gi|221635450|ref|YP_002523326.1| flagellar basal-body rod protein FlgF (Putative proximal rod
protein) [Thermomicrobium roseum DSM 5159]
gi|221157298|gb|ACM06416.1| flagellar basal-body rod protein FlgF (Putative proximal rod
protein) [Thermomicrobium roseum DSM 5159]
Length = 248
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMARTHE 59
T +Q A+ + RQ ++ N+AN TP YR ++ I F+ +
Sbjct: 4 TIYQAAAGMMAQFA-RQLTLATNLANIETPGYRQQESTIRDFQQMFLLRLGRGEASP 59
>gi|51894131|ref|YP_076822.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
gi|51857820|dbj|BAD41978.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
Length = 418
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLKESDSSG 69
R ++ NIAN +T ++A ++ F + NQ T+ + + G
Sbjct: 14 HQTRMDVIGNNIANVNTTGFKASRVT-FTDVFNQTLSSGSALTNPQQIGLGVAVG 67
>gi|254470407|ref|ZP_05083811.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
gi|211960718|gb|EEA95914.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
Length = 260
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S N+AN T Y+ + + F+ +L +N T +
Sbjct: 1 MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQR-ADFQDLLYENQRRMGTETSDAG 59
Query: 64 ESDSSGLHWNAHVIEAPLD---QTTGVQVSGN 92
+G+ + V A V +GN
Sbjct: 60 TIVPNGVQIGSGVRTAATTRIMSPGSVTQTGN 91
>gi|238927475|ref|ZP_04659235.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
gi|238884757|gb|EEQ48395.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
Length = 680
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R +V NIAN +T ++A ++ F +++QN A + + + V
Sbjct: 15 HQTRMDVVGNNIANVNTTGFKASRVT-FADMISQNLSGASAPNGTIGGVNPKQIGLGMSV 73
Query: 77 IEAPLDQTTG-VQVSGNTVGI 96
L T G VQ +G I
Sbjct: 74 ASTDLLYTNGSVQQTGKNTDI 94
>gi|260768785|ref|ZP_05877719.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
gi|260616815|gb|EEX42000.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
gi|315180488|gb|ADT87402.1| flagellar basal-body rod protein C [Vibrio furnissii NCTC 11218]
Length = 140
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 11/138 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M ++ + + R +S N+ANA + D+ F ++ N +
Sbjct: 1 MSFNGIYETSGSAMMAQTIRLNTISSNLANADSVASNPNDVYKPLKPVFTSVFNSLSAQS 60
Query: 56 RTHETHLKESD---SSGLHWNAHVIEAPLDQTTG-VQVSGNTVGITNELYKSGHIKYLYE 111
+ ++ +D SG+ + + PL G V SG V NE+ +E
Sbjct: 61 ASGSVPVRIADVIEVSGMSESRYEPGHPLANNEGYVYHSGINVV--NEMADMMSSTRSFE 118
Query: 112 LNTKLIKKLNSMVMHVVR 129
N +++ + SM ++R
Sbjct: 119 ANVEVLNNVKSMQQSLMR 136
>gi|194016593|ref|ZP_03055207.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
ATCC 7061]
gi|194012066|gb|EDW21634.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
ATCC 7061]
Length = 279
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMAR 56
A+ R +++S NIANA+TP Y+A + + +F +L R
Sbjct: 7 TATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESGR 56
>gi|221636059|ref|YP_002523935.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
5159]
gi|221158060|gb|ACM07178.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
5159]
Length = 151
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 20/147 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI-------SSFETI 47
M + +++ R + + N+AN T Y + + S F +
Sbjct: 1 MGILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARL 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELY 101
+ + T + + +G+ + + D T N + + +E+
Sbjct: 61 VQTRTGLVETTPSAGRGVQVAGIVVDRRAVREVYD-PTHPDADANGIVRYPDIDVVSEMT 119
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ L +M M +
Sbjct: 120 NLMAATRAYEANVTVLDALKTMAMRAL 146
>gi|304438415|ref|ZP_07398355.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368498|gb|EFM22183.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 678
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R +V NIAN +T ++A ++ F +++QN A + + + + V
Sbjct: 15 HQTRMDVVGNNIANVNTTGFKASRVT-FADMISQNLSGASSPTGTIGGVNPKQIGLGMSV 73
Query: 77 IEAPLDQTTG-VQVSGNTVGI 96
L T G VQ +G +
Sbjct: 74 ASTDLLYTNGSVQQTGKNTDV 94
>gi|289433989|ref|YP_003463861.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|315301963|ref|ZP_07872959.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
F6-596]
gi|289170233|emb|CBH26773.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|313629670|gb|EFR97807.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
F6-596]
gi|313639044|gb|EFS04033.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
S4-171]
Length = 136
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +IS FET L +
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVMSEISPFETALTGTKGVKV 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + SD+ + ++ V + V +T E+ + +Y NT
Sbjct: 66 SEIS----SDTGSVKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVGQKMYAANTSA 119
Query: 117 IKKLNSMV 124
++ M+
Sbjct: 120 LQANEKMM 127
>gi|328545467|ref|YP_004305576.1| flagellar basal body rod protein [polymorphum gilvum SL003B-26A1]
gi|326415208|gb|ADZ72271.1| Flagellar basal body rod protein [Polymorphum gilvum SL003B-26A1]
Length = 241
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
LS R + V+ N+AN +T YRA +I F +L++
Sbjct: 15 LSNRLETVARNVANMNTAGYRADEIK-FAEVLSKAGA 50
>gi|226939373|ref|YP_002794446.1| FlgF1 [Laribacter hongkongensis HLHK9]
gi|226714299|gb|ACO73437.1| FlgF1 [Laribacter hongkongensis HLHK9]
Length = 247
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
IA A + +Q+ + N+ANA TP ++A ++++F L T + +
Sbjct: 4 MLYIAMNGAKHVELQQQTTANNLANAHTPGFKA-ELNAFRA-LPVVGDGTPTRAYSVDHT 61
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSG 91
+I DQ V+ G
Sbjct: 62 TGHDES-QGPMITTGNDQDFAVRGRG 86
>gi|160939631|ref|ZP_02086979.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
BAA-613]
gi|158437422|gb|EDP15186.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
BAA-613]
Length = 144
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 37/140 (26%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + I R I+ +N+AN +T Y+ K + E LN +
Sbjct: 1 MGYLDSLNITGSALTAERFRTDIIMQNLANQNTTRTAEGGPYKRKQVVFRENTLNFKSEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
+ + P+ + V E+
Sbjct: 61 GKAMTKAENGGVFVEEVVESQNPSVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAASR 120
Query: 109 LYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 121 AYEANVTALNVAKSMALKAL 140
>gi|322382305|ref|ZP_08056212.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153658|gb|EFX46033.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 129
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 32/125 (25%), Gaps = 17/125 (13%)
Query: 21 QKIVSENIANAS-TPN---------YR-------AKDISSFETILNQNFLMARTHETHLK 63
++S NIANA T Y+ K+ ++F L +
Sbjct: 1 MDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVS 60
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ D V V I E+ YE N + M
Sbjct: 61 NIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDMISATRSYEANVTALNATKGM 120
Query: 124 VMHVV 128
+ +
Sbjct: 121 ITKAL 125
>gi|319898631|ref|YP_004158724.1| flagellar basal-body rod protein flgF [Bartonella clarridgeiae
73]
gi|319402595|emb|CBI76140.1| Flagellar basal-body rod protein flgF [Bartonella clarridgeiae
73]
Length = 244
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 17 LSERQKIVSENIANASTPNYRA 38
L R + +++N+AN +TP +RA
Sbjct: 15 LERRMETIAQNMANVNTPGFRA 36
>gi|241766921|ref|ZP_04764727.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii
2AN]
gi|241362625|gb|EER58473.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii
2AN]
Length = 246
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
AN ++RQ +++ N+ANAST +RA ++S+F ++ + +SG
Sbjct: 12 ANAAAQRQAVLANNLANASTQGFRA-EMSTFRSV---PLQGDGSKTRVFALEATSGHLQT 67
Query: 74 AHVIEAPLDQTTGVQVSGNT 93
++ + + GN
Sbjct: 68 PGPVQRTGRALDAMAM-GNA 86
>gi|52080221|ref|YP_079012.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
14580]
gi|52785598|ref|YP_091427.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
14580]
gi|319646000|ref|ZP_08000230.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
gi|52003432|gb|AAU23374.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
14580]
gi|52348100|gb|AAU40734.1| FlgC [Bacillus licheniformis ATCC 14580]
gi|317391750|gb|EFV72547.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
Length = 150
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 43/148 (29%), Gaps = 22/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN----------YRAKDIS------SF 44
M I++ R VS N+AN T YR K +S SF
Sbjct: 1 MGVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNEL 100
++L + + +K + S ++ P G V E+
Sbjct: 61 SSVLQSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDA--NEDGYVQMPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M+M +
Sbjct: 119 VDLMSSTRSYEANVTAMNATKGMLMKAL 146
>gi|88811803|ref|ZP_01127057.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
gi|88791194|gb|EAR22307.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
Length = 261
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKES 65
+A + R V+ N+AN +T ++ KD + FE ++ Q A + L
Sbjct: 7 VAKTGLDAQQTRMSTVANNLANVNTTGFK-KDRAKFEDLVYQTVRQAGGQSSQNNRLPSG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
G + Q VQ GN + +
Sbjct: 66 LMLGTGVRVAATQKMFTQGNIVQT-GNALDL 95
>gi|87306342|ref|ZP_01088489.1| FlgF [Blastopirellula marina DSM 3645]
gi|87290521|gb|EAQ82408.1| FlgF [Blastopirellula marina DSM 3645]
Length = 255
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R ++++ NIAN T ++ +D++ + +Q + + +D G +V E
Sbjct: 18 RVEVLANNIANVDTTGFK-RDLAVLQARYSQAIEDGKDYPNSGSINDVGG---GVYVSEK 73
Query: 80 PLDQTTGV 87
D + GV
Sbjct: 74 VTDYSRGV 81
>gi|296531742|ref|ZP_06894567.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
gi|296267925|gb|EFH13727.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
Length = 506
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + ++ N + + +S NIAN+ST Y+ D + FE+++ +
Sbjct: 1 MTAINALRTSTSGLNAQAVKLSGISNNIANSSTVGYKRVD-TQFESLVLEGSSSGSYALA 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + + V +D V +G
Sbjct: 60 GVTPRNRVEISKVGQVQRTGVDTDIAVSGNG 90
>gi|218288292|ref|ZP_03492591.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
acidocaldarius LAA1]
gi|218241651|gb|EED08824.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
acidocaldarius LAA1]
Length = 144
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 12/119 (10%)
Query: 22 KIVSENIANASTPN------YRAK--DISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+++ NIAN +T YRA+ + + E ++ + + + + + + +
Sbjct: 22 NVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALGQAVQGIGGGVEVTSITQD 81
Query: 74 AHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ D + V+G + V +T ++ Y+ N M + +
Sbjct: 82 TSPFQLIYDPSNPDAVNGYVESSNVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 140
>gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
BC]
gi|330826755|ref|YP_004390058.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
K601]
gi|317119100|gb|ADV01589.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
BC]
gi|329312127|gb|AEB86542.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
K601]
Length = 426
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ NIAN++T ++A + F +++ A T +
Sbjct: 3 FQQGLSGLNASSKNLDVIGHNIANSNTVGFKASR-TEFASMVATAIGTASTGNAGIGVQV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ V ++GN
Sbjct: 62 GAVAQQFTQGNITVTGNNLDVAINGN 87
>gi|258622486|ref|ZP_05717508.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
gi|262173352|ref|ZP_06041029.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
gi|258585186|gb|EEW09913.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
gi|261890710|gb|EEY36697.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
Length = 144
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + IA + R V+ N+ANA Y+A F T+ N+ +
Sbjct: 1 MSFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALK-PVFATVYNKTQMA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYL 109
A E + NA E + + V + E+
Sbjct: 60 ASDSAYPSAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRS 119
Query: 110 YELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM +++
Sbjct: 120 FETNVEVLSNVKSMQQGLLK 139
>gi|157692298|ref|YP_001486760.1| flagellar basal body rod protein FlgC [Bacillus pumilus SAFR-032]
gi|157681056|gb|ABV62200.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
Length = 150
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 25/148 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ F + A+ L+ R +VS N+AN T RAK + + + +
Sbjct: 1 MSIFSGVNASASALTAQRLRMDVVSSNLANMDTT--RAKQVDGNWEPYRRKLVTLQPSGE 58
Query: 61 HLKESDSSGLHWNAHVI-----------EAPLD---QTTGVQVSGN------TVGITNEL 100
+S ++ + + E P + T + N V E+
Sbjct: 59 SFSSILNSSMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEM 118
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM+M +
Sbjct: 119 VDLISSSRSYEANVTALNANKSMLMKAL 146
>gi|157959900|ref|YP_001499934.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
700345]
gi|157844900|gb|ABV85399.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
700345]
Length = 261
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 51 NFLMARTHETHL-KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
N ++L +E+ +SG + L Q + G V + E+ + +
Sbjct: 180 NPAGLEARGSNLYRETGASGAAIEGIAGDEALGQVRQGALEGANVNVVEEMVEMISTQRA 239
Query: 110 YELNTKLIKKLNSMVM 125
YE+N K++ + M+
Sbjct: 240 YEMNAKVVSASDDMLK 255
>gi|114799186|ref|YP_758987.1| flagellar basal body rod protein FlgG [Hyphomonas neptunium ATCC
15444]
gi|114739360|gb|ABI77485.1| flagellar basal-body rod protein FlgG [Hyphomonas neptunium ATCC
15444]
Length = 261
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
QIA+ R +++S NIAN ST YR + + F ++ Q +L T + +
Sbjct: 4 LQIAASGMAAQQMRVEVISNNIANMSTTAYRPRT-AEFSDLMYQQYLTPGTITSQVGTVV 62
Query: 67 SSGLHWNAHVIEA 79
SG+ + V
Sbjct: 63 PSGIQLGSGVRPT 75
>gi|289612840|emb|CBI60006.1| unnamed protein product [Sordaria macrospora]
Length = 135
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH 58
M A+ R + + NIAN +TP Y+ + I +T+ ++ + T
Sbjct: 1 MGMTGLVDSATAVMRMAQARLDVAAHNIANVATPGYKRR-IGFADTVAARSEVALATR 57
>gi|251772446|gb|EES53013.1| flagellar basal-body rod protein FlgC [Leptospirillum
ferrodiazotrophum]
Length = 145
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 39/137 (28%), Gaps = 15/137 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PN--YRAKDI--------SSFET 46
M +I++ R +++ N+ANA PN Y +D+ SF
Sbjct: 1 MGFSDAMRISASGLEAERVRLNVLAGNLANADATRGNPNGTYERRDVIFAAVAPGRSFSD 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHI 106
ILN L + P G + N V E+
Sbjct: 61 ILNSPQESPVKEVRVLGMVRDPRPLVRVYDPNNPDADRDGYVMHPN-VSKLEEMTNLIDA 119
Query: 107 KYLYELNTKLIKKLNSM 123
YE N + M
Sbjct: 120 SRAYEANLTAMDTTKRM 136
>gi|148240969|ref|YP_001220470.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
sp. BTAi1]
gi|146411345|gb|ABQ39798.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
sp. BTAi1]
Length = 244
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I L R V+ N+ANA T +RA+ + SF+ L+ E
Sbjct: 7 IHLSRLIALERRLDNVANNVANADTTGFRARQL-SFQEYLSP------AKEGEANGKRER 59
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGN 92
+ ++ P +Q++GN
Sbjct: 60 PVSLVNAGLQYPDSAGGAIQLTGN 83
>gi|254504860|ref|ZP_05117011.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
gi|222440931|gb|EEE47610.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
Length = 138
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 2 QPIT-FFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFL 53
P++ QIA+ S+R +IVSEN+ANA + YR K I+ FE+ N+
Sbjct: 3 DPLSATLQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTIT-FESEFNRVTQ 61
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ +D + D V++ V EL YE N
Sbjct: 62 ANLVAVKGI-GTDKAPFTVEYDPGHPAADVDGYVKMP--NVNTLMELADMRETNRTYEAN 118
Query: 114 TKLIKKLNSMVM 125
K++ + MVM
Sbjct: 119 LKVMTQAREMVM 130
>gi|258592507|emb|CBE68816.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
[NC10 bacterium 'Dutch sediment']
Length = 140
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 41/123 (33%), Gaps = 16/123 (13%)
Query: 19 ERQKIVSENIANAS---TP---NYRAKDI-------SSFETILNQNFLMARTHETHLKES 65
R +++EN+ANA TP YR K + S+FE +LN + ES
Sbjct: 17 VRMNLIAENLANAEVTRTPIGGPYRRKGVVLGTRGTSAFEGLLNAGAAPGGVEVLKIVES 76
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ + N V E+ YE N I+ SM+
Sbjct: 77 QAPPNLVYNPSHPDADTAGYVAMPNINPV---MEMVDLMSASRAYEANISAIQIAKSMMT 133
Query: 126 HVV 128
+
Sbjct: 134 KTL 136
>gi|22127325|ref|NP_670748.1| flagellar basal body rod protein FlgG [Yersinia pestis KIM 10]
gi|45442798|ref|NP_994337.1| flagellar basal body rod protein FlgG [Yersinia pestis biovar
Microtus str. 91001]
gi|51597635|ref|YP_071826.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
IP 32953]
gi|108809053|ref|YP_652969.1| flagellar basal body rod protein FlgG [Yersinia pestis Antiqua]
gi|108810750|ref|YP_646517.1| flagellar basal body rod protein FlgG [Yersinia pestis Nepal516]
gi|145597819|ref|YP_001161895.1| flagellar basal body rod protein FlgG [Yersinia pestis Pestoides F]
gi|150260247|ref|ZP_01916975.1| lateral flagellar basal body rod protein [Yersinia pestis
CA88-4125]
gi|153947407|ref|YP_001399636.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
IP 31758]
gi|162421910|ref|YP_001604845.1| flagellar basal body rod protein FlgG [Yersinia pestis Angola]
gi|165925150|ref|ZP_02220982.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939077|ref|ZP_02227629.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008679|ref|ZP_02229577.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166212222|ref|ZP_02238257.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399088|ref|ZP_02304612.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419078|ref|ZP_02310831.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425222|ref|ZP_02316975.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167466335|ref|ZP_02331039.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
gi|186896769|ref|YP_001873881.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
PB1/+]
gi|218927914|ref|YP_002345789.1| flagellar basal body rod protein FlgG [Yersinia pestis CO92]
gi|229837410|ref|ZP_04457573.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
gi|229840625|ref|ZP_04460784.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842824|ref|ZP_04462976.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900947|ref|ZP_04516071.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
gi|270487670|ref|ZP_06204744.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
gi|294502791|ref|YP_003566853.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
gi|21960406|gb|AAM86999.1|AE013948_7 flagellar biosynthesis protein, cell-distal portion of basal-body
rod [Yersinia pestis KIM 10]
gi|45437664|gb|AAS63214.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Microtus str. 91001]
gi|51590917|emb|CAH22573.1| putative flagellar basal-body rod protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774398|gb|ABG16917.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
gi|108780966|gb|ABG15024.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
gi|115346525|emb|CAL19402.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
gi|145209515|gb|ABP38922.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
gi|149289655|gb|EDM39732.1| lateral flagellar basal body rod protein [Yersinia pestis
CA88-4125]
gi|152958902|gb|ABS46363.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
IP 31758]
gi|162354725|gb|ABX88673.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
gi|165913033|gb|EDR31658.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923350|gb|EDR40501.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992018|gb|EDR44319.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166206968|gb|EDR51448.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166963072|gb|EDR59093.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051592|gb|EDR63000.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055985|gb|EDR65766.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|186699795|gb|ACC90424.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
PB1/+]
gi|229682286|gb|EEO78378.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
gi|229690091|gb|EEO82148.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696991|gb|EEO87038.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705533|gb|EEO91543.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
gi|262360823|gb|ACY57544.1| putative flagellar basal-body rod protein [Yersinia pestis D106004]
gi|262364768|gb|ACY61325.1| putative flagellar basal-body rod protein [Yersinia pestis D182038]
gi|270336174|gb|EFA46951.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
gi|294353250|gb|ADE63591.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
gi|320016709|gb|ADW00281.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 261
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG E Q + G+ V + E+ ++ YE+N K++ +
Sbjct: 192 YRETAASGEAVEGVPGEEAFGQLEQGALEGSNVQVVEEMVDMITVQRAYEMNAKMVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVSQ 259
>gi|284041507|ref|YP_003391847.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
14684]
gi|283945728|gb|ADB48472.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
14684]
Length = 149
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M IA R + +EN+ANA T Y+ K++ ++ + M
Sbjct: 1 MGLFDAIDIAGSGLTAERLRMDVTAENLANAQTTRAADGGPYQRKEVVLQQSGGSSFSTM 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------------TVGITNELYK 102
++ S++S A ++E Q G+ V E+
Sbjct: 61 LTGAIGGVRASEASKGVEVAGIVEDQTAQRQVYDP-GHPDADPRGYVAMPNVNPVTEMVD 119
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M +
Sbjct: 120 LISSSRSYEANVTAMQSAKQMFTKTL 145
>gi|300024616|ref|YP_003757227.1| flagellar basal-body rod protein FlgF [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526437|gb|ADJ24906.1| flagellar basal-body rod protein FlgF [Hyphomicrobium
denitrificans ATCC 51888]
Length = 240
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
L R V+ N+ANA T YRA+ + SFE +L+++ A +
Sbjct: 15 LQRRLDTVANNVANAGTAGYRAEQM-SFEEVLSKSGQTAVS 54
>gi|260886629|ref|ZP_05897892.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
35185]
gi|330839539|ref|YP_004414119.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
35185]
gi|260863772|gb|EEX78272.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
35185]
gi|329747303|gb|AEC00660.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
35185]
Length = 147
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 35/124 (28%), Gaps = 15/124 (12%)
Query: 20 RQKIVSENIANASTPN-------------YRAKD--ISSFETILNQNFLMARTHETHLKE 64
R ++S NIANA+T ++ ++ F + L Q + +
Sbjct: 20 RMDVISNNIANANTTRSVEGGPYHRRYVVFQPRERGKEDFASTLRQKLDNQAGNGVRAMK 79
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ D V + I E+ YE N I M
Sbjct: 80 IEEDRSQGPLVYDPGHPDANADGYVERPNINIVQEMVDMITASRAYEANVTAINAAKGMA 139
Query: 125 MHVV 128
+ +
Sbjct: 140 QNAL 143
>gi|253682065|ref|ZP_04862862.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
1873]
gi|253561777|gb|EES91229.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
1873]
Length = 145
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 21/145 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN--------YRAKDISSFETILNQNF 52
M + +I++ + R +S NI N T YR + I+ F+ L +
Sbjct: 1 MNAFSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGNKEPYR-RKIAVFQENLKKEL 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-----SGN----TVGITNELYKS 103
+ + S + ++PL + G V I NE+
Sbjct: 60 SK---DKKGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADM 116
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N I SM M +
Sbjct: 117 IAATRAYEANVTAINSSKSMFMKAL 141
>gi|319405396|emb|CBI79015.1| Flagellar basal-body rod protein flgF [Bartonella sp. AR 15-3]
Length = 244
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 17 LSERQKIVSENIANASTPNYRA 38
L R + +++N+AN +TP +RA
Sbjct: 15 LERRMETIAQNMANVNTPGFRA 36
>gi|258511369|ref|YP_003184803.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478095|gb|ACV58414.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 144
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 12/119 (10%)
Query: 22 KIVSENIANASTPN------YRAK--DISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+++ NIAN +T YRA+ + + E ++ + + + + + + +
Sbjct: 22 NVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALGQAVQGIGGGVEVTSITQD 81
Query: 74 AHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ D + V+G + V +T ++ Y+ N M + +
Sbjct: 82 TSPFQLIYDPSNPDAVNGYVETSNVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 140
>gi|168185307|ref|ZP_02619971.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
gi|182671644|gb|EDT83605.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
Length = 69
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRA 38
+ + N S R K++S NIAN +TP+Y++
Sbjct: 14 DLLKKSMNASSYRGKVISNNIANYNTPDYKS 44
>gi|16125206|ref|NP_419770.1| flagellar basal body rod protein FlgC [Caulobacter crescentus CB15]
gi|221233942|ref|YP_002516378.1| flagellar basal body rod protein FlgC [Caulobacter crescentus
NA1000]
gi|13422230|gb|AAK22938.1| flagellar basal-body rod protein FlgC [Caulobacter crescentus CB15]
gi|220963114|gb|ACL94470.1| flagellar basal-body rod protein flgC [Caulobacter crescentus
NA1000]
Length = 139
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 13/129 (10%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLM 54
Q + +AS R ++++ENIANA T YR + + F+ Q
Sbjct: 7 QSLATMAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYR-RQVPVFKPTTVQGGEG 65
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ +S + + A + + NT+ E + YE N
Sbjct: 66 VQMLRVDPDQSAFKTEYDPGNP--AADAKGYVKLPNVNTMV---ESLDMKEAQRAYEANL 120
Query: 115 KLIKKLNSM 123
+I+ SM
Sbjct: 121 NVIETARSM 129
>gi|121601652|ref|YP_989405.1| putative flagellar basal-body rod protein FlgF [Bartonella
bacilliformis KC583]
gi|120613829|gb|ABM44430.1| putative flagellar basal-body rod protein FlgF [Bartonella
bacilliformis KC583]
Length = 244
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
L+ R + +++N+AN +TP +RA + F+T+++ E + +S
Sbjct: 15 LARRMETIAQNMANVNTPGFRAGGMK-FDTLVSPI-----AQEQGDRVFFTSAGKGYIST 68
Query: 77 IEAPLDQTT---GVQVSGNT 93
L+QT V +GN+
Sbjct: 69 ERGSLEQTGNALDVAATGNS 88
>gi|306841051|ref|ZP_07473775.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
gi|306288940|gb|EFM60240.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
Length = 107
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Query: 31 ASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
A YR K + SF T L Q A + D+S D V+
Sbjct: 8 ADADPYRRKTV-SFRTELEQGTGAAEVRVAEV-GKDTSPFIEQYDPSHPAADARGYVKYP 65
Query: 91 GNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V + E+ YE N +++++ ++ +
Sbjct: 66 --NVNMVVEMADMREANRSYEANLQVVRQARELISMTI 101
>gi|238762361|ref|ZP_04623332.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
33638]
gi|238699346|gb|EEP92092.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
33638]
Length = 141
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--LMARTH 58
M ++I+ + R ++ N+ANA +P A + + + + +
Sbjct: 1 MSFNNIYRISGSAMTAQTIRLNTIASNLANADSPAASAAEAYKARSPIFSAVYSPRSAAN 60
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYLYEL 112
+ + L + + V + +E+ +E
Sbjct: 61 PRGVNGAQVQVLDVVEVRETVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFET 120
Query: 113 NTKLIKKLNSMVMHVVR 129
N +++ + SM V++
Sbjct: 121 NVEVLNSVKSMQQSVLK 137
>gi|319403955|emb|CBI77543.1| Flagellar basal-body rod protein flgF [Bartonella rochalimae ATCC
BAA-1498]
gi|319406971|emb|CBI80608.1| Flagellar basal-body rod protein flgF [Bartonella sp. 1-1C]
Length = 244
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILN 49
L R + +++N+AN +TP ++A + F+T+L+
Sbjct: 15 LERRMETIAQNMANVNTPGFQAGGMK-FDTLLS 46
>gi|332162899|ref|YP_004299476.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604254|emb|CBY25752.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325667129|gb|ADZ43773.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863349|emb|CBX73472.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
W22703]
Length = 261
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
KE+ +SG E Q + G+ V + E+ ++ YE+N K++ +
Sbjct: 192 YKETVASGAAVEGVAGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVTQ 259
>gi|163789652|ref|ZP_02184090.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
gi|159875184|gb|EDP69250.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
Length = 145
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 18/144 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------YRAKDISSFETILNQNFL 53
M QI + + + +S NIAN +T Y K++ FE L Q
Sbjct: 1 MSIFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVV-FEESLKQVET 59
Query: 54 MARTHETHLKES--------DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
T ++ + ++ VQ S V + +E+
Sbjct: 60 SLNGQGTEKSFGVKPTEIRENTDDIVMEYDPTHPDANEEGYVQQS--NVNMADEMIDMMT 117
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
Y+ N + M+ ++
Sbjct: 118 TLRTYDANVTAMNASKEMLSKALQ 141
>gi|288940411|ref|YP_003442651.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
180]
gi|288895783|gb|ADC61619.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
180]
Length = 263
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN---QNFLMARTHETHLKES 65
IA + R +VS N+AN +T ++ K + FE ++ + T ET L
Sbjct: 7 IAKTGLDAQQTRMSVVSNNLANVNTTGFK-KGRAVFEDLIYHSCRQHGAQATQETQLPSG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ G + Q +Q GN++ + E
Sbjct: 66 LTIGTGVRTVATQKLFAQGNYIQT-GNSLDMAIE 98
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG ++ E + + V + EL + YE+N+K I +
Sbjct: 192 FRETTASGAPQQSNPGENGFGSLVQCSLETSNVNMAEELVNMIETQRAYEVNSKAISAAD 251
Query: 122 SMVMHV 127
SM+ V
Sbjct: 252 SMLQFV 257
>gi|317178281|dbj|BAJ56070.1| flagellar basal body rod protein FlgC [Helicobacter pylori F16]
Length = 161
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIANA+T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 MARTHETHLKESDSSGLHWNAHVIEA-----------PLDQTTGVQVSGN--------TV 94
+ D + + PL + N V
Sbjct: 63 QNHQITPYEDPLDEGDDNPLIPITSVMVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVVAFQSAKNMAQNAI 156
>gi|304392493|ref|ZP_07374433.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
gi|303295123|gb|EFL89483.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
Length = 423
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + S R V++N+AN T Y+ K + F ++
Sbjct: 1 MSLYGMMRTSVSGMQAQSNRLSTVADNVANVDTTGYK-KYSTEFAQLVRPGASSGVDSSL 59
Query: 61 HLKESDSSGL-HWNAHVIEAPLDQTTGVQVSGN 92
+ H + + +T + ++GN
Sbjct: 60 GSGGVLTDARQHISQQGNVSYTQSSTDIAINGN 92
>gi|251780808|ref|ZP_04823728.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243085123|gb|EES51013.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 135
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN------ASTPNYRAKDISSFETILNQNFLM 54
M T QI++ + R ++ N+ N A + I+ F+ L++N M
Sbjct: 1 MNAFTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKM 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + E D S + D+T V + V + NE+ YE N
Sbjct: 61 AGIKPVKIVE-DKSPFRRVYKPTDPDADETGYVTMP--NVNVLNEMADMMVSTRSYEANV 117
Query: 115 KLIKKLNSMVMHVV 128
+ + L M +
Sbjct: 118 ETLNALKGMFSKAL 131
>gi|238752865|ref|ZP_04614330.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
43380]
gi|238708904|gb|EEQ01157.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
43380]
Length = 261
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
KE+ +SG E Q + G+ V + E+ ++ YE+N K++ +
Sbjct: 192 YKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVTQ 259
>gi|218528727|ref|YP_002419543.1| flagellar hook protein FlgE [Methylobacterium chloromethanicum
CM4]
gi|218521030|gb|ACK81615.1| flagellar basal body FlaE domain protein [Methylobacterium
chloromethanicum CM4]
Length = 403
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + N S R V+ENI NAST Y+ + + F ++L + + +
Sbjct: 1 MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYK-RTSAEFSSLLLDSGDVGNYNSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ + + + D+ +Q +G
Sbjct: 60 AVETTLRRSVSEGGPIASTNSDKDLAIQGNG 90
>gi|89098646|ref|ZP_01171528.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
gi|89086608|gb|EAR65727.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
Length = 149
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS-TPN---------YRAKDI------SSF 44
M S R ++S N+AN T Y K++ +F
Sbjct: 1 MSMFHSMNTTSSALTAQRLRMDVISSNMANVDSTRGKLVNGEWQPYTRKEVVMQPQEKNF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELYK 102
+ LN A + + ++ S+ ++ P D V V E+
Sbjct: 61 SSFLNTAMN-AGSAGSGVRVSEIREDQTPFKLVYDPSHPDANEAGYVQMPNVDPLREMVD 119
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM+M +
Sbjct: 120 LISATRSYEANVTVFNASKSMMMKAL 145
>gi|149189834|ref|ZP_01868114.1| flagellar basal body rod protein [Vibrio shilonii AK1]
gi|148836320|gb|EDL53277.1| flagellar basal body rod protein [Vibrio shilonii AK1]
Length = 144
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 14/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + IA + R V+ N+ANA P+ K + F T+ +Q L A
Sbjct: 1 MSFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSQTQLAA 60
Query: 56 RTH---ETHLKESDSSGLHWNAHVIEAP----LDQTTGVQVSGNTVGITNELYKSGHIKY 108
+ ++ D A P ++ V G V + E+
Sbjct: 61 GQNVYPNAEVRIVDVVQSDAKADQRFEPNNPLANEEGYVYYPG--VDVVAEMADMMSATR 118
Query: 109 LYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM ++R
Sbjct: 119 SFETNVEVLANVKSMQQGLLR 139
>gi|332981440|ref|YP_004462881.1| flagellar hook-basal body protein [Mahella australiensis 50-1
BON]
gi|332699118|gb|AEE96059.1| flagellar hook-basal body protein [Mahella australiensis 50-1
BON]
Length = 265
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF-------LMARTHETHLKE 64
R ++ NIAN +T +++ ++ F+ + NQ ++ T+ +
Sbjct: 10 SGLRAHQTRMDVIGNNIANVNTVGFKSSRVT-FQDVFNQTIKTGSAPNVLGGTNPQQIGL 68
Query: 65 SDSSGL----HWNAHVIEAPLDQTTGVQVSG 91
+ G H + + G
Sbjct: 69 GAAVGAIDVLHTPGGIERTDNPLDLAINGDG 99
>gi|323490137|ref|ZP_08095357.1| flagellar hook-basal body protein [Planococcus donghaensis
MPA1U2]
gi|323396185|gb|EGA89011.1| flagellar hook-basal body protein [Planococcus donghaensis
MPA1U2]
Length = 280
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
AS + L ++ ++ NIAN +T Y+ ++ +SF L + + +
Sbjct: 6 NTASNTMSELQKKLDLIGNNIANVNTNGYKRQE-ASFSDALVLSLEKQVGQKNEVGRITP 64
Query: 68 SGLHWNAHVI 77
+GL A I
Sbjct: 65 NGLRIGAGAI 74
>gi|188590422|ref|YP_001920200.1| flagellar basal body rod protein FlgC [Clostridium botulinum E3
str. Alaska E43]
gi|188500703|gb|ACD53839.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E3
str. Alaska E43]
Length = 135
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M T QI++ + R ++ N+ NAST + I+ F+ L++N M
Sbjct: 1 MNAFTSMQISATGISAERLRMDTITSNMTNASTTRSADGSGPYVRKIAVFQEALDENRKM 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + E S + + V + NE+ YE N
Sbjct: 61 AGIKPAKIVEDKSPLRKVYNPTHPDADETGYVTMPN---VNVLNEMADMMVSTRSYEANV 117
Query: 115 KLIKKLNSMVMHVV 128
+ + L M +
Sbjct: 118 ETLNALKGMFSKAL 131
>gi|312884836|ref|ZP_07744528.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367488|gb|EFP95048.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 145
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 10/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M + IA N S R V+ N+ANA + A D F T+ N+ L
Sbjct: 1 MSFTDIYSIAGSAMNAQSVRLNTVASNLANADAVSANADDAYKALKPVFATVYNKTQLSV 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLY 110
+ E + ++ E + + + V + E+ +
Sbjct: 61 SDNAYPNAEVRIVDVVQSSKQAEKRFEPSNPLANDEGYVYYPDIDVVAEMADMMSATRSF 120
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N ++ + SM +++
Sbjct: 121 ETNVAVLGNVKSMQQGLLK 139
>gi|289523576|ref|ZP_06440430.1| flagellar basal-body rod protein FlgC [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503268|gb|EFD24432.1| flagellar basal-body rod protein FlgC [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 136
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M+ +IA ++S+N+AN +T YR + + F L
Sbjct: 1 MRLFDSLEIAGSSLTAHRLWMDLISQNLANVNTTRTQDGGPYR-RKVPIFAERLEAAEKG 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A+ E D D+ V V + E+ YE N
Sbjct: 60 AKGVRVEKIEEDDLPPRMVYQPEHPDADEEGYVAYP--NVNVVREMTDMMAATRAYEANL 117
Query: 115 KLIKKLNSMVMHVV 128
+++ + +
Sbjct: 118 MVVESAKEIWGSAI 131
>gi|212637787|ref|YP_002314312.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
gi|212559271|gb|ACJ31725.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
Length = 261
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG + L Q + G V + E+ + + YE+N K++ +
Sbjct: 192 YRETGASGAAIEGVAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251
Query: 122 SMVM 125
M+
Sbjct: 252 DMLK 255
>gi|299534789|ref|ZP_07048119.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
ZC1]
gi|298729877|gb|EFI70422.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
ZC1]
Length = 153
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 28/151 (18%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPNYRAKDIS-SFETILNQNFLMARTHE 59
++ F + A+ L+ R ++S N+AN T RA+ ++ +E ++ ++
Sbjct: 1 MSIFHGMNTTASALTAQRLRMDVISSNMANMDTT--RARQVNGEWEPYRRKSVTLSAQEG 58
Query: 60 T-------HLKESDSSGLHWNAHVIEAPLDQTTGVQ-------VSGN--------TVGIT 97
L ++ SG+ + DQ T + N V
Sbjct: 59 QFSNFLNVALGKNAKSGVGNGVKITRISEDQETPFKLVYDPTHPDANADGYVNMPNVDPL 118
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N + SM+ +
Sbjct: 119 KEMVDLMSATRSYEANITVFNANKSMLTKAL 149
>gi|238762358|ref|ZP_04623329.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
ATCC 33638]
gi|238699343|gb|EEP92089.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
ATCC 33638]
Length = 261
Score = 38.4 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
KE+ +SG E Q + G+ V + E+ ++ YE+N K++ +
Sbjct: 192 YKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVTQ 259
>gi|212640498|ref|YP_002317018.1| flagellar hook-basal body protein [Anoxybacillus flavithermus
WK1]
gi|212561978|gb|ACJ35033.1| Flagellar hook-basal body protein [Anoxybacillus flavithermus
WK1]
Length = 274
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ N L ++ ++S NIAN +T ++ +D + F +L Q F T + + + +
Sbjct: 7 TAANTMNQLQQQLDVISHNIANVNTTGFKKRD-AVFGELLAQQFTNLPTTDEAPRLTPAG 65
>gi|188579925|ref|YP_001923370.1| flagellar hook protein FlgE [Methylobacterium populi BJ001]
gi|179343423|gb|ACB78835.1| flagellar basal body FlaE domain protein [Methylobacterium populi
BJ001]
Length = 402
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + N S R V+ENI NAST Y+ + + F ++L + + +
Sbjct: 1 MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYK-RTSAEFSSLLLDSGDVGNYNSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ + + + D+ +Q +G
Sbjct: 60 AVETTLRRSVSEGGPIASTNSDKDLAIQGNG 90
>gi|56460254|ref|YP_155535.1| flagellar basal body rod protein [Idiomarina loihiensis L2TR]
gi|56179264|gb|AAV81986.1| Flagellar basal body rod protein [Idiomarina loihiensis L2TR]
Length = 150
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 44/146 (30%), Gaps = 17/146 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M F + + S R + N+ANA++ YRA++ + + +
Sbjct: 1 MSLFNIFNVTGSAMSAQSVRLNTTASNLANANSISSSIDETYRARNPVFATALADASGNY 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS-----------GNTVGITNELYKS 103
T+ ++ ++E+ + V E+
Sbjct: 61 KGNSLTNQTQAGQEAGVKVMGIVESQDPLQIEYAPNHPMADESGYIYRPNVNTMEEMANM 120
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
Y+ N ++ +M ++R
Sbjct: 121 ISASRSYQTNVQVADTAKTMTQRLLR 146
>gi|284041497|ref|YP_003391837.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
gi|283945718|gb|ADB48462.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
Length = 232
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMART-----HETH 61
IA+ RQ ++ ++ANASTP Y+A I+ SF +L N + +
Sbjct: 7 IAASGMIAEQMRQDAIANDLANASTPGYKADRITQASFGDLLLSNSNTGQVIGPLGTGAY 66
Query: 62 LKESDSSGLHWNAHVIEAPLD 82
+ V E PLD
Sbjct: 67 ADSKVTDLRPQATRVTEEPLD 87
>gi|237753202|ref|ZP_04583682.1| flagellar basal-body rod protein flgc proximal rod protein
[Helicobacter winghamensis ATCC BAA-430]
gi|229375469|gb|EEO25560.1| flagellar basal-body rod protein flgc proximal rod protein
[Helicobacter winghamensis ATCC BAA-430]
Length = 166
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 40/162 (24%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQN-- 51
++ F I+ + +R ++S NIANA+T YR +++ F+ +LNQ
Sbjct: 3 LSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGGPYRRRELVLKAFDFDKVLNQKYE 62
Query: 52 ------------------FLMARTHETHLK-------ESDSSGLHWNAHVIEAPLDQTTG 86
+ + D+ +
Sbjct: 63 KSNNLLEYEDPLNEMDSFDEQRKPKPALMSVYVDKIVRDDTQPRMKYEPSHPDANSEGYV 122
Query: 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ N V E+ Y+ N + + +M +
Sbjct: 123 AYPNINPVV---EMADLIEASKAYQANVAVFQSAKNMASTAI 161
>gi|171321209|ref|ZP_02910179.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
MEX-5]
gi|171093519|gb|EDT38689.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
MEX-5]
Length = 149
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 44/142 (30%), Gaps = 20/142 (14%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANA---STPN---YRAKDISS-------FETILNQN 51
T F IA + +R ++++ N ANA + P YR + S F L +
Sbjct: 4 TIFAIARSGLDVERQRLELIARNFANAGASTAPGAEPYRPLRLVSGAQLEPAFPEALRRA 63
Query: 52 FLMART-HETHLKESDSSGLHWNAHVIEAP----LDQTTGVQVSGNTVGITNELYKSGHI 106
T + L V+ D V+ G + E+
Sbjct: 64 PGGISTDRPLGTRAIGIDALDTPPRVMRDTAHPHADAQGLVRYPG--LDHAAEMALLVQT 121
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 122 LRTYEANVVMFNAARSMYLRAL 143
>gi|240137257|ref|YP_002961726.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
gi|240007223|gb|ACS38449.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
Length = 403
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + N S R V+ENI NAST Y+ + + F ++L + + +
Sbjct: 1 MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYK-RTSAEFSSLLLDSGDVGNYNSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ + + + D+ +Q +G
Sbjct: 60 AVETTLRRSVSEGGPIASTNSDKDLAIQGNG 90
>gi|299822273|ref|ZP_07054159.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
gi|299815802|gb|EFI83040.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
Length = 411
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD-- 66
A N + + S NIANA+T Y+ + + F +L QN L + T + +
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKRQSVV-FNDLLYQNTLGSVTSGLYAGTNPMS 65
Query: 67 -SSGLHWNAHVIEAPLDQTTGVQVS 90
SG A + + T +
Sbjct: 66 FGSGTKIGAVITDYTAGSPTATGRN 90
>gi|292670487|ref|ZP_06603913.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
43541]
gi|292647897|gb|EFF65869.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
43541]
Length = 506
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
++ NIAN +T ++A ++ FE +L+Q A + T + ++ + V
Sbjct: 1 MDVIGNNIANVNTTGFKAGRVT-FEDMLSQTLSGAASPGTTIGGTNPKQVGLGVSV 55
>gi|163850123|ref|YP_001638166.1| flagellar hook protein FlgE [Methylobacterium extorquens PA1]
gi|163661728|gb|ABY29095.1| protein of unknown function DUF1078 domain protein
[Methylobacterium extorquens PA1]
Length = 403
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + N S R V+ENI NAST Y+ + + F ++L + + +
Sbjct: 1 MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYK-RTSAEFSSLLLDSGDVGNYNSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ + + + D+ +Q +G
Sbjct: 60 AVETTLRRSVSEGGPIASTNSDKDLAIQGNG 90
>gi|319650828|ref|ZP_08004965.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
gi|317397426|gb|EFV78127.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
Length = 279
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMAR 56
F A+ R ++++ N+ANA+TP ++A + +F +L Q
Sbjct: 5 FYTAASGMLAQQRRTEVLTNNMANANTPGFKADQTSLRAFPEMLLQRIGQKT 56
>gi|260767921|ref|ZP_05876855.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
gi|260615951|gb|EEX41136.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
gi|315179624|gb|ADT86538.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
Length = 144
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + IA + R V+ N+ANA P+ + + F T+ N++ L
Sbjct: 1 MPFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANPDDAYRALKPVFATVYNKSQLAT 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKYL 109
+ E + +A E + G+ + + E+
Sbjct: 61 GDNVYPSAEVRIVDVVQSAGQAEKRFE-PHNPLADGDGYVYYPDIDVVAEMADMMSATRS 119
Query: 110 YELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM +++
Sbjct: 120 FETNVEVLSNVKSMQQGLLK 139
>gi|253998488|ref|YP_003050551.1| flagellar hook protein FlgE [Methylovorus sp. SIP3-4]
gi|253985167|gb|ACT50024.1| flagellar basal body FlaE domain protein [Methylovorus sp.
SIP3-4]
Length = 402
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ N+ANA+T ++ + + F + + T +
Sbjct: 3 FQQGLSGLNAASKSLDVIGNNVANANTVGFK-QSRAEFADVYANALNGSGTGSAGIGVKV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ + + ++GN
Sbjct: 62 ADIQRQFTQGNITNTENPLDIAINGN 87
>gi|257876010|ref|ZP_05655663.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
EC20]
gi|257810176|gb|EEV38996.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
EC20]
Length = 260
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
M I+ N L + NIAN +T Y+A+ + F+ ++ T
Sbjct: 1 MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQT-THFQALMENAIGAEET 56
>gi|257871308|ref|ZP_05650961.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum
EG2]
gi|257805472|gb|EEV34294.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum
EG2]
Length = 260
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
M I+ N L + NIAN +T Y+A+ + F+ ++ T
Sbjct: 1 MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQT-THFQALMENAIGAEET 56
>gi|95929847|ref|ZP_01312588.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
DSM 684]
gi|95134143|gb|EAT15801.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
DSM 684]
Length = 143
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 39/139 (28%), Gaps = 11/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M T I+S R +S N+ANA T YR K + ++ +
Sbjct: 1 MDIFTSLNISSSALKAQRIRLDTISSNMANAETTRTPEGGPYRRKMVVFEPAQVSFADHL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYL 109
+ + L S + D + V + E
Sbjct: 61 SAKEKKALNGVQVSQIVTEDSEPRLIFDPSHPDANDQGYVALPNIDLLKETTDMMLATRA 120
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE N IK M + +
Sbjct: 121 YEANITTIKSAKRMALKAL 139
>gi|258625236|ref|ZP_05720148.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
gi|258582483|gb|EEW07320.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
Length = 144
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M + IA + R V+ N+ANA Y+A F T+ N+ +
Sbjct: 1 MSFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALK-PVFATVYNKTQMA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYL 109
A E + NA E + + V + E+
Sbjct: 60 ASDSAYPSAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRS 119
Query: 110 YELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM +++
Sbjct: 120 FETNVEMLSNVKSMQQGLLK 139
>gi|84514831|ref|ZP_01002194.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
gi|84510990|gb|EAQ07444.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
Length = 261
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETHLKES 65
+A N R ++++ N+AN +T +++ D +FE++L ++ + T L +
Sbjct: 7 VAKTGLNAQQTRMQVIANNLANLNTVGFKS-DRVNFESLLYQVKRSGGDQTSEGTALTSA 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ G A + Q V N+ + E
Sbjct: 66 LALGTGVRAVNTQKLYTQGGMVNTD-NSFDLAIE 98
>gi|292492361|ref|YP_003527800.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
Nc4]
gi|291580956|gb|ADE15413.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
Nc4]
Length = 137
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 9/136 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQ-NFL 53
M I+ + + R + N+ANA + + YRA+ F T+LN N
Sbjct: 1 MSLFNIIDISGTAMSAQTLRLNTTASNLANADSVSSSVNQTYRARH-PVFATVLNDFNQE 59
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
A L +S + + P+ G N V E+ Y+ +
Sbjct: 60 EATGGVQVLGVVESKAPLQQEYAPDHPMANEAGYIFHPN-VNPIEEMANMISASRSYQNS 118
Query: 114 TKLIKKLNSMVMHVVR 129
++ +++ ++
Sbjct: 119 VEVANTSKQLLLRTLQ 134
>gi|313200563|ref|YP_004039221.1| flagellar basal body flae domain-containing protein [Methylovorus
sp. MP688]
gi|312439879|gb|ADQ83985.1| flagellar basal body FlaE domain protein [Methylovorus sp. MP688]
Length = 402
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ N+ANA+T ++ + + F + + T +
Sbjct: 3 FQQGLSGLNAASKSLDVIGNNVANANTVGFK-QSRAEFADVYANALNGSGTGSAGIGVKV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ + + ++GN
Sbjct: 62 ADIQRQFTQGNITNTENPLDIAINGN 87
>gi|254559268|ref|YP_003066363.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
gi|254266546|emb|CAX22310.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
Length = 403
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I + N S R V+ENI NAST Y+ + + F ++L + + +
Sbjct: 1 MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYK-RTSAEFSSLLLDSGDVGNYNSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ + + + D+ +Q +G
Sbjct: 60 AVETTLRRSVSEGGPIASTNSDKDLAIQGNG 90
>gi|157373205|ref|YP_001471805.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
HAW-EB3]
gi|157315579|gb|ABV34677.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
HAW-EB3]
Length = 261
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 27/64 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG + + Q + G V + E+ + + YE+N K++ +
Sbjct: 192 YRETGASGAAIEGVAGDQAIGQLRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251
Query: 122 SMVM 125
M+
Sbjct: 252 DMLK 255
>gi|149908761|ref|ZP_01897422.1| LfgC [Moritella sp. PE36]
gi|149808303|gb|EDM68242.1| LfgC [Moritella sp. PE36]
Length = 140
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 11/138 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKD----ISS-FETILNQNFLMA 55
M ++IA + R V+ N+AN ++ K+ + F TI +
Sbjct: 1 MSFNNIYEIAGSGMRSQTLRLNTVASNLANVNSAASSEKEAYHALKPIFSTIYQTSQETL 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKYLYE 111
+ + P + T G + V E+ +E
Sbjct: 61 EVTGASVNMLGVTRSQQAIERRYEP--ENTLANNDGYVFYSNVNAVAEMADMMSASRSFE 118
Query: 112 LNTKLIKKLNSMVMHVVR 129
+ ++++++NSM ++R
Sbjct: 119 SSAEVMRRVNSMQQSLLR 136
>gi|225569971|ref|ZP_03778996.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
15053]
gi|225161441|gb|EEG74060.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
15053]
Length = 294
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART---HETHLKESD 66
A + ++S NIAN +T Y+++ ++F+ + QN + + + +
Sbjct: 8 AIAGLRSHQSKMDVISNNIANVNTWGYKSRS-ANFQDAMYQNVINSTAGNVNAGGTGGQN 66
Query: 67 SSGLHWNAHVIEAPLDQTTG 86
SS L + +V + TTG
Sbjct: 67 SSQLGYGVNVGSITTNFTTG 86
>gi|160896079|ref|YP_001561661.1| flagellar basal body FlaE domain-containing protein [Delftia
acidovorans SPH-1]
gi|160361663|gb|ABX33276.1| flagellar basal body FlaE domain protein [Delftia acidovorans
SPH-1]
Length = 423
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ NIANA+T +++ + F + A + + +
Sbjct: 3 FQQGLSGLNAASKNLDVIGHNIANANTTGFKSSR-AEFAEAVASAVGSASGQNSGIGVNV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ V ++GN
Sbjct: 62 AAVTQQFRQGPITTTGNNLDVAINGN 87
>gi|78485814|ref|YP_391739.1| flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
XCL-2]
gi|78364100|gb|ABB42065.1| Flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
XCL-2]
Length = 136
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M I++ + + R ++ N+AN + YR+K F+TI++
Sbjct: 1 MSMFPTLDISATGMHAQTVRLNTIASNMANVDSISSNSDETYRSKQ-PVFKTIMDNETGR 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+S + P+ G N V + E+ YE N
Sbjct: 60 PAGGVMVDDIVESKAPLKMEYNPNHPMANAEGYIYRPN-VNVVEEMANMMSASRSYETNI 118
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ ++
Sbjct: 119 EVLNTSKQLLLRTIQ 133
>gi|317130722|ref|YP_004097004.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
2522]
gi|315475670|gb|ADU32273.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
2522]
Length = 279
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISS----FETILNQNF---LMARTHETHLKESD 66
+ + V N+AN +T Y+ +D+S F+ + NQ + RT ++
Sbjct: 15 MGQMQRKLDTVGNNLANLNTTGYKRRDVSFSDLLFQQVNNQRDAHHEIGRTTPNGIRVGS 74
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVS 90
S + A +E +TT ++
Sbjct: 75 GSAVGQTAVRMEQGALRTTERELD 98
>gi|257866397|ref|ZP_05646050.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
EC30]
gi|257873087|ref|ZP_05652740.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
EC10]
gi|257800355|gb|EEV29383.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
EC30]
gi|257807251|gb|EEV36073.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
EC10]
Length = 260
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
M I+ N L + NIAN +T Y+A+ + F+ ++ T
Sbjct: 1 MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQT-THFQALMENAIGAEET 56
>gi|307747446|gb|ADN90716.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni M1]
Length = 164
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIANA+T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K + S + + N
Sbjct: 61 QINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ V
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAV 159
>gi|254516989|ref|ZP_05129047.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
gi|219674494|gb|EED30862.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
Length = 429
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A N + ++S NIAN+ST ++A + F + + L A ++ S
Sbjct: 3 FSTAISGINAATADLGVISNNIANSSTTGFKASR-AEFADVYATSLLGAGSNAIGKGVSL 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ + + + ++GN
Sbjct: 62 AGVTQEFGQGNITFTNNSLDLAINGN 87
>gi|328543156|ref|YP_004303265.1| flagellar basal-body rod FlgG [polymorphum gilvum SL003B-26A1]
gi|326412902|gb|ADZ69965.1| Flagellar basal-body rod FlgG [Polymorphum gilvum SL003B-26A1]
Length = 259
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S N+AN T Y+ + + F+ +L QN T ++
Sbjct: 1 MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQR-ADFQDLLYQNLRRMGTDSSNAG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+G+ + V A +
Sbjct: 60 TIVPTGVQIGSGVKTAATAR 79
>gi|192362305|ref|YP_001982402.1| flagellar basal body rod protein FlgC [Cellvibrio japonicus
Ueda107]
gi|190688470|gb|ACE86148.1| flagellar basal-body rod protein FlgC [Cellvibrio japonicus
Ueda107]
Length = 148
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 48/142 (33%), Gaps = 18/142 (12%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTH 58
T F IA N S R + N+ANA + + YR++ F I Q
Sbjct: 5 TIFDIAGTGMNAQSLRLNTTASNLANAQSASSSVDEVYRSRQ-PVFAAIAQQAMGNLNGA 63
Query: 59 ETHLKESDSSGLHWNAHVIE--APLDQTTGVQV-----SGN----TVGITNELYKSGHIK 107
E D++ ++E APL + G V E+
Sbjct: 64 GYSQNELDANAGVQVLGIVESDAPLQRRYEPGHPKADADGYVFYPNVNPVEEMANMISAS 123
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+++N +++ MV V+
Sbjct: 124 RSFQMNVEVMNSAKQMVQRVLT 145
>gi|296127542|ref|YP_003634794.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
12563]
gi|296019358|gb|ADG72595.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
12563]
Length = 153
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 43/148 (29%), Gaps = 20/148 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKD-----IS 42
M + + R ++++NIAN +T ++ +D S
Sbjct: 1 MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFKPRDDGNKYRS 60
Query: 43 SF--ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
F E + R ++ ++ +A V V E+
Sbjct: 61 PFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEM 120
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I+ +M +
Sbjct: 121 VDMMEASRAYEANSTMIQSAKTMFGSAL 148
>gi|254470342|ref|ZP_05083746.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
gi|211960653|gb|EEA95849.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
Length = 246
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ ++ Q A L +V+ N+AN +T Y+A+ + FE L M T
Sbjct: 1 MENAQLIGLSRQSA--LRRNLDVVANNLANINTTGYKAQRLI-FEEYL-----MPTAQAT 52
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--TVGIT 97
+ D L + V A + +Q++GN V I
Sbjct: 53 EFQRPDR-PLSFTQDVGTATVLTQGSIQLTGNPLDVAIE 90
>gi|326204617|ref|ZP_08194473.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
2782]
gi|325985184|gb|EGD46024.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
2782]
Length = 443
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 13/93 (13%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----------LMARTHETH 61
+ ++ N+AN +T ++A ++ F+ I NQ T+
Sbjct: 10 SGLKAHQAKMDVIGNNVANVNTLGFKAGRVT-FQEIFNQTLRGAGAPDAATARGGTNPMQ 68
Query: 62 LKESDSSGLHWNAHVIEAP--LDQTTGVQVSGN 92
+ + G N +P D T + +SGN
Sbjct: 69 IGLGIAVGSIDNQMTGGSPQRTDNPTDLSISGN 101
>gi|260466625|ref|ZP_05812813.1| flagellar basal-body rod protein FlgF [Mesorhizobium
opportunistum WSM2075]
gi|259029631|gb|EEW30919.1| flagellar basal-body rod protein FlgF [Mesorhizobium
opportunistum WSM2075]
Length = 240
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ + S L R +++N+ANA+T +RA + FE +++ + + + +
Sbjct: 4 SLYVALSAQMA-LERRLDTIADNVANANTVGFRATGVK-FEDVVSGTGQKSVSFASS-GK 60
Query: 65 SDSSGLHWNAHVIEAPLD 82
+ SG H + P D
Sbjct: 61 TYLSGAHGPLNETGNPFD 78
>gi|291613039|ref|YP_003523196.1| flagellar basal-body rod protein FlgF [Sideroxydans
lithotrophicus ES-1]
gi|291583151|gb|ADE10809.1| flagellar basal-body rod protein FlgF [Sideroxydans
lithotrophicus ES-1]
Length = 247
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-LNQNFLMARTHETHLKESDS 67
A A+ ++Q VS+N+AN +TP +RA I +F ++ L L RT +
Sbjct: 7 TAMTGASHTLQQQASVSQNLANINTPGFRAS-IDAFRSVPLVGEGLPTRT----FVVDST 61
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSG 91
+G + VI++ ++ V V G
Sbjct: 62 AGADFTPGVIQS-TGRSLDVAVDG 84
>gi|15616300|ref|NP_244605.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
gi|10176362|dbj|BAB07457.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
Length = 274
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRA 38
A+ +RQ++++ N+AN +TP Y+A
Sbjct: 8 AAAGMITQQQRQEMLTNNLANVNTPGYKA 36
>gi|206896029|ref|YP_002246681.1| flagellar basal-body rod protein FlgC [Coprothermobacter
proteolyticus DSM 5265]
gi|206738646|gb|ACI17724.1| flagellar basal-body rod protein FlgC [Coprothermobacter
proteolyticus DSM 5265]
Length = 134
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP-----NYRAKDISSFETILNQNFLMA 55
M + +IA R ++S NIAN T + I SF++++
Sbjct: 1 MSGFSLLRIAGSALTAQRFRMDVISSNIANLETTRTPEGGPYHRKIVSFQSMMVGENQGQ 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
L E S L ++ +A + + + EL + +E+N+
Sbjct: 61 GVKVAQLTEDPSERLVYDPSHPDADPETGMVHYPD---MDLITELTDLMSAQRSFEMNSN 117
Query: 116 LI 117
I
Sbjct: 118 AI 119
>gi|325567512|ref|ZP_08144179.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
ATCC 12755]
gi|325158945|gb|EGC71091.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
ATCC 12755]
Length = 260
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
M I+ N L + NIAN +T Y+A+ + F+ ++ T
Sbjct: 1 MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQT-THFQALMENAIGAEET 56
>gi|296535149|ref|ZP_06897378.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
gi|296264524|gb|EFH10920.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
Length = 436
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 12/83 (14%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL-- 81
VS N+AN+ T Y+ D + E + + + + + +E PL
Sbjct: 26 VSNNVANSQTTGYKRVDTAFAEQLSQSTARLNGSSTVSAAPVATVSRGGDISQVENPLAL 85
Query: 82 ----------DQTTGVQVSGNTV 94
+ G +GNTV
Sbjct: 86 AISGNGLFAVSRPAGTDANGNTV 108
>gi|90415316|ref|ZP_01223250.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
gamma proteobacterium HTCC2207]
gi|90332639|gb|EAS47809.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
gamma proteobacterium HTCC2207]
Length = 261
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 14/96 (14%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH---------- 58
IA R ++S N+AN +T ++ KD + FE +L QN + A
Sbjct: 7 IAKTGLTAQQTRMSVISNNLANVNTTGFK-KDRAVFEDLLYQNIVPAGGQVDAESETPTG 65
Query: 59 ---ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
T + + LH ++I + G
Sbjct: 66 LMLGTGTRVVATEKLHAQGNIITTENALDLAISGDG 101
>gi|89056684|ref|YP_512135.1| flagellar basal body rod protein FlgG [Jannaschia sp. CCS1]
gi|88866233|gb|ABD57110.1| flagellar basal-body rod protein FlgG [Jannaschia sp. CCS1]
Length = 261
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + R ++S NIAN ST Y + + F + Q + A
Sbjct: 1 MRALDIAATGMSAQQLRVDVISNNIANMSTTGYSPRR-ADFADLHYQQMVRAGAINASDG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG 86
+G+ V A + T
Sbjct: 60 TVVPAGVQIGLGVRPAAVTVTWE 82
>gi|260466619|ref|ZP_05812807.1| flagellar basal-body rod protein FlgG [Mesorhizobium
opportunistum WSM2075]
gi|259029625|gb|EEW30913.1| flagellar basal-body rod protein FlgG [Mesorhizobium
opportunistum WSM2075]
Length = 262
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA----RTHE 59
+ IA+ N ++++ NIAN +T Y+ + + F +L Q R++
Sbjct: 1 MKALAIAATGMNAQQTNLEVIANNIANINTTGYK-RARAEFSDLLYQVDRTQGVPNRSNA 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ + E S GL + Q + +GN+ +
Sbjct: 60 SLVPEGVSIGLGVKTTAVRNVHTQ-GELTSTGNSFDM 95
>gi|281411901|ref|YP_003345980.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
gi|281373004|gb|ADA66566.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
Length = 755
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+V NI+N +T ++A + +FET+L Q R+ + ++ ++ + + V
Sbjct: 19 MDVVGNNISNVNTVGFKASRV-NFETMLAQTIKAGRSSQENVGGTNPMQIGLGSQVS 74
>gi|254458686|ref|ZP_05072110.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
GD 1]
gi|207084452|gb|EDZ61740.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
GD 1]
Length = 163
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 47/162 (29%), Gaps = 37/162 (22%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI------------- 41
M ++ F I+ + R +S+NIANA T YR K++
Sbjct: 1 MSFLSSFDISGYGLSAQRVRVNTISQNIANAQTTRTEEGGPYRRKEVVFKAIDFNEQFNK 60
Query: 42 --------SSFETILNQNFLMARTHETHLKES------DSSGLHWNAHVIEAPLDQTTGV 87
+ FE LN+ + + + D S D V
Sbjct: 61 AIGKMTDSAKFEDPLNEGDFGKKVNPAIMSVIVDKISRDDSEPKMKFDPSHPDADANGYV 120
Query: 88 Q-VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ N V E+ Y+ N + +M +
Sbjct: 121 AYPNINPVI---EMADLVEATRSYQANVAAFESSKNMANSAI 159
>gi|28211309|ref|NP_782253.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
gi|28203749|gb|AAO36190.1| flagellar basal-body rod protein flgG [Clostridium tetani E88]
Length = 285
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+ E+ +S NIAN +T Y+ +D+ SF+ ++N+
Sbjct: 2 LRVLWSGRSAMYAQQEKLDAISNNIANVNTEGYKRQDV-SFQDLMNETL 49
>gi|13472576|ref|NP_104143.1| flagellar basal body rod protein FlgG [Mesorhizobium loti
MAFF303099]
gi|14023322|dbj|BAB49929.1| flagellar basal body distal rod protein; FlgG [Mesorhizobium loti
MAFF303099]
Length = 262
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA----RTHE 59
+ IA+ N ++++ NIAN +T Y+ + + F +L Q R++
Sbjct: 1 MKALAIAATGMNAQQTNLEVIANNIANINTTGYK-RARAEFSDLLYQVDRTQGVPNRSNA 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ + E S GL + Q + +GN+ +
Sbjct: 60 SLVPEGVSIGLGVKTTAVRNVHTQ-GELTSTGNSFDM 95
>gi|150390478|ref|YP_001320527.1| hypothetical protein Amet_2716 [Alkaliphilus metalliredigens
QYMF]
gi|149950340|gb|ABR48868.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
metalliredigens QYMF]
Length = 441
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R + NIAN +T Y+ ++ F+ + +Q A + ++
Sbjct: 8 AVSGLQAHQLRMDAIGNNIANVNTVGYKGTRVT-FQEVFSQTIRGAGAPQGGRGGTNPQQ 66
Query: 70 LHWNAHVIEAPLDQTTGVQVS 90
+ +V G S
Sbjct: 67 VGLGVNVASMSTFHVRGSAES 87
>gi|319781681|ref|YP_004141157.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317167569|gb|ADV11107.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 262
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA----RTHE 59
+ IA+ N ++++ NIAN +T Y+ + + F +L Q R++
Sbjct: 1 MKALAIAATGMNAQQTNLEVIANNIANINTTGYK-RARAEFSDLLYQVDRTQGVPNRSNA 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ + E S GL + Q + +GN+ +
Sbjct: 60 SLVPEGVSIGLGVKTTAVRNVHTQ-GELTSTGNSFDL 95
>gi|312876506|ref|ZP_07736489.1| fagellar hook-basal body protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796717|gb|EFR13063.1| fagellar hook-basal body protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 494
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVLKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A +D
Sbjct: 69 IGLGVSVASVD 79
>gi|261341494|ref|ZP_05969352.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
gi|288316290|gb|EFC55228.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
Length = 395
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ ++ + T ++ SSG L T + G+ V +T+EL +
Sbjct: 312 FSNPNGLSSQNGTTWTQTASSGAPLLGTPGTGLLGALTSNTLEGSNVNLTDELVGLMTAQ 371
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
Y+ NTK+I +SM+ + +
Sbjct: 372 RNYQANTKVISTNDSMMTALFQ 393
>gi|197120201|ref|YP_002140628.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
gi|197089561|gb|ACH40832.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
Length = 145
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 42/144 (29%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----------SSF 44
M T I++ R ++S N+AN ++ YR KD +SF
Sbjct: 1 MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
L+Q T +KE + N V E+
Sbjct: 61 GAALSQATSARSVQVTQIKEDPRPPRLQYEPGHPDADPNGYVAYPNINVV---EEMADMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 118 TASRSYEANITATQASKSMALKTL 141
>gi|57238273|ref|YP_178646.1| flagellar basal body rod protein FlgC [Campylobacter jejuni RM1221]
gi|57167077|gb|AAW35856.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni RM1221]
gi|315057945|gb|ADT72274.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni S3]
Length = 164
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIANA+T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K + S + + N
Sbjct: 61 RINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ +
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159
>gi|332799182|ref|YP_004460681.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
gi|332696917|gb|AEE91374.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
Length = 411
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+ ++ NIAN +T ++ ++ F+ L+Q A + + + ++ + +
Sbjct: 14 HQVKMDVIGNNIANVNTVGFKKSRVT-FQDTLSQTMRGAASPQGNRGGTNPMQVGLGMTI 72
Query: 77 IE-APLDQTTGVQVSGNTVGITNE 99
+ + + +GN ++ E
Sbjct: 73 ASIDTIHSPSSAEYTGNMTDLSIE 96
>gi|308175373|ref|YP_003922078.1| flagellar hook-basal body protein [Bacillus amyloliquefaciens DSM
7]
gi|307608237|emb|CBI44608.1| putative flagellar hook-basal body protein [Bacillus
amyloliquefaciens DSM 7]
gi|328555347|gb|AEB25839.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
TA208]
Length = 273
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ARTHETHLKESD 66
AS N L ++ VS N++N+ T Y+A+D S F ++ Q + + + +++++
Sbjct: 8 ASTALNQLQQQMDTVSSNLSNSDTTGYKARD-SRFSELIRQQYDQIDDKKENSPNMRKTP 66
Query: 67 SSGLHWNAHVIEAPLDQTTG 86
++ LD G
Sbjct: 67 PGLRLGAGAMMTPQLDSGQG 86
>gi|300870979|ref|YP_003785850.1| flagellar basal body rod protein FlgC [Brachyspira pilosicoli
95/1000]
gi|300688678|gb|ADK31349.1| flagellar basal body rod protein, FlgC [Brachyspira pilosicoli
95/1000]
Length = 153
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 43/148 (29%), Gaps = 20/148 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKD-----IS 42
M + + R ++++NIAN +T ++ +D S
Sbjct: 1 MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVVFKPRDDGNKYRS 60
Query: 43 SF--ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
F E + R ++ ++ +A V V E+
Sbjct: 61 PFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEM 120
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I+ +M +
Sbjct: 121 VDMMEASRAYEANSTMIQSAKTMFGSAL 148
>gi|254780090|ref|YP_003058197.1| flagellar basal body rod protein FlgC [Helicobacter pylori B38]
gi|254002003|emb|CAX30262.1| Flagellar basal-body rod protein FlgC [Helicobacter pylori B38]
Length = 161
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 29/154 (18%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
++ F I+ + R ++S NIAN +T YR ++ F ILNQ
Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANVNTTRTSEGGPYRRQEAVFKAFDFNEILNQKIA 62
Query: 54 -----------MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TV 94
+ + L S + PL + N V
Sbjct: 63 QNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNV 122
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ Y+ N + +M + +
Sbjct: 123 NAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156
>gi|254421122|ref|ZP_05034846.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
gi|196187299|gb|EDX82275.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
Length = 262
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ +++S NIAN +T ++ K + F+ +L QN +
Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFK-KQRAEFQDLLYQNVERMGAQSSSQG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG---VQVSGNTVGI 96
+G+ A V + + T +GN +
Sbjct: 60 TVVPTGIQIGAGVKAGAVYRVTEQGTPAQTGNDYDM 95
>gi|153953776|ref|YP_001394541.1| flagellar basal body rod protein FlgC [Clostridium kluyveri DSM
555]
gi|219854392|ref|YP_002471514.1| hypothetical protein CKR_1049 [Clostridium kluyveri NBRC 12016]
gi|146346657|gb|EDK33193.1| FlgC [Clostridium kluyveri DSM 555]
gi|219568116|dbj|BAH06100.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 143
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 12/139 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
+Q +I++ + R ++ N+AN T YR + I+ F+ L +
Sbjct: 2 IQAFNTLRISASGLSAERLRMDTIASNMANVETTKGADGNPYR-RKIAVFQENLQKQLNK 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQT-TGVQVSGN----TVGITNELYKSGHIKYL 109
A +E + + G+ + + D T G V I NE+
Sbjct: 61 AGRYENVSQGVKAVGIVEDNSEFKRVYDPTNADADADGYVSMPNVNILNEMADMMVAVRS 120
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE N I SM +
Sbjct: 121 YEANLSAISAEKSMFSKAL 139
>gi|91794993|ref|YP_564644.1| flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
gi|91716995|gb|ABE56921.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
Length = 261
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 28/64 (43%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG+ + L + G+ V + E+ + + YE+N K++ +
Sbjct: 192 YRETAASGVAVEGVAGDQALGGLRQGSLEGSNVNVVEEMVEMISTQRAYEMNAKVVSASD 251
Query: 122 SMVM 125
M+
Sbjct: 252 DMLK 255
>gi|119715008|ref|YP_921973.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
gi|119535669|gb|ABL80286.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
Length = 130
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 42/129 (32%), Gaps = 3/129 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M IA ++ NIAN +T +++ + ++ ++ +
Sbjct: 1 MGAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAVGGGVEVA 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
L +SD G + + ++ ++ + + ++ + ++ K+
Sbjct: 61 GLAQSDPQGRLVSDPGNPMADADGYVRAPD---MDMSTQMTQLVMAQRGFQASVQVTKQA 117
Query: 121 NSMVMHVVR 129
++
Sbjct: 118 QETYTAALQ 126
>gi|119947179|ref|YP_944859.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
gi|119865783|gb|ABM05260.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
Length = 142
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 9/137 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI-----SSFETILNQNFLMA 55
M F A + R +S N+ANA + + +D+ F TI N +
Sbjct: 1 MSFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGS 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYE 111
++ + + + ++ + + GN + + +E+ +E
Sbjct: 61 ASNIRSAQVMVADVIATDSLTQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFE 120
Query: 112 LNTKLIKKLNSMVMHVV 128
+N +++ SM ++
Sbjct: 121 MNVEVLNNAKSMQQSLI 137
>gi|58426792|gb|AAW75829.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas oryzae pv. oryzae KACC10331]
Length = 341
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTH-ETH 61
+A + R ++S N+AN +T ++ +D ++FE +L Q A+T T
Sbjct: 87 VAKTGLDAQQTRMSVISNNLANTNTTGFK-RDRAAFEDLLYQQVRAPGGSTSAQTQLPTG 145
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
L+ + + Q TG +
Sbjct: 146 LQLGTGVRVVSTFKGFDQGSQQQTGRALD 174
>gi|27381995|ref|NP_773524.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
USDA 110]
gi|27355165|dbj|BAC52149.1| flagellar basal body rod protein [Bradyrhizobium japonicum USDA
110]
Length = 242
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
MQ + +++Q A L +R + ++ N+AN +T +R D+ FET+L++
Sbjct: 1 MQSALYVGLSAQVA--LEKRLQTIANNVANVNTAAFRT-DVVKFETVLSKAGA 50
>gi|296282277|ref|ZP_06860275.1| flagellar basal body rod protein FlgG [Citromicrobium
bathyomarinum JL354]
Length = 262
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
P + Q+A R ++++ N+AN T ++ +D ++F T+ Q+ +A +
Sbjct: 2 PTSALQVARTGLEAQDARMRVIANNLANVGTTGFK-RDRANFATLAYQDARVAGQKSSGE 60
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ +++ T +
Sbjct: 61 TAYATGLNLGTGVAVQSTSQIMTAGTLD 88
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L E+ +SG E Q + G+ V I EL + YE+++K++ ++
Sbjct: 193 LAETAASGAAELGIAGEGGRGQIRQGMLEGSNVNIVEELVAMIEAQRAYEISSKMVSAVD 252
Query: 122 SMVMHV 127
M+ +
Sbjct: 253 EMLRNA 258
>gi|188580158|ref|YP_001923603.1| flagellar hook-associated protein FlgK [Methylobacterium populi
BJ001]
gi|179343656|gb|ACB79068.1| flagellar hook-associated protein FlgK [Methylobacterium populi
BJ001]
Length = 632
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ + +VS+NIAN T Y + +S + + T L
Sbjct: 3 LDAFSTATAGLRVTQAQIGVVSQNIANVGTAGYVRRTLSPVAAGVGNAGVATGTIGRALD 62
Query: 64 E-------SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGIT 97
S++SG + + + T G++ +
Sbjct: 63 AAALKQLRSETSGAAYTGLMAQTRTQLDTLYGRPGDSSALD 103
>gi|170748127|ref|YP_001754387.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654649|gb|ACB23704.1| flagellar basal body rod protein [Methylobacterium radiotolerans
JCM 2831]
Length = 246
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQ + +++Q A L +R V+ N+AN T YRA+++ FETIL+Q T
Sbjct: 1 MQSSLYVTLSAQMA--LEQRLNTVAANVANLGTVGYRAEEVK-FETILSQAGHRDVAFAT 57
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
E+ S ++PLD G+Q G
Sbjct: 58 -PGETFLSRKAGPLIKTDSPLD--VGLQGDG 85
>gi|170288059|ref|YP_001738297.1| hypothetical protein TRQ2_0255 [Thermotoga sp. RQ2]
gi|170175562|gb|ACB08614.1| protein of unknown function DUF1078 domain protein [Thermotoga
sp. RQ2]
Length = 750
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+V NI+N +T ++A + +FET+L Q R+ + ++ ++ + + V
Sbjct: 19 MDVVGNNISNVNTVGFKASRV-NFETMLAQTIKAGRSSQENVGGTNPMQIGLGSQVS 74
>gi|114707045|ref|ZP_01439944.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
gi|114537595|gb|EAU40720.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
Length = 390
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M F+ + N S + VS+NIAN++T Y+ D+ ++N T +
Sbjct: 1 MSINGVFRTSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSGGRGNYTSGS 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
L ++ + V + G
Sbjct: 61 VLSQTRYD-ISTQGLVTTTSSKTDLAISGDG 90
>gi|312792656|ref|YP_004025579.1| fagellar hook-basal body protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179796|gb|ADQ39966.1| fagellar hook-basal body protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 494
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVLKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A +D
Sbjct: 69 IGLGVSVASVD 79
>gi|289433975|ref|YP_003463847.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289170219|emb|CBH26759.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|313634374|gb|EFS00969.1| flagellar hook protein FlgE [Listeria seeligeri FSL N1-067]
gi|313639059|gb|EFS04046.1| flagellar hook protein FlgE [Listeria seeligeri FSL S4-171]
Length = 411
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
A + D T G S
Sbjct: 65 SFGSGAKIGAILTDYTAGSPTS 86
>gi|254521223|ref|ZP_05133278.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp.
SKA14]
gi|219718814|gb|EED37339.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp.
SKA14]
Length = 257
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTH-ETH 61
IA + R +VS N+AN +T ++ +D +SFE +L Q A+T T
Sbjct: 3 IAKTGLDAQQMRMSVVSNNLANTNTTGFK-QDRASFEDLLYQQVRQPGGSSSAQTQLPTG 61
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
L+ + A E Q TG +
Sbjct: 62 LQLGTGVRVVATAKNFEQGGQQQTGRALD 90
>gi|331005445|ref|ZP_08328824.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
gi|330420721|gb|EGG95008.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
Length = 400
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
AS S+ VS N+AN +TP ++ D+ F + Q + + +
Sbjct: 8 TASTGMLTFSKGLSTVSNNVANLNTPGFKRSDLL-FRDLFYQFQQSGEMDGQTSAQQNGA 66
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
G+ + +Q +GN+ +
Sbjct: 67 GVTDAGTITSFA---AGDIQQTGNSTDV 91
>gi|226225712|ref|YP_002759818.1| flagellar basal-body rod protein FlgF [Gemmatimonas aurantiaca
T-27]
gi|226088903|dbj|BAH37348.1| flagellar basal-body rod protein FlgF [Gemmatimonas aurantiaca
T-27]
Length = 234
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
A+ L +Q++++ N+ANAST ++A+ ++F ++ A T
Sbjct: 13 AASALQMLERKQQVLANNLANASTRGFKAE--TTFARMMGNQLAKADT 58
>gi|323139654|ref|ZP_08074696.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
49242]
gi|322395086|gb|EFX97645.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
49242]
Length = 262
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + + ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMSAQQQNIEVIAHNIANINTTGFK-RSRAEFTDLLYQTDRLQGVSNRGRD 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ G + V A + NT +
Sbjct: 60 ATVPQGAQFGLGVRAAAVRSLQQQGPLTNTGNM 92
>gi|255028426|ref|ZP_05300377.1| flagellar basal body rod protein FlgC [Listeria monocytogenes LO28]
Length = 124
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 17/115 (14%)
Query: 21 QKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMARTHETHLKESDSSG 69
++ S NIANA TP R + +I+ FET L + + + SD+
Sbjct: 7 MEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEIS----SDTGS 62
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ ++ V + V +T E+ + +Y NT ++ M+
Sbjct: 63 VKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVGQKMYAANTSALQANEKMM 115
>gi|86151838|ref|ZP_01070052.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 260.94]
gi|148925898|ref|ZP_01809585.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|157414808|ref|YP_001482064.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 81116]
gi|205355383|ref|ZP_03222154.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|283954185|ref|ZP_06371710.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 414]
gi|283955949|ref|ZP_06373439.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 1336]
gi|315124050|ref|YP_004066054.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841467|gb|EAQ58715.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 260.94]
gi|145844884|gb|EDK21988.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|157385772|gb|ABV52087.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|205346617|gb|EDZ33249.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|283792609|gb|EFC31388.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 1336]
gi|283794464|gb|EFC33208.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 414]
gi|284925790|gb|ADC28142.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315017772|gb|ADT65865.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315931721|gb|EFV10676.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 327]
Length = 164
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIANA+T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K + S + + N
Sbjct: 61 QINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ +
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159
>gi|328913715|gb|AEB65311.1| putative flagellar hook-basal body protein [Bacillus
amyloliquefaciens LL3]
Length = 274
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ARTHETHLKESD 66
AS N L ++ VS N++N+ T Y+A+D S F ++ Q + + + +++++
Sbjct: 9 ASTALNQLQQQMDTVSSNLSNSDTTGYKARD-SRFSELIRQQYDQIDDKKENSPNMRKTP 67
Query: 67 SSGLHWNAHVIEAPLDQTTG 86
++ LD G
Sbjct: 68 PGLRLGAGAMMTPQLDSGQG 87
>gi|154687758|ref|YP_001422919.1| FlhP [Bacillus amyloliquefaciens FZB42]
gi|154353609|gb|ABS75688.1| FlhP [Bacillus amyloliquefaciens FZB42]
Length = 273
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKES 65
AS + L ++ VS N++N+ T Y+A+D S F ++ Q + + +++++
Sbjct: 7 TASTALHQLQQQMDTVSSNLSNSDTTGYKARD-SRFSELIRQQYDHIDDKKENSPNMRKT 65
Query: 66 DSSGLHWNAHVIEAPLDQTTG 86
V+ LD G
Sbjct: 66 PPGLRLGAGTVMTPQLDSGQG 86
>gi|255261552|ref|ZP_05340894.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
gi|255103887|gb|EET46561.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
Length = 261
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 6/101 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ QIA+ R +++S N+AN +T Y A+ + F + Q T
Sbjct: 1 MRALQIAATGMAAQQMRVEVISNNLANMNTTGYNARR-AEFADLHYQQIARPGTINAADG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-TVGITNE 99
T L GL + L Q G+ V I E
Sbjct: 60 TVLPTGVQLGLGVRPTAVSMILSQGALSATGGDLDVAIEGE 100
>gi|224370789|ref|YP_002604953.1| FlgC [Desulfobacterium autotrophicum HRM2]
gi|223693506|gb|ACN16789.1| FlgC [Desulfobacterium autotrophicum HRM2]
Length = 165
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 50/161 (31%), Gaps = 33/161 (20%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKDISSFETI 47
M + +I++ + +++EN+AN T ++ + + +F+++
Sbjct: 1 MDLLDSMKISATGLAAHRTKMNVIAENLANVDTTRTADGGPYRRKMVVFKDQALENFKSV 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVS----GN----------- 92
L +N + + + + +D+ Q N
Sbjct: 61 LEKNQQTNQVAQVEFSPIEVGKNDPQSRGTGVAVDEIVQSQEDFRLVYNPAHPDADPVTG 120
Query: 93 -----TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ K YE + I SM++ +
Sbjct: 121 YVAMPNVDHLTEVADMIVAKRSYEASITAISNTKSMILKAL 161
>gi|207110637|ref|ZP_03244799.1| hypothetical protein HpylH_16375 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 19
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 24 VSENIANASTPNYRAKDI 41
++ NIAN TP YR KD+
Sbjct: 2 IASNIANVDTPFYRPKDL 19
>gi|182418356|ref|ZP_02949651.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
gi|237666561|ref|ZP_04526546.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182377738|gb|EDT75282.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
gi|237657760|gb|EEP55315.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 135
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M QI++ + R ++ N++NA T + I+ F+ L+ N M
Sbjct: 1 MNAFKSMQISATGLSAERLRMDTITSNMSNARTTRSADGSGPYVRRIAVFQEALDANKEM 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + E D+S L + D+ V + V + NE+ YE N
Sbjct: 61 AGVKAVKI-EKDNSPLRKEYNPNHPDADENGYVTMP--NVNVLNEMADMMVATRSYEANV 117
Query: 115 KLIKKLNSMVMHVV 128
L SM +
Sbjct: 118 DTFNALKSMFSKAL 131
>gi|86149025|ref|ZP_01067257.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596860|ref|ZP_01100096.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218562179|ref|YP_002343958.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|85840383|gb|EAQ57640.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190549|gb|EAQ94522.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359885|emb|CAL34673.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|315928561|gb|EFV07858.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 305]
Length = 164
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIANA+T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K + S + + N
Sbjct: 61 QINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ +
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAI 159
>gi|254519424|ref|ZP_05131480.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
gi|226913173|gb|EEH98374.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
Length = 134
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M +I++ + R ++ NI NA+T Y + I+ F+ L++ +
Sbjct: 1 MGIFNTMRISASGLSAERLRMDTITSNITNATTTRGEDGKPYV-RKIAVFQENLDKANKL 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ E +S + + V + NE+ YE N
Sbjct: 60 NGVKAVEIVEDESPLKSVYDPTHPDANEDGYVTMPN---VNLLNEMADIIAASRAYEANV 116
Query: 115 KLIKKLNSMVMHVV 128
+ SM +
Sbjct: 117 DTLNASKSMFTKSL 130
>gi|94495409|ref|ZP_01301989.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
gi|94424797|gb|EAT09818.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
Length = 262
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH 58
+A + + + ++++ N+AN +T ++ KD + FET+ Q + A +
Sbjct: 6 LHVARTGLDAQNTKMRVIANNLANVNTTGFK-KDRADFETLAYQQIVQAGAN 56
>gi|56421866|ref|YP_149184.1| flagellar hook-basal body protein [Geobacillus kaustophilus
HTA426]
gi|56381708|dbj|BAD77616.1| flagellar hook-basal body protein [Geobacillus kaustophilus
HTA426]
Length = 273
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHL 62
A+ N L +R +S NIAN++T ++ ++ +SF +L Q N R +
Sbjct: 7 TAANTMNALQQRLDTISHNIANSNTVGFKRRE-ASFAELLTQQIDRLPNDEAPRQTPEGV 65
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + + L + + TG ++
Sbjct: 66 RYGNGARLASTMLITKQGALVETGRRLD 93
>gi|329890582|ref|ZP_08268925.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
11568]
gi|328845883|gb|EGF95447.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
11568]
Length = 144
Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 27/129 (20%)
Query: 9 IASQHANWLSERQKIVSENIANAS--------------TPNYRAKDISSFETILNQNFLM 54
+AS R +I++ENIANA TP ++A+++ ++
Sbjct: 19 VASSALKAQQSRMRIIAENIANAESTANVAGGQPYRRQTPVFQARNVDGATGVVLAEVRP 78
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ + S ++ P V E + YE N
Sbjct: 79 DQSDFR-MDYDPSHPAANAEGYVQRP------------NVDTLVEAMDMREAQRAYEANL 125
Query: 115 KLIKKLNSM 123
+I+ +M
Sbjct: 126 NVIETARNM 134
>gi|296126376|ref|YP_003633628.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
gi|296018192|gb|ADG71429.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
Length = 282
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R +V+ N+AN P ++ +D SF++ + ART + + +V
Sbjct: 16 QARLDVVANNLANVDKPGFK-RDTVSFKSF--PEMMAARTEDDGVVIFPLGSTDVRPYVG 72
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
TGV+V N V E ++
Sbjct: 73 RMG----TGVEV--NEVFTEWEQGSLRETGNQLDIALG 104
>gi|118474843|ref|YP_891880.1| flagellar basal body rod protein FlgC [Campylobacter fetus subsp.
fetus 82-40]
gi|118414069|gb|ABK82489.1| flagellar basal-body rod protein FlgC [Campylobacter fetus subsp.
fetus 82-40]
Length = 164
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 48/162 (29%), Gaps = 37/162 (22%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M ++ F I+ + R ++S NIANA+T YR +++ ++
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKAIEFDKELNK 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ-------------------------- 88
+ + ++++ +A P + V
Sbjct: 61 SINSKNDFLKNENPLNDPDAPEFPKPALMSVVVDKIVRDDKDFKLKYDPTHPDADAKGYI 120
Query: 89 --VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ N V E+ Y+ N + S+ +
Sbjct: 121 MLPNINPVI---EMADLIEATRAYQANVSAFQSAKSIATSAI 159
>gi|148253640|ref|YP_001238225.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. BTAi1]
gi|146405813|gb|ABQ34319.1| dihydroxyacid dehydratase [Bradyrhizobium sp. BTAi1]
Length = 578
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
H + + K + +N+A+A PNY A+ I+ FET +A + L
Sbjct: 342 HKDARTVNGKTLWDNVADA--PNYNAEVITPFETPFKSEAGIA---------ILTGNLAP 390
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGIT--NELYKSGH 105
N VI+ + +G V E++ +
Sbjct: 391 NGAVIKPSAASPELMNHTGRAVVFESVEEMHDAVD 425
>gi|317121025|ref|YP_004101028.1| flagellar basal-body rod protein FlgF [Thermaerobacter
marianensis DSM 12885]
gi|315591005|gb|ADU50301.1| flagellar basal-body rod protein FlgF [Thermaerobacter
marianensis DSM 12885]
Length = 249
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA-KDIS-SFETILNQNFLMARTHETHLKESD 66
A+ +Q+ ++ ++AN +TP Y+A ++++ +F + A +
Sbjct: 7 TAASGMLARVLQQERLANDLANVNTPGYKASRNVTEAFPELFVARLERAGAAPVGPVGTG 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQ 88
+ + P +T Q
Sbjct: 67 AVVAEPGLDLTAGPWLETGRPQ 88
>gi|237796094|ref|YP_002863646.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
gi|229263494|gb|ACQ54527.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
Length = 332
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ +V NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTKLDVVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQIGLGVQVA 74
Query: 78 EAPLDQTTG 86
TTG
Sbjct: 75 GMYTKFTTG 83
>gi|222053739|ref|YP_002536101.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
gi|221563028|gb|ACM19000.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
Length = 479
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 17/96 (17%)
Query: 1 MQPITFFQIASQHANWLSERQ--KIVSENIANASTPNYRAKDISSFETILNQNFLMARTH 58
M F IA++ ++RQ ++ SENIAN +TP Y ++ ++ +
Sbjct: 1 MGINDIFSIATRGI--AAQRQAIEVTSENIANVNTPGY------------SRQRVIMESG 46
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQ-VSGNT 93
++ G ++ D Q V+GN+
Sbjct: 47 PANIASGFPIGGGVEVVAVQRSYDNLLQTQLVNGNS 82
>gi|300854230|ref|YP_003779214.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
13528]
gi|300434345|gb|ADK14112.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
13528]
Length = 255
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMARTHETH 61
I F A +Q +++ N+ANA+T ++ D + SF +L QN+ + +
Sbjct: 2 IRSFYSAVSGMITQEAKQDVITNNLANANTVGFKQDDLRVKSFNDMLLQNYDKTEGNRSV 61
Query: 62 ----LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
S SG+ +TGV
Sbjct: 62 RNIIGSISLGSGIDSVKTGFTQGSIDSTGVSTD 94
>gi|288962678|ref|YP_003452972.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288914944|dbj|BAI76428.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 261
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IAS +++S NIAN +T Y+ + + F+ ++ Q + T
Sbjct: 1 MRVLSIASTGMMAQQLNVEVISNNIANINTTAYK-RSRAEFQDLMYQAEKRQGSQSTDSG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ---TTGVQVSGNTVGITNE 99
+G+ V +++ T + +GN + + E
Sbjct: 60 TIVPTGVEVGLGVRPTSVNRINTTGNLTSTGNELDLAIE 98
>gi|168182737|ref|ZP_02617401.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
gi|182674150|gb|EDT86111.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
Length = 332
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ +V NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTKLDVVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQIGLGVQVA 74
Query: 78 EAPLDQTTG 86
TTG
Sbjct: 75 GMYTKFTTG 83
>gi|153953797|ref|YP_001394562.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
555]
gi|219854413|ref|YP_002471535.1| hypothetical protein CKR_1070 [Clostridium kluyveri NBRC 12016]
gi|146346678|gb|EDK33214.1| FlgG1 [Clostridium kluyveri DSM 555]
gi|219568137|dbj|BAH06121.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 255
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS--SFETILNQN 51
I F A +Q +++ N+AN +T ++ D+ F +L QN
Sbjct: 2 IRSFYTAVSGMIVQEAKQDVITNNLANVNTVGFKQDDLKSTPFNEVLIQN 51
>gi|190574261|ref|YP_001972106.1| flagellar basal body rod protein FlgG [Stenotrophomonas
maltophilia K279a]
gi|194365678|ref|YP_002028288.1| flagellar basal body rod protein FlgG [Stenotrophomonas
maltophilia R551-3]
gi|190012183|emb|CAQ45806.1| putative flagellar basal-body rod protein [Stenotrophomonas
maltophilia K279a]
gi|194348482|gb|ACF51605.1| flagellar basal-body rod protein FlgG [Stenotrophomonas
maltophilia R551-3]
Length = 261
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM------ARTH-ETH 61
IA + R +VS N+AN +T ++ +D +SFE +L Q A+T T
Sbjct: 7 IAKTGLDAQQMRMSVVSNNLANTNTTGFK-QDRASFEDLLYQQVRQPGGSSSAQTQLPTG 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
L+ + A E Q TG +
Sbjct: 66 LQLGTGVRVVATAKNFEQGGQQQTGRALD 94
>gi|57167572|ref|ZP_00366712.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
gi|305433078|ref|ZP_07402234.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
gi|57020694|gb|EAL57358.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
gi|304443779|gb|EFM36436.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
Length = 164
Score = 37.6 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIANA+T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K + S + + N
Sbjct: 61 QINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAQGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ +
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159
>gi|85710165|ref|ZP_01041230.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
gi|85688875|gb|EAQ28879.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
Length = 247
Score = 37.6 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A + RQ++V+ N+ANASTP +R + + + L + AR+ K + S
Sbjct: 7 TALTGMDASMNRQRMVANNLANASTPGFRKEVFTVTPSTLRDGSIEARSLA---KGAVRS 63
Query: 69 GLHWNAHVIEAPLDQTTGVQVSG 91
A V P Q + V G
Sbjct: 64 ADMAPAKV--NPTGQPLDIAVEG 84
>gi|312115282|ref|YP_004012878.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
ATCC 17100]
gi|311220411|gb|ADP71779.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
ATCC 17100]
Length = 241
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
L +R V++N+ANA+T YR ++ F+++L+
Sbjct: 15 LQKRLDTVAQNVANANTVGYRGTEMK-FDSVLSAADAQMTA 54
>gi|159045919|ref|YP_001534713.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
gi|157913679|gb|ABV95112.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
Length = 434
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
N + R +S+NIAN+ST Y+ + + F++++ ++ + + +
Sbjct: 12 SGLNANATRLATISDNIANSSTYGYK-RAEADFQSLVINGNSSGTYSAGGVRVTTTRVID 70
Query: 72 WNAHVIEAPLDQTTGVQVSGN 92
++ V SG
Sbjct: 71 EQGPLVTTSNPTDLAVGGSGM 91
>gi|119477955|ref|ZP_01618055.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
HTCC2143]
gi|119448868|gb|EAW30110.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
HTCC2143]
Length = 147
Score = 37.2 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 17/145 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETIL------ 48
M F IA + S R + N+ANA + YRA+ FET+
Sbjct: 1 MSLANVFDIAGMGMSAQSIRLNTTASNLANAQAASSNIDEVYRARH-PVFETMRMDMMAN 59
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSG 104
N + + + + + +A ++ G V + E+
Sbjct: 60 NNGSMPTLADDASMGMRVTGIVESDAPLVRRYEPNHLKADEEGYVYYPNVNVVEEMADMI 119
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVR 129
+++N +L+ M+ ++R
Sbjct: 120 SASRSFQVNVELMNSAKQMMQGLLR 144
>gi|254461663|ref|ZP_05075079.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
HTCC2083]
gi|206678252|gb|EDZ42739.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
HTCC2083]
Length = 262
Score = 37.2 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETHLKES 65
+A N R ++++ N++N +T +++ D +FE++L + + T L +
Sbjct: 8 VAKTGLNAQQTRMQVIANNLSNLNTVGFKS-DRVNFESLLYQVKRGGGDQTSEGTELTSA 66
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ G A + Q V N+ +
Sbjct: 67 LALGTGVRAVNTQKLYSQGGMVNTD-NSFDL 96
>gi|167770210|ref|ZP_02442263.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
17241]
gi|167667532|gb|EDS11662.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
17241]
Length = 556
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+R ++ NIAN +T +++ ++ F + QN A + SG+
Sbjct: 6 AGMKSHQQRMDVIGNNIANVNTYGFKSSRVT-FRDMFYQNIRNASAGTSTRGGVSPSGVG 64
Query: 72 WNAHVI 77
+ + +
Sbjct: 65 YGSQIA 70
>gi|58582193|ref|YP_201209.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|58426787|gb|AAW75824.1| flagellar biosynthesis cell-proximal portion of basal-body rod
[Xanthomonas oryzae pv. oryzae KACC10331]
Length = 127
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 11/127 (8%), Positives = 37/127 (29%), Gaps = 9/127 (7%)
Query: 9 IASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMARTHETHL 62
+A + S R ++ N+ANA + Y+ + Q+ + + +
Sbjct: 1 MAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSLTSVNVKEI 60
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+++ + V +++ Y+ +++
Sbjct: 61 TTTNAPPIRRYEPGHPLADADGYVFSPD---VDPVSQMVNMISASRNYQAGVEMLNTAKE 117
Query: 123 MVMHVVR 129
+ + +
Sbjct: 118 LALATLT 124
>gi|56965598|ref|YP_177332.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
gi|56911844|dbj|BAD66371.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
Length = 265
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 9/93 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA-----KDISSFETILNQNFLMARTHETHLK 63
A+ Q +++ N+ANA TP Y+A + +F + L
Sbjct: 7 TATSGMLAAQYHQDMLANNLANAQTPGYKAEQSVSRAFPTFLMEAQSVSKAGTVQKQGLG 66
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
++ D +Q +GNT +
Sbjct: 67 SLATAVYLQEQQTNARQGD----IQETGNTTDL 95
>gi|226944493|ref|YP_002799566.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
gi|226719420|gb|ACO78591.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
Length = 251
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKES 65
F S L + Q +V+ N+ANA TP +RA+ + ++ L R +
Sbjct: 5 LFTAMSGAKQSLDQ-QAVVAHNLANAVTPGFRAQLMELQAVPVDGEGLPTRVSVR----A 59
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNT 93
+SG+ ++ + + V + GN
Sbjct: 60 TTSGVDFSQGPVTR-TGRPLDVALDGNA 86
>gi|329888226|ref|ZP_08266824.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta
ATCC 11568]
gi|328846782|gb|EGF96344.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta
ATCC 11568]
Length = 262
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+A+Q N +++S NIAN +T ++ + + F+ +L QN +
Sbjct: 10 GMAAQQLNV-----EVISNNIANMNTVGFKRQR-AEFQDLLYQNVERMGAQSSSQGTVVP 63
Query: 68 SGLHWNAHVIEAPLDQTTG---VQVSGNTVGITNE 99
+G+ + V + + T +GNT I +
Sbjct: 64 TGIQIGSGVKAGSVYRITEQGSPNRTGNTYDIAIQ 98
>gi|302382558|ref|YP_003818381.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC
15264]
gi|302193186|gb|ADL00758.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC
15264]
Length = 478
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
+S+NIAN +T Y+ + + F T++N A + + + + +
Sbjct: 22 AAISQNIANVNTVGYK-RTAAEFSTVVNSQSQGAGYSAGGVLANTRNYIAQGGQLQRTTS 80
Query: 82 DQTTGVQVSGNTVGITN-ELYKSGHIKYLYELNT 114
G+ G V E +G +
Sbjct: 81 STDLGIAGQGFFVTTEKAEGLDAGDARLFTRAGA 114
>gi|149927799|ref|ZP_01916050.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
gi|149823421|gb|EDM82652.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
Length = 245
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
+A+Q A RQ+ ++ N+AN +TP +R + + +F++
Sbjct: 7 LAAQAAKGTMSRQENIANNLANVNTPGFR-QQLMAFQSA 44
>gi|238028849|ref|YP_002913080.1| flagellar hook protein FlgE [Burkholderia glumae BGR1]
gi|237878043|gb|ACR30376.1| Hypothetical protein bglu_1g33140 [Burkholderia glumae BGR1]
Length = 412
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++A + F + + A + + ++ A
Sbjct: 19 VIGNNIANANTVGFKAAS-AQFSDLYANSVSGAVANGIGIGTQLATVAQVFQQGGFATSQ 77
Query: 83 QTTGVQVSGN 92
+ +SGN
Sbjct: 78 NPLSMAISGN 87
>gi|297618421|ref|YP_003703580.1| flagellar basal-body rod protein FlgF [Syntrophothermus
lipocalidus DSM 12680]
gi|297146258|gb|ADI03015.1| flagellar basal-body rod protein FlgF [Syntrophothermus
lipocalidus DSM 12680]
Length = 256
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 19 ERQKIVSENIANASTPNYRAKDIS 42
+Q +++ N+ANASTP ++ KD++
Sbjct: 17 AKQDVIANNLANASTPGFK-KDLA 39
>gi|302342345|ref|YP_003806874.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
2075]
gi|301638958|gb|ADK84280.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
2075]
Length = 147
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 15/143 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAK----DISSFETILNQ 50
M +T +I++ + R I+S+N+ANA T YR + F + L Q
Sbjct: 1 MDFVTSMEISASGLSAQRTRLNIISQNLANAETTRTAEGGPYRRRVTVMSAQPFVSHLEQ 60
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTT-GVQVSGN----TVGITNELYKSGH 105
+ K + + + + D + G V + E+
Sbjct: 61 AIDSPPQQQDPRKGVLVNEIAQDNSPFKKVHDPSHPDADADGYVLYPNVDVVTEMVNLIS 120
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N + +M + +
Sbjct: 121 ATRSYEANVSAVGASKNMALKAL 143
>gi|225619783|ref|YP_002721040.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
WA1]
gi|225214602|gb|ACN83336.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
WA1]
Length = 153
Score = 37.2 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 20/148 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------YRAKD-----IS 42
M + + R ++++NIAN +T ++ +D S
Sbjct: 1 MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFKPRDDGNKYRS 60
Query: 43 SF--ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
F + + R ++ ++ +A V V E+
Sbjct: 61 PFLPDALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEM 120
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ +I+ +M +
Sbjct: 121 VDMMEASRAYEANSTMIQSAKTMFGSAL 148
>gi|295697724|ref|YP_003590962.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
gi|295413326|gb|ADG07818.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
Length = 273
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMARTHETHLKESD 66
IA+ R++IV+ N+ NASTP Y+ + + +F + + +
Sbjct: 7 IAASGMIAQQRREEIVANNLVNASTPGYKQDEPSLRTFGDLFLRRLGSPASGTALPLAPG 66
Query: 67 SSGLHWNAHVIEAPLDQTTGV 87
L+ A + +AP T G
Sbjct: 67 VGPLNLGATMEDAPPRFTPGP 87
>gi|297531534|ref|YP_003672809.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
gi|297254786|gb|ADI28232.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
Length = 273
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHL 62
A+ N L ER +S NIAN++T ++ ++ +SF +L Q N R +
Sbjct: 7 TAANTMNALQERLDTISHNIANSNTVGFKRRE-ASFAELLTQQIDRLPNDEAPRQTPEGV 65
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + + L + + TG ++
Sbjct: 66 RYGNGARLASTMLITKQGALVETGRRLD 93
>gi|225620642|ref|YP_002721900.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
gi|225215462|gb|ACN84196.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
Length = 282
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 9/98 (9%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
R +V+ N+AN P ++ +D SF+ + ART + + +V
Sbjct: 16 QARLDVVANNLANVDKPGFK-RDTVSFKAF--PEMMAARTEDDGVVIFPLGSTDVRPYVG 72
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
TGV+V N V E ++
Sbjct: 73 RMG----TGVEV--NEVFTEWEQGSLRETGNQLDIALG 104
>gi|254473360|ref|ZP_05086757.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
gi|211957476|gb|EEA92679.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
Length = 241
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQ----NFLMARTHETHLKESDSSGLHW 72
L R + V+ N+AN T YRA ++ F++++ + A T E ++ +
Sbjct: 16 LERRLETVARNVANMETAGYRADEVK-FDSLVKRPGKDPVTFASTGENYISRQAGAIKQT 74
Query: 73 NAHVIEAPLDQTTGVQVSGNTVG 95
+ A +GN V
Sbjct: 75 GNSLDVAIEGSGWLGIQTGNGVA 97
>gi|261420740|ref|YP_003254422.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
gi|319768410|ref|YP_004133911.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
gi|261377197|gb|ACX79940.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
gi|317113276|gb|ADU95768.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
Length = 273
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ------NFLMARTHETHL 62
A+ N L ER +S NIAN++T ++ ++ +SF +L Q N R +
Sbjct: 7 TAANTMNALQERLDTISHNIANSNTVGFKRRE-ASFAELLTQQIDRLPNDEAPRETPAGV 65
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + + L + + TG ++
Sbjct: 66 RYGNGARLASTMLITKQGALVETGRRLD 93
>gi|52841449|ref|YP_095248.1| flagellar basal body rod protein FlgC [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54294161|ref|YP_126576.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
Lens]
gi|148358804|ref|YP_001250011.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
Corby]
gi|296106849|ref|YP_003618549.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
2300/99 Alcoy]
gi|52628560|gb|AAU27301.1| flagellar basal body rod protein FlgC [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53753993|emb|CAH15464.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
Lens]
gi|148280577|gb|ABQ54665.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
Corby]
gi|295648750|gb|ADG24597.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
2300/99 Alcoy]
gi|307609975|emb|CBW99504.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 130b]
Length = 140
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 6 FFQIASQHANWLSERQKIVSENIANAS----TPN--YRAKDISSFETILNQNFLMARTHE 59
F IA+ + R + N++NA+ +P+ Y+AK N N M +
Sbjct: 6 IFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWMGEQIK 65
Query: 60 THLKESDSSGLHWNAHVIEAP-----LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+K H P + N V E+ Y++N
Sbjct: 66 AGVKLDGIYESDAEPHRRYDPNSPIADKDGFVYTSNINYV---EEMANIISASRSYQMNI 122
Query: 115 KLIKKLNSMVMHVVR 129
+L+ ++ ++
Sbjct: 123 ELLNTTKQLMQRTLQ 137
>gi|152965588|ref|YP_001361372.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
SRS30216]
gi|151360105|gb|ABS03108.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
SRS30216]
Length = 482
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
M + AS+ + +NIAN +TP Y + + ++LNQ
Sbjct: 1 MSTFSGINTASRALGAAQRGMETTGQNIANVNTPGYSRQRVEQSSSVLNQTGQ 53
>gi|322421737|ref|YP_004200960.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
gi|320128124|gb|ADW15684.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
Length = 145
Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 40/144 (27%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----------SSF 44
M T I++ R ++S N+AN ++ YR KD SF
Sbjct: 1 MDFFTSMDISASALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPVTEGKSF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
L++ T + E + N V E+
Sbjct: 61 GAALSRANEARSVQVTQINEDQRPPRLQYEPGHPDADANGYVAYPNINVV---EEMADMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 118 TASRSYEANITATQAAKSMALKTL 141
>gi|298529920|ref|ZP_07017322.1| flagellar hook-associated protein FlgK [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509294|gb|EFI33198.1| flagellar hook-associated protein FlgK [Desulfonatronospira
thiodismutans ASO3-1]
Length = 701
Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 25 SENIANASTPNYRAKDIS-SFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
++NIA R DI+ SFE +Q + SD+S +NA ++ D
Sbjct: 596 AKNIAELQD---RKVDITTSFEGTTSQTIQEYYNSLSGNVGSDTSMTKFNADYNKSLTDD 652
Query: 84 TTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
Q + V + E+ ++ Y+ ++I + M+ ++
Sbjct: 653 LDRRQQEKSGVNLDEEMSNLIKYQHSYQAAARMISTADQMMQTLL 697
>gi|167626157|ref|YP_001676451.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
HAW-EB4]
gi|167356179|gb|ABZ78792.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
HAW-EB4]
Length = 261
Score = 37.2 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG + L Q + G V + E+ + + YE+N K++ +
Sbjct: 192 YRETGASGAAVEGIAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251
Query: 122 SMVM 125
M+
Sbjct: 252 DMLK 255
>gi|219670161|ref|YP_002460596.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
DCB-2]
gi|219540421|gb|ACL22160.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
DCB-2]
Length = 176
Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 52/171 (30%), Gaps = 43/171 (25%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------------YRAKDI 41
M I++ R ++S NIAN +T ++A+
Sbjct: 1 MGIFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEAGNQIPYQRQVVVFKARGT 60
Query: 42 -SSFETILNQNFL-MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------- 92
SSF LNQ + + L+ +SG N ++A + T ++ N
Sbjct: 61 ESSFAETLNQALQGRSVSTTALLQGQTTSGATGNGVEVQAIAEDTLPFRLEYNPDSPDAA 120
Query: 93 ---------------TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V I E+ YE N + +M+ +
Sbjct: 121 QTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMSKAL 171
>gi|124268253|ref|YP_001022257.1| flagellar basal body and hook protein [Methylibium petroleiphilum
PM1]
gi|124261028|gb|ABM96022.1| flagellar basal body and hook protein [Methylibium petroleiphilum
PM1]
Length = 242
Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + + ++ A +RQ+ ++ N+ANAST +RA ++ +F +
Sbjct: 1 MDRMIYLSMSGAKATM--QRQETLANNLANASTTGFRA-ELQAFRAV---PVRGDGASTR 54
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNT 93
++G + A + V + GN
Sbjct: 55 VYSLETTTGYDPTPGPM-AATGRALDVAMQGNA 86
>gi|222112272|ref|YP_002554536.1| flagellar basal body flae domain-containing protein [Acidovorax
ebreus TPSY]
gi|221731716|gb|ACM34536.1| flagellar basal body FlaE domain protein [Acidovorax ebreus TPSY]
Length = 531
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N ++ ++ NIAN++T ++A + F ++ A + +
Sbjct: 3 FQQGLSGLNASAKNLDVIGHNIANSNTTGFKASR-TEFAAMIASAIGAASGTNSGIGVEV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S+ + V ++GN
Sbjct: 62 SAIAQQFNQGNLTVTGNSLDVAINGN 87
>gi|307823533|ref|ZP_07653762.1| flagellar basal-body rod protein FlgG [Methylobacter
tundripaludum SV96]
gi|307735518|gb|EFO06366.1| flagellar basal-body rod protein FlgG [Methylobacter
tundripaludum SV96]
Length = 262
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+A + R ++S N+AN +T ++ + + FE ++ QN T
Sbjct: 8 VAKSGLDAQQTRMAVISNNLANVNTTGFK-RGRAVFEDLMYQNIRQVGAQST 58
>gi|114777413|ref|ZP_01452410.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
PV-1]
gi|114552195|gb|EAU54697.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
PV-1]
Length = 148
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 14/139 (10%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFETILN 49
++ I++ + R IV+ENIANA + YR + + F + N
Sbjct: 6 LSSMHISASGMSAQRTRMDIVAENIANAGSTRTSEGGPYRRRQVIFQAVSPAQPFSQVFN 65
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+F + + D V V E+
Sbjct: 66 SSFQSEGQKSVKAAYIAQDKKPFREVYDPSHPDADARGIVKMPNVNPVEEMVDMNSAARS 125
Query: 110 YELNTKLIKKLNSMVMHVV 128
+E N ++ M + +
Sbjct: 126 FEANVTTMEASKRMFLKSL 144
>gi|168698712|ref|ZP_02730989.1| Flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
Length = 144
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 8/112 (7%)
Query: 20 RQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R ++++ NIANA+T YR +D+ E + + +
Sbjct: 23 RMEVIANNIANANTTRSANGGPYRRQDVVFEELLGAAAGPFGGPDLRGVVAVERVEDPTE 82
Query: 74 AHVIEAP--LDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ P D V V + E+ YE N + + M
Sbjct: 83 LPRVHQPGHPDADAEGFVRMPNVQLPIEMVNLLTATRAYEANLRAAQTFRQM 134
>gi|302872562|ref|YP_003841198.1| fagellar hook-basal body protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575421|gb|ADL43212.1| fagellar hook-basal body protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 489
Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVLKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A +D
Sbjct: 69 IGLGVSVASVD 79
>gi|118581848|ref|YP_903098.1| flagellar basal body rod protein [Pelobacter propionicus DSM
2379]
gi|118504558|gb|ABL01041.1| flagellar basal body rod protein [Pelobacter propionicus DSM
2379]
Length = 245
Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+R +S N+AN +TP ++ KD FE++L
Sbjct: 17 KRMDTISNNLANVNTPGFK-KDKMLFESMLAGT 48
>gi|312621577|ref|YP_004023190.1| fagellar hook-basal body protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202044|gb|ADQ45371.1| fagellar hook-basal body protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 488
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVLKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A +D
Sbjct: 69 IGLGVSVASVD 79
>gi|312126828|ref|YP_003991702.1| fagellar hook-basal body protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311776847|gb|ADQ06333.1| fagellar hook-basal body protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 486
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVLKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A +D
Sbjct: 69 IGLGVSVASVD 79
>gi|197104391|ref|YP_002129768.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
HLK1]
gi|196477811|gb|ACG77339.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
HLK1]
Length = 138
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 16/124 (12%)
Query: 9 IASQHANWLSERQKIVSENIANAST----PN---YRAKDISSFETILNQNFLMARTHETH 61
IA+ R +I++EN+ANA++ P YR + + +
Sbjct: 12 IAASALRAQQARMRIIAENLANANSTAKVPGGDPYRRQ-----APVFEPTRVAGAAQGVR 66
Query: 62 LK--ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
+ E D S D V++ V E + YE N +I+
Sbjct: 67 MSRVEPDQSAFRMEYDPGHPSADDRGYVKLP--NVNSLVEAMDMREAQRAYEANLNVIET 124
Query: 120 LNSM 123
+M
Sbjct: 125 ARAM 128
>gi|90418365|ref|ZP_01226277.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
SI85-9A1]
gi|90338037|gb|EAS51688.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
SI85-9A1]
Length = 388
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M F+ + N + R VSENIAN+ST Y+ +L Q +
Sbjct: 1 MSINGVFRTSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLAQGG--GEYNPG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+K + + +Q G
Sbjct: 59 SVKTQVRQSISQQGSIAATSSGSDLAIQGDG 89
>gi|315125986|ref|YP_004067989.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
gi|315014500|gb|ADT67838.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
Length = 261
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 28/78 (35%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ +E+ +SG E + G+ V + +E+ ++
Sbjct: 178 FANPAGLQSLGGNLYRETAASGEPVEGIPGEDAFGGLQQFTIEGSNVSVVDEMVSMIAVQ 237
Query: 108 YLYELNTKLIKKLNSMVM 125
YE+N K++ + M+
Sbjct: 238 RAYEMNAKVVSAADEMLR 255
>gi|220929459|ref|YP_002506368.1| hypothetical protein Ccel_2042 [Clostridium cellulolyticum H10]
gi|219999787|gb|ACL76388.1| protein of unknown function DUF1078 domain protein [Clostridium
cellulolyticum H10]
Length = 454
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ N+AN +T ++A ++ F+ I NQ A + ++ +
Sbjct: 10 SGLKAHQAKMDVIGNNVANVNTLGFKAGRVT-FQEIFNQTLRGAGAPDAATARGGTNPMQ 68
Query: 72 WNAHVIEAPLD 82
+ +D
Sbjct: 69 IGLGIAVGSID 79
>gi|258511381|ref|YP_003184815.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478107|gb|ACV58426.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 335
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A +V NIAN T ++ D+ F +L+Q + T T S
Sbjct: 8 AISGMQAFQTDLDVVGNNIANVETVGFKQSDVQ-FADLLSQTMSLG-TAGTAPNPGTGSS 65
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITN 98
P GVQV+ + ++
Sbjct: 66 GATTGIGGTNPEQVGLGVQVAATQMDMSQ 94
>gi|42526722|ref|NP_971820.1| flagellar basal body rod protein FlgC [Treponema denticola ATCC
35405]
gi|41817037|gb|AAS11731.1| flagellar basal-body rod protein FlgC [Treponema denticola ATCC
35405]
Length = 151
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 21/148 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDI-----------S 42
M T IA+ R ++S NIANAS+ P R++ I +
Sbjct: 1 MGLFTSINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRVIVGQKKSGIDWQT 60
Query: 43 SF--ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
F + + + SD+ ++ H G N V I E+
Sbjct: 61 PFTPQNVERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPN-VNIVTEM 119
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N ++ M +
Sbjct: 120 VDLISASRAYEANLAVVNGAKDMFQRAL 147
>gi|302878277|ref|YP_003846841.1| flagellar basal-body rod protein FlgF [Gallionella
capsiferriformans ES-2]
gi|302581066|gb|ADL55077.1| flagellar basal-body rod protein FlgF [Gallionella
capsiferriformans ES-2]
Length = 247
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A+ + ++Q VSEN+AN +TP +RA +++F + L+ T DS+
Sbjct: 7 TAMTGASHVLQQQAAVSENLANTNTPGFRA-TLNTFRAV----PLVGEGLPTRAFVVDST 61
Query: 69 GLHWNAHVIEAPLDQTTGVQVSG 91
P ++ V V+G
Sbjct: 62 AGFDFTPAAFQPTGRSLDVAVNG 84
>gi|163758009|ref|ZP_02165097.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
gi|162284298|gb|EDQ34581.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
Length = 241
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
L R +++N+ANA+T +RA +I F +L +
Sbjct: 15 LERRMNTLADNVANANTTGFRATEIK-FNEVLADTGV 50
>gi|154710440|gb|ABS84283.1| FlgG-2 [Treponema paraluiscuniculi]
Length = 271
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ SG A E P V+ S V + NE+ + + YE N K I+ + M
Sbjct: 202 QTPVSGAPIAAEGPERPAAVQGFVEAS--NVNVVNEMVRMIEVNRAYEANQKTIQAEDGM 259
Query: 124 V 124
+
Sbjct: 260 M 260
>gi|46202330|ref|ZP_00053401.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
magnetotacticum MS-1]
Length = 205
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-FLMARTHETHLKESDSSGL 70
Q +W +S+NIAN +T Y+ KD + F+T+L+++ A T + K + ++GL
Sbjct: 2 QSMDWA---MGSISQNIANVNTTGYKEKD-TLFKTVLSESHTAPASTQNSPNKNTATTGL 57
Query: 71 HW 72
Sbjct: 58 DI 59
>gi|222530130|ref|YP_002574012.1| hypothetical protein Athe_2164 [Caldicellulosiruptor bescii DSM
6725]
gi|222456977|gb|ACM61239.1| protein of unknown function DUF1078 domain protein
[Caldicellulosiruptor bescii DSM 6725]
Length = 488
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVLKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A +D
Sbjct: 69 IGLGVSVASVD 79
>gi|187935497|ref|YP_001885039.1| flagellar basal body rod protein FlgC [Clostridium botulinum B str.
Eklund 17B]
gi|187723650|gb|ACD24871.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B str.
Eklund 17B]
Length = 135
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 9/134 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIAN------ASTPNYRAKDISSFETILNQNFLM 54
M T QI++ + R ++ N+ N A + I+ F+ L++N M
Sbjct: 1 MNAFTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKM 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
A + E S + + V + NE+ YE N
Sbjct: 61 AGIKPVKIVEDKSPLRKVYKPTHPDADETGYVTMPN---VNVLNEMADMMVSTRSYEANV 117
Query: 115 KLIKKLNSMVMHVV 128
+ + L M +
Sbjct: 118 ETLNALKGMFSKAL 131
>gi|148380612|ref|YP_001255153.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
3502]
gi|153934204|ref|YP_001384898.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
19397]
gi|153936013|ref|YP_001388367.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
gi|148290096|emb|CAL84215.1| flagellar hook protein [Clostridium botulinum A str. ATCC 3502]
gi|152930248|gb|ABS35748.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
19397]
gi|152931927|gb|ABS37426.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
Length = 345
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTKLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 74
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 75 GIFTKFTTGNMQTTGRNLDM 94
>gi|90577342|ref|ZP_01233153.1| flagellar basal body rod protein [Vibrio angustum S14]
gi|90440428|gb|EAS65608.1| flagellar basal body rod protein [Vibrio angustum S14]
Length = 144
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 16/142 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + IA N + R V+ N+ANA PN K + F T+ N+ L
Sbjct: 1 MAFTDIYSIAGSAMNAQTIRLNTVASNLANADAVAANPNDAYKALKPVFATVYNKTQLTG 60
Query: 56 ------RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSGHIK 107
+ +G PL G + + E+
Sbjct: 61 DQADYPSAEVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPD---IDVVAEMADMMSAT 117
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM ++R
Sbjct: 118 RSFETNVEVLSNVKSMQQGLLR 139
>gi|15639945|ref|NP_219398.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026184|ref|YP_001933956.1| flagellar basal-body rod protein [Treponema pallidum subsp.
pallidum SS14]
gi|3323282|gb|AAC65916.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018759|gb|ACD71377.1| flagellar basal-body rod protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060316|gb|ADD73051.1| flagellar basal-body rod protein [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 271
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ SG A E P V+ S V + NE+ + + YE N K I+ + M
Sbjct: 202 QTPVSGAPIAAEGPERPAAVQGFVEAS--NVNVVNEMVRMIEVNRAYEANQKTIQAEDGM 259
Query: 124 V 124
+
Sbjct: 260 M 260
>gi|83312595|ref|YP_422859.1| flagellar basal body rod protein [Magnetospirillum magneticum
AMB-1]
gi|82947436|dbj|BAE52300.1| Flagellar basal body rod protein [Magnetospirillum magneticum
AMB-1]
Length = 253
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQ ++ ++ Q A W ++V+ N+ANA+TP ++ +++ F L R
Sbjct: 8 MQNTSYIALSRQAALWRQ--MEVVANNMANANTPAFKGEEMM-FREFLVPTRSSERAVGG 64
Query: 61 HLK 63
L
Sbjct: 65 KLS 67
>gi|289208116|ref|YP_003460182.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
K90mix]
gi|288943747|gb|ADC71446.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
K90mix]
Length = 262
Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ARTHETHLKES 65
IA + R VS N+AN +T ++ KD + FE ++ Q T + L
Sbjct: 7 IAKTGLDAQHTRMSTVSNNLANVNTTGFK-KDRAVFEDLIYQTVRQPGAQATQDQQLPSG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
G A E Q Q N++ + E
Sbjct: 66 LQIGTGVRAVSTEKMFTQGNLQQTD-NSLDVAIE 98
>gi|83944175|ref|ZP_00956631.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
gi|83955124|ref|ZP_00963780.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
gi|83840453|gb|EAP79626.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
gi|83845042|gb|EAP82923.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
Length = 122
Score = 36.8 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 14 ANWLSERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHETHLKESD 66
+R +IVSEN+ANAS T Y+ K I SFE+ + + A + D
Sbjct: 1 MRAQGDRLRIVSENLANASSTAQTAGGDPYQRKTI-SFESATDPSTGAAIVQSAGV-LRD 58
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+ DQ +++ V E+ YE N ++ K M
Sbjct: 59 DADFTLRYEPSHPAADQNGYIKMP--NVNPLIEMSNMREAARSYEANLSMLDKARDMRRQ 116
Query: 127 VV 128
+V
Sbjct: 117 LV 118
>gi|167630298|ref|YP_001680797.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
gi|167593038|gb|ABZ84786.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
Length = 442
Score = 36.8 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 16/125 (12%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS--GL 70
R + NIAN +T ++ ++ F LNQ A + + ++ GL
Sbjct: 11 ALRNHQTRMDTIGNNIANVNTIGFKKSRVT-FADALNQTIRGASSPQGGRGGTNPMQVGL 69
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE-----LYKSGHIKY-----LYELNT--KLIK 118
N +E + N+ + E L G +Y ++L+T I+
Sbjct: 70 GMNIATMETVFTPASVQGTGKNS-DLAIEGDGFFLLDDGGARYYTRAGNFDLDTEYNFIR 128
Query: 119 KLNSM 123
N M
Sbjct: 129 TDNGM 133
>gi|330721006|gb|EGG99167.1| Flagellar basal-body rod protein FlgG [gamma proteobacterium
IMCC2047]
Length = 261
Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
Query: 23 IVSENIANASTPNY-----RAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
++S +A +STP A+ I+ L T + + + GL +
Sbjct: 156 VISATVAGSSTPTQIGDIQLAEFINPTGLQAIGGNLYKETAASGTPTTGTPGLSGRGTIE 215
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ L+ + V I EL + YE+NTK+I + M+ V +
Sbjct: 216 QGVLENS--------NVNIVEELVDMITTQRAYEMNTKVISTSDQMLQFVTQ 259
>gi|239628984|ref|ZP_04672015.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239519130|gb|EEQ58996.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 541
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ ++ NIAN +T +++ + F+ + Q A + + + +++S + +
Sbjct: 1 MQAHQTKLDVIGNNIANVNTYGFKSSR-ARFQDVYYQTLQSATSGDNNRGGTNASQVGYG 59
Query: 74 AHVI------EAPLDQTTGVQVSGNTVGITNE 99
A + E Q+TG + V IT E
Sbjct: 60 AQLAGIDLNMERSALQSTGRPMD---VAITGE 88
>gi|169831913|ref|YP_001717895.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
audaxviator MP104C]
gi|169638757|gb|ACA60263.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
audaxviator MP104C]
Length = 139
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 36/135 (26%), Gaps = 8/135 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYR-----AKDISSFETILN--QNFL 53
M F I+ R ++S NIANA T R +++ F L +
Sbjct: 1 MSLFKSFGISGSGMTAERLRLDLISNNIANAHTTRTREGGPYRREVPVFAQYLERFRGRG 60
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
A H E P G N V + E YE N
Sbjct: 61 FAGAGVRVTAVVKDPSPLRAVHEPEHPDADAAGFVQYPN-VDLNREFVDLMGASRAYEAN 119
Query: 114 TKLIKKLNSMVMHVV 128
MV +
Sbjct: 120 AAAFDAAKQMVQRAL 134
>gi|149195335|ref|ZP_01872422.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
gi|149134527|gb|EDM23016.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
Length = 869
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SG 69
N + + NIAN +T ++ ++F+ +L+Q A + L +S G
Sbjct: 10 SGLNAHQIAMDVEANNIANVNTVGFKYSR-TNFQNLLSQTIKSATAPQGDLGGKNSLQVG 68
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNT 93
L +E Q + NT
Sbjct: 69 LGATVSSVETMFKQGSIQNTDKNT 92
>gi|331269312|ref|YP_004395804.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
BKT015925]
gi|329125862|gb|AEB75807.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
BKT015925]
Length = 145
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 21/145 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN--------YRAKDISSFETILNQNF 52
M + +I++ + R +S NI N T YR + I+ F+ +
Sbjct: 1 MNAFSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGQKEPYR-RKIAVFQENFKKEL 59
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-----SGN----TVGITNELYKS 103
++ + S + ++PL + G V I NE+
Sbjct: 60 GK---NKKGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADM 116
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVV 128
YE N I +M M +
Sbjct: 117 IAATRAYEANVTAINSSKNMFMKAL 141
>gi|121607560|ref|YP_995367.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
EF01-2]
gi|121552200|gb|ABM56349.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
EF01-2]
Length = 246
Score = 36.8 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A + RQ +++ N+AN ST +RA+ +S+F ++ +SG +
Sbjct: 12 AGAAAYRQAVLANNLANISTGGFRAQ-LSTFRSV---PLQGDGAKTRVFALEATSGYDDS 67
Query: 74 AHVIE 78
A ++
Sbjct: 68 AGPVQ 72
>gi|121596117|ref|YP_988013.1| hypothetical protein Ajs_3830 [Acidovorax sp. JS42]
gi|120608197|gb|ABM43937.1| protein of unknown function DUF1078 domain protein [Acidovorax
sp. JS42]
Length = 538
Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N ++ ++ NIAN++T ++A + F ++ A + +
Sbjct: 3 FQQGLSGLNASAKNLDVIGHNIANSNTTGFKASR-TEFAAMIASAIGAASGTNSGIGVEV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S+ + V ++GN
Sbjct: 62 SAIAQQFNQGNLTVTGNSLDVAINGN 87
>gi|30248320|ref|NP_840390.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
gi|30138206|emb|CAD84214.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
Length = 134
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDISSFETILNQNFLM 54
M + F +A S+R +V+ N+ANA + YR++ + F TI
Sbjct: 1 MSLFSVFNVAGSSMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVV-FRTIDVTADKA 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ S ++ + N V E+ Y+ +
Sbjct: 60 KGVKVAGVVNDPSPMRVVYDPKHPMANEKGYVTLPNVNVVD---EMVNMMSASRSYQNSV 116
Query: 115 KLIKKLNSMVMHVVR 129
++ +++ +
Sbjct: 117 DMMNVTKTLLQKALT 131
>gi|319650827|ref|ZP_08004964.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
gi|317397425|gb|EFV78126.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
Length = 275
Score = 36.8 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKD-------ISSFETILNQNFLMARTHETH 61
A+ L ++ IVS N+AN T Y+ ++ F N N AR
Sbjct: 7 TATNTLAQLQKQMDIVSHNVANIDTAGYKRREANFTDLLFQQFNNQRNPNAETARLTPAG 66
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+++ + L + V++ + T +
Sbjct: 67 IRQGVGAKLAQSQIVMKQGALKATERPLD 95
>gi|167645332|ref|YP_001682995.1| flagellar basal body rod protein FlgC [Caulobacter sp. K31]
gi|167347762|gb|ABZ70497.1| flagellar basal-body rod protein FlgC [Caulobacter sp. K31]
Length = 140
Score = 36.8 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 38/135 (28%), Gaps = 24/135 (17%)
Query: 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH 61
Q + IA+ R ++++ENIANA++ + R
Sbjct: 7 QSMATMAIAASALKAQQGRMRVIAENIANANS-----------TARVAGGDPYRRQVPVF 55
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS-GN------------TVGITNELYKSGHIKY 108
+ G P + G GN V E +
Sbjct: 56 KPTTLKGGGEGVVMAKVDPDMKDFGTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEAQR 115
Query: 109 LYELNTKLIKKLNSM 123
YE N +I+ +M
Sbjct: 116 AYEANMNVIETSRAM 130
>gi|309779447|ref|ZP_07674208.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
gi|308921688|gb|EFP67324.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
Length = 404
Score = 36.8 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH--ETHLKE 64
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A + +
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQIGQGVSV 61
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ S +V + SG
Sbjct: 62 TKVSQAFTQGNVTITGNPLDIAINGSG 88
>gi|219670134|ref|YP_002460569.1| hypothetical protein Dhaf_4124 [Desulfitobacterium hafniense
DCB-2]
gi|219540394|gb|ACL22133.1| protein of unknown function DUF1078 domain protein
[Desulfitobacterium hafniense DCB-2]
Length = 426
Score = 36.8 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+ +V NIAN +T ++ ++ F T+L+Q A + + ++ + + + V
Sbjct: 15 HQIKMDVVGNNIANVNTTGFKRSRVT-FSTMLSQTMKGAGSPSANQGGTNPAQVGLGSMV 73
Query: 77 IEAPLDQTTGVQVSGNT 93
+ +DQ S NT
Sbjct: 74 --SSIDQIMTTGSSQNT 88
>gi|332525065|ref|ZP_08401245.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
JA2]
gi|332108354|gb|EGJ09578.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
JA2]
Length = 240
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
M + + + A ERQ +++ N+ANAST +RA ++ +F +
Sbjct: 1 MDRLIYLSMGGAKATM--ERQDVLANNLANASTTGFRA-ELQAFRAV 44
>gi|23015787|ref|ZP_00055554.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
magnetotacticum MS-1]
Length = 246
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQ ++ ++ Q A W ++V+ N+ANA+TP ++ +++ F L R
Sbjct: 1 MQNTSYIALSRQAALWRQ--MEVVANNMANANTPAFKGEEMM-FREFLVPTRSSERAIGG 57
Query: 61 HLK 63
L
Sbjct: 58 KLA 60
>gi|300870897|ref|YP_003785768.1| flagellar hook-basal body complex protein FlhO [Brachyspira
pilosicoli 95/1000]
gi|300688596|gb|ADK31267.1| flagellar hook-basal body complex protein, FlhO [Brachyspira
pilosicoli 95/1000]
Length = 282
Score = 36.8 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R +V+ N+AN P ++ +D ++F+ + ART + + +V
Sbjct: 18 RLDVVANNLANVDKPGFK-RDTATFKAF--PEMMAARTEDDGVVIFPLGSTDIRPYV 71
>gi|170756722|ref|YP_001782271.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
gi|169121934|gb|ACA45770.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
Length = 344
Score = 36.8 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTKLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 74
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 75 GIYTKFTTGNMQTTGRNLDM 94
>gi|182679722|ref|YP_001833868.1| flagellar basal body rod protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635605|gb|ACB96379.1| flagellar basal body rod protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 240
Score = 36.8 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQN----FLMARTHETHLKESDS 67
L R ++ NIAN S YRA+D+ +F TIL++ A T TH+
Sbjct: 15 LERRLTTIATNIANQSVAGYRAEDV-NFSTILSKTDKYPVAYAGTGRTHISREAG 68
>gi|312135845|ref|YP_004003183.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
OL]
gi|311775896|gb|ADQ05383.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
OL]
Length = 489
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 10 SALRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVVKSASAPDTASGRGGSNPMQ 68
Query: 72 WNAHVIEAPLD 82
V A D
Sbjct: 69 IGLGVSVASAD 79
>gi|242278628|ref|YP_002990757.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
2638]
gi|242121522|gb|ACS79218.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
2638]
Length = 147
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 21/146 (14%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS--------SFET 46
M T I + E +VS N+ANA T YR K +S FET
Sbjct: 1 MNFFTALDIGASGLKAQREYLNVVSMNMANAKTTRTAEGGPYRRKSVSMESSPVLSPFET 60
Query: 47 ILNQNF---LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKS 103
+NQ L T + ++ + + +A N V E+
Sbjct: 61 AMNQQLNQQLRGVTVRGIVSDTRPFKEVYEPNHPDADKKGIVRY-PDINVV---EEMVNM 116
Query: 104 GHIKYLYELNTKLIKKLNSMVMHVVR 129
I YE N + + M +R
Sbjct: 117 ITISRSYEANAQAVDSAKRMFNRALR 142
>gi|153948570|ref|YP_001399634.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP
31758]
gi|152960065|gb|ABS47526.1| flagellar hook protein flgE [Yersinia pseudotuberculosis IP
31758]
Length = 402
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
F IA+ N +E+ +S NIAN++T ++A + F ++ Q+ + T
Sbjct: 3 FSIANTALNAHTEQLNTISNNIANSATKGFKASR-TEFASMYAQSQPLGVT 52
>gi|224373467|ref|YP_002607839.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
gi|223588607|gb|ACM92343.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
Length = 853
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SG 69
N + + NIAN +T ++ ++F+ +L+Q A + L +S G
Sbjct: 10 SGLNAHQIAMDVEANNIANVNTVGFKYSR-TNFQNLLSQTVKSATAPQGDLGGKNSLQIG 68
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNT 93
L + +E Q + NT
Sbjct: 69 LGTSVSAVETMFKQGSIQNTDKNT 92
>gi|86153269|ref|ZP_01071473.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|121612733|ref|YP_001000227.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005182|ref|ZP_02270940.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 81-176]
gi|85842995|gb|EAQ60206.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87250029|gb|EAQ72987.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 164
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIANA+T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K S + + N
Sbjct: 61 QINKDNNFLKYENPLNDPSSPEEAKPPIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ +
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159
>gi|187778746|ref|ZP_02995219.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
15579]
gi|187772371|gb|EDU36173.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
15579]
Length = 153
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 14/139 (10%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
I F A+ LS R ++ NIANA+T Y+ K E + N+
Sbjct: 11 IKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVFEENLNNELNKK 70
Query: 55 ARTHETHLKESDSSGLHWNAHVIE-----APLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
T+E L ++G+ ++ + + D VS V + NE+
Sbjct: 71 NGTNEKKLYGVKATGIVEDSSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVRT 130
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE + ++ SM +
Sbjct: 131 YEASVTVMNAEKSMFGKAL 149
>gi|54297180|ref|YP_123549.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
Paris]
gi|53750965|emb|CAH12376.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
Paris]
Length = 140
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 6 FFQIASQHANWLSERQKIVSENIANAS----TPN--YRAKDISSFETILNQNFL------ 53
F IA+ + R + N++NA+ +P+ Y+AK F+++
Sbjct: 6 IFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAK-YPVFKSVQENANQWIGEQI 64
Query: 54 MARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
A + +SD+ + N V E+ Y++N
Sbjct: 65 KAGVKLDGIYQSDAEPHRRYDPNSPIADKDGFVYTSNINYV---EEMANIISASRSYQMN 121
Query: 114 TKLIKKLNSMVMHVVR 129
+L+ ++ ++
Sbjct: 122 IELLNTTKQLMQRTLQ 137
>gi|295097201|emb|CBK86291.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 260
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA ++S N+AN +T ++ + + F+ +L Q + + + S
Sbjct: 7 IAKTGLEAQQTNMDVISNNLANVNTNGFKRQR-AVFQDLLYQTMRQPGAQASE-QTTLPS 64
Query: 69 GLHWNAHVIEAPLDQTT---GVQVSGNTVGITNE 99
GL V + G+ ++GN + E
Sbjct: 65 GLQLGTGVRPVSTQRVHTQGGLNMTGNDTDVAIE 98
>gi|329849687|ref|ZP_08264533.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
C19]
gi|328841598|gb|EGF91168.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
C19]
Length = 138
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 13/113 (11%)
Query: 18 SERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
R ++ +ENIANAS TP YR + I F++ R + +
Sbjct: 22 QARMRVTAENIANASSLGTTPGADPYR-RQIPVFQSTNIDGATGVRLARVVPDMKEFATE 80
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ +H V E + YE N +I+ M
Sbjct: 81 YDPSHPAADAQGYVKRP-----NVDTLTESMDMREAQRAYEANLNVIETARDM 128
>gi|182412221|ref|YP_001817287.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
gi|177839435|gb|ACB73687.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
Length = 261
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 26/80 (32%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A+ ++ N+AN +TP ++ I + + + + T +
Sbjct: 8 AATGMEAQQLNLNTIANNLANVNTPGFKRSKIEFQDLLYQKPTRASGTDSGGGNIVPTGL 67
Query: 70 LHWNAHVIEAPLDQTTGVQV 89
N + A T Q+
Sbjct: 68 EVGNGSRVAATSKVFTQGQL 87
>gi|17508539|ref|NP_492321.1| abnormal DAuer Formation family member (daf-8) [Caenorhabditis
elegans]
gi|3878879|emb|CAA99889.1| C. elegans protein R05D11.1, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 546
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 42 SSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-TVGITNEL 100
SSF ++L Q+ + + SS A E +GN T+ + E+
Sbjct: 228 SSFASLLQQSNRQDDEEPGYYRSGLSSPASHAASPRE--------FIPNGNDTISLDQEM 279
Query: 101 YKSGHIK-YLYELN 113
+ ++ N
Sbjct: 280 MDDSEVSDIMHSEN 293
>gi|146296289|ref|YP_001180060.1| hypothetical protein Csac_1266 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409865|gb|ABP66869.1| protein of unknown function DUF1078 domain protein
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 484
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R ++ +NIAN +T +++ ++ F ++ A +T S+ +
Sbjct: 12 LRAHQTRMDVIGDNIANVNTVGFKSSRVT-FASVFASVIKAASAPDTTSGRGGSNPMQIG 70
Query: 74 AHVIEAPLD 82
V A +D
Sbjct: 71 LGVSVASVD 79
>gi|115353118|ref|YP_774957.1| flagellar hook protein FlgE [Burkholderia ambifaria AMMD]
gi|115283106|gb|ABI88623.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
AMMD]
Length = 413
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + SS +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTALSSVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|292492365|ref|YP_003527804.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
Nc4]
gi|291580960|gb|ADE15417.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
Nc4]
Length = 261
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
IA + R ++S N+AN +T ++ + + FE +L Q +
Sbjct: 7 IAKTGLDAQQTRMAVISNNLANVNTTGFK-RGRAVFEDLLYQTVRQPGAQSS 57
>gi|295678058|ref|YP_003606582.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
gi|295437901|gb|ADG17071.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
Length = 510
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A + + + S + +
Sbjct: 19 VIGNNIANANTVGFKSGT-AEFADMYANSVATATSQQIGIGTKLSEVQQQFSQGTITTTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALNVAINGN 87
>gi|237817502|ref|ZP_04596493.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
gi|237787337|gb|EEP61554.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
Length = 456
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 3 PITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
P++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 60 PMSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NS 117
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 118 GSVLTDVRYGISDQGGIR--STSSTTDLAIDGN 148
>gi|158422258|ref|YP_001523550.1| flagellar basal body rod protein FlgG [Azorhizobium caulinodans
ORS 571]
gi|158329147|dbj|BAF86632.1| flagellar basal-body rod FlgG protein [Azorhizobium caulinodans
ORS 571]
Length = 262
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ N ++++ NIAN +T ++ + + F +L Q+
Sbjct: 1 MRALAIAATGMNAQQTNVEVIANNIANINTTGFK-RARAEFSDLLYQSERTQGIPNRDGG 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
++ G V L + +GNT+ +
Sbjct: 60 QAIPEGAMLGLGVRTVGIRNLHTQGPLTQTGNTLDL 95
>gi|103488388|ref|YP_617949.1| flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
gi|98978465|gb|ABF54616.1| Flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
Length = 247
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETI-LNQNFLMART 57
RQ ++ N+ANA TP +RA D++S +++ L+ + L AR
Sbjct: 10 SAMRGSMARQTAIANNLANAQTPGFRA-DMASAQSLWLDGSGLDARA 55
>gi|170758711|ref|YP_001787975.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
Maree]
gi|169405700|gb|ACA54111.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
Maree]
Length = 345
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTKLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 74
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 75 GIYTKFTTGNMQTTGRNLDM 94
>gi|169831934|ref|YP_001717916.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
audaxviator MP104C]
gi|169638778|gb|ACA60284.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
audaxviator MP104C]
Length = 532
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDIS-------SFETILNQNFLMARTHET 60
+IA + + + + NIAN +TP Y+ ++ ++ ++ + T +
Sbjct: 7 EIARRSLHGHQQAMNTTAHNIANINTPGYKRQEAVLQSTPAIAYPSVFSPRPGQLGTGMS 66
Query: 61 HLKESDSSGLHWNAHVIEAP 80
++ S + + V EA
Sbjct: 67 AVEIKRYSDAYLDRQVREAQ 86
>gi|119953092|ref|YP_945301.1| flagellar basal body rod protein FlgC [Borrelia turicatae 91E135]
gi|119861863|gb|AAX17631.1| flagellar basal-body rod protein FlgC [Borrelia turicatae 91E135]
Length = 152
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 45/152 (29%), Gaps = 29/152 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTP------NYRAKDIS------------ 42
M + A+ R +++ NIAN T +YR + I
Sbjct: 1 MGLFSSINTAATGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRIVFSPRVVSPYWKG 60
Query: 43 SFETILNQNFLMARTHETHLKESDS------SGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
F N + ++ S H +A I++ + + N V
Sbjct: 61 PFVPDYLDNGIGQGVRVAGIERDKSPLKLKYDPTHPDA--IKSGERKGYVEFPNVNAV-- 116
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N+ +I ++ +
Sbjct: 117 -EEMVDMISASRAYEANSTVINSSKAIFRSAL 147
>gi|254251191|ref|ZP_04944509.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
gi|124893800|gb|EAY67680.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
Length = 413
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S A +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTTLASVQQQFAQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|238796905|ref|ZP_04640409.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
43969]
gi|238719165|gb|EEQ10977.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
43969]
Length = 251
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 16/99 (16%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-LNQNFLMART--------HE 59
A AN RQ +VS N+ANAST +RA+ +S+F + + + RT H+
Sbjct: 7 TAMGAANAALNRQGVVSNNLANASTTGFRAQ-LSAFRAVPVEGPSVQTRTLVTESTPYHD 65
Query: 60 THLKESDSSGLHWNAHVIEAP------LDQTTGVQVSGN 92
+ + +G + + + + D G +GN
Sbjct: 66 DSMGAINQTGRNLDVALPQDGWLAVELPDGGEGYTRAGN 104
>gi|317121822|ref|YP_004101825.1| flagellar hook-basal body protein [Thermaerobacter marianensis
DSM 12885]
gi|315591802|gb|ADU51098.1| flagellar hook-basal body protein [Thermaerobacter marianensis
DSM 12885]
Length = 406
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++ NIAN +T +++ ++ F+ + NQ A ++ +
Sbjct: 10 SGLQNHQLRMDVIGNNIANVNTVGFKSSRVT-FKELFNQTLRGAAA-PAGPTRGGTNPIQ 67
Query: 72 WNAHVIEAPLD---QTTGVQVSGNTVGITNE 99
A +D Q QV+G + +
Sbjct: 68 IGLGTALAGIDVIHQPGNPQVTGVATDLAIQ 98
>gi|289679031|ref|ZP_06499921.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
syringae FF5]
Length = 124
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 16/120 (13%)
Query: 25 SENIANASTPN------YRAKDISSFETILNQNFLMART----HETHLKESDSSGLHWNA 74
+ NIANA T + YRA+ F T++ + + +G+ ++
Sbjct: 3 ASNIANAETVSSSMDQTYRARH-PVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIEDS 61
Query: 75 HVIEAPLDQTT-GVQVSGN----TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+EA + G V + E+ ++ N +++ SM+ V+
Sbjct: 62 SNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLT 121
>gi|253702433|ref|YP_003023622.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
gi|251777283|gb|ACT19864.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
Length = 237
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
R ++S N+AN++T ++A D FE++L +T
Sbjct: 15 AQRRLDVISNNLANSNTAGFKA-DQIQFESVLANVKNPTQT 54
>gi|218781795|ref|YP_002433113.1| hypothetical protein Dalk_3959 [Desulfatibacillum alkenivorans
AK-01]
gi|218763179|gb|ACL05645.1| Putative flagellar basal body rod protein [Desulfatibacillum
alkenivorans AK-01]
Length = 117
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 35/117 (29%), Gaps = 13/117 (11%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
N + + + N AN T Y+ M+ ++
Sbjct: 10 SALNAYGRKFQSTANNTANIDTDGYK-----------KTRVTMSEAANGSVEAKSEKVNS 58
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ V E + + V+ S V + E+ YE N +K + M+ +
Sbjct: 59 PSPIVSELTSEGSVLVEKS--NVDLAQEVTNQILAARGYEANLASVKAFDEMLGSTL 113
>gi|114798876|ref|YP_758980.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC
15444]
gi|114739050|gb|ABI77175.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC
15444]
Length = 483
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDI 41
A S++ +IV+ N+ANASTP Y + +
Sbjct: 10 ARSGLQVTSQKAEIVATNVANASTPGYVRRSL 41
>gi|126176154|ref|YP_001052303.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
gi|304412506|ref|ZP_07394112.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
gi|307307165|ref|ZP_07586903.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
gi|125999359|gb|ABN63434.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
gi|304349148|gb|EFM13560.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
gi|306910404|gb|EFN40835.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
Length = 261
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 38 AKDISSFETILNQNFLMARTHETHL-KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+D+ + N +L +E+ +SG+ + L + G V +
Sbjct: 167 PQDLGQITLVNFTNPAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNV 226
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVM 125
E+ + + YE+N K++ + M+
Sbjct: 227 VEEMVEMISTQRAYEMNAKVVSASDDMLK 255
>gi|91776309|ref|YP_546065.1| flagellar hook protein FlgE [Methylobacillus flagellatus KT]
gi|91710296|gb|ABE50224.1| protein of unknown function DUF1078-like protein [Methylobacillus
flagellatus KT]
Length = 410
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ +++ N+ANAST ++ + + F + + + +
Sbjct: 3 FQQGLSGLNAASKNIEVIGNNVANASTVGFK-QSRTEFADVYANSLGGGNASKIGIGTKI 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ + V ++GN
Sbjct: 62 AAITQQFTQGNISNSQNPLDVAINGN 87
>gi|299066527|emb|CBJ37717.1| Putative flagellar component of cell-proximal portion of
basal-body rod (flgF) [Ralstonia solanacearum CMR15]
Length = 254
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 4/93 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTH 58
MQ I ++S H + R V+ N+AN STP Y+ + F ++++ A
Sbjct: 1 MQEIFAVTLSSMHQDM--ARLDGVALNLANVSTPGYKRGVVAVQPFSSVVDAVAGQAGAR 58
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ V + G
Sbjct: 59 AEDMNGVQVMSDMRPGTVKLTGEPMDVALAGDG 91
>gi|83594174|ref|YP_427926.1| hypothetical protein Rru_A2842 [Rhodospirillum rubrum ATCC 11170]
gi|83577088|gb|ABC23639.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 245
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ ++ ++ Q A W +VS N+AN +T Y+A+ E ++N T ++
Sbjct: 1 MENTSYIALSRQTALWRQL--DVVSNNLANMNTNGYQAEQTLFSEYLMN-------TRDS 51
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
H + + +A +GN + +
Sbjct: 52 HFRLPEKLAYTQDAGTYRDLTAGPLE--HTGNPLDL 85
>gi|315122284|ref|YP_004062773.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495686|gb|ADR52285.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 422
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + + A + S R VS+NIAN +T Y+ + SF +++ T
Sbjct: 1 MGILGTMKTAMSGMDAQSNRVSAVSDNIANVNTIGYK-RTAVSFSSLVFPPAAGCHTSGG 59
>gi|169826608|ref|YP_001696766.1| flagellar hook-basal body complex protein [Lysinibacillus
sphaericus C3-41]
gi|168991096|gb|ACA38636.1| Flagellar hook-basal body complex protein [Lysinibacillus
sphaericus C3-41]
Length = 280
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 18 SERQKIVSENIANASTPNYRA--KDISSFETIL 48
R +++S N+ANA+TP ++A I SF +L
Sbjct: 19 QRRTELLSNNLANANTPGFKADQSTIRSFPDML 51
>gi|153940920|ref|YP_001391955.1| flagellar hook protein flgE [Clostridium botulinum F str.
Langeland]
gi|152936816|gb|ABS42314.1| flagellar hook protein flgE [Clostridium botulinum F str.
Langeland]
gi|295319974|gb|ADG00352.1| flagellar hook protein flgE [Clostridium botulinum F str. 230613]
Length = 345
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ IV NIANA+T ++++ I F+ +L+QN A +L ++ + V
Sbjct: 16 QTKLDIVGNNIANANTTAFKSQSIR-FQDMLSQNMSSATGPSANLGGTNPRQVGLGVQVA 74
Query: 78 EAPLDQTTG-VQVSGNTVGI 96
TTG +Q +G + +
Sbjct: 75 GIYTKFTTGNMQTTGRNLDM 94
>gi|89072317|ref|ZP_01158896.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
gi|89051849|gb|EAR57301.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
Length = 144
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 10/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + IA N + R V+ N+ANA P+ K + F T+ N+ L
Sbjct: 1 MAFTDIYSIAGSAMNAQTIRLNTVASNLANADAVAANPDDAYKALKPVFATVYNKTQLTG 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLY 110
+ E + +A E + + + V + E+ +
Sbjct: 61 EQADYPSAEVRIMDVVQHAGDAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSF 120
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N +++ + SM ++R
Sbjct: 121 ETNVEVLSNVKSMQQGLLR 139
>gi|310816831|ref|YP_003964795.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
Y25]
gi|308755566|gb|ADO43495.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
Y25]
Length = 261
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ R +++S N+AN +T Y + + F + Q A T
Sbjct: 1 MRILDIAATGMLAQQTRVEVISNNLANMNTTAYNPRR-AEFADLHYQQVQRAGTVAATDG 59
Query: 64 ESDSSGLHWNAHVIE---APLDQTTGVQVSGNTVGITNE 99
+G+ V +P+ VQ +G ++ + E
Sbjct: 60 TILPTGIQLGMGVRTTAVSPMLGQGAVQETGGSLDVAIE 98
>gi|295688784|ref|YP_003592477.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
21756]
gi|295430687|gb|ADG09859.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
21756]
Length = 262
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ + +++S NIAN +T ++ + + F+ +L Q A + +
Sbjct: 1 MQALRTAASGMSAQQLNVEVISNNIANMNTVGFKRQR-AEFQDLLYQTIERAGSQSSSDG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG 86
+G+ V + + T
Sbjct: 60 NIVPTGVQVGGGVKAGSVYRITE 82
>gi|225628428|ref|ZP_03786462.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
gi|225616274|gb|EEH13322.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
Length = 456
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 3 PITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
P++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 60 PMSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NS 117
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 118 GSVLTDVRYGISDQGGIR--STSSTTDLAIDGN 148
>gi|225619854|ref|YP_002721111.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
WA1]
gi|225214673|gb|ACN83407.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
WA1]
Length = 264
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---RTHETHLKES 65
A+ N + + ++ N+AN +T Y+ K + FE ++ QN + T +T
Sbjct: 7 TAASGMNGMQFKTDTIANNLANVNTIGYK-KVRADFEDLIYQNLKIQGTPATEDTVTPVG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+GL + + DQ +Q +GN + + E
Sbjct: 66 LQTGLGVKSAATQKMFDQ-GSLQATGNKLDLALE 98
>gi|170694390|ref|ZP_02885544.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
gi|170140813|gb|EDT08987.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
Length = 127
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 38/126 (30%), Gaps = 12/126 (9%)
Query: 14 ANWLSERQKIVSENIANAS-TPN-----YRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ S+R + + N+ANA T Y+AK + + + + +
Sbjct: 1 MSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVF--GVAPIGGARTGSGQQVGGVQVT 58
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + A G V E+ Y+ N + + ++
Sbjct: 59 GVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTL 118
Query: 124 VMHVVR 129
++ +
Sbjct: 119 MLKTLT 124
>gi|329898287|ref|ZP_08272370.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
IMCC3088]
gi|328920852|gb|EGG28295.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
IMCC3088]
Length = 261
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
+A R +++ N+AN +T ++ KD + FE +L QN
Sbjct: 7 VAKTGLTAQQMRMTVIANNLANVNTVGFK-KDRAVFEDLLYQNVRQPGASA 56
>gi|313901443|ref|ZP_07834901.1| fagellar hook-basal body protein [Thermaerobacter subterraneus
DSM 13965]
gi|313468293|gb|EFR63749.1| fagellar hook-basal body protein [Thermaerobacter subterraneus
DSM 13965]
Length = 406
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
R ++ NIAN +T Y++ ++ F+ + NQ A
Sbjct: 10 SGLQNHQLRMDVIGNNIANVNTVGYKSSRVT-FKELFNQTLRGASA 54
>gi|302671949|ref|YP_003831909.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
proteoclasticus B316]
gi|302396422|gb|ADL35327.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
proteoclasticus B316]
Length = 276
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A+ N +S N+AN +T Y+A+ + F+++L Q T + +S
Sbjct: 8 AATGMNAQQTNVDTISNNLANVNTAGYKAQG-AQFKSLLYQELQTVTTTANGAPKPVTSQ 66
Query: 70 LHWNAHVI 77
+ V
Sbjct: 67 VGLGTRVA 74
>gi|241589577|ref|YP_002979602.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
gi|240868289|gb|ACS65948.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
Length = 641
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 12/79 (15%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+ I + +++ NIAN +TP Y +++ + + H
Sbjct: 4 SLLNIGASGLRTAGIHLQVIGSNIANVNTPGYSRQEV------------VQTENPPHYGG 51
Query: 65 SDSSGLHWNAHVIEAPLDQ 83
G N ++ DQ
Sbjct: 52 VGDLGQGANVATVKRIYDQ 70
>gi|1086561|gb|AAB68968.1| FlgG [Agrobacterium tumefaciens]
gi|2459714|gb|AAB71790.1| FlgG [Agrobacterium tumefaciens]
Length = 262
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
+ IA+ + ++++ NIAN +T Y+ + + F +L Q M
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYK-RARAEFTDLLYQTERMQG 52
>gi|68164540|gb|AAY87269.1| predicted flagellar hook-associated protein 1 [uncultured
bacterium BAC17H8]
Length = 1404
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I N + I +NIAN +T Y+ + + ++ + L+
Sbjct: 3 NLFDIGRSGLNSYRQGLAITGQNIANINTDGYKRRG--------AELEELSAAKASVLES 54
Query: 65 SDSSGLHWNAHVIEAPLDQ 83
S SG+ I D+
Sbjct: 55 SQGSGMGVRIGTIRRAFDE 73
>gi|304321132|ref|YP_003854775.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
HTCC2503]
gi|303300034|gb|ADM09633.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
HTCC2503]
Length = 238
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
P + S+ L Q +++ NIANASTP ++++ I ++ R+ T L
Sbjct: 2 PDNSVALVSRQGGLLKAVQ-MIANNIANASTPGFKSE-----GAIFSEYVSEGRSLATSL 55
Query: 63 KESDSSGLHWNAHVIEAPLDQTTG 86
G + PL QT G
Sbjct: 56 SMGRFVGQSTD--YASGPLKQTGG 77
>gi|302384099|ref|YP_003819922.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
ATCC 15264]
gi|302194727|gb|ADL02299.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
ATCC 15264]
Length = 144
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 11/121 (9%)
Query: 9 IASQHANWLSERQKIVSENIANAS----TPNYRA--KDISSFETILNQNFLMARTHETHL 62
+A+ R +I++ENIANA T + + I FE Q +
Sbjct: 19 VAASALTAQQSRMRIIAENIANAESTARTAGGQPYRRQIPVFEA--RQIDGATGVSLAEV 76
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ S A ++ + V E + YE N +I+ +
Sbjct: 77 RPDQSDFRREYDPSHPAADADGYVLRPN---VDSLIESMDMREAQRAYEANLNVIETART 133
Query: 123 M 123
M
Sbjct: 134 M 134
>gi|264676571|ref|YP_003276477.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
CNB-2]
gi|262207083|gb|ACY31181.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
CNB-2]
Length = 246
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
AN ++RQ +++ N+ANA T +RA ++S+F ++ Q
Sbjct: 12 ANAAAQRQAVLAHNLANAGTNGFRA-EMSTFRSVPLQGSGAGT 53
>gi|313624712|gb|EFR94667.1| flagellar hook protein FlgE [Listeria innocua FSL J1-023]
Length = 411
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
+ + D T G S
Sbjct: 65 SFGSGSKIGAILTDYTAGSPTS 86
>gi|288553067|ref|YP_003425002.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
gi|288544227|gb|ADC48110.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
Length = 151
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 39/143 (27%), Gaps = 23/143 (16%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN----------YRAKDI-------SSFETILN 49
F ++ R ++S N+ANA T YR K + F L
Sbjct: 7 FNASASALTTQRLRMDVISSNMANAETTRARMVDGEWTPYRRKMVVVEPNQKQPFSAFLG 66
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGH 105
T +K S ++ P G V E+
Sbjct: 67 NAMKQNSEAGTGVKASAIVEDQNPFKLLYDPTHPDA--NEDGYVEMPNVDPLREMVDLMT 124
Query: 106 IKYLYELNTKLIKKLNSMVMHVV 128
YE N + +M+M +
Sbjct: 125 ATRSYEANVTSLNATKNMLMKAL 147
>gi|120597307|ref|YP_961881.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
gi|120557400|gb|ABM23327.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
Length = 261
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 38 AKDISSFETILNQNFLMARTHETHL-KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+D+ + N +L +E+ +SG+ + L + G V +
Sbjct: 167 PQDLGQITLVNFTNPAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNV 226
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVM 125
E+ + + YE+N K++ + M+
Sbjct: 227 VEEMVEMISTQRAYEMNAKVVSASDDMLK 255
>gi|312879581|ref|ZP_07739381.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
12260]
gi|310782872|gb|EFQ23270.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
12260]
Length = 139
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 26/137 (18%)
Query: 8 QIASQHANWLSERQKIVSENIANASTP-----NYRAKDISSFETILNQNFLMARTHETHL 62
+A VS N+AN +T + + F+ L + +
Sbjct: 8 DVAGSALTAHRLWMDTVSSNLANVNTTRTPSGGPYVRKVPIFQEKLMEA----------M 57
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS---GN--------TVGITNELYKSGHIKYLYE 111
K + SS A + + PL Q N V + E+ YE
Sbjct: 58 KGAPSSSGVRVAEIAKDPLPPRMVYQPDHPDANAEGYVAYPNVNVVREMADMLVASRAYE 117
Query: 112 LNTKLIKKLNSMVMHVV 128
+ +++ ++ +
Sbjct: 118 ASVNVVETGKALWTSAL 134
>gi|239815249|ref|YP_002944159.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
gi|239801826|gb|ACS18893.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
Length = 262
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ S SG A E + + G+ V +T E+ + +YE N K+++ +
Sbjct: 192 YRSSTGSGEAIAAKASEDGMGSFAQGFLEGSNVKLTEEMVNLMVAQRVYEANVKVMQASD 251
Query: 122 SMV 124
M+
Sbjct: 252 EML 254
>gi|34557980|ref|NP_907795.1| flagellar basal body rod protein FlgC [Wolinella succinogenes DSM
1740]
gi|34483698|emb|CAE10695.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGC PROXIMAL ROD PROTEIN
[Wolinella succinogenes]
Length = 164
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 46/163 (28%), Gaps = 37/163 (22%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQ 50
M ++ F I+ + R ++S NIANA+T YR K++ F+ +LNQ
Sbjct: 1 MAFLSSFDISGYGLSAQRFRVNMISSNIANANTTRTDEGGPYRRKEVIFKAFDFDEVLNQ 60
Query: 51 NFL-----------------MARTHETHLK-------ESDSSGLHWNAHVIEAPLDQTTG 86
+ + DS +
Sbjct: 61 KLGENNNLLKYEDPLDEDEWGLEPKPSIMSVYVDKVVRDDSQPRMKYEPSHPDANSEGYV 120
Query: 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ N V E+ Y+ N + +M +
Sbjct: 121 AYPNINPVV---EMADLIEATRAYQANVSAFQSAKNMASTALT 160
>gi|15615023|ref|NP_243326.1| flagellar basal body rod protein FlgC [Bacillus halodurans C-125]
gi|10175080|dbj|BAB06179.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
Length = 152
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 24/131 (18%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET-------HLKESDSSGLHW 72
R ++S N+ANA T RA+ ++ + + + +E H S
Sbjct: 20 RMDVISANMANAETT--RARQVNGEWEPYRRKMIAVQPNEQTPFSAHLHTAMKRSESKIG 77
Query: 73 NAHVIEAPLDQTTGVQ-------VSGN--------TVGITNELYKSGHIKYLYELNTKLI 117
N + A ++ T + N V E+ YE N +
Sbjct: 78 NGVKVSAIVEDQTPFKLVYQPDHPDANEEGYVEMPNVDPLREMVDLMSATRSYEANVTTL 137
Query: 118 KKLNSMVMHVV 128
+++M +
Sbjct: 138 NASKNILMKAL 148
>gi|293115683|ref|ZP_05792615.2| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
gi|292808788|gb|EFF67993.1| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
Length = 440
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+ ++ NIAN +T ++++ ++ F + Q A ++
Sbjct: 15 HQTKMDVIGNNIANVNTVGFKSQSVT-FSDVFYQTTQNASGANAETGMGGTNAKQIGLGS 73
Query: 77 IEAPLDQTTGVQVSGNT 93
+ + TT V SG +
Sbjct: 74 TVSSI--TTKVSESGGS 88
>gi|260431748|ref|ZP_05785719.1| flagellar basal-body rod protein FlgG [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415576|gb|EEX08835.1| flagellar basal-body rod protein FlgG [Silicibacter
lacuscaerulensis ITI-1157]
Length = 261
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +IA+ + R + +S N+AN +T Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARR-AEFADLHYQQMARAGTVNASDG 59
Query: 64 ESDSSGLHWNAHVIEAPL 81
+G+ V A +
Sbjct: 60 TVLPTGIQLGLGVRPAAV 77
>gi|302874613|ref|YP_003843246.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
gi|307690776|ref|ZP_07633222.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
743B]
gi|302577470|gb|ADL51482.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
Length = 254
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 18 SERQKIVSENIANASTPNYRAKD--ISSFETILNQNFLMARTHETHLKESDSSGLHWNAH 75
R +S N+ANA+T Y++ D + SF+ +L +N + + ++ GL
Sbjct: 16 EARMNSISNNLANANTVGYKSDDLILKSFDQVLLEN--RGKKNGEAHVRNELGGLSLGVE 73
Query: 76 VIEAPLDQTTGVQVS 90
+ E D G S
Sbjct: 74 LDETYTDYNQGTLES 88
>gi|148269402|ref|YP_001243862.1| hypothetical protein Tpet_0257 [Thermotoga petrophila RKU-1]
gi|147734946|gb|ABQ46286.1| protein of unknown function DUF1078 domain protein [Thermotoga
petrophila RKU-1]
Length = 623
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+V NI+N +T ++A + +FET+L Q R+ + ++ ++ + + V
Sbjct: 19 MDVVGNNISNVNTVGFKASRV-NFETMLAQTIKAGRSPQENVGGTNPMQIGLGSQVS 74
>gi|28211323|ref|NP_782267.1| flagellar hook protein flgE [Clostridium tetani E88]
gi|28203763|gb|AAO36204.1| flagellar hook protein flgE [Clostridium tetani E88]
Length = 365
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+ ++ NIAN +T ++ + I F+ +L+QN ++ ++ S + V
Sbjct: 39 QTKLDVIGNNIANVNTTAFKNQRIR-FQDVLSQNLKFGTGASANVGGTNPSQVGLGVEVA 97
>gi|146294548|ref|YP_001184972.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
CN-32]
gi|145566238|gb|ABP77173.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
CN-32]
Length = 261
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 38 AKDISSFETILNQNFLMARTHETHL-KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+D+ + N +L +E+ +SG+ + L + G V +
Sbjct: 167 PQDLGQITLVNFTNPSGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNV 226
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVM 125
E+ + + YE+N K++ + M+
Sbjct: 227 VEEMVEMISTQRAYEMNAKVVSASDDMLK 255
>gi|319787119|ref|YP_004146594.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas
suwonensis 11-1]
gi|317465631|gb|ADV27363.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas
suwonensis 11-1]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM 54
+A + R +V+ N+AN +T ++ +D ++FE +L Q
Sbjct: 7 VAKTGLDAQQTRMSVVANNLANTNTTGFK-RDRANFEDLLYQQVRQ 51
>gi|328958286|ref|YP_004375672.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
gi|328674610|gb|AEB30656.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
Length = 145
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 44/144 (30%), Gaps = 18/144 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKD----ISSFETILNQNFLMAR 56
M QI + + + +S NIAN +T R +D E + ++F
Sbjct: 1 MSIFDSMQINASGLSLERLKLDTISTNIANVNTT--RTEDGEGPYLKKEVVFEESFKQVE 58
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQV---SGN--------TVGITNELYKSGH 105
T + ++ S + E D N V + +E+
Sbjct: 59 TSLAG-QGTEKSFGVKPTEIRENTEDIVMEYNPTHPDANEEGYVQMPNVNMADEMIDMMT 117
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
Y+ N + M+ ++
Sbjct: 118 TLRTYDANVTAMNASKEMLTKALQ 141
>gi|325923276|ref|ZP_08184949.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
19865]
gi|325546203|gb|EGD17384.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
19865]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+A + R ++S N+AN +T ++ +D ++FE +L Q
Sbjct: 7 VAKTGLDAQQTRMSVISNNLANTNTTGFK-RDRAAFEDLLYQQV 49
>gi|118589943|ref|ZP_01547347.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
gi|118437440|gb|EAV44077.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
Length = 243
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
LS R + V+ N+AN +T YRA ++ F ++++
Sbjct: 15 LSNRLETVARNVANMNTAGYRADEVK-FAELVSKAGQ 50
>gi|21242725|ref|NP_642307.1| flagellar basal body rod protein FlgG [Xanthomonas axonopodis pv.
citri str. 306]
gi|78047584|ref|YP_363759.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294624042|ref|ZP_06702805.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665577|ref|ZP_06730858.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|325927973|ref|ZP_08189194.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
91-118]
gi|21108201|gb|AAM36843.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas axonopodis pv. citri str. 306]
gi|78036014|emb|CAJ23705.1| flagella basal body rod protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292601661|gb|EFF45635.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604675|gb|EFF48045.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|325541658|gb|EGD13179.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
91-118]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+A + R ++S N+AN +T ++ +D ++FE +L Q
Sbjct: 7 VAKTGLDAQQTRMSVISNNLANTNTTGFK-RDRAAFEDLLYQQV 49
>gi|251772413|gb|EES52980.1| flagellar basal body rod protein [Leptospirillum
ferrodiazotrophum]
Length = 265
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
+ ++S N+AN +TP +R KD F + L + RT
Sbjct: 16 EQMMDVLSSNLANVNTPGFR-KDRVMFRSYLPHREYLHRTPP 56
>gi|220917700|ref|YP_002493004.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955554|gb|ACL65938.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 235
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+E+ V++N+ANA TP ++A +FE+ L + + ++G+
Sbjct: 15 RAEQLDAVADNLANAQTPGFKAAR-PAFESFL----APGAAQDKRYAAAVATGIDLRPGP 69
Query: 77 IEAPLDQTTGVQVSGN 92
+ + V +G
Sbjct: 70 TQRTGNALDVVPEAGM 85
>gi|299531285|ref|ZP_07044695.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
S44]
gi|298720692|gb|EFI61639.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
S44]
Length = 246
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
AN ++RQ +++ N+ANA T +RA ++S+F ++ +SG
Sbjct: 12 ANAAAQRQAVLAHNLANAGTNGFRA-EMSTFRSV---PLQGTGAGTRVFALEATSGYQDT 67
Query: 74 AHVIE 78
+
Sbjct: 68 PGPAQ 72
>gi|21231395|ref|NP_637312.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768552|ref|YP_243314.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
campestris str. 8004]
gi|188991639|ref|YP_001903649.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
campestris str. B100]
gi|325916945|ref|ZP_08179189.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria
ATCC 35937]
gi|21113060|gb|AAM41236.1| flagellar biosynthesis, cell-distal portion of basal-body rod
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573884|gb|AAY49294.1| flagellar biosynthesis, cell-distal portion of basal-body rod
[Xanthomonas campestris pv. campestris str. 8004]
gi|167733399|emb|CAP51600.1| unnamed protein product [Xanthomonas campestris pv. campestris]
gi|325536848|gb|EGD08600.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria
ATCC 35937]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+A + R ++S N+AN +T ++ +D ++FE +L Q
Sbjct: 7 VAKTGLDAQQTRMSVISNNLANTNTTGFK-RDRAAFEDLLYQQV 49
>gi|312884832|ref|ZP_07744524.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367484|gb|EFP95044.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 30/68 (44%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+++++SGL E + + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRQTEASGLAEELIASEDGVGSIKQRALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|254830312|ref|ZP_05234967.1| flagellar hook protein FlgE [Listeria monocytogenes 10403S]
Length = 411
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
+ + D T G S
Sbjct: 65 SFGSGSKIGAILTDYTAGSPTS 86
>gi|160896078|ref|YP_001561660.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
gi|160361662|gb|ABX33275.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
Length = 246
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
AN ++RQ +++ N+ANA T +RA ++S+F ++ + +SG
Sbjct: 12 ANAAAQRQSVLAHNLANAGTNGFRA-EMSTFRSV---PLQGSGAGTRVFALEATSG---- 63
Query: 74 AHVIEAPLDQTTGVQVSGNTV 94
+V Q TG + +
Sbjct: 64 -YVDTPGPTQRTGRALDAMAM 83
>gi|86157778|ref|YP_464563.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774289|gb|ABC81126.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 235
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+E+ V++N+ANA TP ++A +FE+ L + + +SG+
Sbjct: 15 RAEQLDAVADNLANAQTPGFKAAR-PAFESFL----APGAAQDKRYAAAVASGVDLRPGP 69
Query: 77 IEAPLDQTTGVQVSG 91
+ + V +G
Sbjct: 70 TQRTGNALDVVPEAG 84
>gi|50954410|ref|YP_061698.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950892|gb|AAT88593.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 390
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F + +Q + + NIAN +T ++A + FE L+Q A +
Sbjct: 8 GVFGLQAQQTML-----DVTANNIANVNTAGFKASSVQ-FEDALSQVTRTASAPTDVIGG 61
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQV 89
+ + + D T G
Sbjct: 62 TTPAAVGLGVRAAGIDTDWTQGATQ 86
>gi|16799780|ref|NP_470048.1| flagellar hook protein FlgE [Listeria innocua Clip11262]
gi|16802739|ref|NP_464224.1| flagellar hook protein FlgE [Listeria monocytogenes EGD-e]
gi|47095263|ref|ZP_00232874.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
str. 1/2a F6854]
gi|116872086|ref|YP_848867.1| flagellar hook protein FlgE [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|224498779|ref|ZP_03667128.1| flagellar hook protein FlgE [Listeria monocytogenes Finland 1988]
gi|224501998|ref|ZP_03670305.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-561]
gi|254829354|ref|ZP_05234041.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
gi|254900067|ref|ZP_05259991.1| flagellar hook protein FlgE [Listeria monocytogenes J0161]
gi|254911380|ref|ZP_05261392.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254935707|ref|ZP_05267404.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
gi|255027496|ref|ZP_05299482.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-003]
gi|16410086|emb|CAC98775.1| lmo0697 [Listeria monocytogenes EGD-e]
gi|16413157|emb|CAC95937.1| lin0705 [Listeria innocua Clip11262]
gi|47016334|gb|EAL07256.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
str. 1/2a F6854]
gi|116740964|emb|CAK20084.1| flagellar hook protein FlgE, putative [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|258601767|gb|EEW15092.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
gi|258608290|gb|EEW20898.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
gi|293589317|gb|EFF97651.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|313620066|gb|EFR91579.1| flagellar hook protein FlgE [Listeria innocua FSL S4-378]
Length = 411
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
+ + D T G S
Sbjct: 65 SFGSGSKIGAILTDYTAGSPTS 86
>gi|315281358|ref|ZP_07869998.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
gi|313614997|gb|EFR88501.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
Length = 411
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
+ + D T G S
Sbjct: 65 SFGSGSKIGAILTDYTAGSPTS 86
>gi|294679031|ref|YP_003579646.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
1003]
gi|294477851|gb|ADE87239.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
1003]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ QIA+ + R +++S N+AN ST Y A+ + F ++ Q T +
Sbjct: 1 MRALQIAATGMSAQQMRVEVISNNLANMSTTGYNARR-AEFADLMYQQATRPGTITANDG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQT 84
+G+ V + T
Sbjct: 60 TIVPAGVQIGLGVRSTAVSIT 80
>gi|253702510|ref|YP_003023699.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
gi|251777360|gb|ACT19941.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
Length = 145
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 41/144 (28%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----------SSF 44
M T I++ R ++S N+AN ++ YR KD +SF
Sbjct: 1 MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60
Query: 45 ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
L++ T + E + N V E+
Sbjct: 61 GAALSKAAGARSVQVTQINEDQRPPRLQYEPSHPDADPNGYVAYPNINVV---EEMADMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 118 TASRSYEANITATQASKSMALKTL 141
>gi|163744348|ref|ZP_02151708.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex
HEL-45]
gi|161381166|gb|EDQ05575.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex
HEL-45]
Length = 247
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 19 ERQ-KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+RQ I + NIANAST Y+ + + FE +L N M + ++ S
Sbjct: 16 QRQLDITANNIANASTAGYKGEHVV-FEALLQNNTAMGDDQAAFVSDTGS 64
>gi|300871597|ref|YP_003786470.1| flagellar basal-body rod protein FlgG [Brachyspira pilosicoli
95/1000]
gi|300689298|gb|ADK31969.1| flagellar basal-body rod protein, FlgG [Brachyspira pilosicoli
95/1000]
Length = 264
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---RTHETHLKES 65
A+ N + + ++ N+AN +T Y+ K + FE ++ QN + T +T
Sbjct: 7 TAASGMNGMQFKTDTIANNLANVNTIGYK-KVRADFEDLIYQNLKIQGTPATEDTVTPVG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+GL + + DQ +Q +GN + + E
Sbjct: 66 LQTGLGVKSAATQKMFDQ-GSLQATGNKLDLALE 98
>gi|284801027|ref|YP_003412892.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
gi|284994169|ref|YP_003415937.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
gi|284056589|gb|ADB67530.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
gi|284059636|gb|ADB70575.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
Length = 411
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
+ + D T G S
Sbjct: 65 SFGSGSKIGAILTDYTAGSPTS 86
>gi|224436455|ref|ZP_03657469.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
gi|313142967|ref|ZP_07805160.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
gi|313127998|gb|EFR45615.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
Length = 745
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMART-----HETHLKESDSSGLHWNAHVIE 78
+S NIAN +T YR ++I FE++ + N ++ + + SS
Sbjct: 22 ISNNIANVNTIGYR-RNIPQFESLFSTNMDSLNADSPINNDMNYGATKSSNAISTRSGSY 80
Query: 79 APLDQTTGVQVSG 91
D V G
Sbjct: 81 KASDGEFNVAYEG 93
>gi|21672606|ref|NP_660673.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
gi|25008454|sp|Q8K9K4|FLGG_BUCAP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|21623237|gb|AAM67884.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
Length = 260
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I I+ + ++S N+AN ST ++ + + FE ++ Q A T+ + +
Sbjct: 2 IPSLWISKTGLDAQQINMNVISNNLANVSTNGFK-RSRAVFEDLMYQTMRQAGTNSS-ID 59
Query: 64 ESDSSGLHWNAHVIEAPLD 82
+ SGL V +
Sbjct: 60 TTLPSGLQLGTGVRPVSTE 78
>gi|302343058|ref|YP_003807587.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
gi|301639671|gb|ADK84993.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
Length = 452
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 11/108 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-E 59
MQ +FF S S+ IV++N+AN++T Y++ + F +L + +
Sbjct: 1 MQATSFFNGVS-GLKSFSQGLNIVADNLANSNTYGYKSSR-AEFADVLYRELSYTGSDLT 58
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQV----SGN---TV-GITNE 99
T + + W+ ++ Q TG + GN TV + E
Sbjct: 59 TEIDQVGQGATVWSHQLMNQGAIQETGRTLDLAIDGNGFFTVKNLDTE 106
>gi|289666050|ref|ZP_06487631.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670510|ref|ZP_06491585.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 261
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+A + R ++S N+AN +T ++ +D ++FE +L Q
Sbjct: 7 VAKTGLDAQQTRMSVISNNLANTNTTGFK-RDRAAFEDLLYQQV 49
>gi|94500243|ref|ZP_01306776.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
gi|94427542|gb|EAT12519.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
Length = 261
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 40 DISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
D+ F +N L A L+ + S + G + N V + E
Sbjct: 174 DVVDF---INPTGLQAVGGNLFLETAASGAPEIGVASEDGFGSIEQGFLENSN-VKVVEE 229
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ K ++ YE+N+K++ + M+ ++ +
Sbjct: 230 MVKMITVQRAYEMNSKVVSSADQMLQYLAQ 259
>gi|84624090|ref|YP_451462.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|161898985|ref|YP_201214.2| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|166712060|ref|ZP_02243267.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|188576758|ref|YP_001913687.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188576950|ref|YP_001913879.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|84368030|dbj|BAE69188.1| flagellar biosynthesis cell-distal portion of basal-body rod
[Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188521210|gb|ACD59155.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521402|gb|ACD59347.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 261
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+A + R ++S N+AN +T ++ +D ++FE +L Q
Sbjct: 7 VAKTGLDAQQTRMSVISNNLANTNTTGFK-RDRAAFEDLLYQQV 49
>gi|89069818|ref|ZP_01157153.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
HTCC2516]
gi|89044619|gb|EAR50735.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
HTCC2516]
Length = 261
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + R +++S N+AN +T Y A+ + F + Q + T
Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLANMNTTGYNARR-AEFADLHYQQMMRPGT 53
>gi|145297456|ref|YP_001140297.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142850228|gb|ABO88549.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 261
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + +SG E + + + V + E+ + YE+N K++ +
Sbjct: 192 YRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 QMLKFVTQ 259
>gi|32477362|ref|NP_870356.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
1]
gi|32447913|emb|CAD77433.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
1]
gi|327537337|gb|EGF24070.1| flagellar basal-body rod protein FlgG [Rhodopirellula baltica
WH47]
Length = 268
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHETH 61
+ A+ + + +++ N+AN +T ++ KD ++FE +L T
Sbjct: 2 SVQTLYTAATGMEAMQTKLDVIANNLANINTTGFK-KDRANFEDLLYRTEVYPGVQDSTQ 60
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTG 86
+ + + V DQ G
Sbjct: 61 TPTAVGTQVGLGVRVTSTQTDQRQG 85
>gi|163744349|ref|ZP_02151709.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
HEL-45]
gi|161381167|gb|EDQ05576.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
HEL-45]
Length = 261
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ ++S NIANA+T ++A ++F+ ++ Q+ +
Sbjct: 1 MKALSIAATGMMAQQTNVDVISNNIANANTTGFKASR-AAFQDLIYQSMQREGALTSEAG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ G+ V A T + G V N+L + + + +
Sbjct: 60 STRPVGIDIGMGVQTAG---TVRLNTQGGMVATENQLNVAIDGRGYFSVTL 107
>gi|42780837|ref|NP_978084.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 10987]
gi|222095368|ref|YP_002529428.1| flagellar basal body rod protein flgc [Bacillus cereus Q1]
gi|229195957|ref|ZP_04322710.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
gi|42736757|gb|AAS40692.1| flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10987]
gi|221239426|gb|ACM12136.1| flagellar basal-body rod protein FlgC [Bacillus cereus Q1]
gi|228587516|gb|EEK45581.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
Length = 137
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDS----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N V +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-VDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|325291939|ref|YP_004277803.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
gi|325059792|gb|ADY63483.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
Length = 262
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
+ IA+ + ++++ NIAN +T Y+ + + F +L Q M
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYK-RARAEFTDLLYQTERMQG 52
>gi|13472570|ref|NP_104137.1| flagellar basal body rod protein FlgF [Mesorhizobium loti
MAFF303099]
gi|17366619|sp|Q98HE3|FLGF_RHILO RecName: Full=Flagellar basal-body rod protein flgF
gi|14023316|dbj|BAB49923.1| flagellar basal-body rod protein; FlgF [Mesorhizobium loti
MAFF303099]
Length = 241
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
MQ + +++Q A L R +++N+ANA+T +RA + FE +++ + + +
Sbjct: 1 MQDSLYVALSAQMA--LERRLDTIADNVANANTVGFRATGVK-FEDMVSGTGQKSVSFAS 57
Query: 61 HLKESDSSGLHWNAHVIEAPLD 82
++ SG H + P D
Sbjct: 58 S-GKTYLSGAHGSLSETGNPFD 78
>gi|332296627|ref|YP_004438550.1| flagellar hook-basal body protein [Thermodesulfobium narugense
DSM 14796]
gi|332179730|gb|AEE15419.1| flagellar hook-basal body protein [Thermodesulfobium narugense
DSM 14796]
Length = 559
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS--GLHWNAHVIE 78
++ NIAN +T ++A ++ F +L+Q A + L + GL I
Sbjct: 19 MDVIGNNIANVNTIGFKASTVT-FSQMLSQTLSGASAPQNGLGGINPMQIGLGTQIAAIS 77
Query: 79 APLDQTTGVQVSGNT 93
P ++ NT
Sbjct: 78 TPFTSSSTENTGVNT 92
>gi|229029424|ref|ZP_04185507.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
gi|228731883|gb|EEL82782.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
Length = 137
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDA----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N V +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-VDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|119503645|ref|ZP_01625728.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
HTCC2080]
gi|119460707|gb|EAW41799.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
HTCC2080]
Length = 244
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
+A+Q A + + Q +V+ N+AN+ T ++A + Q+ + T
Sbjct: 3 NIANLAAQSAREIQQAQAVVTHNLANSGTTGFKA------DLYQAQSSYLNAADGTGTAG 56
Query: 65 SDSSGLHWNAHVI-EAPLDQTTGVQVSG 91
S+ S L ++A I + D + G
Sbjct: 57 SNGSALDYSAGAIAQTGRDLDVAITGDG 84
>gi|307945666|ref|ZP_07661002.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
gi|307771539|gb|EFO30764.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
Length = 260
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S N+AN T Y+ + + F+ ++ QN A + +
Sbjct: 1 MKALHIAATGMKAQERNVEVISNNVANLRTTGYKRQRV-DFQDLMYQNLRRAGSETSTAG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+G+ + V A +
Sbjct: 60 TIVPTGVQIGSGVKVAATSR 79
>gi|146343395|ref|YP_001208443.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
sp. ORS278]
gi|146196201|emb|CAL80228.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
sp. ORS278]
Length = 136
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 18/139 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANA-----------STPNYRAKDISSFETILN 49
M PI A N + R ++ + N+ANA + P K E + +
Sbjct: 1 MSPIA--SNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQS 58
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ +S + + V + E+ KY
Sbjct: 59 DVAGGGTQTTIAKAGNGTSASYDPTAPFANKEGLVAAPR-----VDLAQEMISQLVAKYS 113
Query: 110 YELNTKLIKKLNSMVMHVV 128
+ N +++K + M V+
Sbjct: 114 FAANARVLKASDEMSRIVI 132
>gi|74101660|gb|AAZ99750.1| FlgGL [Aeromonas hydrophila]
Length = 275
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ + +SG E + + + V + E+ + YE+N K++ +
Sbjct: 206 YRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAYEMNAKVVSAAD 265
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 266 QMLKFVTQ 273
>gi|15887898|ref|NP_353579.1| flagellar basal body rod protein FlgG [Agrobacterium tumefaciens
str. C58]
gi|20141428|sp|Q44338|FLGG_AGRT5 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|15155490|gb|AAK86364.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
C58]
Length = 262
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
+ IA+ + ++++ NIAN +T Y+ + + F +L Q M
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYK-RARAEFTDLLYQTERMQG 52
>gi|16126303|ref|NP_420867.1| flagellar basal body rod protein FlgG [Caulobacter crescentus
CB15]
gi|221235080|ref|YP_002517516.1| flagellar basal body rod protein FlgG [Caulobacter crescentus
NA1000]
gi|13637955|sp|Q06172|FLGG_CAUCR RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|13423543|gb|AAK24035.1| flagellar basal-body rod protein FlgG [Caulobacter crescentus
CB15]
gi|220964252|gb|ACL95608.1| flagellar basal-body rod protein flgG [Caulobacter crescentus
NA1000]
Length = 262
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ +++S NIAN +T ++ + + F+ +L Q A + +
Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQR-AEFQDLLYQTIERAGSQSSSDG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG 86
+G+ V + + T
Sbjct: 60 NIVPTGVQVGGGVKAGSVYRITE 82
>gi|153831731|ref|ZP_01984398.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
gi|156976139|ref|YP_001447045.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
BAA-1116]
gi|269960114|ref|ZP_06174490.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
gi|148872241|gb|EDL71058.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
gi|156527733|gb|ABU72818.1| hypothetical protein VIBHAR_04910 [Vibrio harveyi ATCC BAA-1116]
gi|269835085|gb|EEZ89168.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
Length = 144
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 10/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISSFETILNQNFLMAR 56
M + I + R V+ N+ANA P+ K + + Q MA
Sbjct: 1 MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMAT 60
Query: 57 THETHLKESDS-SGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLY 110
+ + + NA E + + V + +E+ +
Sbjct: 61 ENGVYPNAEVRIVDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVSEMADMMSATRSF 120
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N +++ + SM ++R
Sbjct: 121 ETNVEVLTNVKSMQQGLLR 139
>gi|313683371|ref|YP_004061109.1| flagellar basal-body rod protein flgc [Sulfuricurvum kujiense DSM
16994]
gi|313156231|gb|ADR34909.1| flagellar basal-body rod protein FlgC [Sulfuricurvum kujiense DSM
16994]
Length = 164
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILNQ 50
M + F I+ + R +S NIANA T YR +++ F + N+
Sbjct: 1 MAFLNSFDISGYGLSAQRVRVNTISANIANAQTTRTNEGGPYRRQEVIFKAIDFNKVYNK 60
Query: 51 NFLMARTHE--THLKESDSSGLHWNAHVIEAPLD-------------QTTGVQVSGN--- 92
+ + + +GL N ++ +D + N
Sbjct: 61 ALENETSALEYSDPLKEGLAGLKPNPAIMSVVVDKISRDDKAPKMKFDPSHPDADANGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ E+ Y+ N + +M +
Sbjct: 121 AYPNINPVVEMADLVEATRSYQANVAAFESAKNMAGSAI 159
>gi|197122908|ref|YP_002134859.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
gi|196172757|gb|ACG73730.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
Length = 235
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+E+ V++N+ANA TP ++A +FE+ L + + ++G+
Sbjct: 15 RAEQLDAVADNLANAQTPGFKAAR-PAFESFL----APGAAQDKRYAAAVATGIDLRPGP 69
Query: 77 IEAPLDQTTGVQVSGN 92
+ + V +G
Sbjct: 70 TQRTGNALDVVPEAGM 85
>gi|209547530|ref|YP_002279448.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209538774|gb|ACI58708.1| protein of unknown function DUF1078 domain protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 430
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A + + R VS+NIANA+T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + D + G
Sbjct: 59 GVQTSVRQAISQQGDISYTTSDYDLAISGDG 89
>gi|58039417|ref|YP_191381.1| flagellar basal body rod protein FlgG [Gluconobacter oxydans
621H]
gi|58001831|gb|AAW60725.1| Flagellar basal-body rod protein FlgG [Gluconobacter oxydans
621H]
Length = 263
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA + +S NIAN ST Y+ + + F+ ++ QN +
Sbjct: 1 MRALDIAGTGMQAQQTNVETISNNIANMSTTGYK-RSRAEFQDLIYQNIRRVGASSSDTG 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGITNE 99
+ +G V A ++ ++ + N++ + +
Sbjct: 60 TTIPAGAQVGLGVKTAAIYRINDQGSLEQTSNSLDLAVQ 98
>gi|262653|gb|AAB24739.1| flagellar basal body distal rod protein [Caulobacter vibrioides]
Length = 262
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ +++S NIAN +T ++ + + F+ +L Q A + +
Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQR-AEFQDLLYQTIERAGSQSSSDG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG 86
+G+ V + + T
Sbjct: 60 NIVPTGVQVGGGVKAGSVYRITE 82
>gi|288960379|ref|YP_003450719.1| flagellar basal-body rod protein [Azospirillum sp. B510]
gi|288912687|dbj|BAI74175.1| flagellar basal-body rod protein [Azospirillum sp. B510]
Length = 134
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 8/131 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANA-STPNYRAKD-ISSFETILNQNFLMARTHETH 61
+ IA + R + N+AN ST AKD + + Q +A+T
Sbjct: 2 VGSIGIALGGLTAQTRRLDASASNVANVRSTSAVPAKDGSTDGKRAAYQPLAVAQTDGNP 61
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLI 117
+ + + AP D SG V + E Y N ++
Sbjct: 62 GTRTTFTPITPAYLQEYAPDDSAANG--SGMVAAPNVDLATERITQMAANRAYGANVAVV 119
Query: 118 KKLNSMVMHVV 128
+ + M+ ++
Sbjct: 120 RTQDEMMKSLL 130
>gi|323203175|gb|EFZ88205.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
Length = 179
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|311068150|ref|YP_003973073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
gi|310868667|gb|ADP32142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
Length = 264
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++ ++ F+ +++Q + ++S +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVGFKKSRVT-FKDMVSQTIAGGSAAGAQVGGTNSKQIG 68
Query: 72 WNAHVIEAPLDQTTGVQVS-GNTVGI 96
+ +T S G T+ +
Sbjct: 69 LGSSTGTIDTIHSTSATQSTGRTLDL 94
>gi|284925346|gb|ADC27698.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 544
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 20 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 72
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 73 QGSPVASDG 81
>gi|315123658|ref|YP_004065662.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315017380|gb|ADT65473.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 544
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 20 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 72
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 73 QGSPVASDG 81
>gi|254496889|ref|ZP_05109737.1| flagellar basal body rod protein FlgG [Legionella drancourtii
LLAP12]
gi|254353908|gb|EET12595.1| flagellar basal body rod protein FlgG [Legionella drancourtii
LLAP12]
Length = 261
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ N+AN +T Y+ KD + FE +L QN A +
Sbjct: 20 ATIANNLANVNTTGYK-KDRAQFEDLLYQNTSQAGAQSS 57
>gi|239628951|ref|ZP_04671982.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
1_7_47_FAA]
gi|239519097|gb|EEQ58963.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
1_7_47FAA]
Length = 144
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 37/140 (26%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + I R I+ +N+AN +T YR K + E LN +
Sbjct: 1 MGYLDSLNITGSALTAERFRTDIIMQNLANQNTTRTADGGPYRRKQVVFRENSLNFKSEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
+ + P+ + V E+
Sbjct: 61 GKAMTKAENGGVYVEEVVESQNPLVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAASR 120
Query: 109 LYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 121 AYEANVTALNIAKSMALKAL 140
>gi|218135322|ref|ZP_03464126.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
43243]
gi|217990707|gb|EEC56718.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
43243]
Length = 276
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL-DQTTGVQVSGNTVGITNELYKSGH 105
+ +T L +D+SG N V + Q + G+ V + E+
Sbjct: 189 QFTNPSGLDKTSGGLLAATDASGDALNESVDQVTKKSQLKQGYLEGSNVNVATEMVNLIT 248
Query: 106 IKYLYELNTKLIKKLNSMVMHV 127
+ YELN+K I + M+
Sbjct: 249 AQRAYELNSKAINASDEMLQQA 270
>gi|189426324|ref|YP_001953501.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
gi|189422583|gb|ACD96981.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
Length = 465
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
M QI + ++VSENIAN +TP Y + I
Sbjct: 1 MGLSAVLQIGTTGMRVYQVATEVVSENIANVNTPGYSRQRI 41
>gi|77918760|ref|YP_356575.1| flagellar basal body rod protein FlgG [Pelobacter carbinolicus
DSM 2380]
gi|77544843|gb|ABA88405.1| flagellar biosynthesis protein [Pelobacter carbinolicus DSM 2380]
Length = 261
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS---GL 70
+++ N+AN ++ ++ K + F+ IL Q +A + + E +S GL
Sbjct: 12 MEAQQVNMDVIAHNLANVNSAGFK-KSRADFQDILYQTVKVAGSDGSSGVEQPTSIQVGL 70
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
I+ T Q +GN + I E
Sbjct: 71 GSRVAAIQKVF-TTGDFQQTGNDLDIAIE 98
>gi|260886641|ref|ZP_05897904.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
gi|330839527|ref|YP_004414107.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
35185]
gi|260863784|gb|EEX78284.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
gi|329747291|gb|AEC00648.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
35185]
Length = 496
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 11/86 (12%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
R ++ NIAN +T +++ ++ F L Q A + ++ + V
Sbjct: 15 HQTRMDVIGNNIANVNTIGFKSSRVT-FADTLYQTQSGAAAPTGTVGGTNPKQIGLGVGV 73
Query: 77 IEA----------PLDQTTGVQVSGN 92
+ T + +SGN
Sbjct: 74 ASVDQLFGDASPQATGKNTDLALSGN 99
>gi|260779345|ref|ZP_05888237.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605509|gb|EEX31804.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
BAA-450]
Length = 261
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+++SG E + + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETEASGQADELIAGEDGVGSIKQGSLEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|219685761|ref|ZP_03540572.1| flagellar basal body rod protein FlgB [Borrelia garinii Far04]
gi|219672700|gb|EED29728.1| flagellar basal body rod protein FlgB [Borrelia garinii Far04]
Length = 99
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 42 SSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
+F + + ++ + HL + + + LD + + +GN V I +E+
Sbjct: 14 KAFSNKGKNDLSLIKSTDKHLSG-LKNPEYSDVKPHRV-LDHFSTMNNNGNNVDIDSEIK 71
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ +Y L T + + V++
Sbjct: 72 ALVQNQMMYSLMTNVQAHYFKSINIVLK 99
>gi|221069321|ref|ZP_03545426.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
KF-1]
gi|220714344|gb|EED69712.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
KF-1]
Length = 246
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
AN ++RQ +++ N+ANA T +RA ++S+F ++ Q
Sbjct: 12 ANAAAQRQAVLAHNLANAGTNGFRA-EMSTFRSVPLQGTGAGT 53
>gi|47566127|ref|ZP_00237165.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
gi|206974761|ref|ZP_03235676.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
gi|217959228|ref|YP_002337776.1| flagellar basal body rod protein FlgC [Bacillus cereus AH187]
gi|229138444|ref|ZP_04267033.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
gi|47557044|gb|EAL15374.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
gi|206746780|gb|EDZ58172.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
gi|217065314|gb|ACJ79564.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH187]
gi|228644981|gb|EEL01224.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
Length = 137
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 21 QKIVSENIANAST---PN---YRAKDIS-SFETILNQNFLMARTHETHLKESDSSGLHWN 73
++ S NI NA+T P Y + + T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLEGTPTNGVKIKSIEADKTENL 78
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N V +T E+ + +YE NT ++ M+
Sbjct: 79 VYDPTHPHANEEGYVRYPN-VDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|207092210|ref|ZP_03239997.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
Length = 605
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 19/70 (27%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S NIAN +T YR+ D F+T+ + +HL ++ + N D+
Sbjct: 22 LSNNIANVNTLGYRSND-PEFKTLFS----------SHLDALNAKSVVAN--------DR 62
Query: 84 TTGVQVSGNT 93
GV SGNT
Sbjct: 63 NYGVTGSGNT 72
>gi|146338873|ref|YP_001203921.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. ORS278]
gi|146191679|emb|CAL75684.1| Dihydroxy-acid dehydratase (DAD) [Bradyrhizobium sp. ORS278]
Length = 557
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 13 HANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHW 72
H + + K + EN++ A PNY A+ I+ FET +A + L
Sbjct: 321 HKDARTVNGKTLWENVSEA--PNYNAEVITPFETPFKTEAGIA---------ILTGNLAP 369
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGIT--NELYKSGH 105
N VI+ + +G V E++ +
Sbjct: 370 NGAVIKPSAASPELMNHTGRAVVFESVEEMHDAVD 404
>gi|126734107|ref|ZP_01749854.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
gi|126716973|gb|EBA13837.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
Length = 261
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ +IA+ R +++S N+AN +T Y + + F + Q + T
Sbjct: 1 MRALKIAAAGMTAQQMRVEVISNNLANMNTTGYNPRR-AEFADLHYQQLVRPGT 53
>gi|315057484|gb|ADT71813.1| Flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
S3]
gi|315926889|gb|EFV06255.1| flagella basal body rod family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315926904|gb|EFV06270.1| flagella basal body rod family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
Length = 544
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 20 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 72
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 73 QGSPVASDG 81
>gi|226313072|ref|YP_002772966.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
100599]
gi|226096020|dbj|BAH44462.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
100599]
Length = 152
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 42/149 (28%), Gaps = 24/149 (16%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN----------YRAKDIS-------S 43
++ FQ + A+ L+ R +S NIANA YR K + +
Sbjct: 1 MSLFQGINTSASALTANRLRLDTISSNIANAEVTRANFVDGAWQPYRRKMVELSPQTNGT 60
Query: 44 FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNE 99
F+ L + ++ N G V E
Sbjct: 61 FDNFLQAAVGTVSGSQGGQGVKVTAIQEDNTPFKRVYDPSHPDADQDGYLLMPNVDPMKE 120
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ YE N + +M++ +
Sbjct: 121 MVDMISASRSYEANVTALNASKAMMLKAL 149
>gi|220904530|ref|YP_002479842.1| hypothetical protein Ddes_1261 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868829|gb|ACL49164.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 808
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
++ +V NIAN ST ++++ + F L + T + +S
Sbjct: 17 HGQKMNVVGNNIANVSTLGFKSQRM-DFNDYLYRGI--GTTSGPSQIGAGASVYAILGDF 73
Query: 77 IEAPLDQTTGVQ---VSGN 92
+ L+ T V + GN
Sbjct: 74 SQGSLESTNSVTDLAIDGN 92
>gi|294675565|ref|YP_003576180.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
1003]
gi|294474385|gb|ADE83773.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
1003]
Length = 484
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
M + F A S + ++VS NIANA T Y +++S L R
Sbjct: 1 MSIASAFNFAISGLTASSRKAEVVSSNIANAMTEGYARRELSIASQTLGGTGGGVR 56
>gi|218506433|ref|ZP_03504311.1| flagellar basal body rod protein FlgC [Rhizobium etli Brasil 5]
Length = 102
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 1 MQPITF-FQIASQHANWLSERQKIVSENIANA----STPN---YRAKDISSFETILNQNF 52
M P++ +IA S R +IVSENIANA TP YR K I+ F ++
Sbjct: 1 MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTIT-FGQQMDHVS 59
Query: 53 LMARTH 58
+ +
Sbjct: 60 GVETVN 65
>gi|241203124|ref|YP_002974220.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857014|gb|ACS54681.1| protein of unknown function DUF1078 domain protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 432
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R V++NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSSTDLAISGDG 89
>gi|86154050|ref|ZP_01072251.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85842464|gb|EAQ59678.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 545
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 74 QGSPVASDG 82
>gi|323341368|ref|ZP_08081612.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
gi|323091245|gb|EFZ33873.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
Length = 234
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
I + L +RQ+ +S NIAN +T Y+ K + F++ L
Sbjct: 2 IRSIDTLKSNFEVLQKRQEAISANIANVNTNGYQEKKL--FQSTLKNV 47
>gi|209521589|ref|ZP_03270287.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
gi|209497972|gb|EDZ98129.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
Length = 502
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A + + + S + +
Sbjct: 19 VIGNNIANANTVGFKSGT-AEFADMYANSVATATSQQIGIGTQLSEVQQQFSQGTITTTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALNVAINGN 87
>gi|95929873|ref|ZP_01312614.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
684]
gi|95134169|gb|EAT15827.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
684]
Length = 242
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+V+ N++NA+T Y+ KD F +L+ + + + + ++ V+ +
Sbjct: 21 VVTNNLSNANTLGYK-KDRVQFSAVLDSAKQNQQAGGVNYSYVEVAKTDYSQGVLIDTRN 79
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 80 E-YDVAINGN 88
>gi|167770222|ref|ZP_02442275.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
17241]
gi|167667544|gb|EDS11674.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
17241]
Length = 145
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 38/134 (28%), Gaps = 15/134 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS------SFETIL 48
M + I R + +NIAN++T YR K + F++ L
Sbjct: 1 MSFMKSMDIVGSALTAERFRMDTILQNIANSNTTRTPEGEPYRRKQVVFQERAIDFQSAL 60
Query: 49 NQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKY 108
+ E S + + D V V +T E
Sbjct: 61 ADASNRIERGGVRVTEVVESQRDFTPVYDPSHPDANEDGYVMYPNVNLTEERVDLMAASN 120
Query: 109 LYELN---TKLIKK 119
Y+ N ++K
Sbjct: 121 AYDANLTALAVVKS 134
>gi|71906391|ref|YP_283978.1| flagellar hook protein FlgE [Dechloromonas aromatica RCB]
gi|71846012|gb|AAZ45508.1| Flagellar basal body rod protein:Protein of unknown function
DUF1078:Flagellar basal body FlaE [Dechloromonas
aromatica RCB]
Length = 442
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ + S NIANAST +++ + F + + + + S
Sbjct: 3 FQQGLSGLNTSSKALDVTSNNIANASTVGFKSAS-THFADVYAASLAGGGASQVGIGVSA 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S+ + + ++GN
Sbjct: 62 SAIAQQFTQGNITTTSNSLDIALNGN 87
>gi|160939658|ref|ZP_02087006.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
BAA-613]
gi|158437449|gb|EDP15213.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
BAA-613]
Length = 550
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ ++ NIAN +T +++ + F+ + Q A + + +++S + +
Sbjct: 1 MQAHQTKLDVIGNNIANVNTYGFKSSR-ARFQDVYYQTLQSATGGDNNKGGTNASQVGYG 59
Query: 74 AH 75
A
Sbjct: 60 AQ 61
>gi|121612241|ref|YP_999769.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|157414368|ref|YP_001481624.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81116]
gi|167004743|ref|ZP_02270501.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
81-176]
gi|87249055|gb|EAQ72017.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|157385332|gb|ABV51647.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
81116]
gi|307747010|gb|ADN90280.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1]
gi|315931630|gb|EFV10595.1| flagella basal body rod family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 545
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 74 QGSPVASDG 82
>gi|330818585|ref|YP_004362290.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
gi|327370978|gb|AEA62334.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
Length = 414
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++A + F + + A + + ++
Sbjct: 19 VIGNNIANANTTGFKAAT-AQFTDMYANSVSSAVANGIGIGTQLAAVAQVFQQGGFTTTQ 77
Query: 83 QTTGVQVSGN 92
+ ++GN
Sbjct: 78 NPLNMAINGN 87
>gi|126653433|ref|ZP_01725529.1| flagellar basal-body rod protein [Bacillus sp. B14905]
gi|126589789|gb|EAZ83922.1| flagellar basal-body rod protein [Bacillus sp. B14905]
Length = 67
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 18 SERQKIVSENIANASTPNYRA--KDISSFETIL 48
R +++S N+ANA+TP ++A I SF +L
Sbjct: 16 QRRTELLSNNLANANTPGFKADQSTIRSFPDML 48
>gi|86149558|ref|ZP_01067788.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839826|gb|EAQ57085.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 545
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 74 QGSPVASDG 82
>gi|261856358|ref|YP_003263641.1| flagellar basal-body rod protein FlgG [Halothiobacillus
neapolitanus c2]
gi|261836827|gb|ACX96594.1| flagellar basal-body rod protein FlgG [Halothiobacillus
neapolitanus c2]
Length = 262
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN---FLMARTHETHLKES 65
IA + R ++S N+AN +T ++ +D + FE ++ QN A T + +
Sbjct: 8 IAKTGLDAQQTRMSVISNNLANVNTTGFK-QDRAVFEDLIYQNYRQVGAANTQQNEVPTG 66
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ G E Q V + N + +
Sbjct: 67 LNIGTGVKVVATEKNHTQGNLVTTN-NALDL 96
>gi|229918625|ref|YP_002887271.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
gi|229470054|gb|ACQ71826.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
Length = 142
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 17/140 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M F I++ R VS NIANA T R K + + + +
Sbjct: 1 MGMFDSFHISASALTSQRLRMDTVSANIANAQTT--RGKLVDGEWQPYTRKMTVLQEAPF 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-------------TVGITNELYKSGHIK 107
+ +G + +IE D + + N V + E+
Sbjct: 59 RKRLDAVNGGVQVSQIIED--DAPYKLVYNPNHPDADERGYVQMPNVDLLKEMVDLMGAT 116
Query: 108 YLYELNTKLIKKLNSMVMHV 127
YE N + +M++
Sbjct: 117 RSYEANIAAMNASKAMLVKA 136
>gi|196044999|ref|ZP_03112232.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
gi|225863603|ref|YP_002748981.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
gi|229183936|ref|ZP_04311152.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
gi|196024001|gb|EDX62675.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
gi|225788684|gb|ACO28901.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
gi|228599588|gb|EEK57192.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
gi|324325762|gb|ADY21022.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 137
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGANLYERRSVVLESNNSFANMLDS----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N V +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-VDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|221069322|ref|ZP_03545427.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
KF-1]
gi|220714345|gb|EED69713.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
KF-1]
Length = 422
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ ++ NIAN+ST ++A + F ++ A + + +
Sbjct: 3 FQQGLSGLNAASKNLDVIGHNIANSSTTGFKASR-ADFAEMIASAIGSASGQSSGIGVNV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ + ++GN
Sbjct: 62 AAVSQQFRQGSITSTGNNLDLAINGN 87
>gi|134297198|ref|YP_001120933.1| flagellar hook protein FlgE [Burkholderia vietnamiensis G4]
gi|134140355|gb|ABO56098.1| flagellar basal body FlaE domain protein [Burkholderia
vietnamiensis G4]
Length = 413
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTTLGSVQKQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|322806967|emb|CBZ04537.1| flagellar basal-body rod protein FlgG [Clostridium botulinum H04402
065]
Length = 263
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S N+AN +T Y+ +D+ SF+ ++ + + T + +G A Q
Sbjct: 22 ISNNLANVNTVGYKREDV-SFQELVQETLKRKG-YPTSDRPEIQTGTGVKATNWIRDTHQ 79
Query: 84 TTGVQVSGNTVGI--TNE---LYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN + + Y YE + + N M+
Sbjct: 80 QGILLNTGNKTDLAIDGQGFFRVIMADGNYAYERSGNFVVDRNGML 125
>gi|258592496|emb|CBE68805.1| putative Flagellar hook protein flgE [NC10 bacterium 'Dutch
sediment']
Length = 412
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
++ F A ++ NIANA+T Y+A + F +L Q A
Sbjct: 1 MSTFSTAITGLKAYQTDLGVIGNNIANANTTGYKASR-AQFSELLVQTIEGAT 52
>gi|291280096|ref|YP_003496931.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
gi|290754798|dbj|BAI81175.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
Length = 817
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 11/89 (12%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE------SDS 67
N + ++ NIAN +T Y+ I F+ +L Q + +L
Sbjct: 12 LNEHQKSMDVIGNNIANVNTVGYKTSRIV-FQDLLFQTISGGKAPAGNLGGINPKQIGTG 70
Query: 68 SGLHWNAHVIEAPLDQTTGVQVS----GN 92
+ + Q TGV GN
Sbjct: 71 TSTASVDTIFTQGTLQNTGVTTDMAIQGN 99
>gi|148926857|ref|ZP_01810535.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844434|gb|EDK21542.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 545
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 74 QGSPVASDG 82
>gi|153951079|ref|YP_001398445.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938525|gb|ABS43266.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
doylei 269.97]
Length = 164
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 31/159 (19%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI----SSFETILN- 49
M ++ F I+ + R ++S NIAN +T YR +++ + F+ +LN
Sbjct: 1 MAYLSDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLNE 60
Query: 50 -----------QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQV-SGN----- 92
+N L + K + S + + N
Sbjct: 61 QINKNNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV 120
Query: 93 ---TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y+ N ++ +
Sbjct: 121 AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159
>gi|239907786|ref|YP_002954527.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
gi|239797652|dbj|BAH76641.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
Length = 710
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SD++ + A A + Q+S + V + EL ++ Y+ KL+ NSM
Sbjct: 642 GSDTAAASYQATYQAALAAELNEQQLSTSGVNLDEELTNMIKFQHSYQAAAKLVSTANSM 701
Query: 124 VMHVV 128
V+
Sbjct: 702 FETVL 706
>gi|57237057|ref|YP_178069.1| flagellar hook protein [Campylobacter jejuni RM1221]
gi|88597731|ref|ZP_01100964.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|205356434|ref|ZP_03223198.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|218561735|ref|YP_002343514.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|57165861|gb|AAW34640.1| flagellar hook protein [Campylobacter jejuni RM1221]
gi|88190035|gb|EAQ94011.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359441|emb|CAL34223.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|205345621|gb|EDZ32260.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315929148|gb|EFV08373.1| flagella basal body rod family protein [Campylobacter jejuni
subsp. jejuni 305]
Length = 545
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 74 QGSPVASDG 82
>gi|302390139|ref|YP_003825960.1| flagellar hook-associated protein FlgK [Thermosediminibacter
oceani DSM 16646]
gi|302200767|gb|ADL08337.1| flagellar hook-associated protein FlgK [Thermosediminibacter
oceani DSM 16646]
Length = 465
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 5 TFFQI-ASQHANWLSER-QKIVSENIANASTPNY 36
+FF I ++ A + +R Q+ VS N+ANA+TP Y
Sbjct: 4 SFFGIEIAKRALFAQQRAQENVSHNVANANTPGY 37
>gi|323527713|ref|YP_004229866.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
gi|323384715|gb|ADX56806.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
Length = 502
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A ++ + S + +
Sbjct: 19 VIGNNIANANTVGFKS-GAAQFADMYANSVATAVGNQVGIGTKLSEVQQQFSQGTITSTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALDVAINGN 87
>gi|242309753|ref|ZP_04808908.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
98-5489]
gi|239523754|gb|EEQ63620.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
98-5489]
Length = 277
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 20 RQKIVSENIANASTPNYRAKDIS--SFETILNQNFLMARTHETHLKESDSSGLHWNAH-- 75
R +++ NIANA+T ++ D+ F + Q+ + + N
Sbjct: 18 RLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIEDQTKDAAKFYNRSLNRVPQ 77
Query: 76 -VIEAPLDQTTGVQVSGNT 93
V E GV + NT
Sbjct: 78 IVEEFTDRSAGGVVQTENT 96
>gi|114765245|ref|ZP_01444377.1| hypothetical protein 1100011001307_R2601_00410 [Pelagibaca
bermudensis HTCC2601]
gi|114542380|gb|EAU45408.1| hypothetical protein R2601_00410 [Roseovarius sp. HTCC2601]
Length = 249
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+A L + + + NIANA++ ++A+ + FET L ++ T+ S
Sbjct: 7 VAISKLTALERQLDVTANNIANANSSGFKAERVL-FETYLQKDDASLAGEGTNYVLDRGS 65
Query: 69 GLHWNAHVI 77
+ V+
Sbjct: 66 YVDDTPGVV 74
>gi|224417700|ref|ZP_03655706.1| flagellar basal-body rod protein FlgG [Helicobacter canadensis
MIT 98-5491]
gi|253827049|ref|ZP_04869934.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
98-5491]
gi|313141243|ref|ZP_07803436.1| flagellar basal-body rod protein flgg [Helicobacter canadensis
MIT 98-5491]
gi|253510455|gb|EES89114.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
98-5491]
gi|313130274|gb|EFR47891.1| flagellar basal-body rod protein flgg [Helicobacter canadensis
MIT 98-5491]
Length = 277
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 20 RQKIVSENIANASTPNYRAKDI 41
R +++ NIANA+T ++ D+
Sbjct: 18 RLDVIANNIANANTTGFKRDDV 39
>gi|332982896|ref|YP_004464337.1| flagellar hook-associated protein FlgK [Mahella australiensis
50-1 BON]
gi|332700574|gb|AEE97515.1| flagellar hook-associated protein FlgK [Mahella australiensis
50-1 BON]
Length = 495
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
QI N + + + NIANA TP Y + + S + M
Sbjct: 8 LQIGKSAINLQQQALNVTAHNIANAGTPGYTRQQVISEAIVPPSTLGMG 56
>gi|23015788|ref|ZP_00055555.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
magnetotacticum MS-1]
Length = 261
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S NIAN +T + + F +L QN + +
Sbjct: 1 MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRR-PEFADLLYQNLRRVGSQSSDTG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG---VQVSGNTVGITNE 99
+G+ V + + T VQ + NT+ + +
Sbjct: 60 TIVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDMAVQ 98
>gi|224825778|ref|ZP_03698882.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
gi|224602002|gb|EEG08181.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
Length = 241
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL-HWNAHVIEA 79
Q++ + N+ANA T +RA E +Q H+ ++ + + H V+E
Sbjct: 19 QQVHANNLANAQTNGFRA----DIEVASSQAVRGYGYDARHMTRAEPNAVDHRAGTVVET 74
Query: 80 PLDQTTGVQVSG 91
D +Q G
Sbjct: 75 GRDLDVALQGDG 86
>gi|254473478|ref|ZP_05086875.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
gi|211957594|gb|EEA92797.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
Length = 397
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ + +D+SG + V G+ V + EL + +
Sbjct: 314 FSNPDGLQAKSGNVYAATDASGDPAVGFPGDNGFGSLYSGAVEGSNVDLAAELTEMVQAQ 373
Query: 108 YLYELNTKLIKKLNSMVM 125
Y NTK+ + ++
Sbjct: 374 RTYSANTKVFNASSELLQ 391
>gi|162147478|ref|YP_001601939.1| flagellar basal body rod protein FlgG [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545587|ref|YP_002277816.1| flagellar basal body rod protein FlgG [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786055|emb|CAP55637.1| putative flagellar basal-body rod protein flgG [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533264|gb|ACI53201.1| flagellar basal-body rod protein FlgG [Gluconacetobacter
diazotrophicus PAl 5]
Length = 262
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + +S NIAN +T Y+ + + F+ ++ Q+ T +
Sbjct: 2 MPSLDIAATGMQAQTTNVDTISNNIANMTTTGYKRRR-AEFQDLIYQDVRRVGTMSSDTG 60
Query: 64 ESDSSGLHWNAHVIEA 79
+ +G V A
Sbjct: 61 DLVPAGAQIGLGVRTA 76
>gi|161526186|ref|YP_001581198.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
gi|189349098|ref|YP_001944726.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
gi|160343615|gb|ABX16701.1| flagellar basal body FlaE domain protein [Burkholderia
multivorans ATCC 17616]
gi|189333120|dbj|BAG42190.1| flagellar hook protein [Burkholderia multivorans ATCC 17616]
Length = 414
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTALASVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|86151187|ref|ZP_01069402.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841534|gb|EAQ58781.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
260.94]
Length = 545
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYTTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + V G
Sbjct: 74 QGSPVASDG 82
>gi|260222469|emb|CBA32064.1| Flagellar basal-body rod protein flgF [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 246
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A AN + RQ +++ N+AN ST +RA+ L T + +++
Sbjct: 7 TAMTGANAAASRQSVLANNLANVSTNGFRAQ-----LATYRAVPLRGEGATTRVFALEAT 61
Query: 69 GLHWNAHVIEAPLDQTTGVQVSG 91
H N D++ V G
Sbjct: 62 AGHLNTPGPAMRTDRSLDVMAKG 84
>gi|323341388|ref|ZP_08081632.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
25644]
gi|323091265|gb|EFZ33893.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
25644]
Length = 139
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 14/138 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M QI + + + + S NIAN +T Y+ K + E +
Sbjct: 1 MSIFNGLQINASGLSLERMKLDVASTNIANVNTTRTAEGGPYKKKTVEFSENLRQAQGTN 60
Query: 55 ARTHE----THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
T T++ E +++ L ++ +A + + V + +E+ Y
Sbjct: 61 KITSAGVKVTNIAEDNTTKLTYDPTNPDADANGYVEMP----NVNMADEMVDMIQAMRTY 116
Query: 111 ELNTKLIKKLNSMVMHVV 128
E N + +++ +
Sbjct: 117 EANVSSTEANKNILKKAL 134
>gi|39995516|ref|NP_951467.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
PCA]
gi|39982279|gb|AAR33740.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
PCA]
gi|298504516|gb|ADI83239.1| flagellar basal body rod protein FlgC [Geobacter sulfurreducens
KN400]
Length = 146
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 13/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNF-- 52
M + Q++S + R ++S N+ANA++ Y+ KD T + + F
Sbjct: 1 MDFFSAMQVSSSALSAERTRMNLISANLANANSTRTAEGGPYKRKDAVFAATQVGEGFRS 60
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGITNELYKSGHIK 107
+ R + + +G+ + + D + + V + E+
Sbjct: 61 ALDRMRKNAPQGVQVTGIVEDPNPPRLQYDPSHPDADAKGYVALPNVNVVEEMADMIAAT 120
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
YE N ++ +M + +
Sbjct: 121 RAYEANVTAMQAAKNMALKTL 141
>gi|157364671|ref|YP_001471438.1| hypothetical protein Tlet_1820 [Thermotoga lettingae TMO]
gi|157315275|gb|ABV34374.1| protein of unknown function DUF1078 domain protein [Thermotoga
lettingae TMO]
Length = 631
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+V NIAN +T ++ ++ F+T L Q AR+ + ++ ++ + + +
Sbjct: 21 VVGNNIANVNTVGFKGSRVT-FQTALLQTMKAARSPQNNIGGTNPIQIGLGSQLATIDKI 79
Query: 83 QTTGVQVS-GNTVGITNE 99
T G + GN + +
Sbjct: 80 MTQGSFENTGNKTDLAIQ 97
>gi|209963558|ref|YP_002296473.1| flagellar hook-associated protein 1 FlgK, putative
[Rhodospirillum centenum SW]
gi|209957024|gb|ACI97660.1| flagellar hook-associated protein 1 FlgK, putative
[Rhodospirillum centenum SW]
Length = 495
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
Q A ++ I+S N+ANA+TP Y K+++
Sbjct: 7 LQTALTGLQAQQQKSAILSRNVANATTPGYTRKEVT 42
>gi|89902478|ref|YP_524949.1| flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
gi|89347215|gb|ABD71418.1| Flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
Length = 246
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
A AN + RQ ++S N+AN ST +RA ++S+F +
Sbjct: 7 TAMSGANAAAHRQAVLSNNLANVSTNGFRA-ELSTFRAV 44
>gi|82702454|ref|YP_412020.1| flagellar basal body rod protein FlgF [Nitrosospira multiformis
ATCC 25196]
gi|82410519|gb|ABB74628.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 250
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA-----KDISSFETILN 49
+A A + VS N+ANA+TP YRA + + F L
Sbjct: 7 VAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAVPVFSDTLA 52
>gi|302387427|ref|YP_003823249.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
saccharolyticum WM1]
gi|302198055|gb|ADL05626.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
saccharolyticum WM1]
Length = 244
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 22 KIVSENIANASTPNYRAK-DISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
+IV +AN P AK +++ F ++ +Q + + +H + + E
Sbjct: 97 EIVVHYVAN---PGTTAKQNMNYFNSLQDQTGVKKISASSHFIIGLEGEILQGIPIYEMA 153
Query: 81 LDQTTGVQVSGNTVGIT----NELYKSGHIKYL 109
+T + +GNTV I +E K Y
Sbjct: 154 Y--STSKEKNGNTVSIECCHPDETGKFNEATYD 184
>gi|262273531|ref|ZP_06051345.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
101886]
gi|262222509|gb|EEY73820.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
101886]
Length = 126
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 7/118 (5%)
Query: 18 SERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ R V+ N+ANA YRAK FET++ + +KE S
Sbjct: 5 TVRLNAVASNLANADVVSGSEQTGYRAKR-PVFETVMVDKGNGTQGAMVRVKEVLESDAP 63
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V + V E+ +E N ++ + SM ++R
Sbjct: 64 LQRRYEPNHPLANKEGYVFYSQVNPVEEMADMMSASRNFETNVDVMTRARSMQQSILR 121
>gi|254292905|ref|YP_003058928.1| flagellar basal body rod protein FlgG [Hirschia baltica ATCC
49814]
gi|254041436|gb|ACT58231.1| flagellar basal-body rod protein FlgG [Hirschia baltica ATCC
49814]
Length = 261
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ A+ +++S NIAN +T Y+ + + F+ +L N +
Sbjct: 1 MRALSTAATGMQAQQLNVEVISNNIANMNTTGYKRQR-AEFQDLLYTNMEKMGVSSSDAN 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG---VQVSGNTVGI 96
+G+ V + + T VQ + N+ +
Sbjct: 60 TIVPTGVQIGTGVKAGSVYRITEQGPVQQTSNSYDV 95
>gi|169831888|ref|YP_001717870.1| flagellar basal body rod protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638732|gb|ACA60238.1| flagellar basal body rod protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 246
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 9/93 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ R V+ NIAN +T +R + + F L H K
Sbjct: 7 TAASGMLAGQTRLDAVAHNIANVNTTGFR-RQVPVFAPYLQTAV------GRHEKRVTPI 59
Query: 69 GLHWNAHVIEAPLDQTTG--VQVSGNTVGITNE 99
G V A + TG V +G T+ + E
Sbjct: 60 GTTSLGTVPTALVTDLTGGPVVQTGRTMDLALE 92
>gi|317133466|ref|YP_004092780.1| flagellar hook-basal body protein [Ethanoligenens harbinense
YUAN-3]
gi|315471445|gb|ADU28049.1| flagellar hook-basal body protein [Ethanoligenens harbinense
YUAN-3]
Length = 234
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I F + +++ +IAN +T Y +D + F +L + + + ++
Sbjct: 2 IQAFFGGAASLRSRQTAMDVIANDIANVNTAGYVQRD-TDFSDLLYDSMVRPE-NPSYAN 59
Query: 64 ESDSSGLHWNAHVIEAP 80
E + SG +A V +A
Sbjct: 60 ELEGSGAGVDAVVADAS 76
>gi|171321214|ref|ZP_02910184.1| protein of unknown function DUF1078 domain protein [Burkholderia
ambifaria MEX-5]
gi|171093524|gb|EDT38694.1| protein of unknown function DUF1078 domain protein [Burkholderia
ambifaria MEX-5]
Length = 234
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
++ + + ++R + + N++N +TP YR ++I+ F+ +L + A +
Sbjct: 3 DLMTLSLRLISLETQRAETAARNLSNVATPGYR-REIA-FQDMLANDVTPAGGGPPIHRL 60
Query: 65 SDSSGL 70
+D S
Sbjct: 61 TDFSPG 66
>gi|227820852|ref|YP_002824822.1| flagellar basal body rod protein FlgF [Sinorhizobium fredii
NGR234]
gi|227339851|gb|ACP24069.1| Flagellar basal-body rod protein FlgF [Sinorhizobium fredii
NGR234]
Length = 241
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
++SQ A L +R +++NIANA+T +R+ ++ F+ +L
Sbjct: 9 LSSQMA--LEKRLNTLADNIANANTVGFRSTEVK-FDQVL 45
>gi|171321838|ref|ZP_02910739.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
MEX-5]
gi|171092876|gb|EDT38128.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
MEX-5]
Length = 413
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTALASVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|256830790|ref|YP_003159518.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
DSM 4028]
gi|256579966|gb|ACU91102.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
DSM 4028]
Length = 145
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 41/146 (28%), Gaps = 23/146 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M +T + + ++S N+ANA T YR K++ S F
Sbjct: 1 MDFMTAIDVGASALKAERTHLNVISMNLANAKTTRTVDGGPYRRKEVVFKETEVQSPFSK 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEA----PLDQTTGVQVSGNTVGITNELYK 102
+N ES + V E ++ N V E+
Sbjct: 61 AMNSALDQDVKGVR--VESVQNDRRPLKQVYEPGHPDADEEGYVSYPDINVV---EEMTN 115
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N I SM +
Sbjct: 116 MLSAMRAYEANVSTITTSKSMFSKAL 141
>gi|221215571|ref|ZP_03588534.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
gi|221164559|gb|EED97042.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
Length = 413
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTALASVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|319944134|ref|ZP_08018412.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
51599]
gi|319742628|gb|EFV95037.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
51599]
Length = 245
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + + + A L ERQ +S N+ANAST +RA D+ + + + A T
Sbjct: 1 MDRMIYLSMTGAKA--LMERQDALSHNLANASTDGFRA-DLMTARAVPIREEGTATTRVF 57
Query: 61 HLKESDS-SGLHWNAHVIEAPLD 82
+++ S G PLD
Sbjct: 58 NVETSTGFDGKSGPIRQTGNPLD 80
>gi|296103610|ref|YP_003613756.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058069|gb|ADF62807.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 245
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 16/98 (16%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI------LNQNFLMARTHETH- 61
A AN RQ + S N+AN+ST +RA+ +++F ++ L L+A + H
Sbjct: 7 TAMSAANAALNRQAVTSNNLANSSTAGFRAQ-LAAFRSVPIEGETLRTRALVAESTPFHD 65
Query: 62 --LKESDSSGLHWNAHVIEAPL------DQTTGVQVSG 91
+ +G + + + D + G +G
Sbjct: 66 TTMGPITHTGRSLDVALPQDGWLAVALDDGSEGYTRNG 103
>gi|206889963|ref|YP_002249841.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741901|gb|ACI20958.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 554
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M F I + ++VS NI+NA+T Y +D+ F+ + + ++
Sbjct: 1 MSLTALFDIGKTGVLTYQKALEVVSHNISNAATEGYTRQDVI-FQNMSSGILSLSGVTGR 59
Query: 61 HLKESD 66
+K D
Sbjct: 60 GVKLED 65
>gi|91791420|ref|YP_561071.1| putative flagellar basal body rod protein FlgC [Shewanella
denitrificans OS217]
gi|91713422|gb|ABE53348.1| putative flagellar basal body rod protein FlgC [Shewanella
denitrificans OS217]
Length = 127
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 5/123 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + +A + R + S NIA A+ + A + + +
Sbjct: 1 MAELDVRAVAQTGMAFERNRIEAASLNIARANVVSSTAAQVEPLFMAALSGEELQPGNVK 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
S ++ AH + Q + + +E+ K YE N K+
Sbjct: 61 LTGYMKSKAIYQPAHPL--ADKQGFIYMPD---IDLAHEMVTLSSAKRAYEANIKVYNSY 115
Query: 121 NSM 123
M
Sbjct: 116 KEM 118
>gi|319409169|emb|CBI82813.1| Flagellar hook protein FlgE [Bartonella schoenbuchensis R1]
Length = 403
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 4/92 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + N R V+EN+AN +T Y+ D+ ++
Sbjct: 1 MSIYGMMRTGVSGMNAQGTRLSGVAENVANVNTIGYKRTDVQFSNYVIPSGDYAYVPGGA 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
G + + V + GN
Sbjct: 61 R----SYVGHDISISGPARATGRMGDVMIDGN 88
>gi|260767925|ref|ZP_05876859.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
gi|260615955|gb|EEX41140.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
gi|315179628|gb|ADT86542.1| flagellar basal-body rod protein FlgG [Vibrio furnissii NCTC 11218]
Length = 261
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+++SG E + + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETEASGAADELIAGEDGVGSIKQGVLEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|168180911|ref|ZP_02615575.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
2916]
gi|182668190|gb|EDT80169.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
2916]
Length = 144
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
I F A+ LS R ++ NIANA+T Y+ K E + N+
Sbjct: 2 IKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVFEENLNNELNKK 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIE-----APLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
E L ++G+ + + + D VS V + NE+
Sbjct: 62 NGATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRT 121
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE N ++ SM +
Sbjct: 122 YEANVTVMNAEKSMFGKAL 140
>gi|114566383|ref|YP_753537.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337318|gb|ABI68166.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 155
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 46/151 (30%), Gaps = 23/151 (15%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN--------------YRAKDISS--- 43
M + ++ R ++ N+AN T + A++ S+
Sbjct: 1 MGFLNSIDTSASGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEARNASAPKK 60
Query: 44 -FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-----TVGIT 97
F+ L + + ++ ++ N D + + V I
Sbjct: 61 RFQRFLEEQSQTFNAANSGVRVKQIREINENEAPYRRVYDPSHPEADNEGYVNYPNVNIV 120
Query: 98 NELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
E+ YE N ++I+ S+ M +
Sbjct: 121 EEMINMISATRAYEANAQVIEATKSIAMRAL 151
>gi|295400718|ref|ZP_06810695.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977299|gb|EFG52900.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 285
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL 53
A+ L ++ ++S NIAN++T ++ ++ +SF +L Q F
Sbjct: 9 TAANTMAQLQQQLDVISNNIANSNTAGFKRRE-TSFGELLAQQFA 52
>gi|251799752|ref|YP_003014483.1| hypothetical protein Pjdr2_5791 [Paenibacillus sp. JDR-2]
gi|247547378|gb|ACT04397.1| protein of unknown function DUF1078 domain protein [Paenibacillus
sp. JDR-2]
Length = 275
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
AS N L ++ ++++NIAN +T Y+ K+ ++FE +LN
Sbjct: 8 ASVSMNALQQKLDMLADNIANVNTVGYKRKE-ATFEDLLNNT 48
>gi|297585403|ref|YP_003701183.1| fagellar hook-basal body protein [Bacillus selenitireducens
MLS10]
gi|297143860|gb|ADI00618.1| fagellar hook-basal body protein [Bacillus selenitireducens
MLS10]
Length = 277
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK--DISSFETILNQNFL 53
A Q+++S NIAN +TP ++A + +F +L Q
Sbjct: 7 TAGAGMISQQRNQEMLSNNIANVNTPGFKADQGSLRTFPNMLIQAMG 53
>gi|254437698|ref|ZP_05051192.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
307]
gi|198253144|gb|EDY77458.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
307]
Length = 257
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETHLKES 65
+A N R ++++ N++N +T +++ D +FE++L ++ + T L +
Sbjct: 3 VAKTGLNAQQTRMQVIANNLSNLNTVGFKS-DRVNFESLLYQVSRAGGDQTSEGTALTSA 61
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
+ G A + Q V N+ +
Sbjct: 62 LALGTGVRAVNTQKLYTQGGMVNTD-NSFDL 91
>gi|330809230|ref|YP_004353692.1| flagellar basal-body rod protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327377338|gb|AEA68688.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 257
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I IAS +S N+AN T Y+ + F ++ + R +
Sbjct: 2 IDSLSIASSGLTANQAWIDSISNNVANMQTIGYKRSQV-DFHDMVREVG--TRDDGGGMT 58
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
ES +G A T V+ SGN + + +
Sbjct: 59 ESLLTGAGIQASQPSQVFSPGT-VRESGNALDLAIQ 93
>gi|221199739|ref|ZP_03572782.1| flagellar basal body protein FlaE [Burkholderia multivorans
CGD2M]
gi|221208656|ref|ZP_03581656.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
gi|221171467|gb|EEE03914.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
gi|221179978|gb|EEE12382.1| flagellar basal body protein FlaE [Burkholderia multivorans
CGD2M]
Length = 413
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTALASVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|51894141|ref|YP_076832.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
14863]
gi|51857830|dbj|BAD41988.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
14863]
Length = 147
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 20/144 (13%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN------YRAKDI------SSFETIL 48
+ FQ A+ L+ R +++ N+AN T YR + + ++F + L
Sbjct: 1 MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASEL 60
Query: 49 NQNFLMARTHETHLKES----DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
+ ++ + D S D TG+ N V + E+
Sbjct: 61 ARQAGRPAEPGLGVRVTQIVEDPSPFKEVHDPTHPDADPVTGIVRLPN-VDLLQEITDLM 119
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
+ +Y+ N +M + +
Sbjct: 120 LAQRMYDANLTAFNAAKNMALRAL 143
>gi|85715030|ref|ZP_01046015.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
gi|85698227|gb|EAQ36099.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
Length = 620
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
M + IA IVS N+ANA+TP Y A+ +
Sbjct: 1 MSLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTL 41
>gi|170694392|ref|ZP_02885546.1| protein of unknown function DUF1078 domain protein [Burkholderia
graminis C4D1M]
gi|170140815|gb|EDT08989.1| protein of unknown function DUF1078 domain protein [Burkholderia
graminis C4D1M]
Length = 502
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A ++ + S + +
Sbjct: 19 VIGNNIANANTVGFKS-GAAQFADMYANSVATAVGNQIGIGTKLSEVQQQFSQGTITSTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALDVAINGN 87
>gi|30019789|ref|NP_831420.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 14579]
gi|29895334|gb|AAP08621.1| Flagellar basal-body rod protein flgC [Bacillus cereus ATCC 14579]
Length = 137
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANASTPNYRAKDI-----------SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+TP D+ +SF ++L+ A T+ +K ++
Sbjct: 19 MQVTSNNIVNANTPAAPGADLYERRSVVLESNNSFASMLDG----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|317130723|ref|YP_004097005.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
2522]
gi|315475671|gb|ADU32274.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
2522]
Length = 274
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A RQ++++ N+AN TP Y+A D +S + NQ T+ H+++ ++
Sbjct: 8 AGAGMITQQRRQEMLTNNLANIETPGYKA-DQASIRSFPNQLIQAMGTN--HMQKFGTN 63
>gi|262364764|gb|ACY61321.1| flagellar hook protein [Yersinia pestis D182038]
Length = 288
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
F IA+ N +E+ +S NIAN++T ++A + F ++ Q+ +
Sbjct: 3 FSIANTALNAHTEQLNTISNNIANSATKGFKASR-TEFSSMYAQSQPLGVA 52
>gi|163782129|ref|ZP_02177128.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
128-5-R1-1]
gi|159882661|gb|EDP76166.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
128-5-R1-1]
Length = 242
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F I S + + + N+AN TP+++ F + + M E
Sbjct: 7 PLF-ILSSGMLLQERKLAVTTNNLANLDTPSFK----RDFVEVSSWYTDMGAQVPNLSPE 61
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+ ++ + ++ +GNT + E
Sbjct: 62 NPTNNFVYPMMTRIFTDLSQGSLRETGNTFDLAIE 96
>gi|157373209|ref|YP_001471809.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
HAW-EB3]
gi|157315583|gb|ABV34681.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
HAW-EB3]
Length = 139
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 10/132 (7%)
Query: 6 FFQIASQHANWLSERQKIVSENIAN----ASTPNYRAKDISS-FETILNQNFLMARTHET 60
+QIA + S R V+ N+AN A T + + + F TI NQ +
Sbjct: 6 IYQIAGAGMHAQSIRLNTVASNLANAGAAAETQDSAYRALKPVFSTIYNQTQAGEVSGAQ 65
Query: 61 HLKES---DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
+ + L D+ V S V E+ +E + +++
Sbjct: 66 VEVAAIVETDAPLDMRYEPDHPFADEQGYVAYS--NVNTVEEMADMMAASRSFETSVEVM 123
Query: 118 KKLNSMVMHVVR 129
+ SM +++
Sbjct: 124 NQARSMQQGLLQ 135
>gi|159045792|ref|YP_001534586.1| flagellar basal body rod protein FlgG [Dinoroseobacter shibae DFL
12]
gi|157913552|gb|ABV94985.1| flagellar basal-body rod protein FlgG [Dinoroseobacter shibae DFL
12]
Length = 261
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---RTHET 60
+ IA+ + R +++S N+AN +T Y A+ + Q + T
Sbjct: 1 MRALTIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQVKAPGTINASDGT 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
L GL A + L Q + Q G
Sbjct: 61 ALPTGVQLGLGVRAAAVTVELSQGSLSQTGG 91
>gi|75675315|ref|YP_317736.1| flagellar basal body rod protein FlgF [Nitrobacter winogradskyi
Nb-255]
gi|74420185|gb|ABA04384.1| Flagellar basal body rod protein [Nitrobacter winogradskyi
Nb-255]
Length = 255
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ ++ Q L + +++ N+AN +T Y+A D S F L
Sbjct: 1 MENTLLIGLSRQMM--LERQMDVIANNVANVTTNGYKA-DHSLFNEYLMPGAHEDNFVGR 57
Query: 61 HLKES---DSSGLHWNAHVIEAPLDQTTGVQVSGNT 93
+ S D + H A V + GN
Sbjct: 58 DRRLSFVQDRATFHDFAGGPTEQTKNPLDVAIDGNA 93
>gi|206558968|ref|YP_002229728.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
gi|198035005|emb|CAR50877.1| flagellar hook protein 1 FlgE1 [Burkholderia cenocepacia J2315]
Length = 413
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + S +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFADMYANSVATSVNTQIGIGTSLNSVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|160880851|ref|YP_001559819.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
ISDg]
gi|160429517|gb|ABX43080.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
ISDg]
Length = 150
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 24/146 (16%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS-------SFETI 47
M I++ + R I+S+NIAN T YR K + SF T+
Sbjct: 1 MSIFNGMNISASGMSAQRLRMDIISQNIANVETTRDENGNPYRRKTVVFSERESGSFGTV 60
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTT-GVQVSG-------NTVGITNE 99
L Q + ++ + + ++ + + G NTV E
Sbjct: 61 LAQKAASKASDTQGNGVKVTAIVEDHVTAMKRVYNPSHPDADQDGYVTMPNVNTV---TE 117
Query: 100 LYKSGHIKYLYELNTKLIKKLNSMVM 125
+ YE N +M++
Sbjct: 118 MTNLISATRSYEANVTAFNATKNMLL 143
>gi|89895737|ref|YP_519224.1| hypothetical protein DSY2991 [Desulfitobacterium hafniense Y51]
gi|89335185|dbj|BAE84780.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 176
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 49/171 (28%), Gaps = 43/171 (25%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN-------------------YRAKDI 41
M I++ R ++S NIAN +T ++A+
Sbjct: 1 MGIFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEGGNQIPYQRQVVVFKARGT 60
Query: 42 -SSFETILNQNFLMARTHETHLKESDSS-GLHWNAHVIEAPLDQT--------------T 85
SSF LNQ T L + ++ G N ++A + T
Sbjct: 61 ESSFAETLNQALQGRSVSTTALLQGQTTLGTTGNGVEVQAIAEDTLPFRLEYNPDSPDAA 120
Query: 86 GVQVSG--------NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
G V I E+ YE N + +M+ +
Sbjct: 121 QTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMTKAL 171
>gi|323703191|ref|ZP_08114844.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
574]
gi|323531850|gb|EGB21736.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
574]
Length = 260
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 20/63 (31%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +SG E + + + V + E+ + Y N + I+ +
Sbjct: 190 YSPTTASGEATEGTPGEDGVGLIRQGYLERSNVDLAQEMLGMIEAQRAYAANARTIQTAD 249
Query: 122 SMV 124
M
Sbjct: 250 EMW 252
>gi|320354341|ref|YP_004195680.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
2032]
gi|320122843|gb|ADW18389.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
2032]
Length = 244
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A A + V+ N+AN ST ++ KD SF IL + + G
Sbjct: 8 ALSGAVAREQAMSNVAANLANVSTTGFK-KDRISFAAILRGAQQASDARGINFARIRKIG 66
Query: 70 LHWNAHVIEAPLDQTTGVQVSG 91
+ ++ ++ P D+ V + G
Sbjct: 67 VDFSQGGMQ-PTDRPLDVAIDG 87
>gi|313903629|ref|ZP_07837019.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
13965]
gi|313466182|gb|EFR61706.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
13965]
Length = 272
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA-KDIS-SFETILNQNFLMARTHETHLKESD 66
A+ +Q+ ++ ++AN +TP Y+A ++++ +F +L +
Sbjct: 30 TAASGMLARVLQQERLAGDLANVNTPGYKASRNVTEAFPELLLSRLDGTGAPVVGPLGTG 89
Query: 67 SSGLHWNAHVIEAPLDQTTGVQ 88
+ A + P T Q
Sbjct: 90 TVVAEPGADMRPGPWVTTGRPQ 111
>gi|296157456|ref|ZP_06840291.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
gi|295892228|gb|EFG72011.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
Length = 503
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A ++ + + + +
Sbjct: 19 VIGNNIANANTVGFKS-GAAQFADMYANSVATAVGNQIGIGTKLADVQQQFSQGTITSTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALDVAINGN 87
>gi|237752809|ref|ZP_04583289.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
ATCC BAA-430]
gi|229376298|gb|EEO26389.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
ATCC BAA-430]
Length = 277
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 20 RQKIVSENIANASTPNYRAKDI 41
R +++ NIANA+T ++ D+
Sbjct: 18 RLDVIANNIANANTTGFKRDDV 39
>gi|116250500|ref|YP_766338.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
3841]
gi|115255148|emb|CAK06222.1| flagellar hook protein (agr_c_1012p) [Rhizobium leguminosarum bv.
viciae 3841]
Length = 433
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R V++NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSSTDLAISGDG 89
>gi|323703177|ref|ZP_08114830.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans
DSM 574]
gi|323531836|gb|EGB21722.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans
DSM 574]
Length = 256
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
R +V NIAN +T ++A + +F+ ++Q A
Sbjct: 15 HQIRMDVVGNNIANVNTNGFKASRV-NFQDAISQTMRSASGTPA 57
>gi|187926954|ref|YP_001893299.1| flagellar basal body FlaE domain protein [Ralstonia pickettii
12J]
gi|241665283|ref|YP_002983642.1| flagellar hook protein FlgE [Ralstonia pickettii 12D]
gi|187728708|gb|ACD29872.1| flagellar basal body FlaE domain protein [Ralstonia pickettii
12J]
gi|240867310|gb|ACS64970.1| protein of unknown function DUF1078 domain protein [Ralstonia
pickettii 12D]
Length = 402
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A ++
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQ 54
>gi|325288806|ref|YP_004264987.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
8271]
gi|324964207|gb|ADY54986.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
8271]
Length = 257
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 8 QIASQHANWLSERQK--IVSENIANASTPNYR--AKDISSFETILNQNFLMARTHETHLK 63
+ + A L+ Q+ + +NI N TP YR ++ + +F +L + + T ++
Sbjct: 4 GLYTAAAGMLANNQQSDTIDQNIENLKTPGYRQASEKLQAFPAMLVERMEPSSTEPVVME 63
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGV-QVSGNTVGI 96
+ L + G+ + +GN +
Sbjct: 64 RTPIGSLGTGVQIESVMYQDGPGMLRETGNQTDV 97
>gi|283784086|ref|YP_003363951.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
gi|282947540|emb|CBG87093.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
Length = 261
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L G + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQGNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVM 125
YE+N K++ + M+
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255
>gi|212640499|ref|YP_002317019.1| flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
gi|212561979|gb|ACJ35034.1| Flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
Length = 262
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTHETHLKESD 66
A+ R ++++ NIANA+TP Y+A + +F +L T T K +
Sbjct: 7 TAASGMLSQQRRIEMMTNNIANANTPGYKADQASLRAFPEMLMHRIQ-QTTIPTEKKLTW 65
Query: 67 S-----SGLHWNAHVIE-APLDQTTGVQVSGNTVGI 96
L +V E P ++ +GN +
Sbjct: 66 RDRTYIGPLSTGVYVQELVPNFAQGDIRETGNNTDM 101
>gi|313673416|ref|YP_004051527.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940172|gb|ADR19364.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 822
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 6 FFQIASQHANWLSERQK---IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
+ + LS+ QK ++ N++N +T Y+A ++ F+ +++Q + + ++
Sbjct: 1 MLRSLYSAVSGLSQHQKAMDVLGNNVSNVNTVGYKASRLT-FKDLMSQTVSIGKAPSGNI 59
Query: 63 KESDSSGLHWNAHVIEA------PLDQTTGVQVS 90
+ + +V QTTGV
Sbjct: 60 GGINPLQIGLGTNVASVDNIFLQGTFQTTGVTTD 93
>gi|255598721|ref|XP_002537067.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
gi|223517602|gb|EEF25316.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
Length = 121
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 10/121 (8%)
Query: 14 ANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+ S R V+ N+ANA + Y++K + F+ + + + + E
Sbjct: 1 MSAQSMRLNTVASNLANADSVVSSDGKPYQSKQVV-FKAVQDAANKSSTVEVERVIEDTK 59
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
G + V +T E+ Y+ N + + +M++
Sbjct: 60 PGKMVYDPKHPMANADGYITMPN---VNVTEEMVNMISASRAYQNNVETMNAAKTMLLKT 116
Query: 128 V 128
+
Sbjct: 117 L 117
>gi|206896555|ref|YP_002246691.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
5265]
gi|206739172|gb|ACI18250.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
5265]
Length = 519
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
R ++S NIAN +T Y+A ++F ++ AR ++ S +
Sbjct: 10 SGLKVHQIRIDVISNNIANVNTTAYKAAR-ATFSDVVALTLKGARAPYGGRGGTNPSQVG 68
Query: 72 WNAHVIEAPLDQTTGVQVSGN 92
+ T G + N
Sbjct: 69 LGVGLATIDNIMTQGPTNNTN 89
>gi|218674739|ref|ZP_03524408.1| flagellar hook protein FlgE [Rhizobium etli GR56]
Length = 433
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R V++NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTSGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSTTDLAISGDG 89
>gi|218288303|ref|ZP_03492602.1| protein of unknown function DUF1078 domain protein
[Alicyclobacillus acidocaldarius LAA1]
gi|218241662|gb|EED08835.1| protein of unknown function DUF1078 domain protein
[Alicyclobacillus acidocaldarius LAA1]
Length = 301
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A +V NIAN T ++ D+ F +L+Q + S
Sbjct: 8 AISGMQAFQTDLDVVGNNIANVETVGFKQSDVQ-FADLLSQTMSLGTA---GTSPSTGGS 63
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITN 98
P GVQV+ + ++
Sbjct: 64 GATTGIGGTNPEQVGLGVQVAATQMDMSQ 92
>gi|163789629|ref|ZP_02184067.1| flagellar hook-basal body complex protein [Carnobacterium sp.
AT7]
gi|159875161|gb|EDP69227.1| flagellar hook-basal body complex protein [Carnobacterium sp.
AT7]
Length = 252
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
I S N L ++Q+ +S N+AN +T Y++++I
Sbjct: 2 IRSLTTLSNSINILQKKQENISANVANINTSGYKSQEI 39
>gi|325529014|gb|EGD06027.1| flagellar hook protein FlgE [Burkholderia sp. TJI49]
Length = 413
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTTLASVQQQFGQGAINATS 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|220904841|ref|YP_002480153.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869140|gb|ACL49475.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 145
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M +T F I++ R +S N+ANA T YR + + F
Sbjct: 1 MDFMTAFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFSV 60
Query: 47 ILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSG 104
+ A + + + + P G N V E+
Sbjct: 61 HMRSALDRAVKGVRVMAVTMDNRPFKRVYEPGNPDANAEGYVMYPDINVV---EEMANLM 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
+ +E N + + M + +
Sbjct: 118 TAQRNFEANVTTVDAIKGMYVKAL 141
>gi|307731363|ref|YP_003908587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
gi|307585898|gb|ADN59296.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
Length = 502
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A ++ + S + +
Sbjct: 19 VIGNNIANANTVGFKS-GAAQFADMYANSVATAVGNQVGIGTKLSEVQQQFSQGTITSTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALDVAINGN 87
>gi|83646783|ref|YP_435218.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
2396]
gi|83634826|gb|ABC30793.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
2396]
Length = 133
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 7/132 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA----KDISSFETILNQNFLMAR 56
M + F I+ ++ R + V+ N+AN + + +A K + + T +
Sbjct: 1 MDYLQVFDISGSGLDFQKLRLQAVATNLANVYSTSSKAGAAFKPLMAVATAEQSGGSLRG 60
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ L E D + N V E+ YE N +
Sbjct: 61 VGDMQLVERDVEPRLKYDPAHPHANADGYVEMPAINPVD---EMTSMMLATRAYEANVSV 117
Query: 117 IKKLNSMVMHVV 128
+ +M + +
Sbjct: 118 LSAAKTMALKAL 129
>gi|153951334|ref|YP_001397315.1| flagellar hook protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152938780|gb|ABS43521.1| flagellar hook protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 545
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I + NIAN +T ++ D + F+ I T+ G A + +
Sbjct: 21 ITANNIANVNTTGFKYSD-AQFKDIFYNTITTQSTNPA------QGGYGSGAASSQVVFE 73
Query: 83 QTTGVQVSG 91
Q + + G
Sbjct: 74 QGSPIASDG 82
>gi|167568107|ref|ZP_02361023.1| flagellar hook protein FlgE [Burkholderia oklahomensis EO147]
gi|167574225|ref|ZP_02367099.1| flagellar hook protein FlgE [Burkholderia oklahomensis C6786]
Length = 413
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFADMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|299068732|emb|CBJ39971.1| flagellar hook protein FlgE [Ralstonia solanacearum CMR15]
Length = 401
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A ++
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQ 54
>gi|218703527|ref|YP_002411046.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
gi|218430624|emb|CAR11490.1| Flagellar basal-body rod protein (flgG-like) (Distal rod protein)
[Escherichia coli UMN026]
Length = 303
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 220 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 279
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 280 RAYEMNAKMVSAADDMLQYISQ 301
>gi|208434813|ref|YP_002266479.1| flagellar hook protein [Helicobacter pylori G27]
gi|208432742|gb|ACI27613.1| flagellar hook protein [Helicobacter pylori G27]
Length = 605
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETHLKESDSSGLHWNAHVIE 78
+S NIAN +T YR+ D F+T+ + N T++ + + S + N
Sbjct: 22 LSNNIANVNTLGYRSND-PEFKTLFSSHLDALNAKSVVTNDRNYGVTGSGNVLSNKDGEY 80
Query: 79 APLDQTTGVQVSG 91
P + + G
Sbjct: 81 MPSEGEFHMAYQG 93
>gi|154253003|ref|YP_001413827.1| flagellar basal body rod protein FlgG [Parvibaculum
lavamentivorans DS-1]
gi|154156953|gb|ABS64170.1| flagellar basal-body rod protein FlgG [Parvibaculum
lavamentivorans DS-1]
Length = 261
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S NIAN ST ++ + + F+ +L QN + +
Sbjct: 1 MQSLSIAATGMMAQQLNVEVISNNIANMSTTGFK-RGRAEFQDLLYQNLRRVGANSSDAG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
SG+ V A +++
Sbjct: 60 TIVPSGVQVGLGVKTAAVNR 79
>gi|283780143|ref|YP_003370898.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM
6068]
gi|283438596|gb|ADB17038.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM
6068]
Length = 565
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
M ++ QIA+ ++V NIANA+TP Y + +
Sbjct: 1 MTLLSTLQIANNSLIASQLGLQVVGNNIANANTPGYIRQQV 41
>gi|168699694|ref|ZP_02731971.1| flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
Length = 238
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A SE+Q++ + N+A+++TP YR + + FE+ L+++ A + + +
Sbjct: 5 AGSALVIASEQQEVTAHNLAHSTTPGYRERGLV-FES-LDRHIGHAEEPTGDITGARTVQ 62
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
+ + Q TG G + LN
Sbjct: 63 AYND---FRPGPIQQTGHPYD----------LAIGEADRFFVLN 93
>gi|163744346|ref|ZP_02151706.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
gi|161381164|gb|EDQ05573.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
Length = 422
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 1/93 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + QI S R + +S NIANA+T YR + S F T + +
Sbjct: 1 MSITSALQIGVSGLQANSSRVQNISSNIANANTVGYR-RTFSEFVTQNTGSTQAGVLTDV 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNT 93
S + + + + VS N
Sbjct: 60 RANISTNGNIVGTNSTTDLAVQGDGFFVVSRNA 92
>gi|296133040|ref|YP_003640287.1| fagellar hook-basal body protein [Thermincola sp. JR]
gi|296031618|gb|ADG82386.1| fagellar hook-basal body protein [Thermincola potens JR]
Length = 419
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
R ++ NIAN +T Y+ K ++F+ IL+QN A +
Sbjct: 10 SGLRNHQVRMDVIGNNIANVNTIGYK-KARATFQDILSQNIRGASS 54
>gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774288|gb|ABC81125.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
Length = 266
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ R +++ N+AN T ++ + + FE +L++ A + + +
Sbjct: 12 TAATGMEAQQLRMDVIANNLANTGTTGFKRQR-AEFEDLLSETVRGAEAPDPR-GGTAPA 69
Query: 69 GLHWNAHVIEAPLDQTTG---VQVSGNTVGITNE 99
L V + G + +GN + + E
Sbjct: 70 PLQVGLGVRTGSTVRNFGQGELLTTGNALDLAVE 103
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 28/78 (35%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ L ++ +SG +A E + G V E+ +
Sbjct: 183 FPNPGGLEAAGGNLLLQTAASGEAVDARPGEQGAGTLAQGFLEGANVKAVEEMIDMIATQ 242
Query: 108 YLYELNTKLIKKLNSMVM 125
YELN+++++ + M+
Sbjct: 243 RAYELNSRVVQTADQMLQ 260
>gi|91785634|ref|YP_560840.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
LB400]
gi|91689588|gb|ABE32788.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
LB400]
Length = 503
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A ++ + + + +
Sbjct: 19 VIGNNIANANTVGFKS-GAAQFADMYANSVATAVGNQIGIGTKLADVQQQFSQGTITSTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALDVAINGN 87
>gi|329849714|ref|ZP_08264560.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
C19]
gi|328841625|gb|EGF91195.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
C19]
Length = 263
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
+A+Q N +++S NIAN +T ++ K + F+ +L QN + +
Sbjct: 10 GMAAQQLNV-----EVISNNIANMNTVGFK-KQRAEFQDLLYQNIERMGSQSSDAGTVVP 63
Query: 68 SGLHWNAHV 76
+G+ A V
Sbjct: 64 TGIQVGAGV 72
>gi|285018207|ref|YP_003375918.1| flagellar basal-body rod protein flgg [Xanthomonas albilineans
GPE PC73]
gi|283473425|emb|CBA15930.1| probable flagellar basal-body rod protein flgg [Xanthomonas
albilineans]
Length = 261
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL---NQNFLMARTHETHLKES 65
+A + R +VS N+AN ST ++ +D +SFE +L + A + +T L
Sbjct: 7 VAKTGMDAQQTRMSVVSNNLANTSTTGFK-RDRASFEDLLYQQRRQPGGASSSQTQLPSG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQV 89
G +Q + Q
Sbjct: 66 LQLGTGVRVVATSKDFEQGSQQQT 89
>gi|17548566|ref|NP_521906.1| flagellar hook protein FlgE [Ralstonia solanacearum GMI1000]
gi|17430814|emb|CAD17496.1| probable flagellar hook protein flge [Ralstonia solanacearum
GMI1000]
Length = 401
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A ++
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQ 54
>gi|197122909|ref|YP_002134860.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
gi|220917701|ref|YP_002493005.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
dehalogenans 2CP-1]
gi|196172758|gb|ACG73731.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
gi|219955555|gb|ACL65939.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 266
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 1 MQPITFFQ---IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
M+ I + A+ R +++ N+AN T ++ + + FE +L++ A
Sbjct: 1 MKGIPVLRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQR-AEFEDLLSETIHGAEA 59
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTG---VQVSGNTVGITNE 99
+ + + L V + G + +GN + + E
Sbjct: 60 PDPR-GGTAPAALQVGLGVRTGSTVRNFGQGELLTTGNALDLAIE 103
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 28/78 (35%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ L ++ +SG +A E + G V E+ +
Sbjct: 183 FPNPGGLEAAGGNLLLQTAASGEAVDARPGEQGAGTLAQGFLEGANVKAVEEMIDMIATQ 242
Query: 108 YLYELNTKLIKKLNSMVM 125
YELN+++++ + M+
Sbjct: 243 RAYELNSRVVQTADQMLQ 260
>gi|150020364|ref|YP_001305718.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
BI429]
gi|149792885|gb|ABR30333.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
BI429]
Length = 261
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
E+ +SG + V + V I E+ YELN++ ++ + M
Sbjct: 193 ETPASGAPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISAMRAYELNSRTVQTADEM 252
Query: 124 VMHV 127
+
Sbjct: 253 LRTA 256
>gi|114706771|ref|ZP_01439671.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
gi|114537719|gb|EAU40843.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
Length = 260
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ N ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMNAQETNVEVIANNIANVNTTGFK-RARAEFTDLLYQVERAKGVAAAGAE 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTT---GVQVSGNTVGI 96
G V A + ++ +GN + +
Sbjct: 60 GVVPEGAQLGLGVRLAAIRNVHLQGALKETGNKLDL 95
>gi|219670133|ref|YP_002460568.1| hypothetical protein Dhaf_4123 [Desulfitobacterium hafniense
DCB-2]
gi|219540393|gb|ACL22132.1| protein of unknown function DUF1078 domain protein
[Desulfitobacterium hafniense DCB-2]
Length = 329
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
+ A+ ++ N++N +TP Y+A+ + +F L A
Sbjct: 1 MRILNTAATGVRAQQTALDVLGNNMSNVNTPGYKAQRV-NFAEALAAEMRPAE 52
>gi|332531618|ref|ZP_08407515.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
gi|332038981|gb|EGI75410.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
Length = 512
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
I++ +N T + +++F + ++ T E+ +SG E L
Sbjct: 408 IITARFSNGETQAFGQLALANFRNV----QGLSPTGNGEWIETQASGQPIFGGPTEGNLG 463
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ + ++V +T EL + Y+ N + IK + ++ +V
Sbjct: 464 ELRSGALEESSVDLTKELVNMMTAQRTYQANAQTIKTQDQVMQTLV 509
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S ++ NIANA+T +++ + F + + + +
Sbjct: 3 FQQGLSGLNASSRSLDVIGNNIANANTTGFKSGR-AEFGDVFASSIGASGAGTIGIGVEV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG 91
S+ A + V ++G
Sbjct: 62 STVSQQFTQGNIAITNNDLDVAING 86
>gi|289548424|ref|YP_003473412.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
14484]
gi|289182041|gb|ADC89285.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
14484]
Length = 137
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 14/123 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ F++++ R +++ N+AN + Y ++ + + + A
Sbjct: 2 MEVFKVFEVSASGMYAQRVRINVIASNLANYES--YT-REGEPYRRL--EPVFEAVETPG 56
Query: 61 HLKESDSSGLHWNAHVIEAPLD---QTTGVQVSGN------TVGITNELYKSGHIKYLYE 111
+L + +AP T + + V +T E+ YE
Sbjct: 57 NLSKGLVPVRVVEIRRSDAPFRLLFDPTNPRADRDGFVRLPNVDVTAEMVDMLSALRSYE 116
Query: 112 LNT 114
N
Sbjct: 117 ANL 119
>gi|304316900|ref|YP_003852045.1| fagellar hook-basal body protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778402|gb|ADL68961.1| fagellar hook-basal body protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 420
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A ++ NIAN +T ++A ++ F+ I NQ A + ++
Sbjct: 8 AVSGLKAHQAEMDVIGNNIANVNTVGFKASRMT-FKEIFNQTIKGASAPQGSGGGTNPQQ 66
Query: 70 LHWNAHVI----------EAPLDQTTGVQVSGN 92
+ + D T + + GN
Sbjct: 67 VGLGVAIASIDTLFTNGGSQRTDNPTDLSIDGN 99
>gi|237810461|ref|YP_002894912.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
gi|237503327|gb|ACQ95645.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
Length = 413
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|205375362|ref|ZP_03228152.1| flagellar basal-body rod protein [Bacillus coahuilensis m4-4]
Length = 270
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMAR 56
A+ + + ++ N+ANA+TP ++A + SF +L +
Sbjct: 7 TAASGMIAQQRKTETLANNLANANTPGFKADQTSVRSFPEMLLMSVGQGT 56
>gi|23099008|ref|NP_692474.1| flagellar basal body rod protein FlgC [Oceanobacillus iheyensis
HTE831]
gi|22777236|dbj|BAC13509.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
Length = 151
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 22/147 (14%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN-----------YRAKDIS------S 43
++ F + A+ L+ R IVS N+ANA + YR K ++
Sbjct: 1 MSIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQ 60
Query: 44 FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP--LDQTTGVQVSGNTVGITNELY 101
F+ +L + T + +K + + + +++ P D V V E+
Sbjct: 61 FKNVLKHATSSSSTSTSGVKATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMV 120
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N M+M +
Sbjct: 121 DLMSATRSYEANITAFNASKGMLMKAL 147
>gi|300696913|ref|YP_003747574.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
gi|299073637|emb|CBJ53157.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
Length = 401
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A ++
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQ 54
>gi|312112590|ref|YP_003990906.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
gi|311217691|gb|ADP76295.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
Length = 285
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
A+ L ++ ++S NIAN++T ++ ++ +SF +L Q F
Sbjct: 9 TAANTMAQLQQQLDVISNNIANSNTAGFKRRE-TSFGELLAQQF 51
>gi|94987301|ref|YP_595234.1| flagellar basal body rod protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731550|emb|CAJ54913.1| Flagellar basal body rod protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 146
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDI--------SSFET 46
M +T F I + + + + N+ANA T YR K + F
Sbjct: 1 MDFMTAFDIGASALSADRTTINVTAMNLANAKTTRTPEGGPYRRKTVIRAATDVDEPFSK 60
Query: 47 ILNQNF--LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
+ + ++ + + N V E+
Sbjct: 61 QMQSALDRELKGVRILNVLPDNRPPKQIYEPGHPDADENGMVSYPDINVV---EEMANLM 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N+ I + +M M +
Sbjct: 118 TASRNYEANSTTIDTVKNMYMRAL 141
>gi|83719411|ref|YP_440801.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
gi|167617585|ref|ZP_02386216.1| flagellar hook protein FlgE [Burkholderia thailandensis Bt4]
gi|257140548|ref|ZP_05588810.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
gi|83653236|gb|ABC37299.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
Length = 413
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|39933177|ref|NP_945453.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
palustris CGA009]
gi|192288534|ref|YP_001989139.1| hypothetical protein Rpal_0101 [Rhodopseudomonas palustris TIE-1]
gi|39652802|emb|CAE25541.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
palustris CGA009]
gi|192282283|gb|ACE98663.1| protein of unknown function DUF1078 domain protein
[Rhodopseudomonas palustris TIE-1]
Length = 136
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRA---KDISSFETILNQNFLMARTH---- 58
IA N + R ++ + NIAN + + + + +T
Sbjct: 4 IASIAVSGLNAATRRLEVSASNIANQRSTGALPGADGTVPPGAPQAYKPLQVNQTDTPTG 63
Query: 59 ETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIK 118
T + +S +AP G+ + N V + E KY Y N ++
Sbjct: 64 GTQTSLATTSPATVPVSDPQAPFADADGMVAAPN-VDLAQEFIGQMVAKYSYTANLASLQ 122
Query: 119 KLNSMVMHVV 128
M ++
Sbjct: 123 ADRDMTKALL 132
>gi|83747654|ref|ZP_00944690.1| FlgE [Ralstonia solanacearum UW551]
gi|207728346|ref|YP_002256740.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
gi|207739737|ref|YP_002258130.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
gi|83725706|gb|EAP72848.1| FlgE [Ralstonia solanacearum UW551]
gi|206591592|emb|CAQ57204.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
gi|206593119|emb|CAQ60025.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
Length = 401
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A ++
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQ 54
>gi|295707198|ref|YP_003600273.1| flagellar hook-basal body complex protein FlhP [Bacillus
megaterium DSM 319]
gi|294804857|gb|ADF41923.1| flagellar hook-basal body complex protein FlhP [Bacillus
megaterium DSM 319]
Length = 273
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ L ++ ++ N++N +T Y+A+D +SF +L Q T + + +
Sbjct: 7 TAANTMGQLQQQLDVIGHNLSNTNTTGYKARD-ASFNDMLYQQVNNQEDKGTEKRLTPAG 65
>gi|218461961|ref|ZP_03502052.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
Length = 316
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R V++NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSTTDLAISGDG 89
>gi|149191155|ref|ZP_01869413.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
gi|148834993|gb|EDL51972.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
Length = 261
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 29/80 (36%)
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+A E++ SG Q + G+ V + E+ +
Sbjct: 180 NPAGLAAQGGNLFAETEGSGEAVELVAGTEGSGQLKQGALEGSNVQVVEEMVDMIATQRA 239
Query: 110 YELNTKLIKKLNSMVMHVVR 129
YE++ K++ + M+ ++ +
Sbjct: 240 YEMSAKMVSAADEMLQYIAQ 259
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I+ + +S N+AN +T ++ +D FE + A T T L E +
Sbjct: 7 ISKTGMAAQDAKMTAISNNLANINTVGFK-RDRVVFEDLFYSVDKQAGTETTELNEHPTG 65
>gi|117928057|ref|YP_872608.1| hypothetical protein Acel_0849 [Acidothermus cellulolyticus 11B]
gi|117648520|gb|ABK52622.1| protein of unknown function DUF1078 domain protein [Acidothermus
cellulolyticus 11B]
Length = 398
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI----- 77
+V NIAN +T ++A + FE L+Q A + ++ + + +
Sbjct: 21 VVGNNIANVNTVGFKASQVE-FEDTLSQMLRAAGAPQGVQGGTNPAQVGLGVQIAAISTT 79
Query: 78 -EAPLDQTTGVQVS 90
+TTGV
Sbjct: 80 FTQGPAETTGVDTD 93
>gi|300693338|ref|YP_003749311.1| flagellar hook protein flge [Ralstonia solanacearum PSI07]
gi|299075375|emb|CBJ34670.1| flagellar hook protein FlgE [Ralstonia solanacearum PSI07]
Length = 401
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
FQ + S+ ++ N+ANA+T Y+ K + F + ++ + A ++
Sbjct: 3 FQQGLSGLDAASKNLDVIGSNVANANTVGYK-KSTAEFGDVYARSLVGASDNQ 54
>gi|296534159|ref|ZP_06896653.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
49957]
gi|296265514|gb|EFH11645.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
49957]
Length = 248
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ NIANA TP Y++ + F +++ +
Sbjct: 20 AALAMNIANADTPGYKSAQMV-FGAHIDRQLGVDAPRGG 57
>gi|53717914|ref|YP_106900.1| flagellar hook protein FlgE [Burkholderia pseudomallei K96243]
gi|53724565|ref|YP_104798.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
gi|67641538|ref|ZP_00440315.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
gi|76810959|ref|YP_331879.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1710b]
gi|121599135|ref|YP_994291.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
gi|124384593|ref|YP_001028060.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
gi|126449658|ref|YP_001082867.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
gi|126453793|ref|YP_001064564.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1106a]
gi|167001537|ref|ZP_02267332.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
gi|167717660|ref|ZP_02400896.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
gi|167736703|ref|ZP_02409477.1| flagellar hook protein FlgE [Burkholderia pseudomallei 14]
gi|167813802|ref|ZP_02445482.1| flagellar hook protein FlgE [Burkholderia pseudomallei 91]
gi|167822318|ref|ZP_02453789.1| flagellar hook protein FlgE [Burkholderia pseudomallei 9]
gi|167843908|ref|ZP_02469416.1| flagellar hook protein FlgE [Burkholderia pseudomallei B7210]
gi|167892410|ref|ZP_02479812.1| flagellar hook protein FlgE [Burkholderia pseudomallei 7894]
gi|167900908|ref|ZP_02488113.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC
13177]
gi|167909127|ref|ZP_02496218.1| flagellar hook protein FlgE [Burkholderia pseudomallei 112]
gi|167917164|ref|ZP_02504255.1| flagellar hook protein FlgE [Burkholderia pseudomallei BCC215]
gi|217424944|ref|ZP_03456440.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
gi|226199793|ref|ZP_03795344.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
Pakistan 9]
gi|242315744|ref|ZP_04814760.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1106b]
gi|254182140|ref|ZP_04888737.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1655]
gi|254188070|ref|ZP_04894582.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
Pasteur 52237]
gi|254196353|ref|ZP_04902777.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
gi|254201896|ref|ZP_04908260.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
gi|254207230|ref|ZP_04913581.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
gi|254259636|ref|ZP_04950690.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1710a]
gi|254295814|ref|ZP_04963271.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
406e]
gi|254359732|ref|ZP_04976003.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
gi|52208328|emb|CAH34261.1| putative flagellar hook protein [Burkholderia pseudomallei
K96243]
gi|52427988|gb|AAU48581.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
gi|76580412|gb|ABA49887.1| Flagella basal body rod protein [Burkholderia pseudomallei 1710b]
gi|121227945|gb|ABM50463.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
gi|124292613|gb|ABN01882.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
gi|126227435|gb|ABN90975.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1106a]
gi|126242528|gb|ABO05621.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
gi|147747790|gb|EDK54866.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
gi|147752772|gb|EDK59838.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
gi|148028946|gb|EDK86878.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
gi|157805870|gb|EDO83040.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
406e]
gi|157935750|gb|EDO91420.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
Pasteur 52237]
gi|169653096|gb|EDS85789.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
gi|184212678|gb|EDU09721.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1655]
gi|217391964|gb|EEC31990.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
gi|225928144|gb|EEH24180.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
Pakistan 9]
gi|238522489|gb|EEP85933.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
gi|242138983|gb|EES25385.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1106b]
gi|243062738|gb|EES44924.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
gi|254218325|gb|EET07709.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
1710a]
Length = 413
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|22127327|ref|NP_670750.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
gi|45442796|ref|NP_994335.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
91001]
gi|108809055|ref|YP_652971.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
gi|108810748|ref|YP_646515.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
gi|145597817|ref|YP_001161893.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
gi|150260249|ref|ZP_01916977.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
gi|162421081|ref|YP_001604847.1| flagellar hook protein FlgE [Yersinia pestis Angola]
gi|165924960|ref|ZP_02220792.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939066|ref|ZP_02227618.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008888|ref|ZP_02229786.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211930|ref|ZP_02237965.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399572|ref|ZP_02305096.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419268|ref|ZP_02311021.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425161|ref|ZP_02316914.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167466340|ref|ZP_02331044.1| flagellar hook protein [Yersinia pestis FV-1]
gi|218927912|ref|YP_002345787.1| flagellar hook protein FlgE [Yersinia pestis CO92]
gi|229837408|ref|ZP_04457571.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
gi|229840621|ref|ZP_04460780.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842828|ref|ZP_04462980.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900945|ref|ZP_04516069.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
gi|270487673|ref|ZP_06204747.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
gi|294502788|ref|YP_003566850.1| flagellar hook protein [Yersinia pestis Z176003]
gi|21960408|gb|AAM87001.1|AE013948_9 putative flagellar hook protein [Yersinia pestis KIM 10]
gi|45437662|gb|AAS63212.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
91001]
gi|108774396|gb|ABG16915.1| flagellar hook protein [Yersinia pestis Nepal516]
gi|108780968|gb|ABG15026.1| putative flagellar hook protein [Yersinia pestis Antiqua]
gi|115346523|emb|CAL19399.1| putative flagellar hook protein [Yersinia pestis CO92]
gi|145209513|gb|ABP38920.1| flagellar hook protein [Yersinia pestis Pestoides F]
gi|149289657|gb|EDM39734.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
gi|162353896|gb|ABX87844.1| flagellar hook protein [Yersinia pestis Angola]
gi|165913022|gb|EDR31647.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923160|gb|EDR40311.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992227|gb|EDR44528.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206676|gb|EDR51156.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963262|gb|EDR59283.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167052076|gb|EDR63484.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055924|gb|EDR65705.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682284|gb|EEO78376.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
gi|229690095|gb|EEO82152.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696987|gb|EEO87034.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229705531|gb|EEO91541.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
gi|262360820|gb|ACY57541.1| flagellar hook protein [Yersinia pestis D106004]
gi|270336177|gb|EFA46954.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
gi|294353247|gb|ADE63588.1| flagellar hook protein [Yersinia pestis Z176003]
gi|320016711|gb|ADW00283.1| Flagellar hook protein flgE [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 413
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
F IA+ N +E+ +S NIAN++T ++A + F ++ Q+ +
Sbjct: 3 FSIANTALNAHTEQLNTISNNIANSATKGFKASR-TEFSSMYAQSQPLGVA 52
>gi|269836584|ref|YP_003318812.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
DSM 20745]
gi|269785847|gb|ACZ37990.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
DSM 20745]
Length = 154
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN------YRAKDISS----------- 43
++ F+ + L+ R +++ NIAN T YR + +
Sbjct: 1 MSIFETMRVSMSGLTAQRLRMDVIASNIANVDTTRTPEGGPYRRRQVVFTAVPATDSRPS 60
Query: 44 ---FETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA----PLDQTTGVQVSGNTVGI 96
F+ +L + + + + V E ++ ++ + +
Sbjct: 61 AGGFQRVLAPVDPQSNAGQGVAVTAIRTDPDAVRRVYEPDHPDADEEGFVLRPD---IDV 117
Query: 97 TNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
E+ YE N ++ + +M +
Sbjct: 118 ITEMTDLLAASRAYEANVTVLNAVKAMASRALT 150
>gi|323492336|ref|ZP_08097489.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
20546]
gi|323313383|gb|EGA66494.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
20546]
Length = 261
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+++SG E + + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETEASGQADELTAGEDGVGIIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|239828563|ref|YP_002951187.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
gi|239808856|gb|ACS25921.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
Length = 278
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRA 38
F A+ R ++ + NIANA+TP Y++
Sbjct: 5 FYTAASGMMAQQRRIEMWTNNIANANTPGYKS 36
>gi|89068731|ref|ZP_01156117.1| hypothetical protein OG2516_06821 [Oceanicola granulosus
HTCC2516]
gi|89045694|gb|EAR51756.1| hypothetical protein OG2516_06821 [Oceanicola granulosus
HTCC2516]
Length = 261
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM---ARTHET 60
+ IA+ ++S NIANA+T +++ ++F+ ++ QN +
Sbjct: 1 MKALGIATTGMLAQQTNVDVISNNIANANTTGFKSSR-AAFQDLIYQNVAREGALTAEDG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
++ + V L+ G+ +GN + +
Sbjct: 60 TVRPTGVDIGLGVQTVGTVRLNTQGGLIATGNDLDL 95
>gi|107023953|ref|YP_622280.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
gi|116691040|ref|YP_836663.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
gi|105894142|gb|ABF77307.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
gi|116649129|gb|ABK09770.1| flagellar basal body FlaE domain protein [Burkholderia
cenocepacia HI2424]
Length = 413
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFADMYANSVATSVNTQIGIGTTLNSVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|15964432|ref|NP_384785.1| flagellar hook protein FlgE [Sinorhizobium meliloti 1021]
gi|307311574|ref|ZP_07591215.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
gi|20141447|sp|Q9X5Y0|FLGE_RHIME RecName: Full=Flagellar hook protein flgE
gi|15073609|emb|CAC45251.1| Flagellar hook protein [Sinorhizobium meliloti 1021]
gi|306899591|gb|EFN30220.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
Length = 406
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 12 QHANWLSERQKIVSENIANASTPNYR 37
N S R V+ENIANA+T Y+
Sbjct: 12 SGMNAQSNRLSTVAENIANANTTGYK 37
>gi|126441055|ref|YP_001057322.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
gi|126220548|gb|ABN84054.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 668]
Length = 413
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|294828153|ref|NP_712848.2| flagellar basal body rod protein FlgG [Leptospira interrogans
serovar Lai str. 56601]
gi|293386000|gb|AAN49866.2| endoflagellar distal basal body rod protein [Leptospira
interrogans serovar Lai str. 56601]
Length = 264
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SGLHWNAHVIEAP 80
+S N+AN +T ++ K+ + FE ++ Q+ ++A T T + E + + H
Sbjct: 20 TISNNLANVNTTGFK-KNRADFEDLVYQHQVLAGTPATSVSEIPTGVNVGHGVRAAASQK 78
Query: 81 LDQTTGVQVSGNTVGI 96
L + Q +GN + +
Sbjct: 79 LFEIGSFQATGNKLDM 94
>gi|254175270|ref|ZP_04881931.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
gi|160696315|gb|EDP86285.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
Length = 413
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|75675293|ref|YP_317714.1| hypothetical protein Nwi_1100 [Nitrobacter winogradskyi Nb-255]
gi|74420163|gb|ABA04362.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
Nb-255]
Length = 622
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
M + IA IVS N+ANA+TP Y A+ +
Sbjct: 1 MSLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTL 41
>gi|317121026|ref|YP_004101029.1| flagellar hook-basal body protein [Thermaerobacter marianensis
DSM 12885]
gi|315591006|gb|ADU50302.1| flagellar hook-basal body protein [Thermaerobacter marianensis
DSM 12885]
Length = 289
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 20 RQ-KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
RQ + + N+AN +TP ++A + F ++ + + T +G
Sbjct: 18 RQVDVTANNLANVNTPGFKASR-ADFADLVYAALAVPASPATAAAGGVQAGHGVRLAATP 76
Query: 79 APLDQ 83
Q
Sbjct: 77 RSWRQ 81
>gi|302037602|ref|YP_003797924.1| flagellar basal-body rod protein FlgC [Candidatus Nitrospira
defluvii]
gi|300605666|emb|CBK41999.1| Flagellar basal-body rod protein FlgC [Candidatus Nitrospira
defluvii]
Length = 149
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 19/146 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANA-----STPN-YRAKDI------------S 42
M+ ++ + R +++ N+ANA ST YR +D+
Sbjct: 1 MELTDSLAVSVSALDAHRHRLNVIASNLANAQSTKTSTGGPYRRRDVVFQAAPVSPTFQK 60
Query: 43 SFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYK 102
+F+ + + A + + + P G N V + E+
Sbjct: 61 AFKQVTSGPGRQALDGVKVARVIEDKKPGQTVYDPRHPDADKKGFVTMPN-VNVMEEMVN 119
Query: 103 SGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N + I +M +
Sbjct: 120 MIGASRAYEANVQAINATRTMWNRAL 145
>gi|1870712|gb|AAB48836.1| FlgF [Sinorhizobium meliloti]
Length = 240
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
++SQ A L +R +++NIAN++T +RA ++ F +L
Sbjct: 9 LSSQMA--LEKRLNTLADNIANSNTVGFRATEVK-FNQVL 45
>gi|254785374|ref|YP_003072803.1| flagellar basal body rod protein FlgG [Teredinibacter turnerae
T7901]
gi|237683455|gb|ACR10719.1| flagellar basal-body rod protein FlgG [Teredinibacter turnerae
T7901]
Length = 261
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
E+ +SG + L Q + + V I E+ + YE+N+K++ + M
Sbjct: 194 ETAASGNPIQGIPGQNGLGQVEQGMLENSNVDIVEEMVNMITTQRAYEMNSKIVSTADQM 253
Query: 124 VMHVVR 129
+ V +
Sbjct: 254 LQFVTQ 259
>gi|51597637|ref|YP_071828.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP
32953]
gi|186896771|ref|YP_001873883.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
gi|51590919|emb|CAH22575.1| Putative FlgE-like flagellar hook protein [Yersinia
pseudotuberculosis IP 32953]
gi|186699797|gb|ACC90426.1| flagellar basal body FlaE domain protein [Yersinia
pseudotuberculosis PB1/+]
Length = 414
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
F IA+ N +E+ +S NIAN++T ++A + F ++ Q+ +
Sbjct: 3 FSIANTALNAHTEQLNTISNNIANSATKGFKASR-TEFSSMYAQSQPLGVA 52
>gi|170734374|ref|YP_001766321.1| flagellar hook protein FlgE [Burkholderia cenocepacia MC0-3]
gi|254246965|ref|ZP_04940286.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
gi|124871741|gb|EAY63457.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
gi|169817616|gb|ACA92199.1| flagellar basal body FlaE domain protein [Burkholderia
cenocepacia MC0-3]
Length = 413
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFADMYANSVATSVNTQIGIGTTLNSVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|134283656|ref|ZP_01770355.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
gi|134245065|gb|EBA45160.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
Length = 404
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 10 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 68
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 69 SSLNVAINGN 78
>gi|189426355|ref|YP_001953532.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
gi|189422614|gb|ACD97012.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
Length = 145
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKD--ISSFETILNQNF 52
M T +S R ++S N+AN +T Y+ KD ++ +
Sbjct: 1 MDLFTAMNTSSSALTAERTRMNLISSNLANVNTTRTPEGGPYKRKDAVFAATAPVDAFGK 60
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN--------TVGITNELYKSG 104
+ + H++E + + + D N V + E+
Sbjct: 61 ALGGAADRHVREVNVVEIVEDKSAPRMQYDPAH---PDANPQGYVALPNVNVVEEMADMI 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
+YE N + +M + +
Sbjct: 118 TATRVYEANVMSAQAAKNMALKTL 141
>gi|307318906|ref|ZP_07598337.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
AK83]
gi|306895320|gb|EFN26075.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
AK83]
Length = 241
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
++SQ A L +R +++NIAN++T +RA ++ F +L
Sbjct: 9 LSSQMA--LEKRLNTLADNIANSNTVGFRATEVK-FNQVL 45
>gi|258622490|ref|ZP_05717512.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
VM573]
gi|258625232|ref|ZP_05720144.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
VM603]
gi|258582479|gb|EEW07316.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
VM603]
gi|258585190|gb|EEW09917.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
VM573]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+D+SGL + + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETDASGLAEELVAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|167579488|ref|ZP_02372362.1| flagellar hook protein FlgE [Burkholderia thailandensis TXDOH]
Length = 413
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|116331368|ref|YP_801086.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116125057|gb|ABJ76328.1| Endoflagellar distal basal body rod protein [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 264
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SGLHWNAHVIEAP 80
+S N+AN +T ++ K+ + FE ++ Q+ ++A T T + E + + H
Sbjct: 20 TISNNLANVNTTGFK-KNRADFEDLVYQHQVLAGTPATSVSEIPTGVNVGHGVRAAASQK 78
Query: 81 LDQTTGVQVSGNTVGI 96
L + Q +GN + +
Sbjct: 79 LFEIGSFQATGNKLDM 94
>gi|83594175|ref|YP_427927.1| flagellar basal body rod protein FlgG [Rhodospirillum rubrum ATCC
11170]
gi|83577089|gb|ABC23640.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
+++S NIAN +T Y + + F +L QN A ++ + +G+ V A +
Sbjct: 19 EVISNNIANMNTTAYTRRR-AEFHDLLYQNLRRAGSNSSDTGTIVPTGVQLGLGVKTAAV 77
Query: 82 DQTTG 86
+ T
Sbjct: 78 YRITE 82
>gi|217076897|ref|YP_002334613.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
TCF52B]
gi|217036750|gb|ACJ75272.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
TCF52B]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 23/64 (35%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
E+ +SG + V + V I E+ YELN++ I+ + M
Sbjct: 193 ETPASGTPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISAMRAYELNSRTIQTADEM 252
Query: 124 VMHV 127
+
Sbjct: 253 LRTA 256
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 16 WLSE-RQKIVSENIANASTPNYRAKDISSFETILNQ--NFLMARTHETHLKESDSSGLHW 72
W + + +S NIAN T Y+ K S F+ +L A T + L + H
Sbjct: 13 WAQQFKLDTLSNNIANVDTAGYK-KVKSEFQDLLYDYSKNAGAATAQNSLHPTGLYVGHG 71
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGI 96
+ ++ +GN++ +
Sbjct: 72 TKLSATTRIFTQGNLERTGNSLDL 95
>gi|319781687|ref|YP_004141163.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317167575|gb|ADV11113.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 240
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
L R +++N+ANAST +RA + FE +++ + + + ++ SG H
Sbjct: 15 LERRLDTIADNVANASTIGFRATGVK-FEDVVSGTGQKSVSFAS-PGKTYLSGAHGALSE 72
Query: 77 IEAPLD 82
P D
Sbjct: 73 TGNPFD 78
>gi|331666548|ref|ZP_08367422.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
gi|331065772|gb|EGI37656.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 238 RAYEMNAKMVSAADDMLQYISQ 259
>gi|300817268|ref|ZP_07097486.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
gi|300530244|gb|EFK51306.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 238 RAYEMNAKMVSAADDMLQYISQ 259
>gi|222147571|ref|YP_002548528.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
gi|221734559|gb|ACM35522.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
Length = 263
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IAS N +++S NIAN +T ++ K + F +L Q +
Sbjct: 1 MRALAIASTGMNAQQTNLEVISNNIANINTTGFK-KSRAEFSDLLYQTEKAVGVANRANQ 59
Query: 64 ESDSSGLHWNAHVIEAPLD 82
+ G + V A +
Sbjct: 60 STVPEGANIGLGVQTAAVR 78
>gi|241113584|ref|YP_002973419.1| protein of unknown function DUF1078 domain protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861792|gb|ACS59458.1| protein of unknown function DUF1078 domain protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 430
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A + + R VS+NIANA+T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAISQQGDISYTTSAYDLAISGDG 89
>gi|195952550|ref|YP_002120840.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
Y04AAS1]
gi|195932162|gb|ACG56862.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
Y04AAS1]
Length = 136
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 5/119 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAS---TPNYRAKDISS-FETILNQNFLMAR 56
+ F +++ R ++ N+AN T + + F+ + ++N L
Sbjct: 2 LDIFNAFDVSASGMYAERIRMNTIASNLANYESYKTDGTPYQKLEPVFQAVYDRNMLSDG 61
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
++ E S + P T G N + +T E+ Y+ N
Sbjct: 62 LVPVNVSEIRQSNGFKLIYDPSNPHANTQGYVEEPN-INVTTEMVDMITATQSYQANLS 119
>gi|153831580|ref|ZP_01984247.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
gi|156976143|ref|YP_001447049.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116]
gi|269960118|ref|ZP_06174494.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
1DA3]
gi|148872090|gb|EDL70907.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
gi|156527737|gb|ABU72822.1| hypothetical protein VIBHAR_04914 [Vibrio harveyi ATCC BAA-1116]
gi|269835089|gb|EEZ89172.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
1DA3]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+++SG E + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETEASGPADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|83589649|ref|YP_429658.1| hypothetical protein Moth_0797 [Moorella thermoacetica ATCC
39073]
gi|83572563|gb|ABC19115.1| conserved hypothetical protein [Moorella thermoacetica ATCC
39073]
Length = 253
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTHE 59
+AS RQ ++S N+ANA+T +++ + SF +L Q +
Sbjct: 7 LASTGMLVQEMRQDVISNNLANATTGGFKSAVATVRSFPEMLLQRLEKNQAIP 59
>gi|15022422|dbj|BAB62243.1| flagellar protein [Treponema medium]
Length = 280
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
+ F S N R ++ NIAN +T ++ + +F+ +++Q A
Sbjct: 4 SLFSGVSGMQNH-QTRMDVIGNNIANVNTTGFK-RGRVNFQDLISQQLSGA 52
>gi|254477684|ref|ZP_05091070.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
gi|214031927|gb|EEB72762.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
Length = 261
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ +IA+ R + +S N+AN +T Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARR-AEFADLHYQQVTRAGTVNASDG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
T L GL A I L Q Q GN + +
Sbjct: 60 TVLPTGVQVGLGVRASAISIHLAQGALTQT-GNDLDV 95
>gi|220934396|ref|YP_002513295.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995706|gb|ACL72308.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
HL-EbGR7]
Length = 263
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + R ++S N+AN +T ++ K + F+ ++ Q A S
Sbjct: 7 IAKTGLDAQQTRMSVISNNLANVNTTGFK-KGRAVFQDLIYQTVRQAGAQAAQ-DTELPS 64
Query: 69 GLHWNAHVIEAPLD---QTTGVQVSGNTVGITNE 99
GL V + V + N + + E
Sbjct: 65 GLMLGTGVRTVATEKMFTQGNVTQTENALDMAIE 98
>gi|118444436|ref|YP_877973.1| flagellar basal body rod protein FlgC [Clostridium novyi NT]
gi|118134892|gb|ABK61936.1| flagellar basal-body rod protein FlgC [Clostridium novyi NT]
Length = 145
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 15/142 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA-------KDISSFETILNQNFL 53
M + +I++ R +S NI N T + + I+ F+ L +
Sbjct: 1 MNAFSSMRISASGLAAERLRMDTISSNITNFKTTRGKDGQRQPYIRKIAVFKENLKKELN 60
Query: 54 M-ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHI 106
+ +E+ L + G+ + + + N V I NE+
Sbjct: 61 KSGKGYESRLNGVKAVGIVEDKSPLRRVYNPNH-PDADENGYVLMPNVNILNEMADMIAA 119
Query: 107 KYLYELNTKLIKKLNSMVMHVV 128
YE N I +M M +
Sbjct: 120 TRAYEANVTAINSSKNMFMKAL 141
>gi|260866415|ref|YP_003232817.1| putative lateral flagellar component of cell-distal portion of
basal-body rod [Escherichia coli O111:H- str. 11128]
gi|257762771|dbj|BAI34266.1| predicted lateral flagellar component of cell-distal portion of
basal-body rod [Escherichia coli O111:H- str. 11128]
gi|323178492|gb|EFZ64070.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
Length = 261
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 238 RAYEMNAKMVSAADDMLQYISQ 259
>gi|146341904|ref|YP_001206952.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. ORS278]
gi|146194710|emb|CAL78735.1| Flagellar basal-body rod protein flgG (Distal rod protein)
[Bradyrhizobium sp. ORS278]
Length = 262
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ SSG + + L T + V + +E+ + + YE+N K+I +
Sbjct: 192 FTDTPSSGAPQDGIANQDGLGSITQGSLEQANVDVVSEMSELIAAQRAYEMNAKVISAAD 251
Query: 122 SMVMHVV 128
M+
Sbjct: 252 QMMQSTT 258
>gi|88811802|ref|ZP_01127056.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
gi|88791193|gb|EAR22306.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
Length = 246
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
IA A + Q++ + N+ANA+TP +RA
Sbjct: 7 IAMTGAKHALKAQQVNNHNLANANTPGFRA 36
>gi|222100886|ref|YP_002535454.1| hypothetical protein CTN_1912 [Thermotoga neapolitana DSM 4359]
gi|221573276|gb|ACM24088.1| Putative uncharacterized protein [Thermotoga neapolitana DSM
4359]
Length = 759
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+V NI+N +T ++A + +FET+L Q R + + ++ + + V
Sbjct: 20 MDVVGNNISNVNTVGFKASRV-NFETMLAQTIKAGRAPQESVGGTNPMQIGLGSQVA 75
>gi|197104256|ref|YP_002129633.1| flagellar hook-associated protein [Phenylobacterium zucineum
HLK1]
gi|196477676|gb|ACG77204.1| flagellar hook-associated protein [Phenylobacterium zucineum
HLK1]
Length = 700
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
Q A+ N + VS+NIAN +TP Y K + +++ + R
Sbjct: 7 LQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQG 59
>gi|126697802|ref|YP_001086699.1| putative flagellar hook-associated protein [Clostridium difficile
630]
gi|115249239|emb|CAJ67052.1| Flagellar hook-associated protein FlgK (or HAP1) [Clostridium
difficile]
Length = 436
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + VSG V + E+ + ++ Y+ + K++ ++ V+ G
Sbjct: 389 DNSRMSVSG--VSLDEEMTELMKVQRSYQASAKVMSTAVQLLDVVING 434
>gi|15964409|ref|NP_384762.1| flagellar basal body rod protein FlgF [Sinorhizobium meliloti
1021]
gi|307311551|ref|ZP_07591192.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
BL225C]
gi|17380373|sp|O54248|FLGF_RHIME RecName: Full=Flagellar basal-body rod protein flgF
gi|15073586|emb|CAC45228.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
gi|306899568|gb|EFN30197.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
BL225C]
Length = 241
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
++SQ A L +R +++NIAN++T +RA ++ F +L
Sbjct: 9 LSSQMA--LEKRLNTLADNIANSNTVGFRATEVK-FNQVL 45
>gi|225871925|ref|YP_002753379.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
ATCC 51196]
gi|225793067|gb|ACO33157.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
ATCC 51196]
Length = 165
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 42/165 (25%), Gaps = 42/165 (25%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS---------SFE 45
M + ++ R ++V+ N+ANA+T Y K++ +F
Sbjct: 1 MNLLGLLDVSGSALEAERIRAEVVAANMANANTTRTASGGPYLRKEVVFSSQAPEPGAFA 60
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNT------------ 93
F L+ + + V N
Sbjct: 61 NQFADQFAGGAEAPVSLQAMAGGMAEPQVGGVRV-----SAVLTDKNAILKRYDPSHPDA 115
Query: 94 -----VGITN-----ELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
V E+ Y LN+ ++ +M+ +
Sbjct: 116 DKQGYVSYPEINPVTEMVDLMSATRSYGLNSSAVQATKNMINSAL 160
>gi|332284021|ref|YP_004415932.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
gi|330427974|gb|AEC19308.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
Length = 261
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA ++S N+AN +T ++ + ++FE ++ Q + S
Sbjct: 7 IAKTGLESQQTNMDVISNNLANVNTTGFK-RSRANFEDLMYQTIRQPGAQVGAANQLPSG 65
Query: 69 GLHWNAHVIEAPLDQTTGVQV--SGNTVGITNE 99
A T + +GN++ I +
Sbjct: 66 LQIGTGVRTVATERIHTQGNLKDTGNSMDIAIQ 98
>gi|262173356|ref|ZP_06041033.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
gi|261890714|gb|EEY36701.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
Length = 250
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+D+SGL + + G+ V + E+ + YE+N K++ +
Sbjct: 181 FRETDASGLAEELVAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATD 240
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 241 DMLKFVAQ 248
>gi|170703096|ref|ZP_02893916.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
IOP40-10]
gi|170131993|gb|EDT00501.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
IOP40-10]
Length = 413
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTGLASVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|168705106|ref|ZP_02737383.1| flagellar basal-body rod protein FlgG [Gemmata obscuriglobus UQM
2246]
Length = 261
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+ S NIAN+ TP Y+ I+ F+ L + T + + + V
Sbjct: 22 VTSNNIANSDTPGYKTGQIT-FQDQLYRAADPVGAPTTGVTPPSGTQIGSGVVV 74
>gi|85859196|ref|YP_461398.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
gi|85722287|gb|ABC77230.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
Length = 260
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK--DISSFETILNQNFLMARTHETHLKESD 66
A+ Q +V+ N+AN +T ++ D L+ + L
Sbjct: 7 TAATGMQAQQVEQDVVANNLANVNTVGFKKSRADFQDLMYQLSTKAGSETSSGNQLTVGI 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNT 93
G+ + Q Q +GN+
Sbjct: 67 EIGMGVKPVATQKIFSQ-GDYQQTGNS 92
>gi|52082162|ref|YP_080953.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
14580]
gi|52787554|ref|YP_093383.1| FlhO [Bacillus licheniformis ATCC 14580]
gi|319648039|ref|ZP_08002256.1| FlhO protein [Bacillus sp. BT1B_CT2]
gi|52005373|gb|AAU25315.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
14580]
gi|52350056|gb|AAU42690.1| FlhO [Bacillus licheniformis ATCC 14580]
gi|317389674|gb|EFV70484.1| FlhO protein [Bacillus sp. BT1B_CT2]
Length = 279
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYR 37
A+ R ++++ NIANA+TP Y+
Sbjct: 7 TATSAMITQQRRTEMLTNNIANANTPGYK 35
>gi|45657204|ref|YP_001290.1| flagellar basal body rod protein FlgG [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|45600442|gb|AAS69927.1| FlgG [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 265
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SGLHWNAHVIEAP 80
+S N+AN +T ++ K+ + FE ++ Q+ ++A T T + E + + H
Sbjct: 21 TISNNLANVNTTGFK-KNRADFEDLVYQHQVLAGTPATSVSEIPTGVNVGHGVRAAASQK 79
Query: 81 LDQTTGVQVSGNTVGI 96
L + Q +GN + +
Sbjct: 80 LFEIGSFQATGNKLDM 95
>gi|167835111|ref|ZP_02461994.1| flagellar hook protein FlgE [Burkholderia thailandensis MSMB43]
Length = 413
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T ++ + F + + A + + +S +
Sbjct: 19 VIGNNIANANTVGFKGST-AQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSST 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLNVAINGN 87
>gi|116327820|ref|YP_797540.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116120564|gb|ABJ78607.1| Endoflagellar distal basal body rod protein [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
Length = 265
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SGLHWNAHVIEAP 80
+S N+AN +T ++ K+ + FE ++ Q+ ++A T T + E + + H
Sbjct: 21 TISNNLANVNTTGFK-KNRADFEDLVYQHQVLAGTPATSVSEIPTGVNVGHGVRAAASQK 79
Query: 81 LDQTTGVQVSGNTVGI 96
L + Q +GN + +
Sbjct: 80 LFEIGSFQATGNKLDM 95
>gi|91204384|emb|CAJ70884.1| strongly similar to flagellar hook protein [Candidatus Kuenenia
stuttgartiensis]
Length = 250
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS 67
Q +++ N+AN +T Y+ K+I+ FE+ + A+ S
Sbjct: 27 QAVIARNLANVNTVGYK-KNIAVFESFVAGAKNQAKEASEGTGSSLG 72
>gi|148256792|ref|YP_001241377.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. BTAi1]
gi|146408965|gb|ABQ37471.1| Flagellar basal-body rod protein flgG (Distal rod protein)
[Bradyrhizobium sp. BTAi1]
Length = 262
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
++ SSG + + L T + V + +E+ + + YE+N K+I +
Sbjct: 192 FTDTPSSGAPQDGVANQDGLGSITQGSLEQANVDVVSEMSELIAAQRAYEMNAKVISAAD 251
Query: 122 SMVMHVV 128
M+
Sbjct: 252 QMMQSTT 258
>gi|226225741|ref|YP_002759847.1| hypothetical protein GAU_0335 [Gemmatimonas aurantiaca T-27]
gi|226088932|dbj|BAH37377.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 119
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 42 SSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELY 101
S + L+++ +R + ++ + A + Q T N V + +E+
Sbjct: 33 SPLKAALDKSVDRSRGIADRVAKATVNNGDGFALEAKTGNAQATV-----NPVNVEDEMV 87
Query: 102 KSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + ++L++K + ++G
Sbjct: 88 ALADEQLRFLATSRLLEKTYQSLRTAIKG 116
>gi|168182721|ref|ZP_02617385.1| flagellar basal body rod protein [Clostridium botulinum Bf]
gi|237796077|ref|YP_002863629.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
str. 657]
gi|182674133|gb|EDT86094.1| flagellar basal body rod protein [Clostridium botulinum Bf]
gi|229261217|gb|ACQ52250.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
657]
Length = 263
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S N+AN +T Y+ +D+ SF+ ++ + + T + +G A Q
Sbjct: 22 ISNNLANVNTVGYKREDV-SFQELVQETLKRKG-YPTSDRPEIQTGTGVKATNWIRDTHQ 79
Query: 84 TTGVQVSGNTVGI--TNE---LYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN + + Y YE + + N M+
Sbjct: 80 QGILLNTGNKTDLAIDGQGFFRVIMSDGNYAYERSGNFVIDRNGML 125
>gi|157376214|ref|YP_001474814.1| flagellar basal body rod protein FlgG [Shewanella sediminis
HAW-EB3]
gi|157318588|gb|ABV37686.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
HAW-EB3]
Length = 262
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKESDSSGLHWNAHVIE 78
++S N+ANAST Y+ K + FE +L Q A T L + G +
Sbjct: 20 SVISNNVANASTVGYK-KSRAVFEDLLYQTVNQAGGVSASNTKLPNGLNIGAGTKVVATQ 78
Query: 79 APLDQTTGVQVSGNTVGITNE 99
Q + N++ + E
Sbjct: 79 KVFTQGNMLTTD-NSMDLMVE 98
>gi|172061972|ref|YP_001809624.1| flagellar hook protein FlgE [Burkholderia ambifaria MC40-6]
gi|171994489|gb|ACB65408.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
MC40-6]
Length = 413
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + +S +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFSDMYANSIATSVNTQIGIGTGLASVQQQFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|293414371|ref|ZP_06657020.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
gi|291434429|gb|EFF07402.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
Length = 260
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISLLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|302382561|ref|YP_003818384.1| flagellar hook-associated protein FlgK [Brevundimonas
subvibrioides ATCC 15264]
gi|302193189|gb|ADL00761.1| flagellar hook-associated protein FlgK [Brevundimonas
subvibrioides ATCC 15264]
Length = 707
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAK 39
M + IA+ ++ ++VS+N++N +TP Y K
Sbjct: 1 MSLNSILNIANSGLQAAQQQLRVVSDNVSNVNTPGYVRK 39
>gi|116248740|ref|YP_764581.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
3841]
gi|115253390|emb|CAK11778.1| putative flagellar hook protein flgE [Rhizobium leguminosarum bv.
viciae 3841]
Length = 430
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A + + R VS+NIANA+T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAISQQGDISYTTSAYDLAISGDG 89
>gi|15616299|ref|NP_244604.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
gi|10176361|dbj|BAB07456.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
Length = 280
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--------LMARTHETH 61
AS L ++ +S NIAN++T Y+ ++ +SF +L Q R
Sbjct: 8 ASVTMGELQKKLDTLSHNIANSNTTGYKRRE-ASFSDLLFQQVNTNKATQYETGRLTPNG 66
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ + + A +E TT +
Sbjct: 67 IRVGSGAKVSQTALRMEQGTLTTTDRALD 95
>gi|254511786|ref|ZP_05123853.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
bacterium KLH11]
gi|221535497|gb|EEE38485.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
bacterium KLH11]
Length = 483
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M T A N S +VS NIANA TP Y + + + ++ N +
Sbjct: 1 MNMSTALNNALGGLNAASRGAAVVSGNIANALTPGYARRTLELTTSPISGNGVRVVGITR 60
Query: 61 H 61
H
Sbjct: 61 H 61
>gi|94495410|ref|ZP_01301990.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
gi|94424798|gb|EAT09819.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
Length = 247
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRA 38
A RQ ++ N+ANA+T +RA
Sbjct: 4 LVNTALTAMRGAMARQASIANNLANANTVGFRA 36
>gi|295707199|ref|YP_003600274.1| flagellar hook-basal body complex protein FlhO [Bacillus
megaterium DSM 319]
gi|294804858|gb|ADF41924.1| flagellar hook-basal body complex protein FlhO [Bacillus
megaterium DSM 319]
Length = 274
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 7 FQIASQHANWLSERQ-KIVSENIANASTPNYRAK--DISSFETILNQNFL 53
F A+ +RQ +++ NIANA+TP ++A + +F +L Q
Sbjct: 5 FYTAAAGM-LSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRME 53
>gi|294339843|emb|CAZ88206.1| putative Flagellar basal body FlaE (FlgE) [Thiomonas sp. 3As]
Length = 415
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
++ FQ A S +++ NIANA+T +++ + + F A T + +
Sbjct: 1 MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSN-AQFADTYAAAI--AGTSPQYGQ 57
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + A ++T +
Sbjct: 58 VGIGTSVATVAQQFSQGNIESTSNPLD 84
>gi|78776565|ref|YP_392880.1| flagellar basal body rod protein FlgC [Sulfurimonas denitrificans
DSM 1251]
gi|78497105|gb|ABB43645.1| Flagellar basal-body rod protein FlgC [Sulfurimonas denitrificans
DSM 1251]
Length = 164
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 31/156 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
+ F I+ + R +S+NIANA T YR K++ F N+
Sbjct: 5 LNSFDISGYGLSAQRVRVNTISQNIANAQTTRTDEGGPYRRKEVVFKAIDFNQEFNKALN 64
Query: 54 MARTHETHLKESDSS--GLHWNAHVIEAPLD-------------QTTGVQVSGN------ 92
+ D G N ++ +D N
Sbjct: 65 GMTESAKYEDPLDEGDFGKRVNPAIMSVVVDKISRDDKEPQKKYDPAHPDADANGYVAYP 124
Query: 93 TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ E+ Y+ N + S+ +
Sbjct: 125 NINPVIEMADLVEATRSYQANVAAFESSKSIANSAI 160
>gi|46906948|ref|YP_013337.1| flagellar hook protein FlgE [Listeria monocytogenes serotype 4b
str. F2365]
gi|47091659|ref|ZP_00229455.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
str. 4b H7858]
gi|217965205|ref|YP_002350883.1| flagellar hook protein [Listeria monocytogenes HCC23]
gi|226223328|ref|YP_002757435.1| flagellar hook protein FlgE [Listeria monocytogenes Clip81459]
gi|254824023|ref|ZP_05229024.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
gi|254853099|ref|ZP_05242447.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
gi|254932023|ref|ZP_05265382.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
gi|300764509|ref|ZP_07074502.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
gi|46880214|gb|AAT03514.1| putative flagellar hook protein FlgE [Listeria monocytogenes
serotype 4b str. F2365]
gi|47019978|gb|EAL10715.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
str. 4b H7858]
gi|217334475|gb|ACK40269.1| flagellar hook protein [Listeria monocytogenes HCC23]
gi|225875790|emb|CAS04493.1| Putative flagellar hook protein FlgE [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606448|gb|EEW19056.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
gi|293583575|gb|EFF95607.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
gi|293593251|gb|EFG01012.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
gi|300514863|gb|EFK41917.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
gi|307570236|emb|CAR83415.1| flagellar hook protein [Listeria monocytogenes L99]
gi|332311122|gb|EGJ24217.1| Flagellar hook protein FlgE [Listeria monocytogenes str. Scott A]
Length = 411
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTG 86
+ + D T G
Sbjct: 65 SFGSGSKIGAILTDYTAG 82
>gi|147678415|ref|YP_001212630.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
gi|146274512|dbj|BAF60261.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
Length = 269
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Query: 11 SQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
+ R ++ NIAN +T ++ ++F+ +L Q + + S +
Sbjct: 9 ASGLRSHQTRMDVIGNNIANVNTIGFKGSR-ANFQDVLYQTIRFGSAGSDNTGGVNKSQV 67
Query: 71 HWNAHVIEAPLDQTTGVQVS 90
V + G S
Sbjct: 68 GLGVTVASITNNTGPGGMQS 87
>gi|254503570|ref|ZP_05115721.1| conserved domain protein [Labrenzia alexandrii DFL-11]
gi|222439641|gb|EEE46320.1| conserved domain protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
LS R + VS N+AN +T YRA D +F ++++
Sbjct: 15 LSNRLETVSRNVANMNTAGYRA-DEINFAEMVSKAG 49
>gi|209547946|ref|YP_002279863.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533702|gb|ACI53637.1| protein of unknown function DUF1078 domain protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 433
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R V++NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQSSVRQAVSDQGDISYTTSGTDLAISGDG 89
>gi|170680582|ref|YP_001742375.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
gi|256020230|ref|ZP_05434095.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
gi|260853468|ref|YP_003227359.1| putative lateral flagellar component of cell-distal portion of
basal-body rod [Escherichia coli O26:H11 str. 11368]
gi|293403357|ref|ZP_06647448.1| flgG [Escherichia coli FVEC1412]
gi|293408369|ref|ZP_06652208.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
gi|298378968|ref|ZP_06988849.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
gi|300900357|ref|ZP_07118533.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
gi|300936128|ref|ZP_07151067.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
gi|306813301|ref|ZP_07447494.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
gi|307313517|ref|ZP_07593138.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
gi|331645420|ref|ZP_08346524.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
gi|332281392|ref|ZP_08393805.1| lateral flagellar rod protein [Shigella sp. D9]
gi|59889782|emb|CAH19138.1| Lateral flagellar rod protein (FlgG-like) [Escherichia coli]
gi|170518300|gb|ACB16478.1| lateral flagellar rod protein LfgG [Escherichia coli SMS-3-5]
gi|257752117|dbj|BAI23619.1| predicted lateral flagellar component of cell-distal portion of
basal-body rod [Escherichia coli O26:H11 str. 11368]
gi|284920046|emb|CBG33103.1| lateral flagellar rod protein (FlgG-like) [Escherichia coli 042]
gi|291429210|gb|EFF02230.1| flgG [Escherichia coli FVEC1412]
gi|291471547|gb|EFF14030.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
gi|298280081|gb|EFI21585.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
gi|300356125|gb|EFJ71995.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
gi|300458706|gb|EFK22199.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
gi|305854064|gb|EFM54503.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
gi|306906685|gb|EFN37196.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
gi|315059544|gb|ADT73871.1| flagellar component of cell-distal portion of basal-body rod
[Escherichia coli W]
gi|323158101|gb|EFZ44200.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
gi|323171066|gb|EFZ56715.1| flagellar basal-body rod protein FlgG [Escherichia coli LT-68]
gi|323191540|gb|EFZ76801.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
gi|323379897|gb|ADX52165.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
gi|323975928|gb|EGB71022.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
gi|327254556|gb|EGE66172.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
gi|331045582|gb|EGI17708.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
gi|332103744|gb|EGJ07090.1| lateral flagellar rod protein [Shigella sp. D9]
Length = 261
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 238 RAYEMNAKMVSAADDMLQYISQ 259
>gi|15616948|ref|NP_240161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
gi|219681701|ref|YP_002468087.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|219682256|ref|YP_002468640.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|257471397|ref|ZP_05635396.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|11386809|sp|P57424|FLGG_BUCAI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|25298916|pir||G84969 flagellar basal-body rod protein flgG [imported] - Buchnera sp.
(strain APS)
gi|10039013|dbj|BAB13047.1| flagellar basal-body rod protein flgG [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
gi|219621989|gb|ACL30145.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219624544|gb|ACL30699.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|311086079|gb|ADP66161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086651|gb|ADP66732.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087237|gb|ADP67317.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087756|gb|ADP67835.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 260
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I I+ + I+S N+AN ST ++ + + FE ++ Q A T+ + L+
Sbjct: 2 IPSLWISKTGLDAQQINMNIISNNLANVSTNGFK-RSRAVFEDLMYQTIREAGTNSS-LE 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQLGTGVRPVSTER 79
>gi|188580157|ref|YP_001923602.1| hypothetical protein Mpop_0889 [Methylobacterium populi BJ001]
gi|179343655|gb|ACB79067.1| protein of unknown function DUF1078 domain protein
[Methylobacterium populi BJ001]
Length = 460
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + Q A S +S NIAN+ T Y+ D +SF +L ++T +
Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRID-TSFVDMLVDGDARSQTAGS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ S L + + +T + + G
Sbjct: 60 ---VAAFSELTNSVQGNKVSTGVSTNMALDG 87
>gi|83312594|ref|YP_422858.1| flagellar basal body rod protein FlgG [Magnetospirillum
magneticum AMB-1]
gi|82947435|dbj|BAE52299.1| Flagellar basal body rod protein [Magnetospirillum magneticum
AMB-1]
Length = 261
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S NIAN +T + + F +L QN + +
Sbjct: 1 MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRR-PEFADLLYQNLRRVGSQSSDTG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG---VQVSGNTVGITNE 99
+G+ V + + T VQ + NT+ + +
Sbjct: 60 TIVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDMAIQ 98
>gi|310659037|ref|YP_003936758.1| flagellar hook protein [Clostridium sticklandii DSM 519]
gi|308825815|emb|CBH21853.1| flagellar hook protein [Clostridium sticklandii]
Length = 418
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A R ++ NIAN +T Y++ ++ F+ L+Q A + ++
Sbjct: 8 AVSALRNHQLRMDVIGNNIANVNTIGYKSSRVT-FKDSLSQMLRGASGPDASRGGTNPQQ 66
Query: 70 LHWNAHVIEAPLDQTTGV 87
+ + TTGV
Sbjct: 67 VGLGMDLSSIDTLFTTGV 84
>gi|268680292|ref|YP_003304723.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
DSM 6946]
gi|268618323|gb|ACZ12688.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
DSM 6946]
Length = 163
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 37/162 (22%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS------------ 42
M ++ F I+S + R ++S NIANA+T Y+ KD+
Sbjct: 1 MAYLSSFDISSYGLSAQRFRMDLISSNIANANTTRTSEGGPYQRKDVVFKAVDFSKTLNE 60
Query: 43 ---------SFETILNQNFLMARTHETHLKES------DSSGLHWNAHVIEAPLDQTTGV 87
+E L+ FL + + D S + ++ V
Sbjct: 61 KIAENNNMLEYENPLDDAFLQENANPAIMSVVVDKVVRDESEFTYKYEPSHPDANEEGYV 120
Query: 88 Q-VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ N V E+ Y+ N + ++ +
Sbjct: 121 AYPNINPVI---EMANLIEATRAYQANVSAFQSAKAIAQSAI 159
>gi|255521910|ref|ZP_05389147.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-175]
Length = 411
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTG 86
+ + D T G
Sbjct: 65 SFGSGSKIGAILTDYTAG 82
>gi|290893994|ref|ZP_06556969.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
gi|290556440|gb|EFD89979.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
Length = 411
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN M ++
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQN-TMGSVAGGLYAGTNPM 64
Query: 69 GLHWNAHVIEAPLDQTTG 86
+ + D T G
Sbjct: 65 SFGSGSKIGAILTDYTAG 82
>gi|188587423|ref|YP_001918968.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352110|gb|ACB86380.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 265
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 24/66 (36%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+ +SG E Q + G+ V I E+ + YE N+K I+ +
Sbjct: 195 YSATAASGDASVGLPGENGRGQLQQGFLEGSNVNIAEEMVNMITAQRAYETNSKSIQSTD 254
Query: 122 SMVMHV 127
M+
Sbjct: 255 EMMSIA 260
>gi|310644366|ref|YP_003949125.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
gi|309249317|gb|ADO58884.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
Length = 275
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+R ++++NIAN +T Y++K SFE +L T
Sbjct: 16 QQRLDLIADNIANVNTVGYKSKQ-GSFEDVLANVQQQPST 54
>gi|301645415|ref|ZP_07245356.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
gi|301076299|gb|EFK91105.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
Length = 261
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEADNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 238 RAYEMNAKMVSAADDMLQYISQ 259
>gi|148252489|ref|YP_001237074.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
sp. BTAi1]
gi|146404662|gb|ABQ33168.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
sp. BTAi1]
Length = 125
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 16/126 (12%)
Query: 14 ANWLSERQKIVSENIANAST-----------PNYRAKDISSFETILNQNFLMARTHETHL 62
N + R ++ + N+ANA + P K E ++ + T T
Sbjct: 1 MNAATRRLEVSASNVANARSTGALPDANGKLPAGAPKAYDPLE-LVQSDVAGGGTQTTIT 59
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNS 122
+ S + + A D V + E+ KY + N +++K +
Sbjct: 60 RASQGTSASYEPSAPFANKDGLVAAP----NVDLAQEMISQLVAKYSFAANARVLKASDE 115
Query: 123 MVMHVV 128
M VV
Sbjct: 116 MSRIVV 121
>gi|237751360|ref|ZP_04581840.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
gi|229372726|gb|EEO23117.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
Length = 600
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNF 52
+S NIAN +T Y+A D F+T+ +++
Sbjct: 22 ISNNIANVNTVGYKAND-PEFKTLFSRSM 49
>gi|213026534|ref|ZP_03340981.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 108
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 14/111 (12%)
Query: 27 NIANAST---PN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA- 79
N+ANA + P+ YRAK + + + + S V E
Sbjct: 1 NLANADSVTGPDGQPYRAKQV-----VFQVDAAPGQATGGVKVASVIESQAPEKLVYEPG 55
Query: 80 -PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
PL G N V + E+ + Y+ N +++ + SM++ +
Sbjct: 56 NPLADANGYVKMPN-VDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLT 105
>gi|226315011|ref|YP_002774907.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC
100599]
gi|226097961|dbj|BAH46403.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC
100599]
Length = 329
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 17 LSERQKIVSENIANASTPNYRAKDI 41
L RQ+ ++ N+AN +TP ++ +D+
Sbjct: 15 LQNRQESLANNLANINTPGFK-QDV 38
>gi|50954402|ref|YP_061690.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950884|gb|AAT88585.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 132
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/126 (11%), Positives = 36/126 (28%), Gaps = 2/126 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA N + + +N+AN RA +F+ + + +
Sbjct: 5 LDAIGIAGTGMNLNQKWLDAIGDNLANIDDTTNRAN--PAFQERFVLAQADSDSGGVAVA 62
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ + V G + ++ ++ + Y+ N + M
Sbjct: 63 GTPFGSAAGRLVYSLRDPNADAQGYVRGTGIDLSVQMTNLIMAQRAYQANANTVSSARYM 122
Query: 124 VMHVVR 129
++
Sbjct: 123 YQSALQ 128
>gi|42522133|ref|NP_967513.1| flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
gi|39574664|emb|CAE78506.1| Flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
Length = 271
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
S + ++ N+AN +TP ++ +D F+ L N M T +
Sbjct: 17 STKLDTIANNLANVNTPAFK-RDQQLFQEYLTANEKMPETTQ 57
>gi|296135673|ref|YP_003642915.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
gi|295795795|gb|ADG30585.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
Length = 414
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
++ FQ A S +++ NIANA+T +++ + + F A T + +
Sbjct: 1 MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSN-AQFADSYAAAI--AGTSPQYGQ 57
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + A ++T +
Sbjct: 58 VGIGTSVATVAQQFSQGNIESTSNPLD 84
>gi|302874614|ref|YP_003843247.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
gi|307690775|ref|ZP_07633221.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
743B]
gi|302577471|gb|ADL51483.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
Length = 255
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRA 38
++ F + N + +S NIAN +T YRA
Sbjct: 2 LSLFWNSKSSMNAQQNKLDTISNNIANVNTTGYRA 36
>gi|170021358|ref|YP_001726312.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
gi|188494741|ref|ZP_03002011.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
gi|307136860|ref|ZP_07496216.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
gi|331640715|ref|ZP_08341862.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
gi|331671806|ref|ZP_08372602.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
gi|169756286|gb|ACA78985.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
gi|188489940|gb|EDU65043.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
gi|315616825|gb|EFU97442.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
gi|323181549|gb|EFZ66969.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
gi|331040089|gb|EGI12297.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
gi|331070795|gb|EGI42154.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
Length = 261
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
YE+N K++ + M+ ++ +
Sbjct: 238 RAYEMNAKMVSAADDMLQYISQ 259
>gi|262273528|ref|ZP_06051342.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
101886]
gi|262222506|gb|EEY73817.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
101886]
Length = 243
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + F S ++ Q++++ N+AN +T +RA DI +++ Q + T
Sbjct: 1 MDKL-LFTAVSGATRVITA-QQVLANNLANVNTDGFRA-DIGLAKSVEIQGKGLETRTLT 57
Query: 61 HLKESDSSGLHWNAHVIEAPLD 82
+ + S + PLD
Sbjct: 58 GIGSTWSDFTPGALKRTDNPLD 79
>gi|310641552|ref|YP_003946310.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
gi|309246502|gb|ADO56069.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
Length = 272
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T +++ + F+ IL+Q A S++ +
Sbjct: 10 SGMKGFQTKLDVIGNNIANVNTTGFKSSRVM-FKDILSQTSSGASASGEETAGSNAKQIG 68
Query: 72 WNAHVI 77
+ V
Sbjct: 69 LGSTVS 74
>gi|170758330|ref|YP_001787958.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
str. Loch Maree]
gi|169405319|gb|ACA53730.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 263
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S N+AN +T Y+ +D+ SF+ ++ + + T ++ +G A Q
Sbjct: 22 ISNNLANVNTVGYKREDV-SFQELVQETLKRKG-YPTSDRQEIQTGTGVKATNWIRDTHQ 79
Query: 84 TTGVQVSGNTVGI--TNE---LYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN + + Y YE + + N M+
Sbjct: 80 QGILLNTGNKTDLAIDGQGFFRVIMSDGNYAYERSGNFVIDRNGML 125
>gi|163738060|ref|ZP_02145476.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
BS107]
gi|163742544|ref|ZP_02149930.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
2.10]
gi|161384129|gb|EDQ08512.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
2.10]
gi|161388676|gb|EDQ13029.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
BS107]
Length = 261
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ +IA+ R + +S N+AN +T Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARR-AEFADLHYQQVTRAGTVNASDG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
T L GL A I L Q + +GN + +
Sbjct: 60 TVLPTGVQVGLGVRASAISIHLAQ-GALSQTGNDLDV 95
>gi|125972995|ref|YP_001036905.1| protein of unknown function DUF1078-like protein [Clostridium
thermocellum ATCC 27405]
gi|256004792|ref|ZP_05429767.1| protein of unknown function DUF1078 domain protein [Clostridium
thermocellum DSM 2360]
gi|281417206|ref|ZP_06248226.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
gi|125713220|gb|ABN51712.1| protein of unknown function DUF1078-like protein [Clostridium
thermocellum ATCC 27405]
gi|255991242|gb|EEU01349.1| protein of unknown function DUF1078 domain protein [Clostridium
thermocellum DSM 2360]
gi|281408608|gb|EFB38866.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
gi|316940769|gb|ADU74803.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
1313]
Length = 440
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ N+AN +T +++ ++ F+ + +Q A + + ++ +
Sbjct: 10 SGLQAHQTKMDVIGNNVANVNTVGFKSSRVT-FQEVFSQTLKGASSPDPTTGRGGTNPMQ 68
Query: 72 WNAHVIEAPLD 82
+ A +D
Sbjct: 69 VGLGLGVATID 79
>gi|332187904|ref|ZP_08389637.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
gi|332012065|gb|EGI54137.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
Length = 262
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
IA + R +++S N+AN +T ++ +D ++FET+ Q +
Sbjct: 8 IARTGLDAQDMRMRVISNNLANVNTTGFK-RDRAAFETLAYQTITAPGAASS 58
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%)
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
+ + +L E+ +SG Q + G+ V + EL
Sbjct: 177 ATFPNPAGLQSKGDNYLTETAASGAVNMGVAGLEGRGQIRQGMLEGSNVNVVEELVDMIE 236
Query: 106 IKYLYELNTKLIKKLNSMVMHV 127
+ YE+N+K+IK + M+ +
Sbjct: 237 TQRAYEVNSKMIKSTDEMLQYA 258
>gi|168334552|ref|ZP_02692708.1| hypothetical protein Epulo_06138 [Epulopiscium sp. 'N.t.
morphotype B']
Length = 473
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++++ ++ F + Q A T + +
Sbjct: 10 SGLQSHQLKMDVIGNNIANVNTIGFKSQRVT-FADVYYQTTQSATTANEMTGLGGMNAMQ 68
Query: 72 WNAHVIEAPLD 82
+ +D
Sbjct: 69 IGLGTSVSSID 79
>gi|86356330|ref|YP_468222.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
gi|86280432|gb|ABC89495.1| flagellar hook protein [Rhizobium etli CFN 42]
Length = 434
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R VS+NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSTTDLAISGDG 89
>gi|163803171|ref|ZP_02197054.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
gi|159173071|gb|EDP57904.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
Length = 261
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG E + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETAASGSADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|118589965|ref|ZP_01547369.1| flagellar hook-associated protein K [Stappia aggregata IAM 12614]
gi|118437462|gb|EAV44099.1| flagellar hook-associated protein K [Stappia aggregata IAM 12614]
Length = 454
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ N V L +T + V I E+ I+ Y T+LI +++M+
Sbjct: 392 MTSNVEVQTVILSRTAENLNNKTGVNIDEEMTLLLEIERSYSAATRLISAVDAML 446
>gi|150395479|ref|YP_001325946.1| flagellar basal body rod protein FlgF [Sinorhizobium medicae
WSM419]
gi|150026994|gb|ABR59111.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
Length = 241
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
++SQ A L +R +++NIAN++T +RA ++ F +L
Sbjct: 9 LSSQMA--LEKRLNTLADNIANSNTVGFRATEVK-FNQVL 45
>gi|28211333|ref|NP_782277.1| flagellar basal body rod protein FlgB [Clostridium tetani E88]
gi|28203773|gb|AAO36214.1| flagellar basal-body rod protein flgB [Clostridium tetani E88]
Length = 142
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 10/84 (11%)
Query: 35 NYRAKDISSFETILNQN---FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
Y+ + FE L +N + T H+ G ++ D+T+ ++ G
Sbjct: 50 GYK-RHYVEFEESLRKNRENLDLKFTKNRHISTEVEYGK------MQIKRDETSSMRKDG 102
Query: 92 NTVGITNELYKSGHIKYLYELNTK 115
N V I E +Y
Sbjct: 103 NNVDIETEKVNQAANTLMYNALIS 126
>gi|294501851|ref|YP_003565551.1| flagellar hook-basal body complex protein FlhO [Bacillus
megaterium QM B1551]
gi|294351788|gb|ADE72117.1| flagellar hook-basal body complex protein FlhO [Bacillus
megaterium QM B1551]
Length = 274
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 7 FQIASQHANWLSERQ-KIVSENIANASTPNYRAK--DISSFETILNQNFL 53
F A+ +RQ +++ NIANA+TP ++A + +F +L Q
Sbjct: 5 FYTAAAGM-LSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRME 53
>gi|221309506|ref|ZP_03591353.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313830|ref|ZP_03595635.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318753|ref|ZP_03600047.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323025|ref|ZP_03604319.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767369|ref|NP_389511.2| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
subtilis str. 168]
gi|321315395|ref|YP_004207682.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
gi|239938626|sp|P23446|FLGG_BACSU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|142919|gb|AAA22444.1| flgG [Bacillus subtilis]
gi|225184996|emb|CAB13502.2| flagellar hook protein [Bacillus subtilis subsp. subtilis str.
168]
gi|320021669|gb|ADV96655.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
Length = 264
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++ ++ F+ +++Q + ++S +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVGFKKSRVT-FKDMVSQTIAGGSAAGATIGGTNSKQIG 68
Query: 72 WNAHVIEAPLDQTTGVQVS-GNTVGI 96
+ +T S G T+ +
Sbjct: 69 LGSSSGTIDTIHSTSATQSTGRTLDL 94
>gi|32474824|ref|NP_867818.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
gi|32445364|emb|CAD75365.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
gi|327539962|gb|EGF26561.1| flagellar basal-body rod protein FlgC [Rhodopirellula baltica WH47]
Length = 143
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 9/129 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANA--------STPNYRAKDISSFETILNQNFLMA 55
I+ I++ R +S NIAN + Y+A+ + A
Sbjct: 6 ISALDISTSALVAQRTRLNAISGNIANISSLVDENGNPSPYQARQVVFQTDETASPGEAA 65
Query: 56 RTHETHLKESDSSGLH-WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + +S L+ + A + V+ + +T ++ + YE N
Sbjct: 66 GVKVSEVMLDESEPLYRYQPDHPLAINEGKWEGYVAYPNIDLTTQMVDALESTRAYEANV 125
Query: 115 KLIKKLNSM 123
+I+ M
Sbjct: 126 GVIEISKGM 134
>gi|291484181|dbj|BAI85256.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
natto BEST195]
Length = 264
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++ ++ F+ +++Q + ++S +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVGFKKSRVT-FKDMVSQTIAGGSAAGATIGGTNSKQIG 68
Query: 72 WNAHVIEAPLDQTTGVQVS-GNTVGI 96
+ +T S G T+ +
Sbjct: 69 LGSSSGTIDTIHSTSATQSTGRTLDL 94
>gi|222148673|ref|YP_002549630.1| flagellar hook protein [Agrobacterium vitis S4]
gi|221735659|gb|ACM36622.1| flagellar hook protein [Agrobacterium vitis S4]
Length = 108
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYR 37
M A+ R ++ NIANA TP Y+
Sbjct: 1 MSISGVLNSATSGMLAQQTRLTNIASNIANADTPGYQ 37
>gi|92116887|ref|YP_576616.1| flagellar hook-associated protein [Nitrobacter hamburgensis X14]
gi|91799781|gb|ABE62156.1| Flagellar hook-associated protein [Nitrobacter hamburgensis X14]
Length = 619
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
M + IA IVS N+ANA+TP Y A+ +
Sbjct: 1 MSLSSALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTL 41
>gi|4928060|gb|AAD33398.1|AF129422_1 flagellar hook protein FlgE [Sinorhizobium meliloti]
Length = 396
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 12 QHANWLSERQKIVSENIANASTPNYR 37
N S R V+ENIANA+T Y+
Sbjct: 6 SGMNAQSNRLSTVAENIANANTTGYK 31
>gi|39912|emb|CAA39528.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
168]
Length = 264
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++ ++ F+ +++Q + ++S +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVGFKKSRVT-FKDMVSQTIAGGSAAGATIGGTNSKQIG 68
Query: 72 WNAHVIEAPLDQTTGVQVS-GNTVGI 96
+ +T S G T+ +
Sbjct: 69 LGSSSGTIDTIHSTSATQSTGRTLDL 94
>gi|296274007|ref|YP_003656638.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
7299]
gi|296098181|gb|ADG94131.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
7299]
Length = 153
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 26/132 (19%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHET 60
+ IAS + R +VS NIANA T + Y+ +++ E +L++N +
Sbjct: 7 YNIASSGMSAQRTRINVVSANIANAKTTHSTDGGPYKKQNVVFQEMLLSENEKLKANDNQ 66
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGV----------QVSG-------NTVGITNELYKS 103
+ + S + + + + G N V E+
Sbjct: 67 DKQSTLPSKNLSGVGIKQIVESKDKPIMKFEPDHPDANADGYVAYPNINPVI---EMVDL 123
Query: 104 GHIKYLYELNTK 115
YE N
Sbjct: 124 IEAMRSYEANVS 135
>gi|2916790|emb|CAA11956.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
Length = 229
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETIL 48
L +R +++NIAN++T +RA ++ F +L
Sbjct: 3 LEKRLNTLADNIANSNTVGFRATEVK-FNQVL 33
>gi|307318929|ref|ZP_07598360.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
gi|306895343|gb|EFN26098.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
Length = 402
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 12 QHANWLSERQKIVSENIANASTPNYR 37
N S R V+ENIANA+T Y+
Sbjct: 12 SGMNAQSNRLSTVAENIANANTTGYK 37
>gi|170022971|ref|YP_001719476.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
YPIII]
gi|169749505|gb|ACA67023.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
YPIII]
Length = 102
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
F IA+ N +E+ +S NIAN++T ++A + F ++ Q+ +
Sbjct: 3 FSIANTALNAHTEQLNTISNNIANSATKGFKASR-TEFSSMYAQSQPLGVA 52
>gi|89895710|ref|YP_519197.1| hypothetical protein DSY2964 [Desulfitobacterium hafniense Y51]
gi|89335158|dbj|BAE84753.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 383
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+ ++ NIAN +T ++ ++ F T+L+Q A + + ++ + + + V
Sbjct: 15 HQIKMDVIGNNIANVNTTGFKRSRVT-FSTMLSQTMKGAGSPSANQGGTNPAQIGLGSMV 73
Query: 77 IEAPLDQTTGVQVS 90
T G S
Sbjct: 74 SSIDQIMTPGSSQS 87
>gi|307546966|ref|YP_003899445.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM
2581]
gi|307218990|emb|CBV44260.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM
2581]
Length = 260
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I A + ++S N+AN +T ++ + + FE +L QN +++
Sbjct: 2 INSLWTAKTGLESQQVKLDVISNNLANVNTNGFK-RSRAVFEDLLYQNLRQPGAQ-NNVQ 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ---TTGVQVSGNTVGI 96
SG+ V ++ G++ +GN+ +
Sbjct: 60 NRLPSGMQVGTGVRPVATERLHTQGGLENTGNSRDL 95
>gi|301631988|ref|XP_002945073.1| PREDICTED: flagellar basal-body rod protein flgF-like [Xenopus
(Silurana) tropicalis]
Length = 430
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNA 74
++ RQ ++S N+AN ST +RA ++S+F ++ +SG
Sbjct: 197 TLVAHRQAVLSNNLANVSTNGFRA-EMSTFRSV---PMQGDGATTRVFALEATSG----- 247
Query: 75 HVIEAPLDQTTGVQVSGNTV 94
HV Q TG + V
Sbjct: 248 HVQTPGQVQRTGRNLDAMAV 267
>gi|296330843|ref|ZP_06873318.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674361|ref|YP_003866033.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151848|gb|EFG92722.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412605|gb|ADM37724.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 264
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++ ++ F+ +++Q + ++S +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVGFKKSRVT-FKDMVSQTIAGGSAAGATIGGTNSKQIG 68
Query: 72 WNAHVIEAPLDQTTGVQVS-GNTVGI 96
+ +T S G T+ +
Sbjct: 69 LGSSSGTIDTIHSTSATQSTGRTLDL 94
>gi|254780525|ref|YP_003064938.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040202|gb|ACT56998.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus
str. psy62]
Length = 421
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
M + + A + S R VS+NIAN T Y+ + +F +++
Sbjct: 1 MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYK-RTAIAFSSLV 47
>gi|163744345|ref|ZP_02151705.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
gi|161381163|gb|EDQ05572.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
Length = 468
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKD 40
M + F IA + R +V+ NIANA T Y ++
Sbjct: 1 MSISSAFNIARSGLSTTEGRASLVAGNIANAQTEGYARRE 40
>gi|187925761|ref|YP_001897403.1| hypothetical protein Bphyt_3791 [Burkholderia phytofirmans PsJN]
gi|187716955|gb|ACD18179.1| protein of unknown function DUF1078 domain protein [Burkholderia
phytofirmans PsJN]
Length = 503
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + A ++ + + + +
Sbjct: 19 VIGNNIANANTVGFKS-GAAQFADMYANSVATAVGNQVGIGTKLAEVQQQFSQGTITSTN 77
Query: 83 QTTGVQVSGN 92
Q V ++GN
Sbjct: 78 QALDVAINGN 87
>gi|327193059|gb|EGE59971.1| flagellar hook protein [Rhizobium etli CNPAF512]
Length = 434
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R VS+NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSTTDLAISGDG 89
>gi|224825779|ref|ZP_03698883.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
gi|224602003|gb|EEG08182.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
Length = 262
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 32/68 (47%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+ +SG + L + + G+ V + E+ + YE+NTK++ +
Sbjct: 192 FQETTASGTPTVGNPGSDALGKLKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAAD 251
Query: 122 SMVMHVVR 129
+M+ ++ +
Sbjct: 252 NMMQYLAQ 259
>gi|188586026|ref|YP_001917571.1| protein of unknown function DUF1078 domain protein
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350713|gb|ACB84983.1| protein of unknown function DUF1078 domain protein
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 508
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
R + N+AN +T ++ D +F+ NQ A
Sbjct: 10 SGLRNHQTRLDTIGNNVANVNTAGFKG-DRVTFQDAFNQTLEAASA 54
>gi|150395503|ref|YP_001325970.1| flagellar hook protein FlgE [Sinorhizobium medicae WSM419]
gi|150027018|gb|ABR59135.1| flagellar basal body FlaE domain protein [Sinorhizobium medicae
WSM419]
Length = 402
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 12 QHANWLSERQKIVSENIANASTPNYR 37
N S R V+ENIANA+T Y+
Sbjct: 12 SGMNAQSNRLSTVAENIANANTTGYK 37
>gi|332798814|ref|YP_004460313.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp.
Re1]
gi|332696549|gb|AEE91006.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp.
Re1]
Length = 459
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 1 MQPITFFQIASQHANWLSER-QKIVSENIANASTPNYRAKDI 41
MQ ++ A + ++R Q+ V+ N++NA+TP Y + +
Sbjct: 1 MQSSFLGIEIAKTALFANQRAQQTVAHNVSNANTPGYSRQRV 42
>gi|323699248|ref|ZP_08111160.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
gi|323459180|gb|EGB15045.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
ND132]
Length = 541
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART---------HETHLKESDS 67
S+ +++ N+AN +T Y+ DI F +++Q ++ + + S
Sbjct: 16 HSQGMSVLANNLANVNTIGYKRSDIL-FGDLISQQVATGGALYDNGDVRINQMGMGVAVS 74
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSG 91
+ + + T + +SG
Sbjct: 75 AIRGIFTEGALSETTEATDLAISG 98
>gi|297617147|ref|YP_003702306.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144984|gb|ADI01741.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 487
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--------LMARTHET--H 61
R ++ NIAN +T Y+ K + F+ Q T+
Sbjct: 10 SGLRTHQLRMDVIGNNIANVNTVGYK-KSRAIFKDAFYQAIRGGSAPTGARGGTNPQAIG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L SS + T + + GN
Sbjct: 69 LGVQLSSVDVIATPGSAQTTGKNTDLAIDGN 99
>gi|283834453|ref|ZP_06354194.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
29220]
gi|291070000|gb|EFE08109.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
29220]
Length = 261
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
++ + E+ +SG E L + G+ V I NE+ ++
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQDGALEGSNVDIVNEMVAMITVQ 237
Query: 108 YLYELNTKLIKKLNSMVM 125
YE+N K++ + M+
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255
>gi|257866376|ref|ZP_05646029.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
EC30]
gi|257871287|ref|ZP_05650940.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
gi|257873108|ref|ZP_05652761.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
EC10]
gi|257875989|ref|ZP_05655642.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
EC20]
gi|257800334|gb|EEV29362.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
EC30]
gi|257805451|gb|EEV34273.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
gi|257807272|gb|EEV36094.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
EC10]
gi|257810155|gb|EEV38975.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
EC20]
Length = 138
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 31/99 (31%), Gaps = 7/99 (7%)
Query: 23 IVSENIANAST------PNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+S NIAN +T Y+ K I E + N T+ + + +
Sbjct: 23 TISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGTPATYGVKVTGIAADETEKLTYD 82
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
P G N V I +E+ YE N
Sbjct: 83 PTNPAANDEGYVGQSN-VDIADEMVAMLQAVRTYEANVS 120
>gi|170755952|ref|YP_001782255.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
str. Okra]
gi|169121164|gb|ACA45000.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
Okra]
Length = 255
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 17 LSERQKIVSENIANASTPNYRAKDI--SSFETILNQN 51
L +Q +S N++NAST Y++ D+ FE +L +N
Sbjct: 15 LEAKQDTISANLSNASTVGYKSTDLAFKKFEDVLMEN 51
>gi|332704840|ref|ZP_08424928.1| flagellar basal body rod protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554989|gb|EGJ52033.1| flagellar basal body rod protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 126
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 8/115 (6%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
Q + ++ + + + N+AN +T +RA + L + ++ G H
Sbjct: 8 QALDAVAIQLMVTANNVANVNTEEFRAARVD-----LEDGYQGQGVRVADIRRRSDQGPH 62
Query: 72 WNAHVIEAPLDQTTGVQ---VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ V G+ + EL + + Y N ++++ + M
Sbjct: 63 IPDNPERLAAAGYATAAEGWVQGSNTDLAVELTRLMREEATYTANLRVMRTAHEM 117
>gi|325567533|ref|ZP_08144200.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
ATCC 12755]
gi|325158966|gb|EGC71112.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
ATCC 12755]
Length = 138
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 31/99 (31%), Gaps = 7/99 (7%)
Query: 23 IVSENIANAST------PNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+S NIAN +T Y+ K I E + N T+ + + +
Sbjct: 23 TISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGTPATYGVKVTGIAADETEKLTYD 82
Query: 77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
P G N V I +E+ YE N
Sbjct: 83 PTNPAANAEGYVGQSN-VDIADEMVAMLQAVRTYEANVS 120
>gi|319764540|ref|YP_004128477.1| flagellar basal-body rod protein flgf [Alicycliphilus
denitrificans BC]
gi|317119101|gb|ADV01590.1| flagellar basal-body rod protein FlgF [Alicycliphilus
denitrificans BC]
Length = 246
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A+ + RQ +++ N+AN ST +RA ++SSF ++ + + +SG
Sbjct: 12 ASAAAHRQAVLANNLANVSTNGFRA-EMSSFRSV---PLQGSGSTTRVFALEATSG---- 63
Query: 74 AHVIEAPLDQTTGVQVS 90
HV Q TG +
Sbjct: 64 -HVETPGPVQRTGRNLD 79
>gi|153011508|ref|YP_001372722.1| flagellar hook protein FlgE [Ochrobactrum anthropi ATCC 49188]
gi|151563396|gb|ABS16893.1| flagellar basal body FlaE domain protein [Ochrobactrum anthropi
ATCC 49188]
Length = 426
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 3 PITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
P++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 29 PMSLYGMMRTGVSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQY--NS 86
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 87 GSVLTDVRYGISDQGGIR--STSSTTDLAIDGN 117
>gi|260574401|ref|ZP_05842405.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
gi|259023297|gb|EEW26589.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
Length = 261
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI----LNQNFLMARTHE 59
+ QIA+ R +VS N+AN ST Y A+ + F + L + ++
Sbjct: 1 MNALQIAASGMAAQQMRVDVVSNNLANMSTTGYNARR-ADFADLHYQQLARPGTVSAQDG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
T L GL + + Q T Q G
Sbjct: 60 TILPTGVQLGLGVRPAAVSMVMAQGTLAQTGG 91
>gi|213418946|ref|ZP_03352012.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 226
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTQGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|190890382|ref|YP_001976924.1| flagellar hook protein [Rhizobium etli CIAT 652]
gi|190695661|gb|ACE89746.1| flagellar hook protein [Rhizobium etli CIAT 652]
Length = 433
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A N + R VS+NIAN +T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAVSDQGDISYTTSTTDLAISGDG 89
>gi|62179695|ref|YP_216112.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62127328|gb|AAX65031.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 251
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|294508678|ref|YP_003572737.1| flagellar basal-body rod protein [Salinibacter ruber M8]
gi|294345007|emb|CBH25785.1| flagellar basal-body rod protein [Salinibacter ruber M8]
Length = 260
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ FQ A+ + + +Q+ V+ N+ANAST Y+ KD F LN+ +
Sbjct: 21 LPRFQNAAAAMSEMRLQQEQVANNLANASTTGYK-KD-RVFTEALNERLTKDGS 72
>gi|295690698|ref|YP_003594391.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
21756]
gi|295432601|gb|ADG11773.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
21756]
Length = 139
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 17/113 (15%)
Query: 20 RQKIVSENIANAS----TPN---YRAK--DISSFETILNQNFLMARTHETHLKESDSSGL 70
R ++++ENIANA+ T YR + + + M R D S
Sbjct: 25 RMRVIAENIANANSTATTAGGDPYRRQLPIFRPTKVQGAEGVQMVRVDP------DQSDF 78
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
D V++ V E + YE N +I+ M
Sbjct: 79 KTEYDPGNPAADANGYVKLP--NVNSLVEALDMKEAQRAYEANLNVIETARVM 129
>gi|149189838|ref|ZP_01868118.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
gi|148836324|gb|EDL53281.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
Length = 261
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 28/68 (41%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
KE+++SG E + G+ V + E+ + YE+N K++ +
Sbjct: 192 FKETEASGQAEELIAGEEGAGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|94263288|ref|ZP_01287104.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|94267693|ref|ZP_01290962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|94272297|ref|ZP_01292100.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93450173|gb|EAT01484.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93451895|gb|EAT02626.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93456371|gb|EAT06495.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 243
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R V+ N+AN T Y+ ++ + +E + N R + + + N +
Sbjct: 22 RLDQVANNLANVDTAGYKRQNTAFWEMLYNVTADRQRIGKG--SHTLTDHQQGNVQQTDN 79
Query: 80 PLD 82
PLD
Sbjct: 80 PLD 82
>gi|148258440|ref|YP_001243025.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
gi|146410613|gb|ABQ39119.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
Length = 466
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M T A S +S NIAN TP Y+ D +SF +++ +
Sbjct: 1 MSISTALLTAFSGMKAQSYAMANISGNIANTQTPGYKYVD-TSFSDLISSQTRKQAVAGS 59
Query: 61 HLKESDSSGLHWNA 74
+ E+ + A
Sbjct: 60 VVAEARFTNSVQGA 73
>gi|283852232|ref|ZP_06369505.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
gi|283572458|gb|EFC20445.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
Length = 518
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+VS +N T + ++ F + + R L + SG D
Sbjct: 413 VVSGTFSNGQTKDLYVLALADFRNPTD----LRREGNNLLSATTESGAATTGRANSGIYD 468
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+G + + V + E+ ++ ++ N+K++ ++M+ +
Sbjct: 469 GISGYSLESSNVDMATEMVNLITLQRAFQSNSKVVTTADTMMEKAL 514
>gi|167948872|ref|ZP_02535946.1| Flagellar basal-body rod protein FlgC [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 124
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 11/124 (8%)
Query: 14 ANWLSERQKIVSENIANASTPN------YRAKD--ISSFETILNQNFLMARTHETHLKES 65
+ S R +V+ N+AN + YRA+ + N + + ES
Sbjct: 1 MSAQSLRLNLVASNMANVDAVSSSIDETYRARQPVFRAMVDQFNPDAPAVGVSMVGVIES 60
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ + A + + + + N V E+ Y+ N ++ ++M
Sbjct: 61 QAPLIREYAPDHQMADEAGYIFRPNVNPV---EEMANMISASRSYQGNVEVASAAKQLLM 117
Query: 126 HVVR 129
+R
Sbjct: 118 ATLR 121
>gi|91224201|ref|ZP_01259464.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
gi|91191112|gb|EAS77378.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
Length = 144
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 10/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKD----ISSFETILNQNFLMAR 56
M + I + R V+ N+ANA + +D + + Q M
Sbjct: 1 MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTT 60
Query: 57 THETHLKESDS-SGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLY 110
+ + + NA E + + V + E+ +
Sbjct: 61 ENGAYPNAEVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSF 120
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N +++ + SM ++R
Sbjct: 121 ETNVEVLANVKSMQQGLLR 139
>gi|302343734|ref|YP_003808263.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
gi|301640347|gb|ADK85669.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
Length = 786
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--HETHLKESDSSG 69
N + V++N+AN +T Y+A + +F ++ + + T ++ S
Sbjct: 12 AGLNVHGQALSAVADNVANVNTHGYKASRV-NFGDVMIHSLTVGGTVVNQVGTGAKVLSV 70
Query: 70 LHWNAHVIEAPLDQTTGVQVSG 91
+ D T + ++G
Sbjct: 71 QNLLTQGSFETTDVPTDMAING 92
>gi|161503734|ref|YP_001570846.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865081|gb|ABX21704.1| hypothetical protein SARI_01819 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 251
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|308050370|ref|YP_003913936.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
9799]
gi|307632560|gb|ADN76862.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
9799]
Length = 262
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKESDSSGLHWNAHVIE 78
+S N+ANAST Y+ K + FE +L Q A + T L + G +
Sbjct: 20 ATISNNLANASTVGYK-KSRAIFEDLLYQTINQAGGISSQNTELPAGLTLGAGTKVAATQ 78
Query: 79 APLDQTTGVQVSGNTVGI 96
Q + N++ +
Sbjct: 79 RIFSQGNMLTTD-NSLDL 95
>gi|288871078|ref|ZP_06116279.2| flagellar hook protein [Clostridium hathewayi DSM 13479]
gi|288864882|gb|EFC97180.1| flagellar hook protein [Clostridium hathewayi DSM 13479]
Length = 653
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ ++ NIAN +T +++ + F+ + Q A + + +++S + +
Sbjct: 1 MKAHQTKLDVIGNNIANVNTYGFKSSR-ARFQDVFYQTLQSAAGGDNNKGGTNASQVGYG 59
Query: 74 AHVIEAPLDQTTGVQVS 90
+ + LD + S
Sbjct: 60 SQLGGIDLDMSRSALQS 76
>gi|167630287|ref|YP_001680786.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
modesticaldum Ice1]
gi|167593027|gb|ABZ84775.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
modesticaldum Ice1]
Length = 159
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 32/157 (20%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------------------PNYRAK--D 40
M+ ++ ++ R I+S N+AN +T P + A+ +
Sbjct: 1 MRFLSSIDTSASGLTAQRFRMDIISNNLANVNTTRTGNSDADGVLPYRRQIPVFAARQAE 60
Query: 41 ISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQT---------TGVQVSG 91
+F + L+ ++ + +I P +
Sbjct: 61 ADTFASALSAAENRRNATGGGVRVVAVAEDESAFKMIYDPQHPDAIRTGPLTGYVRMPNV 120
Query: 92 NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
NTV E+ YE N I SM M +
Sbjct: 121 NTV---TEMVDMISATRAYEANVTAINAAKSMAMKAL 154
>gi|259417834|ref|ZP_05741753.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
gi|259346740|gb|EEW58554.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
Length = 422
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETIL 48
S R +S+NIANAST Y+ + ++SFE+++
Sbjct: 18 STRLAAISDNIANASTAGYK-RVVTSFESMV 47
>gi|187935622|ref|YP_001885067.1| flagellar basal body rod protein FlgG [Clostridium botulinum B
str. Eklund 17B]
gi|187723775|gb|ACD24996.1| flagellar hook-basal body complex protein FlhP [Clostridium
botulinum B str. Eklund 17B]
Length = 256
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F A N E+ +S ++ N ST Y+A D+ F +L ++ T +
Sbjct: 3 NIFANAQSGMNAYQEKLDYLSNDLVNTSTTGYKATDVQ-FSDLLTESLDRKGTPLVNKDA 61
Query: 65 SDSSGLHWNAHVIEAPLDQ--TTGVQVS 90
+ +G+ + TTG++
Sbjct: 62 INGTGVKLGMDYRKDTQGNLLTTGIKTD 89
>gi|88799019|ref|ZP_01114600.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
gi|88778246|gb|EAR09440.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
Length = 146
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 18/145 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M F I+ N S R + N+ANA + + YRA+ F+ I +Q
Sbjct: 1 MSLGNVFDISGSGMNAQSIRLNTTASNLANAQSVSSSIDETYRARK-PVFQHIQSQYIDR 59
Query: 55 ARTHETHLKESDSSGLHWNAHV-IEAPLD---QTTGVQVSGN------TVGITNELYKSG 104
+ + +G+ A V +APL+ + T V + E+
Sbjct: 60 SLV-PVDMDYDVGNGVEVAAIVEKDAPLEIRYEPTHPMADEEGYVYYPNVNVVEEMADMM 118
Query: 105 HIKYLYELNTKLIKKLNSMVMHVVR 129
+ +N ++ +++ +
Sbjct: 119 SASRSFTVNVEVFNTAKTLMQKTLT 143
>gi|332298513|ref|YP_004440435.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
12168]
gi|332181616|gb|AEE17304.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
12168]
Length = 265
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I S N R +S N+ANA T Y+ +D++ ++ LM R ++ + +
Sbjct: 7 IGSSGMNAQQNRLDAISNNLANADTTAYK-RDVTVSKSF--PELLMRRMNDDGVYRTPFG 63
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELN 113
V + L T + +K K L+
Sbjct: 64 SADAAPIVGKIGLGVETNELYT----DFEQGSFKQTSSKADMALS 104
>gi|330826756|ref|YP_004390059.1| flagellar basal-body rod protein FlgF [Alicycliphilus
denitrificans K601]
gi|329312128|gb|AEB86543.1| flagellar basal-body rod protein FlgF [Alicycliphilus
denitrificans K601]
Length = 246
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
A+ + RQ +++ N+AN ST +RA ++SSF ++ + + +SG
Sbjct: 12 ASAAAHRQAVLANNLANVSTYGFRA-EMSSFRSV---PLQGSGSTTRVFALEATSG---- 63
Query: 74 AHVIEAPLDQTTGVQVS----GNT 93
HV Q TG + GN
Sbjct: 64 -HVETPGPVQRTGRNLDAMAAGNA 86
>gi|296331269|ref|ZP_06873741.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676256|ref|YP_003867928.1| putative flagellar hook-basal body protein [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151384|gb|EFG92261.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414500|gb|ADM39619.1| putative flagellar hook-basal body protein [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 269
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDI-------SSFETILNQNFLMARTHETH 61
AS N L ++ +S N++N++T Y+AKD F+ + +N +A+ +T
Sbjct: 7 TASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVAKARKTP 66
Query: 62 LKESDSSGLHWNAHVIEAP 80
G N+ ++
Sbjct: 67 PGLRLGVGAMMNSRLVSDQ 85
>gi|254499121|ref|ZP_05111811.1| putative flagellar basal body rod protein [Legionella drancourtii
LLAP12]
gi|254351660|gb|EET10505.1| putative flagellar basal body rod protein [Legionella drancourtii
LLAP12]
Length = 237
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISS--FETILNQNFLMARTH 58
IT Q+A ++ + + +S+NI+N +TP ++ + I + F+ L N
Sbjct: 2 FDAITATQLA---MDYDQLKLQSISQNISNMNTPGFKRQLIENAGFDMHLQANVNQVAQQ 58
Query: 59 --ETHLKE 64
++HLK
Sbjct: 59 LEQSHLKA 66
>gi|56413835|ref|YP_150910.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197362758|ref|YP_002142395.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56128092|gb|AAV77598.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197094235|emb|CAR59740.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 251
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|16764534|ref|NP_460149.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161614599|ref|YP_001588564.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553034|ref|ZP_02346784.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994042|ref|ZP_02575134.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234104|ref|ZP_02659162.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237260|ref|ZP_02662318.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244777|ref|ZP_02669709.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264029|ref|ZP_02686002.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467130|ref|ZP_02700972.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194446055|ref|YP_002040432.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449678|ref|YP_002045177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470312|ref|ZP_03076296.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736339|ref|YP_002114177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197265515|ref|ZP_03165589.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198245943|ref|YP_002215959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200390876|ref|ZP_03217487.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205353084|ref|YP_002226885.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857314|ref|YP_002243965.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224584318|ref|YP_002638116.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911002|ref|ZP_04654839.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|120298|sp|P16323|FLGF_SALTY RecName: Full=Flagellar basal-body rod protein flgF; AltName:
Full=Putative proximal rod protein
gi|47676|emb|CAA36313.1| flgF protein product (AA 1-251) [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|16419695|gb|AAL20108.1| flagellar biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161363963|gb|ABX67731.1| hypothetical protein SPAB_02349 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404718|gb|ACF64940.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407982|gb|ACF68201.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456676|gb|EDX45515.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711841|gb|ACF91062.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630350|gb|EDX48976.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197243770|gb|EDY26390.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289883|gb|EDY29244.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940459|gb|ACH77792.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603321|gb|EDZ01867.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205272865|emb|CAR37794.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322401|gb|EDZ10240.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328032|gb|EDZ14796.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331944|gb|EDZ18708.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336412|gb|EDZ23176.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205347326|gb|EDZ33957.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709117|emb|CAR33450.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468845|gb|ACN46675.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261246389|emb|CBG24198.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992952|gb|ACY87837.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157719|emb|CBW17211.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912165|dbj|BAJ36139.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223796|gb|EFX48859.1| Flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616548|gb|EFY13457.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620511|gb|EFY17375.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622505|gb|EFY19350.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629656|gb|EFY26431.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632624|gb|EFY29370.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636881|gb|EFY33584.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641581|gb|EFY38219.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644071|gb|EFY40617.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650029|gb|EFY46447.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653954|gb|EFY50277.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658486|gb|EFY54748.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663344|gb|EFY59546.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670078|gb|EFY66218.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674858|gb|EFY70949.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676672|gb|EFY72739.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682594|gb|EFY78613.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686653|gb|EFY82632.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322714165|gb|EFZ05736.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323129448|gb|ADX16878.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195767|gb|EFZ80943.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198341|gb|EFZ83445.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323209178|gb|EFZ94115.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209682|gb|EFZ94611.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217862|gb|EGA02577.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222150|gb|EGA06534.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224922|gb|EGA09180.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229664|gb|EGA13787.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232889|gb|EGA16985.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240624|gb|EGA24666.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242938|gb|EGA26959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250255|gb|EGA34144.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252630|gb|EGA36468.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258842|gb|EGA42495.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261031|gb|EGA44624.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266940|gb|EGA50425.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269981|gb|EGA53430.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326623707|gb|EGE30052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628164|gb|EGE34507.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332988069|gb|AEF07052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 251
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|306518947|ref|ZP_07405294.1| flagellar basal body rod protein FlgG [Clostridium difficile
QCD-32g58]
Length = 182
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
T F + + + I+S NIAN+ + Y+ ++ + ++++ T+ +
Sbjct: 3 TMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINME-YSDLVDEVLNRPSYPTNGNDI 61
Query: 63 KESDSSGLHWNAHVIE----APLDQTTGVQVSG 91
+ + E AP D + + + G
Sbjct: 62 STGTGAKATAPMRIYEQGALAPTDSKSNLAIDG 94
>gi|94312669|ref|YP_585878.1| flagellar hook protein [Cupriavidus metallidurans CH34]
gi|93356521|gb|ABF10609.1| flagellar hook protein [Cupriavidus metallidurans CH34]
Length = 415
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F N + ++ NIANA+T ++ + + F + + + T + +S
Sbjct: 3 FGQGVSGLNAAASNLDVIGNNIANANTVGFK-QSTAQFADVYAGSKIGLGTRVNSVVQSF 61
Query: 67 SSG 69
++G
Sbjct: 62 TNG 64
>gi|255654320|ref|ZP_05399729.1| putative flagellar hook-associated protein [Clostridium difficile
QCD-23m63]
Length = 315
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + VSG V + E+ + I+ Y+ + K++ ++ V+ G
Sbjct: 268 DNSRMSVSG--VSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVING 313
>gi|241203106|ref|YP_002974202.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240856996|gb|ACS54663.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 262
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFK-RARAEFSDLLYQTERAKGVANRANQ 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
G + V + L + +GN + +
Sbjct: 60 AVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDV 95
>gi|149184208|ref|ZP_01862526.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
gi|148831528|gb|EDL49961.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
Length = 246
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRA 38
A + Q++++ N+ANA+T +RA
Sbjct: 4 LIHTALSGMRASMDSQRVIASNMANANTLGFRA 36
>gi|86360902|ref|YP_472789.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
gi|86285004|gb|ABC94062.1| flagellar hook protein [Rhizobium etli CFN 42]
Length = 430
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + A + + R VS+NIANA+T Y+A S +L + +
Sbjct: 1 MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ S + + + G
Sbjct: 59 GVQTSVRQAISQQGDISYTTSAYDLAISGDG 89
>gi|90021853|ref|YP_527680.1| flagellar basal body rod protein FlgG [Saccharophagus degradans
2-40]
gi|89951453|gb|ABD81468.1| Flagellar basal-body rod FlgG [Saccharophagus degradans 2-40]
Length = 261
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
E+ SSG E L + + V I E+ + YE+N+K++ + M
Sbjct: 194 ETASSGNPIQGTPGENGLGSIKQGMLENSNVDIVEEMVNMITTQRAYEMNSKVVSTSDQM 253
Query: 124 VMHVVR 129
+ + +
Sbjct: 254 LQFITQ 259
>gi|254994099|ref|ZP_05276289.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
Length = 208
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A N + + S NIANA+T Y+ + + F +L QN + + + + S
Sbjct: 7 TAISGMNAFQQALSVTSNNIANANTTGYKKQSVV-FNDLLYQNTMGSVAGGLYAGTNPMS 65
>gi|256371026|ref|YP_003108850.1| flagellar hook-associated protein FlgK [Acidimicrobium
ferrooxidans DSM 10331]
gi|256007610|gb|ACU53177.1| flagellar hook-associated protein FlgK [Acidimicrobium
ferrooxidans DSM 10331]
Length = 462
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 25/46 (54%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+V++N+ANA+TP Y+++ + L + + + ++ ++
Sbjct: 22 VVAQNVANANTPGYQSESVDLANQQLPGSPVGDGVTVQGVLQAQNT 67
>gi|168822621|ref|ZP_02834621.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|204930894|ref|ZP_03221767.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204320353|gb|EDZ05557.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205340993|gb|EDZ27757.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320086382|emb|CBY96155.1| Flagellar basal-body rod protein flgF putative proximal rod
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 251
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|183220919|ref|YP_001838915.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911015|ref|YP_001962570.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167775691|gb|ABZ93992.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779341|gb|ABZ97639.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 265
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS--SGLHWNAHVIEAP 80
V+ N+AN +T ++ K+ FE ++ Q+ ++A T T + E + + H
Sbjct: 21 TVANNLANVNTTGFK-KNRVDFEDLVYQHQVLAGTPATSVSEIPTGVNVGHGVKVAATQK 79
Query: 81 LDQTTGVQVSGNTVG--ITNELY 101
L + Q +GN + +T E+
Sbjct: 80 LFEIGSFQATGNKLDLALTGEMA 102
>gi|295401181|ref|ZP_06811154.1| flagellar hook-associated protein FlgK [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976774|gb|EFG52379.1| flagellar hook-associated protein FlgK [Geobacillus
thermoglucosidasius C56-YS93]
Length = 530
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH 58
++A + + + NIANA+TP Y + ++ ET M R
Sbjct: 8 LEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVETEPFPPASMNRPQ 59
>gi|154250318|ref|YP_001411143.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
Rt17-B1]
gi|154154254|gb|ABS61486.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
Rt17-B1]
Length = 847
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 1 MQPITFFQIASQHA--NWLSE-RQKIVSENIANASTPNY 36
M I+ F + + S+ +V+ NIANA+TP +
Sbjct: 1 MPDISLFGTLNTGLLGVYASKLAMNVVAHNIANANTPGF 39
>gi|116250482|ref|YP_766320.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum
bv. viciae 3841]
gi|115255130|emb|CAK06204.1| flgG [Rhizobium leguminosarum bv. viciae 3841]
Length = 262
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFK-RARAEFSDLLYQTERAKGVANRANQ 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
G + V + L + +GN + +
Sbjct: 60 AVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDV 95
>gi|46204472|ref|ZP_00049951.2| COG1256: Flagellar hook-associated protein [Magnetospirillum
magnetotacticum MS-1]
Length = 181
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 23/63 (36%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ + +VS+NIAN T Y + +S + + T L
Sbjct: 3 LDAFSTATAGLRVTQAQIGVVSQNIANVGTAGYVRRTLSPVTSGTGNAGVATGTIARALD 62
Query: 64 ESD 66
+
Sbjct: 63 TAA 65
>gi|307720251|ref|YP_003891391.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
DSM 16294]
gi|306978344|gb|ADN08379.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
DSM 16294]
Length = 164
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 31/156 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQNFL 53
+ F I+ + R +S NIANA T YR +++ +F + N+
Sbjct: 5 LNSFDISGYGLSAQRVRVNTISSNIANAQTTRTDEGGPYRRREVVFKAINFNDVYNKALG 64
Query: 54 MARTHETHLKESDSS--GLHWNAHVIEAPLD-------------QTTGVQVSGN------ 92
+ + G N ++ +D + N
Sbjct: 65 ENTQSAKYEDPLNEGEFGKKVNPAIMSVVVDKVIRDDSKPLMKFEPNNPDADANGYVAYP 124
Query: 93 TVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ E+ Y+ N + M +
Sbjct: 125 NINPVVEMSDLVEATRSYQANVAAFQSAKDMANSAI 160
>gi|298345988|ref|YP_003718675.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
gi|304390254|ref|ZP_07372208.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315654575|ref|ZP_07907481.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
51333]
gi|315657519|ref|ZP_07910401.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236049|gb|ADI67181.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
gi|304326736|gb|EFL93980.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315491039|gb|EFU80658.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
51333]
gi|315491991|gb|EFU81600.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 132
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 44/134 (32%), Gaps = 10/134 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFET--ILNQNFLMAR-- 56
M IA + +S+NIAN +T + + +F ++ Q R
Sbjct: 1 MTTFGAIGIAGTGMTVNRKWLDCISDNIANINTT--KPMNEEAFRARYVVAQAVDYGRPA 58
Query: 57 -THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
T + + + G ++ + + +++ + + Y+ N
Sbjct: 59 GTMVSGIALGGTDGRIVYDPRDPNANEEGYVRHPD---IDLGSQMTQLIMAQRAYQANAA 115
Query: 116 LIKKLNSMVMHVVR 129
++ + S ++
Sbjct: 116 VVDRAKSTYEAALQ 129
>gi|34558066|ref|NP_907881.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
gi|34483784|emb|CAE10781.1| FLAGELLAR HOOK PROTEIN FLGE [Wolinella succinogenes]
Length = 745
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFL 53
VS NIAN +T YRA +I FET+ ++
Sbjct: 22 VSNNIANVNTTGYRA-NIPQFETLFAKSMS 50
>gi|302387782|ref|YP_003823604.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
WM1]
gi|302198410|gb|ADL05981.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
WM1]
Length = 148
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 42/144 (29%), Gaps = 16/144 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA-----KDISSFETILNQNFLMA 55
M ++ I++ R I SENIAN T A + + E NF
Sbjct: 1 MSFLSSMNISASAMTAQRLRLDIASENIANIDTTRTEAGGPYRRKMVVLEARSENNFRRT 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEA-----PLDQTTGVQVSGN------TVGITNELYKSG 104
+ L S+G + ++E + N V + E S
Sbjct: 61 LMNAAGLGRQQSTGGIRVSQIVEDASPFKSVYSPEHPDADENGYVQMPNVDLIKETVDSM 120
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
YE N + M +
Sbjct: 121 SATRSYEANITAFNAIKFMASKAL 144
>gi|226950050|ref|YP_002805141.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
Kyoto]
gi|226841546|gb|ACO84212.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
Kyoto]
Length = 263
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S N+AN +T Y+ +D+ SF+ ++ + + T + +G A Q
Sbjct: 22 ISNNLANVNTVGYKREDV-SFQELVQETLKRKG-YPTSDRPEIQTGTGVKATNWIRDTHQ 79
Query: 84 TTGVQVSGNTVGI--TNE---LYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN + + Y YE + + N M+
Sbjct: 80 QGALLTTGNKTDLAIDGQGFFRVIMADGDYAYERSGNFLIDRNGML 125
>gi|197251378|ref|YP_002146865.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197215081|gb|ACH52478.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 251
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTPGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|2275161|gb|AAB81413.1| FlgG [Sinorhizobium meliloti]
Length = 262
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+ IA+ N ++++ NIAN +T Y+ + + F +L Q
Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYK-RARAEFSDLLYQT 47
>gi|83310488|ref|YP_420752.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
gi|82945329|dbj|BAE50193.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
Length = 545
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH-LKES 65
F ASQ + +S+NIAN +T Y+ K+ + F+T+L++ T + K +
Sbjct: 6 FTNASQAMQTMDWAMGSISQNIANVNTTGYKEKE-TLFKTVLSETHTSPPTSQNSPTKNT 64
Query: 66 DSSGLHW 72
++GL
Sbjct: 65 ATTGLDI 71
>gi|322832565|ref|YP_004212592.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602]
gi|321167766|gb|ADW73465.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602]
Length = 251
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
A A+ +Q + S N+ANA+TP +R++ ++ ++ L RT
Sbjct: 7 TAGGAASQTLVQQSVTSSNLANANTPGFRSQLLAMRAVPVDGESLQTRT 55
>gi|315636319|ref|ZP_07891569.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
gi|315479408|gb|EFU70091.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
Length = 262
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--LMARTHETHLKESD 66
A+ N + + + S NIAN +T ++ KD + F+ ++ ++ RT +T L +
Sbjct: 7 TAATGMNAMQHQIDVTSNNIANVNTTGFK-KDRAEFQDLMYESLNYTAGRTTQTTLNPTG 65
>gi|294339841|emb|CAZ88204.1| Flagellar basal-body rod protein flgG (Distal rod protein)
[Thiomonas sp. 3As]
Length = 261
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I +A R +++ N+AN +T ++ + F+ +L QN +
Sbjct: 2 IRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSR-AVFQDLLYQNLTQPGAQSSQ-S 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ---TTGVQVSGNTVGI 96
SGL V ++ + +GN++ +
Sbjct: 60 TQYPSGLQLGTGVRPVSTERLMTQGNLTQTGNSLDV 95
>gi|86356312|ref|YP_468204.1| flagellar basal body rod protein FlgG [Rhizobium etli CFN 42]
gi|86280414|gb|ABC89477.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
Length = 262
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFK-RARAEFTDLLYQTERAKGVANRANQ 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
G + V + L + +GN + +
Sbjct: 60 AVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDV 95
>gi|225375330|ref|ZP_03752551.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans
DSM 16841]
gi|225212819|gb|EEG95173.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans
DSM 16841]
Length = 550
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA----RTHETHLKES 65
A R ++ NIAN +T +++ ++ F IL Q A T T +
Sbjct: 8 AVSGLKTHQTRMDVIGNNIANVNTVAFKSSSVT-FSDILYQTTSNASGANATTGTGGVNA 66
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGN 92
GL A + + + +GN
Sbjct: 67 KQIGLGTTAAATKVSITSAGASETTGN 93
>gi|154175290|ref|YP_001408541.1| flagellar basal body rod protein FlgC [Campylobacter curvus 525.92]
gi|112803036|gb|EAU00380.1| flagellar basal-body rod protein FlgC [Campylobacter curvus 525.92]
Length = 167
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 37/163 (22%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQ 50
M + F I+ + R ++S NIANA T YR +++ F+ ILN+
Sbjct: 1 MSYLNDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKAFDFDKILNE 60
Query: 51 NFLMAR-----------------THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG-- 91
+ H + + + + + +G
Sbjct: 61 EMKNSGGLLEYENPLDDPSSPKNAHPSLMSVVVDKVVRDDKDFMLKYDPSHPDANANGYV 120
Query: 92 -----NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
N V E+ Y+ N + + +
Sbjct: 121 AFPNINPVI---EMADLVEATRAYQANVAAFQSAKMIAQSAIT 160
>gi|312109475|ref|YP_003987791.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
gi|311214576|gb|ADP73180.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
Length = 534
Score = 34.9 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH 58
++A + + + NIANA+TP Y + ++ ET M R
Sbjct: 8 LEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVETEPFPPASMNRPQ 59
>gi|220903670|ref|YP_002478982.1| hypothetical protein Ddes_0391 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867969|gb|ACL48304.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 265
Score = 34.9 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
R ++ N+ANA+T Y+ ++ +T++ F R +LK NA +
Sbjct: 18 RMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNLKSKPLFPEPLNASRVRL 77
Query: 80 PLD----QTTGVQVSGNTVGI 96
+ +Q SGN + +
Sbjct: 78 AVSKIDFAQGSMQYSGNPLDM 98
>gi|257457574|ref|ZP_05622741.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
35580]
gi|257444960|gb|EEV20036.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
35580]
Length = 264
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART-------HETH 61
A+ N V+ N+AN +T ++ K + FE +L Q A T
Sbjct: 7 TAATGMNSQQANIDTVANNLANVNTSGFK-KQRAEFEDLLYQTIRAAGTPATEDTITPVG 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ + L E Q TGV
Sbjct: 66 VEMGHGAKLAATQRNFEQGSLQQTGVSTD 94
>gi|296135671|ref|YP_003642913.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
gi|295795793|gb|ADG30583.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
Length = 261
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I +A R +++ N+AN +T ++ + F+ +L QN +
Sbjct: 2 IRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSR-AVFQDLLYQNLTQPGAQSSQ-S 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ---TTGVQVSGNTVGI 96
SGL V ++ + +GN++ +
Sbjct: 60 TQYPSGLQLGTGVRPVSTERLMTQGNLTQTGNSLDV 95
>gi|253574272|ref|ZP_04851614.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846749|gb|EES74755.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 273
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A + + +R ++++NIAN++T Y+ K+ ++FE L + ++ +S
Sbjct: 8 AMVSMSGIQQRLDLLADNIANSNTVGYKRKE-ANFEDTLTRV------------QNQTSD 54
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVG 95
L+ + G ++S TV
Sbjct: 55 LNLPGRATPSGFTLGFGSRMSQVTVN 80
>gi|303240279|ref|ZP_07326798.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
gi|302592189|gb|EFL61918.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
Length = 439
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ N+AN +T Y++ ++ F+ + +Q A +T ++ +
Sbjct: 10 SGLRAHQTKMDVIGNNVANVNTVAYKSGRVT-FQEVFSQTIKGAGAPDTATGRGGTNPMQ 68
Query: 72 WNAHVIEAPLDQTT 85
+ + +D T
Sbjct: 69 VGLGIGVSSVDTIT 82
>gi|254559638|ref|YP_003066733.1| flagellar hook-associated protein 1 FlgK [Methylobacterium
extorquens DM4]
gi|254266916|emb|CAX22715.1| putative flagellar hook-associated protein 1 FlgK
[Methylobacterium extorquens DM4]
Length = 632
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ + +VS+NIAN T Y + ++ + + T L
Sbjct: 3 LDAFSTATAGLRVTQAQIGVVSQNIANVGTAGYVRRTLAPITSGSGNAGVATGTVARALD 62
Query: 64 ESD 66
+
Sbjct: 63 AAA 65
>gi|218528944|ref|YP_002419760.1| flagellar hook-associated protein FlgK [Methylobacterium
chloromethanicum CM4]
gi|218521247|gb|ACK81832.1| flagellar hook-associated protein FlgK [Methylobacterium
chloromethanicum CM4]
Length = 632
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ + +VS+NIAN T Y + ++ + + T L
Sbjct: 3 LDAFSTATAGLRVTQAQIGVVSQNIANVGTAGYVRRTLAPITSGSGNAGVATGTVARALD 62
Query: 64 ESD 66
+
Sbjct: 63 AAA 65
>gi|163850384|ref|YP_001638427.1| flagellar hook-associated protein FlgK [Methylobacterium
extorquens PA1]
gi|163661989|gb|ABY29356.1| flagellar hook-associated protein FlgK [Methylobacterium
extorquens PA1]
Length = 632
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ + +VS+NIAN T Y + ++ + + T L
Sbjct: 3 LDAFSTATAGLRVTQAQIGVVSQNIANVGTAGYVRRTLAPITSGSGNAGVATGTVARALD 62
Query: 64 ESD 66
+
Sbjct: 63 AAA 65
>gi|15964415|ref|NP_384768.1| flagellar basal body rod protein FlgG [Sinorhizobium meliloti
1021]
gi|307311557|ref|ZP_07591198.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
BL225C]
gi|307318912|ref|ZP_07598343.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
AK83]
gi|17380480|sp|Q52946|FLGG_RHIME RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|15073592|emb|CAC45234.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
gi|306895326|gb|EFN26081.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
AK83]
gi|306899574|gb|EFN30203.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
BL225C]
Length = 262
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+ IA+ N ++++ NIAN +T Y+ + + F +L Q
Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYK-RARAEFSDLLYQT 47
>gi|316931494|ref|YP_004106476.1| hypothetical protein Rpdx1_0099 [Rhodopseudomonas palustris DX-1]
gi|315599208|gb|ADU41743.1| protein of unknown function DUF1078 domain protein
[Rhodopseudomonas palustris DX-1]
Length = 136
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 12/132 (9%)
Query: 6 FFQIASQHANWLSERQKIVSENIAN---------ASTPNYRAKDISSFETILNQNFLMAR 56
IA N + R ++ + NIAN A+ L N
Sbjct: 4 IASIAVSGLNAATRRLEVSASNIANQRSTGTLPGAN--GTVPAGAPQAYKPLQVNQTDTS 61
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
T T + +S +AP G+ + N V + E KY Y N
Sbjct: 62 TGGTQTSLATTSPATVPVSDPQAPFADADGMVAAPN-VDLAQEFIGQMVAKYSYAANLAS 120
Query: 117 IKKLNSMVMHVV 128
++ M ++
Sbjct: 121 LQADRDMTKALL 132
>gi|260429403|ref|ZP_05783380.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
gi|260420026|gb|EEX13279.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
Length = 261
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ +IA+ + R +++S N++N ST Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARR-AEFADLHYQQIARAGTINASDG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
T L GL + L+Q G
Sbjct: 60 TMLPTGVQMGLGARPAAVTMKLEQGALSDTGG 91
>gi|257457573|ref|ZP_05622740.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
35580]
gi|257444959|gb|EEV20035.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
35580]
Length = 271
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDIS 42
A+ N ++ ++++N+ANA T +Y+ +D++
Sbjct: 7 TAASGMNAQQKQLDVIAQNLANADTTSYK-RDVA 39
>gi|238755323|ref|ZP_04616666.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC
29473]
gi|238706459|gb|EEP98833.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC
29473]
Length = 251
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A E+Q + + N+ANASTP +RA+ +S+ + MA T + S
Sbjct: 7 TAMGAARQTLEQQAVTANNLANASTPGFRAQ-LSALRAVPIDGPSMAT--RTLVTASTPG 63
Query: 69 GLHWNAHVIEAPLDQTTGVQVSG 91
+ + +Q G
Sbjct: 64 ADMSQGPMNFSGRPLDVALQQDG 86
>gi|296127366|ref|YP_003634618.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
12563]
gi|296019182|gb|ADG72419.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
12563]
Length = 264
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA---RTHETHLKES 65
A+ N + + ++ N+AN +T Y+ K + FE ++ QN + T +T
Sbjct: 7 TAASGMNGMQFKTDTIANNLANVNTIGYK-KVRADFEDLIYQNLKIQGTPATEDTVRPVG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
+GL + + DQ +Q +GN + + E
Sbjct: 66 LQTGLGVKSASTQKMFDQ-GSLQATGNKLDLALE 98
>gi|148380595|ref|YP_001255136.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
3502]
gi|153933262|ref|YP_001384882.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
ATCC 19397]
gi|153935902|ref|YP_001388351.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
Hall]
gi|168180938|ref|ZP_02615602.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
gi|148290079|emb|CAL84198.1| putative flagellar basal-body rod protein [Clostridium botulinum A
str. ATCC 3502]
gi|152929306|gb|ABS34806.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
19397]
gi|152931816|gb|ABS37315.1| flagellar basal body rod protein [Clostridium botulinum A str.
Hall]
gi|182668229|gb|EDT80208.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
Length = 263
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S N+AN +T Y+ +D+ SF+ ++ + + T + +G A Q
Sbjct: 22 ISNNLANVNTVGYKREDV-SFQELVQETLKRKG-YPTSDRPEIQTGTGVKATNWIRDTHQ 79
Query: 84 TTGVQVSGNTVGI--TNE---LYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN + + Y YE + + N M+
Sbjct: 80 QGALLTTGNKTDLAIDGQGFFRVIMADGDYAYERSGNFLIDRNGML 125
>gi|320535379|ref|ZP_08035493.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
gi|320147781|gb|EFW39283.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
Length = 152
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 20/148 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST--------PNYRAKDI----------- 41
M + IA+ + R ++S+NIANAS+ P R++ I
Sbjct: 1 MGMFSSINIAATGMSAERLRTDVISDNIANASSTRTQEGEGPFKRSRVILSEKNPEVTWR 60
Query: 42 SSF-ETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNEL 100
+ F +++ + K++ S L ++ + +A V V I E+
Sbjct: 61 TPFVPDTIDKGVGTGVRVVSIEKDNAPSRLVYDPNHPDAIKSGPNAGYVEYPNVNIVTEM 120
Query: 101 YKSGHIKYLYELNTKLIKKLNSMVMHVV 128
YE N +I M +
Sbjct: 121 VDLISASRAYEANASVILGSKEMFQRAL 148
>gi|319944135|ref|ZP_08018413.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
gi|319742629|gb|EFV95038.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
Length = 417
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 57 THETHLKESDSSG----LHWNAHVIEAPLDQTTGVQVSG----NTVGITNELYKSGHIKY 108
T+ L+ + A ++ +P T GV SG + V +T EL +
Sbjct: 335 TNPQGLQPLGGNQWGETADSGAPLVGSPSTGTLGVIQSGALESSNVDLTQELVNMITAQR 394
Query: 109 LYELNTKLIKKLNSMVMHVV 128
+Y+ N + ++ + ++ +V
Sbjct: 395 VYQANAQTVRTHDQLLQTIV 414
>gi|321313186|ref|YP_004205473.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
gi|291486214|dbj|BAI87289.1| flagellar hook-basal body protein [Bacillus subtilis subsp. natto
BEST195]
gi|320019460|gb|ADV94446.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
Length = 269
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDI-------SSFETILNQNFLMARTHETH 61
AS N L ++ +S N++N++T Y+AKD F+ + +N +A+ +T
Sbjct: 7 TASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVAKARKTP 66
Query: 62 LKESDSSGLHWNAHVIEAP 80
G N+ ++
Sbjct: 67 PGLRLGVGAMMNSRLVSDQ 85
>gi|149173758|ref|ZP_01852387.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
gi|148847288|gb|EDL61622.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
Length = 274
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFE 45
+++Q A S R ++S N+ANA+T +++ +D+ F
Sbjct: 24 LSAQGAEANSVRLDVLSNNMANANTTSFK-RDVPIFR 59
>gi|78485810|ref|YP_391735.1| hypothetical protein Tcr_1469 [Thiomicrospira crunogena XCL-2]
gi|78364096|gb|ABB42061.1| Flagellar basal-body rod protein FlgG [Thiomicrospira crunogena
XCL-2]
Length = 263
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 3/104 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+A R +S N+ANA+T Y+ + F ++ QN T +E+
Sbjct: 7 VAKTGLEAQDFRLATISNNLANANTYAYKTGR-AEFNDLMYQNVRQPGAQATQNEENTFP 65
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
++A Q Q GN + N+L K ++
Sbjct: 66 SGLQLGTGVKAIGVQKIHTQ--GNAMVTDNQLDVMIEGKGFFQA 107
>gi|309788144|ref|ZP_07682750.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
gi|308923996|gb|EFP69497.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
Length = 111
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|254973936|ref|ZP_05270408.1| flagellar basal body rod protein FlgG [Clostridium difficile
QCD-66c26]
gi|255091322|ref|ZP_05320800.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
107932]
gi|255312980|ref|ZP_05354563.1| flagellar basal body rod protein FlgG [Clostridium difficile
QCD-76w55]
gi|255515739|ref|ZP_05383415.1| flagellar basal body rod protein FlgG [Clostridium difficile
QCD-97b34]
gi|255648833|ref|ZP_05395735.1| flagellar basal body rod protein FlgG [Clostridium difficile
QCD-37x79]
gi|260682050|ref|YP_003213335.1| flagellar basal body rod protein FlgG [Clostridium difficile
CD196]
gi|260685648|ref|YP_003216781.1| flagellar basal body rod protein FlgG [Clostridium difficile
R20291]
gi|260208213|emb|CBA60571.1| putative flagellar basal-body rod protein [Clostridium difficile
CD196]
gi|260211664|emb|CBE01933.1| putative flagellar basal-body rod protein [Clostridium difficile
R20291]
Length = 253
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLM--ARTHETHL 62
T F + + + I+S NIAN+ + Y+ ++ + ++++ T+ +
Sbjct: 3 TMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINME-YSDLVDEVLNRPSYPTNGNDI 61
Query: 63 KESDSSGLHWNAHVIE----APLDQTTGVQVSG 91
+ + E AP D + + + G
Sbjct: 62 STGTGAKATAPMRIYEQGALAPTDSKSNLAIDG 94
>gi|189426331|ref|YP_001953508.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
gi|189422590|gb|ACD96988.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
Length = 258
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+R ++S N+ANAST ++ +D +FE++L N + + S ++ +
Sbjct: 17 KRLDVISSNLANASTNGFK-QDRLAFESVLAGNR-----NPPAVPPSQTADPVLLQERML 70
Query: 79 APLDQTTGVQVSGNTVGI 96
T VQ GNT+ +
Sbjct: 71 TDYSAGTLVQT-GNTLDV 87
>gi|163939550|ref|YP_001644434.1| flagellar basal body rod protein FlgC [Bacillus weihenstephanensis
KBAB4]
gi|229132557|ref|ZP_04261406.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
gi|163861747|gb|ABY42806.1| flagellar basal-body rod protein FlgC [Bacillus weihenstephanensis
KBAB4]
gi|228650903|gb|EEL06889.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
Length = 137
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANASTPN------YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T Y + + +SF ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTGAPGAEPYHRRSVVLESNNSFASMLDG----APTNGVKIKSIETDR 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 NENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|157160605|ref|YP_001457923.1| flagellar basal body rod protein FlgG [Escherichia coli HS]
gi|170020526|ref|YP_001725480.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC
8739]
gi|312971215|ref|ZP_07785393.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
gi|157066285|gb|ABV05540.1| flagellar basal-body rod protein FlgG [Escherichia coli HS]
gi|169755454|gb|ACA78153.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC
8739]
gi|310336417|gb|EFQ01603.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
Length = 260
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST Y+ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGYKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|209963565|ref|YP_002296480.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum
SW]
gi|209957031|gb|ACI97667.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum
SW]
Length = 261
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S NIAN +T ++ + + F+ ++ Q + + +
Sbjct: 1 MRTLNIAATGMMAQQLNVEVISNNIANLNTVGFK-RSRAEFQDLMYQAQVRPGSESSDQD 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG 86
+G+ V A + + G
Sbjct: 60 TIVPAGIQLGLGVKPAAVSRMHG 82
>gi|167585194|ref|ZP_02377582.1| flagellar hook protein FlgE [Burkholderia ubonensis Bu]
Length = 269
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + SS +
Sbjct: 19 VIGNNIANANTVGFKSST-AQFADMYANSVATSVNTQIGIGTRISSVQQSFGQGTINTTN 77
Query: 83 QTTGVQVSGN 92
V ++GN
Sbjct: 78 NALDVAINGN 87
>gi|46579854|ref|YP_010662.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602680|ref|YP_967080.1| hypothetical protein Dvul_1636 [Desulfovibrio vulgaris DP4]
gi|46449270|gb|AAS95921.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562909|gb|ABM28653.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
vulgaris DP4]
gi|311234145|gb|ADP86999.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
Length = 564
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
ER ++ NIAN +T ++ + FE LNQ+ A
Sbjct: 17 HGERMNVLGNNIANVNTVGFKGSRM-DFEDFLNQDTYSAA 55
>gi|99082800|ref|YP_614954.1| flagellar basal body rod protein FlgG [Ruegeria sp. TM1040]
gi|99039080|gb|ABF65692.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
Length = 261
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +IA+ + R + +S N+AN +T Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARR-AEFADLHYQQISRAGTVNASDG 59
Query: 64 ESDSSGLHWNAHVIEAPLD---QTTGVQVSGNTVGI 96
+G+ V A + + +GN + +
Sbjct: 60 TVLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDL 95
>gi|313620054|gb|EFR91569.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL S4-378]
Length = 121
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 8 QIASQHANWLSERQKIVSENIANAS-------TPNYRAK----DISSFETILNQNFLMAR 56
+ N + ++ S NIANA TP R + +I+ FET L +
Sbjct: 6 NTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKRVVLSEITPFETALTGTKGVKV 65
Query: 57 THETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKL 116
+ + SD+ + ++ V + V +T E+ + +Y NT
Sbjct: 66 SEIS----SDTGSVKRVYDPTHPNANEAGYVNYA--NVDMTAEMTNLMVGQKMYAANTSA 119
Query: 117 IK 118
++
Sbjct: 120 LQ 121
>gi|157738176|ref|YP_001490860.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
gi|157700030|gb|ABV68190.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
Length = 262
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--LMARTHETHLKESD 66
A+ N + + + S NIAN +T ++ KD + F+ ++ ++ RT +T L +
Sbjct: 7 TAATGMNAMQHQIDVTSNNIANVNTTGFK-KDRAEFQDLMYESLNYTAGRTTQTTLNPTG 65
>gi|119899027|ref|YP_934240.1| FlgE protein [Azoarcus sp. BH72]
gi|119671440|emb|CAL95353.1| FlgE protein [Azoarcus sp. BH72]
Length = 445
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH-ETHLKES 65
FQ N S+ ++S N+ANAST ++A + + F + + + +
Sbjct: 3 FQQGLSGLNSSSKALDVISNNVANASTVGFKASN-TIFADMYASAMTGGTSSLQVGIGSK 61
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ + + ++GN
Sbjct: 62 VAAVTQSFTQGNLTATNNPLDMAINGN 88
>gi|114570497|ref|YP_757177.1| flagellar basal body rod protein FlgG [Maricaulis maris MCS10]
gi|114340959|gb|ABI66239.1| flagellar basal-body rod protein FlgG [Maricaulis maris MCS10]
Length = 261
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ A+ +++S N+AN +T ++ + + F+ +L QN +
Sbjct: 1 MRALTTAATGMQAQQLNVEVISNNLANMNTTGFKRQR-AEFQDLLYQNVQQMGAASSDAG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNT 93
+G+ V A + + T NT
Sbjct: 60 TIVPTGVQVGLGVQTASIYRITEQGALSNT 89
>gi|240137460|ref|YP_002961931.1| putative flagellar hook-associated protein 1 FlgK
[Methylobacterium extorquens AM1]
gi|240007428|gb|ACS38654.1| putative flagellar hook-associated protein 1 FlgK
[Methylobacterium extorquens AM1]
Length = 632
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ F A+ + +VS+NIAN T Y + ++ + + T L
Sbjct: 3 LDAFSTATAGLRVTQAQIGVVSQNIANVGTAGYVRRTLAPITSGSGNAGVATGTVARALD 62
Query: 64 ESD 66
+
Sbjct: 63 AAA 65
>gi|313650472|gb|EFS14879.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str.
2457T]
gi|323165585|gb|EFZ51372.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G]
gi|332758236|gb|EGJ88559.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70]
gi|332759657|gb|EGJ89962.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71]
gi|332761422|gb|EGJ91706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671]
gi|332767684|gb|EGJ97877.1| flagella basal body rod family protein [Shigella flexneri
2930-71]
gi|333004886|gb|EGK24406.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6]
gi|333005551|gb|EGK25069.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218]
gi|333008279|gb|EGK27753.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272]
gi|333019416|gb|EGK38699.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304]
gi|333019769|gb|EGK39041.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227]
Length = 111
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|326404070|ref|YP_004284152.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
AIU301]
gi|325050932|dbj|BAJ81270.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
AIU301]
Length = 247
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+++ NIAN STP Y + ++S + + + A + L + S+G + +
Sbjct: 21 VIANNIANVSTPGYESMHLASTTWLDHMRNVTAPPGGSTLAYTQSNGTWRD--------E 72
Query: 83 QTTGVQVSGNTVGI 96
+ ++ +GN + +
Sbjct: 73 RPGAIRNTGNALDL 86
>gi|308273521|emb|CBX30123.1| hypothetical protein N47_D29320 [uncultured Desulfobacterium sp.]
Length = 469
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
N L ++ +NIAN +T ++ ++ F+ +L+Q A T + +S
Sbjct: 2 SGLNALGNAMTVIGDNIANVNTVGFKESRVT-FQDVLSQTV--ATTAGSAQVGRGTSLAD 58
Query: 72 WNAHVIEAPLDQT 84
++ + + T
Sbjct: 59 ISSSFSQGSFEST 71
>gi|170747377|ref|YP_001753637.1| flagellar basal body rod protein FlgC [Methylobacterium
radiotolerans JCM 2831]
gi|170653899|gb|ACB22954.1| flagellar basal body rod protein FlgC [Methylobacterium
radiotolerans JCM 2831]
Length = 136
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 14/105 (13%)
Query: 18 SERQKIVSENIANAS----TPN---YRAKDISSFETILNQNFLMARTHETHLKESDSSGL 70
S R + +SEN+ANA TP Y A+ I+ F + + D++G
Sbjct: 22 SGRIRAISENLANADSVPTTPGGAPY-ARKIAVFAPVAADSPR----DPVGRIARDTTGF 76
Query: 71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTK 115
D + V++ V E + YEL+
Sbjct: 77 RTRYDPTSPGADPSGYVRLP--NVNSAVESADLQRVVRNYELSLS 119
>gi|121596119|ref|YP_988015.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
gi|222112274|ref|YP_002554538.1| flagellar basal-body rod protein flgg [Acidovorax ebreus TPSY]
gi|120608199|gb|ABM43939.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
gi|221731718|gb|ACM34538.1| flagellar basal-body rod protein FlgG [Acidovorax ebreus TPSY]
Length = 260
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA + ++S N+AN ST ++ ++ + FE ++ QN + T
Sbjct: 2 MNSLWIAKTGMTAQQTQLDVISHNLANVSTTGFK-RNNAVFEDLIYQNLRQVGSQTTEEN 60
Query: 64 ESDSSGLHWNAHVIEAPLDQTT---GVQVSGNTVGI 96
+ + GLH V + +Q SGN++ +
Sbjct: 61 QLPT-GLHLGLGVNVVATSRNFTQGSLQQSGNSLDV 95
>gi|320536024|ref|ZP_08036083.1| putative flagellar basal-body rod protein FlgF [Treponema
phagedenis F0421]
gi|320147123|gb|EFW38680.1| putative flagellar basal-body rod protein FlgF [Treponema
phagedenis F0421]
Length = 271
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 65 SDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ SG A + P+ ++ S V + NE+ + + YE N K I+ ++M+
Sbjct: 203 TPVSGPAIAAEGPDRPVTVQGFIEAS--NVNVVNEMVRMIEVNRAYEANQKTIQSEDTMM 260
>gi|320537132|ref|ZP_08037104.1| flagellar basal-body rod protein FlgG [Treponema phagedenis
F0421]
gi|320146005|gb|EFW37649.1| flagellar basal-body rod protein FlgG [Treponema phagedenis
F0421]
Length = 264
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART-------HETH 61
A+ N V+ N+AN +T ++ K + FE +L Q A T
Sbjct: 7 TAASGMNSQQANIDTVANNLANVNTSGFK-KQRAEFEDLLYQTVKSAGTPATEDTITPVG 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ S L + E Q TG+
Sbjct: 66 IQMGHGSKLAATQRIFEQGALQHTGLTSD 94
>gi|296283228|ref|ZP_06861226.1| flagellar basal body rod protein FlgG [Citromicrobium
bathyomarinum JL354]
Length = 261
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA ++S NIAN +T ++ + + F+ +L Q +
Sbjct: 1 MRSLSIAGTGMLAQQTNVDVISNNIANMNTTGFKRQR-AQFQDLLYQQVSRPGASSAGPE 59
Query: 64 ESDSSGLHWNAHVIE 78
+G+ A V
Sbjct: 60 ARAPTGIQIGAGVRT 74
>gi|253574271|ref|ZP_04851613.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846748|gb|EES74754.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 300
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ R V++NIAN +TP Y++
Sbjct: 7 TAASGMIAEQRRHDTVTQNIANLNTPGYKS 36
>gi|190890363|ref|YP_001976905.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
gi|218516082|ref|ZP_03512922.1| flagellar basal body rod protein FlgG [Rhizobium etli 8C-3]
gi|190695642|gb|ACE89727.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
Length = 262
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFK-RARAEFTDLLYQTERAKGVANRANQ 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
G + V + L + +GN + +
Sbjct: 60 AVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDV 95
>gi|209547928|ref|YP_002279845.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209533684|gb|ACI53619.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 262
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFK-RARAEFSDLLYQTERAKGVANRANQ 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
G + V + L + +GN + +
Sbjct: 60 AVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDV 95
>gi|170744541|ref|YP_001773196.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
gi|168198815|gb|ACA20762.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
Length = 242
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDS---SGLHWN 73
L +R V+ NIAN +T YRA++ + FE + ++ ART + S L
Sbjct: 15 LQKRLDTVANNIANLATVGYRAEE-TKFEAVFDK----ARTGPVAFASTGDTYISRLAGP 69
Query: 74 AHVIEAPLD 82
+APLD
Sbjct: 70 TIKTDAPLD 78
>gi|150395485|ref|YP_001325952.1| flagellar basal body rod protein FlgG [Sinorhizobium medicae
WSM419]
gi|150027000|gb|ABR59117.1| flagellar basal-body rod protein FlgG [Sinorhizobium medicae
WSM419]
Length = 262
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+ IA+ N ++++ NIAN +T Y+ + + F +L Q
Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYK-RARAEFSDLLYQT 47
>gi|27378285|ref|NP_769814.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
110]
gi|27351432|dbj|BAC48439.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
110]
Length = 149
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 20/137 (14%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL- 62
++ F IA+ + S R + + NIAN ST S + + + T
Sbjct: 1 MSIFSIATSGLSAASLRVSVAASNIANISTTGPLPASGGSSTSAGAGSSGIGPTFPAAYV 60
Query: 63 -----KESDSSGLHWNAHVIEAPLDQTTGVQVSG------N--------TVGITNELYKS 103
+ S SSG V + + S N V + E +
Sbjct: 61 PLRVDQVSQSSGSTPGGSVATVSAVSPSYIAQSDPSAPFANEDGLVAAPNVDLAGEFVEL 120
Query: 104 GHIKYLYELNTKLIKKL 120
KY + N K+I+
Sbjct: 121 VTAKYSFIANAKVIQAY 137
>gi|331007439|ref|ZP_08330616.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
IMCC1989]
gi|330418746|gb|EGG93235.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
IMCC1989]
Length = 261
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%)
Query: 50 QNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ ++ +SG E+ L + + V I E+ +
Sbjct: 180 NPAGLQALGGNVFAQTAASGDPQTGTAGESGLGSIIQGSLENSNVDIVEEMVNMITTQRA 239
Query: 110 YELNTKLIKKLNSMVM 125
YE+N+K++ + M+
Sbjct: 240 YEMNSKVVSTADQMLQ 255
>gi|297538896|ref|YP_003674665.1| fagellar hook-basal body protein [Methylotenera sp. 301]
gi|297258243|gb|ADI30088.1| fagellar hook-basal body protein [Methylotenera sp. 301]
Length = 422
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S++ +++ N+ANA+T ++ + + F + + + + +
Sbjct: 3 FQQGLSGLNAASKQLEVIGNNVANANTVGFK-QSRAEFADVFANSLTGGGGTQIGIGTNL 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG 91
S+ + + + ++G
Sbjct: 62 STVAQQFTQGNVTSTNNSLDIAING 86
>gi|218778520|ref|YP_002429838.1| flagellar basal-body rod protein FlgC [Desulfatibacillum
alkenivorans AK-01]
gi|218759904|gb|ACL02370.1| Flagellar basal-body rod protein FlgC [Desulfatibacillum
alkenivorans AK-01]
Length = 142
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 14/140 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAK--DISSFETILNQNF 52
M + ++ + + +VSEN+ANA+T Y+ K +S ++N
Sbjct: 1 MDLLNAMHASASALSVSRAQMNVVSENLANANTTRTANGQPYQRKFLVVSPAPVKEHENL 60
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKY 108
+ +K D ++ P +GN V + E+ K
Sbjct: 61 SVGEQVVEGVKLVDIVADQSPFPMVYRPEHPDA--DENGNLQLPNVNVVTEMANMLMAKR 118
Query: 109 LYELNTKLIKKLNSMVMHVV 128
+Y+ N + SM + +
Sbjct: 119 VYDSNAAALSTARSMALKAL 138
>gi|269836573|ref|YP_003318801.1| hypothetical protein Sthe_0541 [Sphaerobacter thermophilus DSM
20745]
gi|269785836|gb|ACZ37979.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
thermophilus DSM 20745]
Length = 413
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIAN +TP ++A + FE +++ A + + V+ A +D
Sbjct: 22 VIGNNIANLATPGFKASRVR-FEDVMSHTLRGASVPDPAQGRGGRNPAQVGLGVLAAGID 80
Query: 83 QTTGV 87
Sbjct: 81 TDYAP 85
>gi|227820858|ref|YP_002824828.1| flagellar basal body rod protein FlgG [Sinorhizobium fredii
NGR234]
gi|227339857|gb|ACP24075.1| flagellar basal-body rod protein FlgG [Sinorhizobium fredii
NGR234]
Length = 262
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+ IA+ N ++++ NIAN +T Y+ + + F +L Q
Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYK-RARAEFSDLLYQT 47
>gi|302383956|ref|YP_003819779.1| flagellar basal-body rod protein FlgG [Brevundimonas
subvibrioides ATCC 15264]
gi|302194584|gb|ADL02156.1| flagellar basal-body rod protein FlgG [Brevundimonas
subvibrioides ATCC 15264]
Length = 262
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ +++S NIAN +T Y+ + + F+ ++ QN +
Sbjct: 1 MRALRTAASGMAAQQLNVEVISNNIANMNTVGYKRQR-AEFQDLIYQNVERMGAQSSSQG 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTTG 86
+G+ V + + T
Sbjct: 60 TVVPTGIQVGLGVKAGSVYRITE 82
>gi|170742312|ref|YP_001770967.1| flagellar basal body FlaE domain-containing protein
[Methylobacterium sp. 4-46]
gi|168196586|gb|ACA18533.1| flagellar basal body FlaE domain protein [Methylobacterium sp.
4-46]
Length = 456
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + Q A + +S NIANA T YR D ++F +L + +T +
Sbjct: 1 MDVFSAMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRID-TTFADLLAEQPNDRQTSGS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ SS A TT + ++G
Sbjct: 60 ---VAASSQFTNTLQGNIASTGITTNMALNG 87
>gi|16760054|ref|NP_455671.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142175|ref|NP_805517.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161843|ref|ZP_03347553.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213424681|ref|ZP_03357446.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582038|ref|ZP_03363864.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213613180|ref|ZP_03371006.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648927|ref|ZP_03378980.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865504|ref|ZP_03387623.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289828579|ref|ZP_06546404.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25298925|pir||AC0640 probable flagellar basal-body rod protein FlgF (proximal rod
protein) STY1217 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502348|emb|CAD08302.1| putative flagellar basal-body rod protein FlgF (proximal rod
protein) [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137805|gb|AAO69366.1| putative flagellar basal-body rod protein FlgF [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 251
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q + + N+ANASTP +RA+ +++ + +A T + S +
Sbjct: 19 QAVTASNLANASTPGFRAQ-LNALRAVPVDGLSLAT--RTLVTASTPGADMTQGQLDYTS 75
Query: 81 LDQTTGVQVSG 91
+Q G
Sbjct: 76 RPLDVALQQDG 86
>gi|255099395|ref|ZP_05328372.1| putative flagellar hook-associated protein [Clostridium difficile
QCD-63q42]
gi|255305252|ref|ZP_05349424.1| putative flagellar hook-associated protein [Clostridium difficile
ATCC 43255]
Length = 436
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + VSG V + E+ + I+ Y+ + K++ ++ V+ G
Sbjct: 389 DNSRMSVSG--VSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVING 434
>gi|315121852|ref|YP_004062341.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495254|gb|ADR51853.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 243
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILN 49
F I L +R V++NI+N++T +RA + F ++N
Sbjct: 5 FNIGLSAQIALEKRLSTVADNISNSNTSGFRAIKVK-FSEVIN 46
>gi|296447438|ref|ZP_06889363.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
OB3b]
gi|296255058|gb|EFH02160.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
OB3b]
Length = 262
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ N + +++S NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMNAQQQNIEVISNNIANINTTAFK-RSRAEFTDLLYQADRLQGVSNRGRD 59
Query: 64 ESDSSGLHWNAHVIEA---PLDQTTGVQVSGNTVGI 96
+ G V L + +GN + +
Sbjct: 60 ATVPEGAQTGLGVRLTAIRSLQTQGSLAQTGNQLDL 95
>gi|303326604|ref|ZP_07357046.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
gi|302862592|gb|EFL85524.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
Length = 146
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 13/141 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFL- 53
M +T I + R +S N+ANA T YR + + T ++ F
Sbjct: 1 MDFLTALDIGASGLTADRTRINTISMNLANAKTTRTPQGGPYRRRTVVQAATDVDDPFSV 60
Query: 54 -MARTHETHLKE----SDSSGLHWNAHVIEAP-LDQTTGVQVSGNTVGITNELYKSGHIK 107
M + LK + + V E D VS + + E+ +
Sbjct: 61 HMRSALDRELKGVRVMAVTMDKRPLKQVYEPGHPDANAEGYVSYPDINVVEEMANLMSAQ 120
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
YE N ++ + M +
Sbjct: 121 RNYEANVTTVEAIKGMYNKAL 141
>gi|296534160|ref|ZP_06896654.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
49957]
gi|296265515|gb|EFH11646.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
49957]
Length = 262
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA +++S NIAN ST Y+ + + F+ +L +N + +
Sbjct: 1 MRSLNIAGTGMMAQQTNVEVISNNIANMSTTAYKRRR-AEFQDLLYENLRRTGSQSSDQG 59
Query: 64 ESDSSGLHWNAHVIEAPL 81
SG V A +
Sbjct: 60 TVLPSGAQLGLGVRTAAI 77
>gi|296452609|ref|ZP_06894303.1| flagellar hook-associated protein FlgK [Clostridium difficile
NAP08]
gi|296880979|ref|ZP_06904925.1| flagellar hook-associated protein FlgK [Clostridium difficile
NAP07]
gi|296258570|gb|EFH05471.1| flagellar hook-associated protein FlgK [Clostridium difficile
NAP08]
gi|296428000|gb|EFH13901.1| flagellar hook-associated protein FlgK [Clostridium difficile
NAP07]
Length = 436
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + VSG V + E+ + I+ Y+ + K++ ++ V+ G
Sbjct: 389 DNSRMSVSG--VSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVING 434
>gi|225181620|ref|ZP_03735061.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
AHT 1]
gi|225167728|gb|EEG76538.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
AHT 1]
Length = 494
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 5 TFFQIASQHANWLSERQ--KIVSENIANASTPNY 36
TFF + ++++ ++ + N+ANA+TP Y
Sbjct: 3 TFFGLNISRLGMQAQQKALEVTAHNVANANTPGY 36
>gi|315649859|ref|ZP_07902942.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
gi|315274833|gb|EFU38214.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
Length = 281
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 18 SERQKIVSENIANASTPNYRA 38
+R V++NIAN +T Y+A
Sbjct: 4 EQRHNTVTQNIANVNTAGYKA 24
>gi|308071138|ref|YP_003872743.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
gi|305860417|gb|ADM72205.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
Length = 275
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+R ++++NIAN +T Y++K SFE +L T
Sbjct: 16 QQRLDLIADNIANINTVGYKSKQ-GSFEDVLANVQQQPST 54
>gi|168783607|ref|ZP_02808614.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4076]
gi|188999091|gb|EDU68077.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4076]
Length = 251
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|161621182|ref|YP_001595068.1| flagellar hook protein FlgE [Brucella canis ATCC 23365]
gi|254702383|ref|ZP_05164211.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
gi|260568714|ref|ZP_05839183.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
gi|261752946|ref|ZP_05996655.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
gi|161337993|gb|ABX64297.1| flagellar basal body FlaE domain protein [Brucella canis ATCC
23365]
gi|260155379|gb|EEW90460.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
gi|261742699|gb|EEY30625.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
Length = 396
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART--- 57
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60
Query: 58 -HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ H SD G+ + + +D V G
Sbjct: 61 LTDVHYGISDQGGIRSTSSTTDLAIDGNGYFVVQG 95
>gi|39933725|ref|NP_946001.1| flagellar hook-associated protein 1 FlgK [Rhodopseudomonas
palustris CGA009]
gi|39647572|emb|CAE26092.1| possible flagellar hook-associated protein 1 (HAP1, FlgK protein)
[Rhodopseudomonas palustris CGA009]
Length = 587
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 24/62 (38%)
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMH 126
+S EA S + V + E + ++ Y ++LI+ +N+M
Sbjct: 520 ASQASSTYSAKEAAQSTYANSLSSQSGVNLDEESARLSELQNKYTAASQLIQAINAMFTA 579
Query: 127 VV 128
+V
Sbjct: 580 LV 581
>gi|254470088|ref|ZP_05083492.1| flagellar hook protein [Pseudovibrio sp. JE062]
gi|211960399|gb|EEA95595.1| flagellar hook protein [Pseudovibrio sp. JE062]
Length = 561
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M A+ + S+ + +S N+AN+ST Y+ D +SF +++ +
Sbjct: 1 MSIYGAINSATTGLDAQSKALENISGNVANSSTTGYKRLD-TSFSDLVSSTGSRQAEQVS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ S ++ + I + D+ T + ++G
Sbjct: 60 GTVIATSRATNYLSGDITSA-DRNTYMAING 89
>gi|110632656|ref|YP_672864.1| flagellar basal body rod protein FlgG [Mesorhizobium sp. BNC1]
gi|110283640|gb|ABG61699.1| flagellar basal-body rod protein FlgG [Chelativorans sp. BNC1]
Length = 262
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T ++ + + F +L Q + E +
Sbjct: 1 MKALSIAATGMSAQQTNLEVIANNIANINTTGFK-RARAEFSDLLYQVERLQGVPERANQ 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTT---GVQVSGNTVGI 96
G + V A + + +GN + +
Sbjct: 60 NIVPEGANIGLGVKTAAVRNVHVQGSLTNTGNKLDM 95
>gi|300716219|ref|YP_003741022.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
gi|299062055|emb|CAX59171.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
Length = 251
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 19 ERQKIVSENIANASTPNYRAK 39
E+Q + + N+ANASTP +RA+
Sbjct: 17 EQQAVTASNLANASTPGFRAQ 37
>gi|197122873|ref|YP_002134824.1| hypothetical protein AnaeK_2470 [Anaeromyxobacter sp. K]
gi|196172722|gb|ACG73695.1| protein of unknown function DUF1078 domain protein
[Anaeromyxobacter sp. K]
Length = 428
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M +T + S +V +NIANA+T +++ ++FE L+Q+ + T +
Sbjct: 1 MSLLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGR-AAFEDALSQSV-IGGTGQI 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + A T + + GN
Sbjct: 59 GLGSRLAGVQKILTQGALASTGLATDLALQGN 90
>gi|23099019|ref|NP_692485.1| flagellar basal body rod protein FlgG [Oceanobacillus iheyensis
HTE831]
gi|22777247|dbj|BAC13520.1| flagellar hook-basal body protein [Oceanobacillus iheyensis
HTE831]
Length = 285
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T Y+ K + +F+ +++Q A+ + ++S +
Sbjct: 10 SGMKNSQTKLDVIGNNIANVNTVGYK-KSMVNFQDMMSQTTSGAQGSTANRGGVNASQVG 68
Query: 72 WNAHVIEAPLDQTTGVQVSGNT 93
+ + T G Q N
Sbjct: 69 LGSTIGAISNIHTQGFQQVTNN 90
>gi|150019058|ref|YP_001311312.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
NCIMB 8052]
gi|149905523|gb|ABR36356.1| protein of unknown function DUF1078 domain protein [Clostridium
beijerinckii NCIMB 8052]
Length = 255
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKE 64
F A N E+ +S ++ N ST Y++ D+ +F+ +L ++ T K
Sbjct: 3 NIFATAKSGMNAYQEKLDYLSNDLVNISTTGYKSTDV-NFKDLLTESLDRRGTPLVEKKA 61
Query: 65 SDSSGLHWNAH 75
+G+ +
Sbjct: 62 ITGTGVKLGVN 72
>gi|300854206|ref|YP_003779190.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
13528]
gi|300434321|gb|ADK14088.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
13528]
Length = 143
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 16/121 (13%)
Query: 21 QKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETHLKES-------DS 67
++ N+ANA T YR + ++ F L++ + + D+
Sbjct: 22 MDTIASNMANAETTRGADGQPYR-RKVAVFGENLSKALDSNGNYGDVPEGVKVVAIKDDT 80
Query: 68 SGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
S D + V + V I NE+ YE N I SM
Sbjct: 81 SPFKREYDPTNPDADASGYVSMP--NVNILNEMADMMVATRAYEANLSAINSEKSMFSKA 138
Query: 128 V 128
+
Sbjct: 139 L 139
>gi|119503644|ref|ZP_01625727.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
gi|119460706|gb|EAW41798.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
Length = 410
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A ++S NIANAST ++A + F I + ++ ++
Sbjct: 3 FSTAISGIKAAQANLDVISNNIANASTVGFKASR-AQFAEIYASSVSGGSNAGQGVELTE 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + +G
Sbjct: 62 IRAEFSQGSLDFTGSGLDLAISGNG 86
>gi|114706758|ref|ZP_01439658.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
gi|114537706|gb|EAU40830.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
Length = 240
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
+ +R + ++ NIANA T +RA+++ FE +L+
Sbjct: 15 MEKRLETLAHNIANARTVGFRAEEVR-FEELLSHTA 49
>gi|229043498|ref|ZP_04191208.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
gi|229144356|ref|ZP_04272762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
gi|296502344|ref|YP_003664044.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
BMB171]
gi|228639143|gb|EEK95567.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
gi|228725876|gb|EEL77123.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
gi|296323396|gb|ADH06324.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
BMB171]
Length = 137
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGTDLYERRSVVLESNNSFASMLDG----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|268589981|ref|ZP_06124202.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
1131]
gi|291314699|gb|EFE55152.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
1131]
Length = 251
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK 39
A A E Q IVS NIAN ST ++A+
Sbjct: 7 TAMGGARHALENQAIVSNNIANVSTAGFKAQ 37
>gi|148256818|ref|YP_001241403.1| putative flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
gi|146408991|gb|ABQ37497.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
Length = 601
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S NIANAST Y+ +SFE ++ R + + + + V + +
Sbjct: 24 ISGNIANASTVGYKGIG-TSFEDLIPNATNPTRQNAGGVTAFAKATITTQGTVSTSSVAT 82
Query: 84 TTGVQVSG 91
+ G
Sbjct: 83 NMAINGDG 90
>gi|221311596|ref|ZP_03593443.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315923|ref|ZP_03597728.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320836|ref|ZP_03602130.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
subtilis str. JH642]
gi|1763701|emb|CAB05941.1| flhP [Bacillus subtilis subsp. subtilis str. 168]
Length = 268
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDI-------SSFETILNQNFLMARTHETH 61
AS N L ++ +S N++N++T Y+AKD F+ + +N +A+ +T
Sbjct: 7 TASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVAKARKTP 66
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + V + Q T +
Sbjct: 67 PLAPLVGAMMSSRLVSDQGSIQKTDRDLD 95
>gi|307131609|ref|YP_003883625.1| flagellar hook protein flgE [Dickeya dadantii 3937]
gi|306529138|gb|ADM99068.1| Flagellar hook protein flgE [Dickeya dadantii 3937]
Length = 399
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A N S ++ NIAN++T ++A +I SF + + + T + +
Sbjct: 3 FSQAVSGLNAASNNLDVIGNNIANSATVGFKASNI-SFADMYAGSNVGLGTRVASVLQDF 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S+G ++ V ++GN
Sbjct: 62 SNGSI-------TSTSRSLDVAINGN 80
>gi|254504490|ref|ZP_05116641.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
gi|222440561|gb|EEE47240.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
Length = 246
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 14/122 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M+ + ++ Q A L + +V+ N+AN +T ++++ + FE L M T
Sbjct: 1 MENVHLIGLSRQSA--LRNQLDVVANNMANINTTGFKSQRLL-FEEYL-----MPVAEAT 52
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE-----LYKSGHIKYLYELNTK 115
+ D + + + D T +++GN + + E + + G Y +
Sbjct: 53 EFQTPDETLSYVLDYQSITDFD-TGAFKMTGNDLDLAIEGEGFFVVQMGDGTEAYTRDGA 111
Query: 116 LI 117
+
Sbjct: 112 FV 113
>gi|197120124|ref|YP_002140551.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis
Bem]
gi|197089484|gb|ACH40755.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis
Bem]
Length = 238
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
R ++S N+AN++T ++A D FE++L +
Sbjct: 15 AQRRLDVISNNLANSNTSGFKA-DQIQFESVLANVKNPTQQAP 56
>gi|126730134|ref|ZP_01745946.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
gi|126709514|gb|EBA08568.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
Length = 261
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ +IA+ + R +++S N++N ST Y A+ + F + Q A T +
Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARR-AEFADLHYQQMARAGTVNASNG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN-TVGIT 97
T L GL + L Q G+ V I
Sbjct: 60 TVLPTGIQLGLGVRPAAVSVQLSQGALSATGGDLDVAIE 98
>gi|148258452|ref|YP_001243037.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
sp. BTAi1]
gi|146410625|gb|ABQ39131.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
sp. BTAi1]
Length = 246
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILN 49
L R + + N+AN+ T YRAK ++ F+ L
Sbjct: 11 SRLMALQRRLDVAANNVANSQTTGYRAKQLA-FQEYLK 47
>gi|206603526|gb|EDZ40006.1| Putative flagellar basal body rod protein [Leptospirillum sp.
Group II '5-way CG']
Length = 267
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
F + S A + +++ N+AN +TP ++ +D +F T L
Sbjct: 6 FALVS-GAQAQEQLMDVLTNNLANVNTPGFK-RDRVTFRTYL 45
>gi|163758015|ref|ZP_02165103.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
gi|162284304|gb|EDQ34587.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
Length = 262
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ N ++++ N+AN +T ++ + + F +L Q +
Sbjct: 1 MKALAIAATGMNAQQLNLEVIANNVANINTTGFK-RARAEFADLLYQVERNQGVPNASNQ 59
Query: 64 ESDSSGLHWNAHVIEAPLD 82
G H V + +
Sbjct: 60 AIVPEGAHIGLGVQTSAVR 78
>gi|150020229|ref|YP_001305583.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
BI429]
gi|149792750|gb|ABR30198.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
BI429]
Length = 846
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
+VS NIANA+TP + + + T + + + + I
Sbjct: 24 MNVVSHNIANANTPGFSRQ--VPIIRTMPPIPATTLTQPSVPLQIGTGSKVKDIKRIRDQ 81
Query: 81 LDQTTGVQVS 90
QV+
Sbjct: 82 FLDIQYRQVN 91
>gi|327192294|gb|EGE59259.1| flagellar hook protein FlgE [Rhizobium etli CNPAF512]
Length = 483
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA 38
M + A + + R VS+NIANA+T Y+A
Sbjct: 54 MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKA 91
>gi|260426515|ref|ZP_05780494.1| aminotransferase [Citreicella sp. SE45]
gi|260421007|gb|EEX14258.1| aminotransferase [Citreicella sp. SE45]
Length = 287
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 26 ENIANASTPN-YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE-APLDQ 83
N+A ++T N + A+D F I N FL T H+ + G+ + V+ A +
Sbjct: 183 GNVAESATANIFMARDGELFTPIANGTFLSGITRARHIANFRADGVKVHEAVLTYADFEA 242
Query: 84 TTGVQVSGN 92
V +SGN
Sbjct: 243 ADEVFLSGN 251
>gi|254437430|ref|ZP_05050924.1| conserved domain protein [Octadecabacter antarcticus 307]
gi|198252876|gb|EDY77190.1| conserved domain protein [Octadecabacter antarcticus 307]
Length = 1436
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 5 TFFQIASQHANWLSERQK--IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
+ F+I N ++RQ + +NI NA+T YR +D + E Q+ L + T + L
Sbjct: 3 SLFEIGRSAIN--AQRQALNVTGQNIVNANTEGYRRRDANLTEVFGVQSELNSMTSQVGL 60
Query: 63 K 63
Sbjct: 61 G 61
>gi|78067837|ref|YP_370606.1| flagellar hook protein FlgE [Burkholderia sp. 383]
gi|77968582|gb|ABB09962.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 413
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
++ NIANA+T +++ + F + + + + + S ++
Sbjct: 19 VIGNNIANANTVGFKSST-AQFADMYANSVATSTNTQIGIGTSLNAVQQNFGQGTINTTS 77
Query: 83 QTTGVQVSGN 92
+ V ++GN
Sbjct: 78 SSLDVAINGN 87
>gi|15616183|ref|NP_244488.1| flagellar hook-associated protein FlgK [Bacillus halodurans
C-125]
gi|10176245|dbj|BAB07340.1| flagellar hook-associated protein 1 (HAP1) [Bacillus halodurans
C-125]
Length = 556
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
+ A + + V NIANA+TP Y + ++ +T R + +
Sbjct: 9 LETARRGMMTQQAALRTVGHNIANANTPGYTRQRVNFVQTQAYPGV--GRNAPSIPGQVG 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVS 90
+ + + I Q +
Sbjct: 67 TGVMAGSIQRIRDAFLDLQYRQHN 90
>gi|328958264|ref|YP_004375650.1| putative flagellar basal-body rod protein [Carnobacterium sp.
17-4]
gi|328674588|gb|AEB30634.1| putative flagellar basal-body rod protein [Carnobacterium sp.
17-4]
Length = 252
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 15 NWLSERQKIVSENIANASTPNYRAKDI 41
N L ++Q+ +S N+AN +T Y++++I
Sbjct: 13 NILQKKQENISANVANINTSGYKSQEI 39
>gi|323705438|ref|ZP_08117013.1| fagellar hook-basal body protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535340|gb|EGB25116.1| fagellar hook-basal body protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 424
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 11/82 (13%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI--- 77
++ NIAN +T ++A ++ F+ I NQ A + + ++ + +
Sbjct: 19 MDVIGNNIANVNTVGFKASRMT-FKEIFNQTIKGASAPQDNGGGTNPQQIGLGVAIASID 77
Query: 78 -------EAPLDQTTGVQVSGN 92
D T + + GN
Sbjct: 78 TLFSNGGSQRTDNPTDLSIDGN 99
>gi|254973892|ref|ZP_05270364.1| putative flagellar hook-associated protein [Clostridium difficile
QCD-66c26]
gi|255091277|ref|ZP_05320755.1| putative flagellar hook-associated protein [Clostridium difficile
CIP 107932]
gi|255312936|ref|ZP_05354519.1| putative flagellar hook-associated protein [Clostridium difficile
QCD-76w55]
gi|255515695|ref|ZP_05383371.1| putative flagellar hook-associated protein [Clostridium difficile
QCD-97b34]
gi|255648789|ref|ZP_05395691.1| putative flagellar hook-associated protein [Clostridium difficile
QCD-37x79]
gi|260682009|ref|YP_003213294.1| putative flagellar hook-associated protein [Clostridium difficile
CD196]
gi|260685607|ref|YP_003216740.1| putative flagellar hook-associated protein [Clostridium difficile
R20291]
gi|260208172|emb|CBA60493.1| putative flagellar hook-associated protein [Clostridium difficile
CD196]
gi|260211623|emb|CBE01861.1| putative flagellar hook-associated protein [Clostridium difficile
R20291]
Length = 436
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ + VSG V + E+ + I+ Y+ + K++ ++ V+ G
Sbjct: 389 DNSRMSVSG--VSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVING 434
>gi|315453407|ref|YP_004073677.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
gi|315132459|emb|CBY83087.1| flagellar hook protein, FlgE [Helicobacter felis ATCC 49179]
Length = 601
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQ-----NFLMARTHETHLKESDSSGLHWNAHVIE 78
VS NIAN +T YR D F+++ ++ + + +
Sbjct: 22 VSNNIANINTVGYRRND-PEFKSLFASHLNTLGGNTVTANDRNYGAAAGGNAISSKDGEY 80
Query: 79 APLDQTTGVQVSG 91
P D + G
Sbjct: 81 MPSDSDFNMAYQG 93
>gi|220917665|ref|YP_002492969.1| protein of unknown function DUF1078 domain protein
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219955519|gb|ACL65903.1| protein of unknown function DUF1078 domain protein
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 428
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M +T + S +V +NIANA+T +++ ++FE L+Q+ + T +
Sbjct: 1 MSLLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGR-AAFEDALSQSV-IGGTGQI 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + A T + + GN
Sbjct: 59 GLGSRLAGVQKILTQGALASTGLATDLALQGN 90
>gi|89895709|ref|YP_519196.1| hypothetical protein DSY2963 [Desulfitobacterium hafniense Y51]
gi|89335157|dbj|BAE84752.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 312
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
I+ N++N +TP Y+A+ + +F L A
Sbjct: 1 MDILGNNMSNVNTPGYKAQRV-NFAEALAAEMRPAE 35
>gi|293395585|ref|ZP_06639868.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM
4582]
gi|291421904|gb|EFE95150.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM
4582]
Length = 260
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 IPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTMRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|270262399|ref|ZP_06190670.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
gi|270043083|gb|EFA16176.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
Length = 260
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 IPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTMRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|83718065|ref|YP_438389.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
gi|167614837|ref|ZP_02383472.1| flagellar hook protein flgE [Burkholderia thailandensis Bt4]
gi|257141422|ref|ZP_05589684.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
gi|83651890|gb|ABC35954.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
Length = 395
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F IA N ++ + +S NIANA+T ++A ++F T+ + + T++
Sbjct: 3 FNIALSGINAINSQLNTISHNIANANTYGFKAGR-ANFATM----VAGTQANGTYIGSIT 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S + P + + GN
Sbjct: 58 QSVGTRGGFL---PTGRALDGAIDGN 80
>gi|330447901|ref|ZP_08311549.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492092|dbj|GAA06046.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 144
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 16/142 (11%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + IA N + R V+ N+ANA P+ + + F T+ + L
Sbjct: 1 MAFTDIYAIAGSAMNAQTIRLNTVASNLANADAVAANPDDAYQALKPVFATVYGKTQLTG 60
Query: 56 R------THETHLKESDSSGLHWNAHVIEAPLDQTTGVQ--VSGNTVGITNELYKSGHIK 107
+ +G PL G + + E+
Sbjct: 61 EQANYPSAEVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPD---IDVVAEMADMMSAT 117
Query: 108 YLYELNTKLIKKLNSMVMHVVR 129
+E N +++ + SM ++R
Sbjct: 118 RSFETNVEVLSNVKSMQQGLLR 139
>gi|218508323|ref|ZP_03506201.1| probable flagellar basal body rod protein [Rhizobium etli Brasil 5]
gi|327191050|gb|EGE58103.1| putative flagellar basal body rod protein [Rhizobium etli CNPAF512]
Length = 100
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 37/131 (28%), Gaps = 35/131 (26%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M IA R ++ N+AN+STP Y
Sbjct: 1 MSISGITNIALSGMRAQMTRIGAIANNVANSSTPGY-----------------------A 37
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
L S +S ++E V EL + + Y+ N + +
Sbjct: 38 RLNTSLTSTEPGVQAIVEPTTSD----------VDPATELTEMIEAEQAYKANAAVFETG 87
Query: 121 NSM--VMHVVR 129
M ++ ++
Sbjct: 88 ADMWEMLMSIK 98
>gi|30248322|ref|NP_840392.1| flagellar hook protein FlgE [Nitrosomonas europaea ATCC 19718]
gi|30138208|emb|CAD84216.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC
19718]
Length = 410
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ S + + NIANA+T ++ + + F + R ++ +
Sbjct: 3 FQHGLSGLKAASAKLDVTGNNIANANTVGFK-QSQAQFADVYANALGGGR-NQIGIGTQL 60
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ P + V ++GN
Sbjct: 61 AAVAQEFNQGNVTPTNNPLDVAITGN 86
>gi|313903612|ref|ZP_07837002.1| flagellar hook-associated protein FlgK [Thermaerobacter
subterraneus DSM 13965]
gi|313466165|gb|EFR61689.1| flagellar hook-associated protein FlgK [Thermaerobacter
subterraneus DSM 13965]
Length = 533
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 5 TFFQIASQHAN-WLSERQ-KIVSENIANASTPNY 36
TFF + W +R + NIANA+TP Y
Sbjct: 4 TFFGLELARLGLWAQQRALDVTGHNIANANTPGY 37
>gi|146341930|ref|YP_001206978.1| putative flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
gi|146194736|emb|CAL78761.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
Length = 601
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S NIANAST Y+ +SFE ++ R + + + + V + +
Sbjct: 24 ISGNIANASTVGYKGIG-TSFEDLIPNATNPTRQNAGGVTAFAKATITTQGTVSTSSVAT 82
Query: 84 TTGVQVSG 91
+ G
Sbjct: 83 NMAINGDG 90
>gi|167645396|ref|YP_001683059.1| flagellar basal body rod protein FlgG [Caulobacter sp. K31]
gi|167347826|gb|ABZ70561.1| flagellar basal-body rod protein FlgG [Caulobacter sp. K31]
Length = 262
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ +++S NIAN +T ++ + + F+ +L Q A +
Sbjct: 1 MQALRTAATGMAAQQLNVEVISNNIANMNTVGFK-RGRAEFQDLLYQTIERAGAQSSGDG 59
Query: 64 ESDSSGLHWNAHVIEAPL 81
+G+ V +
Sbjct: 60 NVVPTGVQVGGGVKTGSV 77
>gi|4580018|gb|AAD24206.1|AF049342_4 flagellar hook protein FlgE [Treponema denticola ATCC 33520]
Length = 237
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
R ++ N+AN +T ++ + +F+ +++Q A
Sbjct: 12 MQNHQTRMDVIGNNVANVNTTGFK-RGRVNFQDLISQQLSGAA 53
>gi|115523179|ref|YP_780090.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
BisA53]
gi|115517126|gb|ABJ05110.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
BisA53]
Length = 262
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + ++++ NIAN +T +Y+ + + F + Q M +
Sbjct: 1 MRSLAIAATGMSAQQLNVEVIANNIANINTTSYK-RSRAEFTDLFYQIDRMQGVPNRVGE 59
Query: 64 ESDSSGLHWNAHVIEAP---LDQTTGVQVSGNTVGI 96
+ G V A L + +GN +
Sbjct: 60 GAVPEGAKLGLGVRSAAVRKLHLQGALAQTGNAYDL 95
>gi|329928728|ref|ZP_08282577.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
gi|328937509|gb|EGG33927.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
Length = 296
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ +R V++NIAN +T Y+A
Sbjct: 10 TAASGMMTQEQRHNTVTQNIANVNTTGYKA 39
>gi|261409669|ref|YP_003245910.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
gi|261286132|gb|ACX68103.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
Length = 293
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ +R V++NIAN +T Y+A
Sbjct: 7 TAASGMMTQEQRHNTVTQNIANVNTTGYKA 36
>gi|260768782|ref|ZP_05877716.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
gi|260616812|gb|EEX41997.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
Length = 397
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
N + +T T ++ SG + + G+ V +T+EL +
Sbjct: 314 FNAPQELMQTSNTAWTQTYGSGQPVYGIPGSGQFGELASGVLEGSNVDLTSELVHLMSAQ 373
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ NTK I + ++M
Sbjct: 374 RNYQANTKTITTADQLMMS 392
>gi|224370761|ref|YP_002604925.1| FlgF [Desulfobacterium autotrophicum HRM2]
gi|223693478|gb|ACN16761.1| FlgF [Desulfobacterium autotrophicum HRM2]
Length = 226
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 13 HANWLSERQ-KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
ER+ ++ S ++AN T ++ KD+ SF+++ T + L
Sbjct: 10 QGGLRQERKLEVTSNHLANVDTAGFK-KDVVSFDSMFKAALNTDLTQAGVKHTGNPLDLA 68
Query: 72 WNAHVIEAPLDQTTGVQVSGNTV 94
+ ++ +GV+ + N V
Sbjct: 69 LSDEGFFK-VETPSGVRYTRNGV 90
>gi|148980300|ref|ZP_01815987.1| putative flagellar basal-body rod protein [Vibrionales bacterium
SWAT-3]
gi|145961319|gb|EDK26629.1| putative flagellar basal-body rod protein [Vibrionales bacterium
SWAT-3]
Length = 250
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 22 KIVSENIANASTPN-YRAKDISSFETILNQNFLMARTHETHL-KESDSSGLHWNAHVIEA 79
I ++ + +A+ P +D+ + N +L E++ SG
Sbjct: 139 SITADGVVSATIPGQVNPEDLGQITIVKFMNPAGLSAQGGNLFVETEGSGEAVELVAGTE 198
Query: 80 PLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
Q + G+ V + E+ + YE++ K++ + M+ ++ +
Sbjct: 199 GSGQLKQGALEGSNVQVVEEMVDMIATQRAYEMSAKMVSAADEMLQYIAQ 248
>gi|111115108|ref|YP_709726.1| flagellar hook protein FlgE [Borrelia afzelii PKo]
gi|216263795|ref|ZP_03435789.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
gi|110890382|gb|ABH01550.1| flagellar hook protein [Borrelia afzelii PKo]
gi|215979839|gb|EEC20661.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
Length = 442
Score = 34.1 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
R +V NIAN +T ++ K +F+ +++Q+ + T ++ +
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSIS-GASRPTDVRGGTNP 64
>gi|332296506|ref|YP_004438429.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
DSM 14796]
gi|332179609|gb|AEE15298.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
DSM 14796]
Length = 134
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +IA + + + N+ANA + N + K+ F+ + + + L
Sbjct: 3 LRTLEIAGSGLTAQRLKMDVAANNLANAYS-NVKDKNGQIFKRQIVELQESTGKDGSFLG 61
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGN----TVGITNELYKSGHIKYLYELNTKLIKK 119
+ + N+ G V E+ + YE + ++
Sbjct: 62 VKVAGIISDNSPPRMVYDPGNPEANADGYVEYPNVNPIREMVSLINASRSYEADLNVVSA 121
Query: 120 LNSMV 124
SM+
Sbjct: 122 TKSMI 126
>gi|330447905|ref|ZP_08311553.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492096|dbj|GAA06050.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 261
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
KE+ +SG + G+ V + E+ + YE+N K++ +
Sbjct: 192 YKETQASGQAQEIIAGTDGAGSLKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVAQ 259
>gi|315180485|gb|ADT87399.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
Length = 397
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
N + +T T ++ SG + + G+ V +T+EL +
Sbjct: 314 FNAPQELMQTSNTAWTQTYGSGQPVYGIPGSGQFGELASGVLEGSNVDLTSELVHLMSAQ 373
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ NTK I + ++M
Sbjct: 374 RNYQANTKTITTADQLMMS 392
>gi|228938858|ref|ZP_04101458.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971739|ref|ZP_04132360.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978348|ref|ZP_04138725.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
Bt407]
gi|228781365|gb|EEM29566.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
Bt407]
gi|228787829|gb|EEM35787.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820707|gb|EEM66732.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939358|gb|AEA15254.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 137
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDG----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVTQKMYEANTSVLNANKKML 128
>gi|242309757|ref|ZP_04808912.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
98-5489]
gi|239523758|gb|EEQ63624.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
98-5489]
Length = 166
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 40/162 (24%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQN-- 51
++ F I+ + +R ++S NIANA+T YR +++ +F+ +LNQ
Sbjct: 3 LSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGGPYRRRELILKAFNFDKVLNQKYE 62
Query: 52 ------------------FLMARTHETHLK-------ESDSSGLHWNAHVIEAPLDQTTG 86
T + DS +
Sbjct: 63 NSNNLLKYEDPLDEMDSFDEQREPKPTLMSVYVDKIVRDDSQPKMKYEPSHPDANSEGYV 122
Query: 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ N V E+ Y+ N + +M +
Sbjct: 123 AYPNINPVV---EMADLIEATKAYQANVAAFQSAKNMATTAI 161
>gi|190890357|ref|YP_001976899.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
gi|190695636|gb|ACE89721.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
Length = 244
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|209547922|ref|YP_002279839.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209533678|gb|ACI53613.1| flagellar basal body rod protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 244
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|289612565|emb|CBI60084.1| unnamed protein product [Sordaria macrospora]
Length = 159
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQ---NFLMARTHETHLKESDSSGLHWNAHVI 77
+++S N+AN +T ++ +D +SFE + Q A T E+ + G
Sbjct: 1 MRVISNNLANVNTTGFK-RDRASFEAMSYQIITAQGAASTQESRYATGLNLGTGVRIQGT 59
Query: 78 EAPLDQTTGVQVSGNTVGITNE 99
A + + +GN + + E
Sbjct: 60 -ASIQTQGSLATTGNALDMAME 80
>gi|242238970|ref|YP_002987151.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
gi|242131027|gb|ACS85329.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
Length = 251
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAP 80
Q +++ N+ANASTP +RA+ + ++ L RT L + + G + ++
Sbjct: 19 QSVITNNLANASTPGFRAQLSAMRAVPVDGPTLPTRT----LSIASTPGADMSQGPLDYT 74
Query: 81 LDQ-TTGVQVSG 91
VQ G
Sbjct: 75 SRPLDVAVQNDG 86
>gi|238916190|ref|YP_002929707.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
27750]
gi|238871550|gb|ACR71260.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
27750]
Length = 277
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHET----------HLKESDSSGLHW 72
++ N+AN +T Y+ ++ + F+++L QN T L S+
Sbjct: 21 TIANNLANVNTIGYK-QEQTQFKSLLYQNLQAKTTSANGDDKPVGAQVGLGSRVSAVTSI 79
Query: 73 NAHVIEAPLDQTTGVQVSGN 92
D T + GN
Sbjct: 80 YTQGALNATDSLTDFAIDGN 99
>gi|229542504|ref|ZP_04431564.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
gi|229326924|gb|EEN92599.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
Length = 262
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA--KDISSFETILNQNFLMARTHETHLKESD 66
A+ + +++ N++NA TP Y+ I SF +L T +K S
Sbjct: 7 TAASGMIAQQRKTDLLANNLSNADTPGYKTDQSSIRSFPKMLLSYMDKNGTTGEVVK-SV 65
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
S PL + ++ +GN +
Sbjct: 66 GSLATGVYMQETLPLFKQGDLEETGNRTDL 95
>gi|531461|gb|AAA67879.1| orfF [Bacillus subtilis subsp. subtilis str. 168]
Length = 271
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ R +++S NIANA+T Y+A
Sbjct: 7 TATSAMIAQQRRTEMLSNNIANANTSGYKA 36
>gi|332140548|ref|YP_004426286.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
'Deep ecotype']
gi|327550570|gb|AEA97288.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
'Deep ecotype']
Length = 262
Score = 34.1 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ T + E+ SSG L + + + V +T EL + LYE+
Sbjct: 184 GLQPTGQNLFVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQRLYEM 243
Query: 113 NTKLIKKLNSMVMHVVR 129
N+K+I ++ M+ V++
Sbjct: 244 NSKVISSVDQMLGQVIQ 260
>gi|238758108|ref|ZP_04619288.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC
35236]
gi|238703646|gb|EEP96183.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC
35236]
Length = 260
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 IPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTMRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|258514026|ref|YP_003190248.1| hypothetical protein Dtox_0711 [Desulfotomaculum acetoxidans DSM
771]
gi|257777731|gb|ACV61625.1| protein of unknown function DUF1078 domain protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 262
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 12/102 (11%)
Query: 26 ENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTT 85
E IAN S N+ I+ I N L +T ++ + G + + + +
Sbjct: 167 EEIANISIYNF----INPAGLIAQDNKLYLQTEQSGEAAEGAPGTDGYGSLRQGFTEMS- 221
Query: 86 GVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHV 127
V + E+ + + YE+N + IK + M
Sbjct: 222 -------NVDLIQEMVRLIEAQRAYEINARSIKTADDMWGMA 256
>gi|242018362|ref|XP_002429646.1| myst histone acetyltransferase, putative [Pediculus humanus
corporis]
gi|212514631|gb|EEB16908.1| myst histone acetyltransferase, putative [Pediculus humanus
corporis]
Length = 2199
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 12/116 (10%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M P F+ A ER++I+S ++ NA T + + A +
Sbjct: 553 MTPSRLFKTAVSSKQHEQERRRIISGDLFNAGT------RMEEIKMKKRHIIAEATATQQ 606
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGI---TNELYKSGHIKYLYELN 113
H + ++S V++ V + T E S + L+
Sbjct: 607 HHRGTNSGSNDITDAVLQKASLPPGVTPKD---VELFKETRERSNSVRSNNSFSLD 659
>gi|239828562|ref|YP_002951186.1| hypothetical protein GWCH70_3280 [Geobacillus sp. WCH70]
gi|239808855|gb|ACS25920.1| protein of unknown function DUF1078 domain protein [Geobacillus
sp. WCH70]
Length = 283
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
A+ L ++ ++S NIAN++T ++ ++ ++F +L Q F
Sbjct: 7 TAANTMAQLGQQLDVISNNIANSNTTGFKRRE-TNFGELLAQQF 49
>gi|300312833|ref|YP_003776925.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
gi|300075618|gb|ADJ65017.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
Length = 420
Score = 34.1 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ + S+ ++ N+ANAST ++ + F + + + +
Sbjct: 3 FQQGLSGLHGASKHLDVIGNNVANASTVGFKQGQVQ-FADAYANSMNRSGNSPVGIGVTV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG-----NTVGITNELYKSGHIKYLYELN 113
++ A + V ++G +T++ + G ++LN
Sbjct: 62 ANVSQAFTQGNIATTNNALDVAINGDGFFRMAASLTDQSPRYGRN-GQFQLN 112
>gi|304392506|ref|ZP_07374446.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
gi|303295136|gb|EFL89496.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
Length = 262
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ + +++ NIAN +T ++ + + I + L + +
Sbjct: 1 MRALSIAATGMQAQQKNLDVIAHNIANINTTGFKRGRVEFTDLIYDTERLNGIPNRAN-S 59
Query: 64 ESDSSGLHWNAHVIEAPLDQTT---GVQVSGNTVGI 96
+ G H+ V A + V +GN +
Sbjct: 60 ANVPEGAHFGLGVRTASVRNVHLQGQVAQTGNRFDL 95
>gi|228907377|ref|ZP_04071235.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
200]
gi|228852238|gb|EEM97034.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
200]
Length = 137
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF ++L+ + T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGTDLYERRSVVLESNNSFASMLDGSP----TNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|288962672|ref|YP_003452966.1| flagellar hook-associated protein 1 [Azospirillum sp. B510]
gi|288914938|dbj|BAI76422.1| flagellar hook-associated protein 1 [Azospirillum sp. B510]
Length = 465
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 35 NYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
+ A D+ + T+ + M + + ++S NA I A ++ + G V
Sbjct: 373 GFTATDMPASATLGSYATAMVSAQQGYRTGAES---EMNARKISADTLESARINRDG--V 427
Query: 95 GITNELYKSGHIKYLYELNTKLIKKLNSMV 124
I +E+ K I+ Y + ++++ M+
Sbjct: 428 NIDDEMQKLLLIEQSYGASAQVVQVAGRMI 457
>gi|266621920|ref|ZP_06114855.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
13479]
gi|288866393|gb|EFC98691.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
13479]
Length = 144
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 12/140 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
M + I R I+ +N+AN +T YR K ++ E L+ +
Sbjct: 1 MGYLDSLNITGSALTAERFRTDIILQNLANQNTTRTAEGGPYRRKQVALRENQLDFKSEL 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN------TVGITNELYKSGHIKY 108
+ + + P+ + + V E+
Sbjct: 61 GKAMTKADRGGVYVEEVVESQNPLVPVYDPDHPDANEDGYVMMPNVNSAEEMVDLMAATR 120
Query: 109 LYELNTKLIKKLNSMVMHVV 128
YE N + SM + +
Sbjct: 121 AYEANVTALNIAKSMALKAL 140
>gi|254496885|ref|ZP_05109733.1| flagellar basal body rod protein FlgC [Legionella drancourtii
LLAP12]
gi|254353904|gb|EET12591.1| flagellar basal body rod protein FlgC [Legionella drancourtii
LLAP12]
Length = 140
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 8/137 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + F IA + R + N++NA+ + D+ + + + T
Sbjct: 1 MSLGSVFDIAGSALTAETARLTTSASNMSNANVESGNVDDVYRVKYPIFKTVQENATQWM 60
Query: 61 HLKESDSSGLHWNAHVIEAPLD--QTTGVQVSGN------TVGITNELYKSGHIKYLYEL 112
+ + L P+ Q Q V +E+ Y++
Sbjct: 61 GDQINAGVQLKGTYVSTADPIKHYQPNNPQADAKGFIYTPNVNYVDEMANVISASRSYQM 120
Query: 113 NTKLIKKLNSMVMHVVR 129
N +L+ ++ ++
Sbjct: 121 NIELVNNAKQLIQRTLQ 137
>gi|120603465|ref|YP_967865.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
DP4]
gi|120563694|gb|ABM29438.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
DP4]
Length = 698
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
M + F + N + NIAN +TP Y +++ FE
Sbjct: 1 MSISSLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVR-FEEA 46
>gi|114762164|ref|ZP_01441632.1| flagellar basal-body rod protein FlgG [Pelagibaca bermudensis
HTCC2601]
gi|114545188|gb|EAU48191.1| flagellar basal-body rod protein FlgG [Roseovarius sp. HTCC2601]
Length = 261
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART----HE 59
+ +IA+ + R +++S N++N ST Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARR-AEFADLHYQQVARAGTVSAADG 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
T L GL + L Q Q G
Sbjct: 60 TMLPTGVQLGLGARPAAVTMKLAQGALSQTGG 91
>gi|46578934|ref|YP_009742.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
str. Hildenborough]
gi|46448346|gb|AAS95001.1| flagellar hook-associated protein FlgK, putative [Desulfovibrio
vulgaris str. Hildenborough]
gi|311232792|gb|ADP85646.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
RCH1]
Length = 698
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
M + F + N + NIAN +TP Y +++ FE
Sbjct: 1 MSISSLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVR-FEEA 46
>gi|188997545|ref|YP_001931796.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932612|gb|ACD67242.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 136
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 10/129 (7%)
Query: 7 FQIASQHANWLSERQKIVSENIANAS---TPNYRA--KDISSFETILNQN--FLMARTHE 59
+I+ R + + N+AN + T N + + + FE +L+ + +
Sbjct: 6 LEISVSGMQAERVRIDLAASNLANVNSTHTENGQPYRRKVPVFEAVLDAQSQIPVYKVRV 65
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
++E D S V++ V E+ YE N
Sbjct: 66 KDIQE-DPSPFKLKFDPNNPDAGPDGYVRLP--NVDPIREMVDMMTAMRTYEANLTAFNT 122
Query: 120 LNSMVMHVV 128
M++ +
Sbjct: 123 HKDMLIKSL 131
>gi|327193031|gb|EGE59943.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
Length = 244
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|257457611|ref|ZP_05622778.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
gi|257444997|gb|EEV20073.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
Length = 463
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
+ F S N R ++ NIAN +T ++ + +F+ +++Q A
Sbjct: 4 SLFSGVSGMQNH-QTRMDVIGNNIANVNTTGFK-RGRVNFQDLISQQLSGA 52
>gi|224534234|ref|ZP_03674812.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
gi|224514336|gb|EEF84652.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
Length = 442
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
R +V NIAN +T ++ K +F+ +++Q+ + T ++ +
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSIS-GASRPTDVRGGTNP 64
>gi|119947175|ref|YP_944855.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
gi|119865779|gb|ABM05256.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
Length = 261
Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
T +N + LMA+ ++SSG + G+ V + E+
Sbjct: 177 TFMNPSGLMAK-GGNLFSATESSGAANELTAGLDGAGIIKQGALEGSNVQVVEEMVDMIS 235
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
+ YE++ K++ + M+ ++ +
Sbjct: 236 TQRAYEMSAKMVSAADEMLKYIAQ 259
>gi|329890330|ref|ZP_08268673.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
ATCC 11568]
gi|328845631|gb|EGF95195.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
ATCC 11568]
Length = 735
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
M + IA+ N + ++VS+N++N +TP Y + I+ ++ +Q
Sbjct: 1 MSLNSIMNIATSGMNAAQTQLRVVSDNVSNVNTPGYV-RKIADQQSWASQGVGAG 54
>gi|260431757|ref|ZP_05785728.1| flagellar hook-associated protein FlgK [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415585|gb|EEX08844.1| flagellar hook-associated protein FlgK [Silicibacter
lacuscaerulensis ITI-1157]
Length = 483
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 27/73 (36%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M T A + S +VS NIANA TP Y + + + ++ N +
Sbjct: 1 MSMSTALNNALGGLSAASRGAAVVSGNIANALTPGYAKRTLELATSQISGNGVQVVGVTR 60
Query: 61 HLKESDSSGLHWN 73
H ++ L
Sbjct: 61 HHDPVLAANLRAA 73
>gi|218673219|ref|ZP_03522888.1| flagellar basal body rod protein FlgF [Rhizobium etli GR56]
Length = 244
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|218461633|ref|ZP_03501724.1| flagellar basal body rod protein FlgF [Rhizobium etli Kim 5]
Length = 244
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|220903671|ref|YP_002478983.1| flagellar basal body rod protein FlgG [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219867970|gb|ACL48305.1| flagellar basal-body rod protein FlgG [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 261
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMART---HETHLKESDSSGLHWNAHVIEA 79
++S N+AN +T ++ K + FE ++ Q MA + + L G+ +
Sbjct: 21 VISNNLANVNTTGFK-KSRAEFEDLMYQTMRMAGSITEGDNRLPVGIQVGMGTRPTAVHK 79
Query: 80 PLDQTTGVQVSGNTVGITNE 99
Q Q +GNT+ + E
Sbjct: 80 FFTQ-GDFQNTGNTLDVAIE 98
>gi|160939652|ref|ZP_02087000.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
BAA-613]
gi|158437443|gb|EDP15207.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
BAA-613]
Length = 246
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDI--SSFETILNQNFLMARTHETHLKE 64
F A+ + + NIAN T Y+ K + ++F+ L + RT
Sbjct: 5 FYTAASGMLMNQRSLNMAANNIANVKTSGYKPKRLVKTTFDQQLVREMN-GRTEGLGQGS 63
Query: 65 SDSSGLHWNAHVIEAPLDQTT 85
+ S G + P++ T
Sbjct: 64 TISVGTREMTTHGQGPIEDTG 84
>gi|146341929|ref|YP_001206977.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium
sp. ORS278]
gi|146194735|emb|CAL78760.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
[Bradyrhizobium sp. ORS278]
Length = 621
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKD 40
M + A I+S N+ANA+TP Y A++
Sbjct: 1 MGLSSALATAMSGLRSTQAALSIISSNVANANTPGYVAQN 40
>gi|34558104|ref|NP_907919.1| flagellar basal body rod protein FlgG [Wolinella succinogenes DSM
1740]
gi|34483822|emb|CAE10819.1| FLAGELLAR BASAL-BODY ROD PROTEIN DISTAL ROD PROTEIN [Wolinella
succinogenes]
Length = 263
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS---GLHWNAHVIEA 79
+ S NIAN +T Y+ K + F + Q A + + S + GL I
Sbjct: 21 VTSNNIANVNTIGYK-KQRAEFADLFYQVMEYAGSSTSETTLSPTGIEVGLGVRPTAITK 79
Query: 80 PLDQTTGVQVSGNTVGI 96
Q + +GN + I
Sbjct: 80 IFSQ-GNFKETGNNLDI 95
>gi|317153861|ref|YP_004121909.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944112|gb|ADU63163.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
Length = 108
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 37/112 (33%), Gaps = 19/112 (16%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ LS Q++ + NIAN +T + A ++ +Q + E+ + + G+
Sbjct: 7 SALSALSTVQQVSANNIANVNTDGFSASSVTLESGPADQGVRVGSIRESSVPGPNIGGVE 66
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
G+ I E+ + + N ++ M
Sbjct: 67 -------------------GSNTDIGTEMVGMIRTGHAFSANVAAVRASEDM 99
>gi|124516714|gb|EAY58222.1| putative flagellar basal body rod protein [Leptospirillum
rubarum]
Length = 267
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
A + +++ N+AN +TP ++ +D +F T L
Sbjct: 10 SGAQAQEQLMDVLTNNLANVNTPGFK-RDRVTFRTYL 45
>gi|157371205|ref|YP_001479194.1| flagellar basal body rod protein FlgG [Serratia proteamaculans
568]
gi|157322969|gb|ABV42066.1| flagellar basal-body rod protein FlgG [Serratia proteamaculans
568]
Length = 260
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 IPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTMRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|146305251|ref|YP_001185716.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
gi|145573452|gb|ABP82984.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
Length = 243
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 8/67 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
AS+ + L+ R + N+AN +TP +RA E HL + ++G
Sbjct: 12 ASRTMSSLTVR----ANNLANVNTPGFRA----DLEQAQAVAVEGYGYDSRHLAQVKNNG 63
Query: 70 LHWNAHV 76
+
Sbjct: 64 VSLAPGA 70
>gi|325474542|gb|EGC77728.1| flagellar hook protein FlgE [Treponema denticola F0402]
Length = 463
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
R ++ N+AN +T ++ + +F+ +++Q A
Sbjct: 12 MQNHQTRMDVIGNNVANVNTTGFK-RGRVNFQDLISQQLSGAA 53
>gi|321313188|ref|YP_004205475.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
gi|320019462|gb|ADV94448.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
Length = 270
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ R +++S NIANA+T Y+A
Sbjct: 7 TATSAMIAQQRRTEMLSNNIANANTSGYKA 36
>gi|222084865|ref|YP_002543394.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
gi|221722313|gb|ACM25469.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
Length = 262
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
+ IA+ + ++++ NIAN +T Y+ + + F +L Q
Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYK-RSRAEFSDLLYQT 47
>gi|218887603|ref|YP_002436924.1| hypothetical protein DvMF_2517 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758557|gb|ACL09456.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 259
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 20 RQKIVSENIANASTPNYRAKDISSFETILN 49
R +S N+AN +T Y+ +D+ SF+ +
Sbjct: 18 RMNNISNNLANVNTTGYK-RDVISFKDTMQ 46
>gi|242277990|ref|YP_002990119.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
DSM 2638]
gi|242120884|gb|ACS78580.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
DSM 2638]
Length = 694
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 22/61 (36%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
SD++ N + + L Q S V I E+ + Y +LIK N M
Sbjct: 627 GSDAADAKANLSISQTVLKGLVDKQESVGGVSIDEEMDIIASYQRSYRTAAQLIKTANEM 686
Query: 124 V 124
Sbjct: 687 F 687
>gi|254418692|ref|ZP_05032416.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
gi|196184869|gb|EDX79845.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
Length = 705
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQ---NFLMART 57
M + IA+ + ++ S+NIAN TP Y K + + +AR
Sbjct: 1 MSLTSIMNIATSGLQTAQAQLRVTSDNIANVHTPGYVRKTVDQTAAVTQGYGAGVDIARV 60
Query: 58 HETHLKESDSSGLHWNAHVIE 78
+ ++G+ NA
Sbjct: 61 RLATDRFLQAAGMSANADAAR 81
>gi|192289145|ref|YP_001989750.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
TIE-1]
gi|192282894|gb|ACE99274.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
TIE-1]
Length = 587
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 25/65 (38%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+S V EA S + V + E + ++ Y ++LI+ +N+M
Sbjct: 517 AGKASLASSTYSVKEAAQSTYANSLSSQSGVNLDEESARLSELQNKYTAASQLIQAINAM 576
Query: 124 VMHVV 128
+V
Sbjct: 577 FTALV 581
>gi|149189836|ref|ZP_01868116.1| flagellar hook protein E [Vibrio shilonii AK1]
gi|148836322|gb|EDL53279.1| flagellar hook protein E [Vibrio shilonii AK1]
Length = 398
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+A+T+ T +S SG L T + G+ V +T+EL +
Sbjct: 315 FANPQGLAKTNGTAWTQSYGSGAPVMGTPGSGVLGDLTPGALEGSNVDLTSELVNLMTAQ 374
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ N K I + +
Sbjct: 375 RNYQANAKTISTSDKLTQA 393
>gi|83814111|ref|YP_446742.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
gi|83755505|gb|ABC43618.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
Length = 241
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ FQ A+ + + +Q+ V+ N+ANAST Y+ KD F LN+ +
Sbjct: 2 LPRFQNAAAAMSEMRLQQEQVANNLANASTTGYK-KD-RVFTEALNERLTKDGS 53
>gi|42528268|ref|NP_973366.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
gi|4426943|gb|AAD20617.1| flagellar hook protein FlgE [Treponema denticola]
gi|41819538|gb|AAS13285.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
Length = 463
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
R ++ N+AN +T ++ + +F+ +++Q A
Sbjct: 12 MQNHQTRMDVIGNNVANVNTTGFK-RGRVNFQDLISQQLSGAA 53
>gi|291336107|gb|ADD95692.1| hypothetical protein PSSP7_040 [uncultured phage
MedDCM-OCT-S12-C97]
Length = 110
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 16/47 (34%)
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
A + + D SGN+V + L + E L +K
Sbjct: 13 AGTVVSIDDSAGAFDASGNSVSLDQSLVDAARTTLNTEAAAILYQKQ 59
>gi|171059411|ref|YP_001791760.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
gi|170776856|gb|ACB34995.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
Length = 241
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 19 ERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
+RQ+ ++ N+AN ST +RA ++ +F + + T + E+ + ++
Sbjct: 17 QRQETLANNLANVSTVGFRA-EMQAFRAVPVRGD--GATTRAYALETTTGYNPAQGNITA 73
Query: 79 APLDQTTGVQVSG 91
+ +Q +G
Sbjct: 74 TGRNLDVAMQGNG 86
>gi|86356306|ref|YP_468198.1| flagellar basal body rod protein FlgF [Rhizobium etli CFN 42]
gi|86280408|gb|ABC89471.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
Length = 244
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|114330361|ref|YP_746583.1| flagellar hook protein FlgE [Nitrosomonas eutropha C91]
gi|114307375|gb|ABI58618.1| flagellar basal body FlaE domain protein [Nitrosomonas eutropha
C91]
Length = 419
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ S + + NIANA+T ++ + + F + + + ++ +
Sbjct: 3 FQHGLSGLKAASAKLDVTGNNIANANTVGFK-QSQAQFSDVFANSLGGGK-NQIGIGTQV 60
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ A D V ++GN
Sbjct: 61 AAIAQEFAQGNVTSSDNPLDVAITGN 86
>gi|332296626|ref|YP_004438549.1| flagellar hook-basal body protein [Thermodesulfobium narugense
DSM 14796]
gi|332179729|gb|AEE15418.1| flagellar hook-basal body protein [Thermodesulfobium narugense
DSM 14796]
Length = 255
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+V+ NI+N +T ++ + +F +L+Q A + L+ S L +
Sbjct: 21 VVANNISNVNTTGFKESN-PTFADVLSQELSFATSRTNPLQIGAGSKLDSTSLSFTQGPV 79
Query: 83 QTTGVQVS 90
TT
Sbjct: 80 LTTNDPTD 87
>gi|296331270|ref|ZP_06873742.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676257|ref|YP_003867929.1| putative flagellar basal-body rod protein [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151385|gb|EFG92262.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414501|gb|ADM39620.1| putative flagellar basal-body rod protein [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 270
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ R +++S NIANA+T Y+A
Sbjct: 7 TATSAMIAQQRRTEMLSNNIANANTSGYKA 36
>gi|239995123|ref|ZP_04715647.1| flagellar basal body rod protein FlgG [Alteromonas macleodii ATCC
27126]
Length = 262
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ T + E+ SSG L + + + V +T EL + LYE+
Sbjct: 184 GLQPTGQNLYVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQRLYEM 243
Query: 113 NTKLIKKLNSMVMHVVR 129
N+K+I ++ M+ V++
Sbjct: 244 NSKVISSVDQMLGQVIQ 260
>gi|254462007|ref|ZP_05075423.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
HTCC2083]
gi|206678596|gb|EDZ43083.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
HTCC2083]
Length = 237
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)
Query: 21 QKIVSENIANASTPNYRAKDISSFE------TILNQNFLMARTHETHLKESDSSGLHWNA 74
+++ NIANA+T YR + + E + + AR T L +
Sbjct: 19 MSVIASNIANANTTGYRQEGLIFSEVIKGESDAPSLSMATARARATSLAPGTITQTGGPY 78
Query: 75 HVI 77
V
Sbjct: 79 DVA 81
>gi|531462|gb|AAA67880.1| orfG [Bacillus subtilis subsp. subtilis str. 168]
Length = 135
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
AS N L ++ +S N++N++T Y+AKD ++F ++ Q F
Sbjct: 7 TASTTLNQLQQQIDTISSNLSNSNTTGYKAKD-TNFSELVRQQF 49
>gi|75761144|ref|ZP_00741136.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|206970905|ref|ZP_03231857.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
gi|218896677|ref|YP_002445088.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
gi|228900326|ref|ZP_04064556.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
4222]
gi|228920455|ref|ZP_04083800.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228952124|ref|ZP_04114219.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228958024|ref|ZP_04119760.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229069296|ref|ZP_04202586.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
gi|229078926|ref|ZP_04211478.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
gi|229109201|ref|ZP_04238800.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
gi|229127070|ref|ZP_04256069.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
gi|229149946|ref|ZP_04278174.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
gi|229178153|ref|ZP_04305524.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
gi|229189841|ref|ZP_04316852.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
gi|74491372|gb|EAO54596.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|206734541|gb|EDZ51711.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
gi|218541427|gb|ACK93821.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
gi|228593649|gb|EEK51457.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
gi|228605283|gb|EEK62733.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
gi|228633627|gb|EEK90228.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
gi|228656423|gb|EEL12262.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
gi|228674211|gb|EEL29456.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
gi|228704340|gb|EEL56774.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
gi|228713783|gb|EEL65668.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
gi|228801649|gb|EEM48530.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228807656|gb|EEM54180.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228839085|gb|EEM84381.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228859361|gb|EEN03791.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
4222]
Length = 137
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDG----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|119385423|ref|YP_916479.1| hypothetical protein Pden_2696 [Paracoccus denitrificans PD1222]
gi|119375190|gb|ABL70783.1| protein of unknown function DUF1078 domain protein [Paracoccus
denitrificans PD1222]
Length = 446
Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
S R +S+NIAN+ T Y+ D S ++NQ ++ + S + +++
Sbjct: 18 STRLATISDNIANSGTYGYKRVDTSFESMVINQGRGGGLYTANGVRAATSRIVDERGNLV 77
Query: 78 EAPLDQTTGVQVSG 91
P + +SG
Sbjct: 78 --PTSHPLDIAISG 89
>gi|1196326|gb|AAB51418.1| flagellar hook protein [Borrelia burgdorferi]
Length = 372
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|15639714|ref|NP_219164.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025952|ref|YP_001933724.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
SS14]
gi|6015169|sp|O07884|FLGE_TREPA RecName: Full=Flagellar hook protein flgE
gi|2196893|gb|AAB61251.1| FlgE [Treponema pallidum]
gi|3323028|gb|AAC65692.1| flagellar hook protein (flgE) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018527|gb|ACD71145.1| flagellar hook protein [Treponema pallidum subsp. pallidum SS14]
gi|291060091|gb|ADD72826.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 463
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
+ F S N R ++ N+AN +T ++ + +F+ +++Q A
Sbjct: 4 SLFSGVSGMQNH-QTRMDVIGNNVANVNTTGFK-RGRVNFQDLISQQLSAAA 53
>gi|16080693|ref|NP_391521.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311597|ref|ZP_03593444.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315924|ref|ZP_03597729.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320837|ref|ZP_03602131.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325122|ref|ZP_03606416.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
subtilis str. SMY]
gi|6648066|sp|P39752|FLHO_BACSU RecName: Full=Flagellar hook-basal body complex protein flhO
gi|1763700|emb|CAB05950.1| flhO [Bacillus subtilis subsp. subtilis str. 168]
gi|2636165|emb|CAB15657.1| putative flagellar basal-body rod protein [Bacillus subtilis
subsp. subtilis str. 168]
Length = 270
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ R +++S NIANA+T Y+A
Sbjct: 7 TATSAMIAQQRRTEMLSNNIANANTSGYKA 36
>gi|118588711|ref|ZP_01546119.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
gi|118438697|gb|EAV45330.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
Length = 260
Score = 34.1 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++S N+AN T ++ K + F+ +L QN T +
Sbjct: 1 MKALHIAATGMKAQELNVEVISNNVANMRTTGFK-KQRADFQDLLYQNLRRMGTETSDSG 59
Query: 64 ESDSSGLHWNAHV 76
+G+ + V
Sbjct: 60 TIVPTGIQIGSGV 72
>gi|254712013|ref|ZP_05173824.1| flagellar basal body rod protein FlgG [Brucella ceti M644/93/1]
gi|254715082|ref|ZP_05176893.1| flagellar basal body rod protein FlgG [Brucella ceti M13/05/1]
gi|261216792|ref|ZP_05931073.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
gi|261319659|ref|ZP_05958856.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
gi|260921881|gb|EEX88449.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
gi|261292349|gb|EEX95845.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
Length = 241
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
IA+ N ++++ NIAN +T ++ + + F +L Q+ A
Sbjct: 6 IAATGMNAQQLNLEVIANNIANINTTGFK-RARAEFTDLLYQSERTAG 52
>gi|268680907|ref|YP_003305338.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM
6946]
gi|268618938|gb|ACZ13303.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM
6946]
Length = 851
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 21 QKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS--GLHWNAHVIE 78
+ S NIAN +T Y+ ++F +L+Q +A + L +S GL +
Sbjct: 19 MDVESNNIANVNTTGYKYSR-ANFSNLLSQTVSIATAPQGELGGKNSMQIGLGTTISTVT 77
Query: 79 APLDQTTGVQVSGNT 93
+Q + +T
Sbjct: 78 KIFEQGSIETTDKDT 92
>gi|320664476|gb|EFX31627.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
str. LSU-61]
Length = 251
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|218557959|ref|YP_002390872.1| flagellar basal body rod protein FlgF [Escherichia coli S88]
gi|218364728|emb|CAR02418.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli S88]
Length = 251
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|167639076|ref|ZP_02397349.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0193]
gi|177650375|ref|ZP_02933342.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0174]
gi|254734585|ref|ZP_05192297.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
Western North America USA6153]
gi|167512866|gb|EDR88239.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0193]
gi|172083519|gb|EDT68579.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0174]
Length = 137
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+++ T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDRSP----TNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|15801194|ref|NP_287211.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
EDL933]
gi|15830709|ref|NP_309482.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
str. Sakai]
gi|168747147|ref|ZP_02772169.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4113]
gi|168758630|ref|ZP_02783637.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4401]
gi|168764489|ref|ZP_02789496.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4501]
gi|168767736|ref|ZP_02792743.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4486]
gi|168773922|ref|ZP_02798929.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4196]
gi|168790012|ref|ZP_02815019.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC869]
gi|168802022|ref|ZP_02827029.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC508]
gi|195935467|ref|ZP_03080849.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
str. EC4024]
gi|208805942|ref|ZP_03248279.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4206]
gi|208815658|ref|ZP_03256837.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4045]
gi|208822437|ref|ZP_03262756.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4042]
gi|209397223|ref|YP_002269923.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4115]
gi|217328081|ref|ZP_03444163.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. TW14588]
gi|254792459|ref|YP_003077296.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
str. TW14359]
gi|261227018|ref|ZP_05941299.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK2000]
gi|261256252|ref|ZP_05948785.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. FRIK966]
gi|291282097|ref|YP_003498915.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7
str. CB9615]
gi|12514615|gb|AAG55823.1|AE005317_12 flagellar biosynthesis, cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. EDL933]
gi|13360919|dbj|BAB34878.1| flagellar rod protein flgF [Escherichia coli O157:H7 str. Sakai]
gi|187770508|gb|EDU34352.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4196]
gi|188018201|gb|EDU56323.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4113]
gi|189354581|gb|EDU73000.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4401]
gi|189363129|gb|EDU81548.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4486]
gi|189365533|gb|EDU83949.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4501]
gi|189370455|gb|EDU88871.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC869]
gi|189375940|gb|EDU94356.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC508]
gi|208725743|gb|EDZ75344.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4206]
gi|208732306|gb|EDZ80994.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4045]
gi|208737922|gb|EDZ85605.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4042]
gi|209158623|gb|ACI36056.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC4115]
gi|209773368|gb|ACI84996.1| flagellar rod protein flgF [Escherichia coli]
gi|209773370|gb|ACI84997.1| flagellar rod protein flgF [Escherichia coli]
gi|209773372|gb|ACI84998.1| flagellar rod protein flgF [Escherichia coli]
gi|209773374|gb|ACI84999.1| flagellar rod protein flgF [Escherichia coli]
gi|209773376|gb|ACI85000.1| flagellar rod protein flgF [Escherichia coli]
gi|217318508|gb|EEC26934.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. TW14588]
gi|254591859|gb|ACT71220.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O157:H7 str. TW14359]
gi|290761970|gb|ADD55931.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7
str. CB9615]
gi|320189760|gb|EFW64416.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. EC1212]
gi|320637528|gb|EFX07328.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
str. G5101]
gi|320643089|gb|EFX12290.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
str. 493-89]
gi|320648547|gb|EFX17202.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
str. H 2687]
gi|320653861|gb|EFX21935.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320659341|gb|EFX26910.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7
str. USDA 5905]
gi|326339299|gb|EGD63113.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. 1125]
gi|326344740|gb|EGD68488.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
str. 1044]
Length = 251
Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|291486215|dbj|BAI87290.1| flagellar basal-body rod protein [Bacillus subtilis subsp. natto
BEST195]
Length = 270
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A+ R +++S NIANA+T Y+A
Sbjct: 7 TATSAMIAQQRRTEMLSNNIANANTSGYKA 36
>gi|241203100|ref|YP_002974196.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240856990|gb|ACS54657.1| flagellar basal-body rod protein FlgF [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 244
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLNTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|148266116|ref|YP_001232822.1| flagellar basal body rod protein FlgG [Geobacter uraniireducens
Rf4]
gi|146399616|gb|ABQ28249.1| flagellar basal-body rod protein FlgG [Geobacter uraniireducens
Rf4]
Length = 262
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKES 65
A+ +V+ N+AN +T ++ K + F+ ++ QN + T+ T +
Sbjct: 7 TAASGMQAQQLNIDVVANNLANVNTTGFK-KSRADFQDLMYQNLKTSGAPSTNATQIPTG 65
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
GL A + + +GN + + E
Sbjct: 66 IQVGLGSKAAAVSKIF-TAGNITQTGNEMDLAIE 98
>gi|254488392|ref|ZP_05101597.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
gi|214045261|gb|EEB85899.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
Length = 261
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQNFLMARTHET 60
+ +IA+ + R + +S N+AN ST Y A+ + L + ++ + T
Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLANMSTTGYNARRAEFSDLHYQQLARAGSVSASDGT 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
L GL + L Q + G
Sbjct: 61 VLPTGVQLGLGVRPAAVSMQLAQGSLSVTGG 91
>gi|183598618|ref|ZP_02960111.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC
25827]
gi|188020797|gb|EDU58837.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC
25827]
Length = 251
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK 39
A A E Q IVS NIAN ST ++A+
Sbjct: 7 TAMGGARHALENQAIVSNNIANVSTSGFKAQ 37
>gi|90418392|ref|ZP_01226304.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
gi|90338064|gb|EAS51715.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
Length = 262
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ N ++++ NIAN +T ++ + + F +L Q +
Sbjct: 1 MRALAIAATGMNAQQTNVEVIANNIANINTTGFK-RARAEFTDLLYQVERAQGVAARGGQ 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ---TTGVQVSGNTVGI 96
G A + + +GN + +
Sbjct: 60 GVVPEGAQLGLGTRLAAIRNLHIQGTLNQTGNKLDL 95
>gi|330818584|ref|YP_004362289.1| flagellar basal body rod protein FlgF [Burkholderia gladioli
BSR3]
gi|327370977|gb|AEA62333.1| flagellar basal body rod protein FlgF [Burkholderia gladioli
BSR3]
Length = 250
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 27/70 (38%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A E+Q +++ N+ANAST +RA+ + +N T +
Sbjct: 7 TAMTGAGQALEQQSVIANNLANASTTGFRAQLATYRAVPMNFGEASNPTTTRTFVLDSTP 66
Query: 69 GLHWNAHVIE 78
G + I
Sbjct: 67 GADYTPGPIT 76
>gi|323190589|gb|EFZ75861.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
Length = 251
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|225850273|ref|YP_002730507.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
gi|225645322|gb|ACO03508.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
Length = 136
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILN---QNFLM 54
++ +A+Q R I S N+AN ++ YR + + F+ +L+ + +
Sbjct: 8 VSVTGMAAQRI-----RIDITSSNLANVNSTRTEDGQPYR-RKVPVFQAVLDNQTKTPVY 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ D S DQ V V E+ YE N
Sbjct: 62 KVKIPEVIE--DPSPFKLKFDPSHPDADQNGYVAYP--NVDPLREMVDMMSAIRTYEANL 117
Query: 115 KLIKKLNSMVMHVV 128
M++ +
Sbjct: 118 TAFNTHKDMLLKSL 131
>gi|146311247|ref|YP_001176321.1| flagellar basal body rod protein FlgF [Enterobacter sp. 638]
gi|145318123|gb|ABP60270.1| flagellar basal-body rod protein FlgF [Enterobacter sp. 638]
Length = 251
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|191168482|ref|ZP_03030270.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
gi|190901501|gb|EDV61262.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
Length = 251
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|114330363|ref|YP_746585.1| flagellar basal body rod protein FlgG [Nitrosomonas eutropha C91]
gi|114307377|gb|ABI58620.1| flagellar basal-body rod protein FlgG [Nitrosomonas eutropha C91]
Length = 260
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I+ + + +++ N+AN ST ++ + FE +L Q + + S
Sbjct: 7 ISKTGLDAQQTKMDVIANNLANISTNGFK-RMRPVFEDLLYQTIRQPGAQSSE-RTRLPS 64
Query: 69 GLHWNAHVIEAPLDQ---TTGVQVSGNT--VGITNE 99
GL V + +Q +GNT V I E
Sbjct: 65 GLQLGTGVRPVATENIFLQGNLQQTGNTRDVAIQGE 100
>gi|309798071|ref|ZP_07692446.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
gi|308118354|gb|EFO55616.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
Length = 251
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|254500847|ref|ZP_05112998.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii
DFL-11]
gi|222436918|gb|EEE43597.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii
DFL-11]
Length = 260
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHV 76
+++S N+AN T Y+ K + F+ +L QN T + +G+ V
Sbjct: 19 EVISNNVANMRTTGYK-KQRADFQDLLYQNLRRMGTETSDDGTIVPTGIQIGTGV 72
>gi|118477180|ref|YP_894331.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis str.
Al Hakam]
gi|118416405|gb|ABK84824.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
Hakam]
Length = 137
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+ + T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDGSL----TNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|2494530|sp|Q56326|FLGE_TREPH RecName: Full=Flagellar hook protein flgE
gi|439981|gb|AAA73467.1| flagellar hook polypeptide [Treponema phagedenis]
Length = 463
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
+ F S N R ++ N+AN +T ++ + +F+ +++Q A
Sbjct: 4 SLFSGVSGMQNH-QTRMDVIGNNVANVNTTGFK-RGRVNFQDLISQQLSGA 52
>gi|157160604|ref|YP_001457922.1| flagellar basal body rod protein FlgF [Escherichia coli HS]
gi|157066284|gb|ABV05539.1| flagellar basal-body rod protein FlgF [Escherichia coli HS]
Length = 251
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|116626491|ref|YP_828647.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229653|gb|ABJ88362.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 241
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRA 38
M P+T IA+ E +++ N+ANAST Y+A
Sbjct: 1 MDPLT--AIAASGLRARMESLDLLANNVANASTGGYKA 36
>gi|157371206|ref|YP_001479195.1| flagellar basal body rod protein FlgF [Serratia proteamaculans
568]
gi|157322970|gb|ABV42067.1| flagellar basal-body rod protein FlgF [Serratia proteamaculans
568]
Length = 251
Score = 34.1 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI-------LNQNFLMARTHETH 61
A A E+Q + + N+ANASTP +RA+ +S+ + L + + A T
Sbjct: 7 TAMGAARQTLEQQSVTANNLANASTPGFRAQ-LSALRAVPVDGPSLLTRTLVTASTPGAD 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + + V G
Sbjct: 66 MSQGALNYTARPLDVALQQDGFLAVSLPDG 95
>gi|22126389|ref|NP_669812.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10]
gi|45441408|ref|NP_992947.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar
Microtus str. 91001]
gi|108807174|ref|YP_651090.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua]
gi|108812482|ref|YP_648249.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516]
gi|145598609|ref|YP_001162685.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F]
gi|149366250|ref|ZP_01888285.1| flagellar basal-body rod protein FlgF [Yersinia pestis CA88-4125]
gi|162420290|ref|YP_001606474.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola]
gi|165926032|ref|ZP_02221864.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938686|ref|ZP_02227241.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010809|ref|ZP_02231707.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211025|ref|ZP_02237060.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401087|ref|ZP_02306590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420459|ref|ZP_02312212.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425815|ref|ZP_02317568.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167467492|ref|ZP_02332196.1| flagellar basal-body rod protein FlgF [Yersinia pestis FV-1]
gi|218928923|ref|YP_002346798.1| flagellar basal body rod protein FlgF [Yersinia pestis CO92]
gi|229896243|ref|ZP_04511413.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
gi|229897178|ref|ZP_04512334.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229897904|ref|ZP_04513055.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902864|ref|ZP_04517981.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
gi|270486644|ref|ZP_06203718.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM D27]
gi|294504029|ref|YP_003568091.1| flagellar basal-body rod protein FlgF [Yersinia pestis Z176003]
gi|21959375|gb|AAM86063.1|AE013853_11 cell-proximal portion of basal-body rod protein [Yersinia pestis
KIM 10]
gi|45436268|gb|AAS61824.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Microtus str. 91001]
gi|108776130|gb|ABG18649.1| flagellar basal-body rod protein FlgF [Yersinia pestis Nepal516]
gi|108779087|gb|ABG13145.1| flagellar basal-body rod protein FlgF [Yersinia pestis Antiqua]
gi|115347534|emb|CAL20443.1| flagellar basal-body rod protein FlgF [Yersinia pestis CO92]
gi|145210305|gb|ABP39712.1| flagellar basal-body rod protein FlgF [Yersinia pestis Pestoides F]
gi|149292663|gb|EDM42737.1| flagellar basal-body rod protein FlgF [Yersinia pestis CA88-4125]
gi|162353105|gb|ABX87053.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola]
gi|165913300|gb|EDR31922.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922236|gb|EDR39413.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990153|gb|EDR42454.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166208205|gb|EDR52685.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962154|gb|EDR58175.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049476|gb|EDR60884.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055214|gb|EDR65011.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229680311|gb|EEO76410.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
gi|229688945|gb|EEO81010.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693515|gb|EEO83564.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701166|gb|EEO89195.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
gi|262361785|gb|ACY58506.1| flagellar basal-body rod protein FlgF [Yersinia pestis D106004]
gi|262366079|gb|ACY62636.1| flagellar basal-body rod protein FlgF [Yersinia pestis D182038]
gi|270335148|gb|EFA45925.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM D27]
gi|294354488|gb|ADE64829.1| flagellar basal-body rod protein FlgF [Yersinia pestis Z176003]
gi|320015466|gb|ADV99037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 209
Score = 34.1 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 14/86 (16%)
Query: 21 QKIVSENIANASTPNYRAK----DISSFETILNQNFLMARTHETHLKES----DSSGLHW 72
Q + + N+ANASTP +RA+ + M T + S + SG
Sbjct: 19 QAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPL 78
Query: 73 NAHVIEAP------LDQTTGVQVSGN 92
+ + + D + +GN
Sbjct: 79 DVALQQDGYLAVQLPDGSEAYTRNGN 104
>gi|153938711|ref|YP_001391964.1| flagellar basal body rod protein FlgC [Clostridium botulinum F str.
Langeland]
gi|152934607|gb|ABS40105.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
Langeland]
gi|295319981|gb|ADG00359.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
230613]
Length = 144
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
I F A+ LS R ++ NI+NA+T Y+ K E + N+
Sbjct: 2 IKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNKK 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIE-----APLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
E L ++G+ + + + D VS V + NE+
Sbjct: 62 NGATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVRT 121
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE N ++ SM +
Sbjct: 122 YEANVTVMNAEKSMFGKAL 140
>gi|769850|gb|AAA91361.1| flagellar distal rod protein [Borrelia burgdorferi N40]
Length = 372
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|89072315|ref|ZP_01158894.1| flagellar hook protein [Photobacterium sp. SKA34]
gi|89051847|gb|EAR57299.1| flagellar hook protein [Photobacterium sp. SKA34]
Length = 398
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ +T+ T +S SSG N L + G+ V +T+EL +
Sbjct: 315 FANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEGSNVDLTSELVSLMTAQ 374
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ N K I + +
Sbjct: 375 RNYQANAKTISTSDKLTQS 393
>gi|126463746|ref|YP_001044860.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17029]
gi|126105410|gb|ABN78088.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17029]
Length = 261
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ QIA+ + R ++S N+AN ST Y A+ + F + Q + T
Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARR-ADFADLHYQQVVRPGTVSAEDG 59
Query: 64 ESDSSGLHWNAHVIEAPLD 82
+G+ V + +
Sbjct: 60 RMLPTGVQLGMGVRPSAVS 78
>gi|300928371|ref|ZP_07143905.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
gi|300463629|gb|EFK27122.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
Length = 251
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|288554367|ref|YP_003426302.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
gi|288545527|gb|ADC49410.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
Length = 281
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISS----FETILNQNFLMART---HETHL 62
AS L + +S N+AN++T ++ ++ + F+ + N T +
Sbjct: 8 ASVTMGQLQRKMDTLSHNMANSNTTGFKRREATFSDLLFQQVNNNTDTRYETGRLTPNGI 67
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVS 90
+ + + A +E Q T ++
Sbjct: 68 RVGAGAKIAQTALRMEQGAIQNTDRRLD 95
>gi|251789168|ref|YP_003003889.1| flagellar hook protein FlgE [Dickeya zeae Ech1591]
gi|247537789|gb|ACT06410.1| flagellar basal body FlaE domain protein [Dickeya zeae Ech1591]
Length = 405
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A N S ++ NIAN++T ++A +IS + N + + L++
Sbjct: 3 FSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTRVASVLQDFT 62
Query: 67 SSGLHWNAHVIEAPLDQTTGVQ-VSGN 92
+ ++ + ++ ++ + + ++GN
Sbjct: 63 NGSINSTSRALDVAINGSGFYRLLNGN 89
>gi|323165587|gb|EFZ51374.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
Length = 143
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|288554150|ref|YP_003426085.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus
OF4]
gi|288545310|gb|ADC49193.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus
OF4]
Length = 523
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 26 ENIANASTPNYRAKDISSFETILNQNFLMARTH-ETHLKESDSSGLHWNAH 75
NIANA+TP Y + ++ + + M R HL +G
Sbjct: 27 HNIANANTPGYSRQRVNFTQAEPYPSIGMNRPMLPGHLGTGTKAGSIQRVR 77
>gi|205373385|ref|ZP_03226189.1| flagellar hook protein FlgE [Bacillus coahuilensis m4-4]
Length = 426
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ ++ NIAN +T ++ ++ F+ ++NQ A T
Sbjct: 10 SGMKNAQTKLDVIGNNIANVNTYGFKKGRVT-FQDLMNQTMSGATT 54
>gi|297585402|ref|YP_003701182.1| fagellar hook-basal body protein [Bacillus selenitireducens
MLS10]
gi|297143859|gb|ADI00617.1| fagellar hook-basal body protein [Bacillus selenitireducens
MLS10]
Length = 276
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTH 58
L ++ V N+AN +T ++ +D+S + + Q + RT
Sbjct: 12 MGQLQKKLDTVGNNLANVNTIGFKRRDVSFNDLLFQQVNNLNRTE 56
>gi|148380622|ref|YP_001255163.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
ATCC 3502]
gi|153931376|ref|YP_001384908.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
ATCC 19397]
gi|153937867|ref|YP_001388377.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
Hall]
gi|148290106|emb|CAL84225.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
3502]
gi|152927420|gb|ABS32920.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
ATCC 19397]
gi|152933781|gb|ABS39280.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
Hall]
Length = 144
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 4 ITFFQIASQHANWLSE---RQKIVSENIANASTPN------YRAKDISSFETILNQNFLM 54
I F A+ LS R ++ NI+NA+T Y+ K E + N+
Sbjct: 2 IKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNKK 61
Query: 55 ARTHETHLKESDSSGLHWNAHVIE-----APLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
E L ++G+ + + + D VS V + NE+
Sbjct: 62 NGATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRT 121
Query: 110 YELNTKLIKKLNSMVMHVV 128
YE N ++ SM +
Sbjct: 122 YEANVTVMNAEKSMFGKAL 140
>gi|261821154|ref|YP_003259260.1| flagellar basal body rod protein FlgF [Pectobacterium wasabiae
WPP163]
gi|261605167|gb|ACX87653.1| flagellar basal-body rod protein FlgF [Pectobacterium wasabiae
WPP163]
Length = 251
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 19 ERQKIVSENIANASTPNYRAK 39
E+Q I + N+ANASTP +RA+
Sbjct: 17 EKQAITANNLANASTPGFRAQ 37
>gi|225181603|ref|ZP_03735044.1| protein of unknown function DUF1078 domain protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167711|gb|EEG76521.1| protein of unknown function DUF1078 domain protein [Dethiobacter
alkaliphilus AHT 1]
Length = 408
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ ++ NIAN +T ++A + F+ IL+QN A + + + +
Sbjct: 10 SGLRNHQTKMDVIGNNIANVNTTAFKAGRVR-FQDILSQNIRGASAPQDGRGGINPAQVG 68
Query: 72 WNAHVIEAPLDQTTGVQVS 90
V T G S
Sbjct: 69 LGMSVASIDTIHTPGSLQS 87
>gi|333008275|gb|EGK27749.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
Length = 90
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F IA S+R + + N+ANA + P+ YRAK +
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFLVNAAPGAATG 60
Query: 55 A 55
Sbjct: 61 G 61
>gi|331682579|ref|ZP_08383198.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
gi|331080210|gb|EGI51389.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|301023264|ref|ZP_07187061.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
gi|284920900|emb|CBG33963.1| flagellar basal-body rod protein FlgF [Escherichia coli 042]
gi|300397109|gb|EFJ80647.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|238758109|ref|ZP_04619289.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC
35236]
gi|238703647|gb|EEP96184.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC
35236]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
A A E+Q + + N+AN +TP +RA+ + ++ LM RT
Sbjct: 7 TAMGAARQSLEKQAVTANNLANVATPGFRAQLTAMRAIPIDGPSLMTRT 55
>gi|187932642|ref|YP_001885066.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str.
Eklund 17B]
gi|187720795|gb|ACD22016.1| flagellar hook-basal body complex protein [Clostridium botulinum B
str. Eklund 17B]
Length = 257
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 19/116 (16%)
Query: 26 ENIANASTPNYRAKDISSFETILNQNFLMARTHETH------------LKESDSSGLHWN 73
N A P Y KD F N N A TH L++ + +
Sbjct: 139 NNATGAEEPIYVGKD--EFSLDGNNNLQSAAGESTHTLLTADFTEYAPLEKVGDNYYKGD 196
Query: 74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
V A ++ GV + N V T EL K IK +E N +K SM V+
Sbjct: 197 NPVYNAVVNVRQGVLETSN-VNPTEELVKLMEIKRQFETN----QKFVSMQDETVQ 247
>gi|90577344|ref|ZP_01233155.1| flagellar hook protein [Vibrio angustum S14]
gi|90440430|gb|EAS65610.1| flagellar hook protein [Vibrio angustum S14]
Length = 408
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ +T+ T +S SSG N L + G+ V +T+EL +
Sbjct: 325 FANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEGSNVDLTSELVSLMTAQ 384
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ N K I + +
Sbjct: 385 RNYQANAKTISTSDKLTQS 403
>gi|121997317|ref|YP_001002104.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
SL1]
gi|121588722|gb|ABM61302.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
SL1]
Length = 261
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+A + + ++ S N+AN +T ++ KD ++FE + Q + +
Sbjct: 7 VAKTGLDAQQKSMQVTSNNLANVNTNGFK-KDRANFEDLFYQTVRQPGSRAS 57
>gi|238782793|ref|ZP_04626822.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
43970]
gi|238716216|gb|EEQ08199.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
43970]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
A AN RQ + S N+ANAST +RA+ +S+F +
Sbjct: 7 TAMGAANAALNRQGVTSNNLANASTTGFRAQ-LSAFRAV 44
>gi|82544457|ref|YP_408404.1| flagellar basal body rod protein FlgF [Shigella boydii Sb227]
gi|187731130|ref|YP_001880751.1| flagellar basal body rod protein FlgF [Shigella boydii CDC
3083-94]
gi|81245868|gb|ABB66576.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
gi|187428122|gb|ACD07396.1| flagellar basal-body rod protein FlgF [Shigella boydii CDC
3083-94]
gi|320186976|gb|EFW61689.1| Flagellar basal-body rod protein FlgF [Shigella flexneri CDC
796-83]
gi|332094101|gb|EGI99153.1| flagellar basal-body rod protein FlgF [Shigella boydii 3594-74]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|330447903|ref|ZP_08311551.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492094|dbj|GAA06048.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 398
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ +T+ T +S SSG N L + G+ V +T+EL +
Sbjct: 315 FANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEGSNVDLTSELVSLMTAQ 374
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ N K I + +
Sbjct: 375 RNYQANAKTISTSDKLTQS 393
>gi|293414370|ref|ZP_06657019.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
gi|291434428|gb|EFF07401.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|215486286|ref|YP_002328717.1| flagellar basal body rod protein FlgF [Escherichia coli O127:H6
str. E2348/69]
gi|306814074|ref|ZP_07448247.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
gi|312968849|ref|ZP_07783056.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
gi|331657139|ref|ZP_08358101.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
gi|215264358|emb|CAS08715.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli O127:H6 str. E2348/69]
gi|305852711|gb|EFM53159.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
gi|312286251|gb|EFR14164.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
gi|331055387|gb|EGI27396.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|198244335|ref|YP_002215958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|197938851|gb|ACH76184.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326623706|gb|EGE30051.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 260
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSG-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|254255087|ref|ZP_04948404.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
gi|124899732|gb|EAY71575.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
Length = 419
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%)
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
+ T S ++G P+D+ + + V +T EL
Sbjct: 334 ATFQNADGLVSVSGTGWHASAAAGEALYGVAGAGPIDKLVVGALEQSNVELTEELVNLMS 393
Query: 106 IKYLYELNTKLIKKLNSMVMHVVR 129
+ Y+ N+K++ N MV +++
Sbjct: 394 AQQNYQANSKVLSTENEMVRTLMQ 417
>gi|170020527|ref|YP_001725481.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC
8739]
gi|312971214|ref|ZP_07785392.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
gi|169755455|gb|ACA78154.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC
8739]
gi|310336416|gb|EFQ01602.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|74317651|ref|YP_315391.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
ATCC 25259]
gi|74057146|gb|AAZ97586.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
ATCC 25259]
Length = 246
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A A E+Q S N+ANA+T +RA+ I F + Q ++ T + + S
Sbjct: 7 TAMTGAKHALEQQATTSHNLANATTTGFRAQ-IDQFRAVPVQGAIL-PTRAFVVDSTTGS 64
Query: 69 GLHWNAHVIEAPLDQTTGVQVSG 91
A + + VQ G
Sbjct: 65 DFRSGA-IQHTGRELDMAVQGDG 86
>gi|85058011|ref|YP_453713.1| flagellar hook protein FlgE [Sodalis glossinidius str.
'morsitans']
gi|84778531|dbj|BAE73308.1| flagellar hook protein FlgE [Sodalis glossinidius str.
'morsitans']
Length = 404
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F N ++ ++ NIANA T +++ +SF + +++ + +++
Sbjct: 3 FAQGVSGLNAAAQALDVIGNNIANAQTVGFKSSS-ASFADMFSESMIGLGVQLAGVQQDF 61
Query: 67 SSGLHWNAH 75
+ G
Sbjct: 62 NDGTMIAGA 70
>gi|193069514|ref|ZP_03050468.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
gi|192957262|gb|EDV87711.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|110641253|ref|YP_668983.1| flagellar basal body rod protein FlgF [Escherichia coli 536]
gi|191172387|ref|ZP_03033928.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
gi|300982620|ref|ZP_07176204.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
gi|110342845|gb|ABG69082.1| flagellar basal-body rod protein FlgF [Escherichia coli 536]
gi|190907271|gb|EDV66869.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
gi|300307085|gb|EFJ61605.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
gi|324013351|gb|EGB82570.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 60-1]
Length = 251
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|324113872|gb|EGC07846.1| flagellar basal-body rod protein FlgF [Escherichia fergusonii
B253]
gi|325497615|gb|EGC95474.1| flagellar basal body rod protein FlgF [Escherichia fergusonii
ECD227]
Length = 251
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|331672597|ref|ZP_08373386.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
gi|331070240|gb|EGI41606.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
Length = 251
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|227112522|ref|ZP_03826178.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 251
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 19 ERQKIVSENIANASTPNYRAK 39
E+Q I + N+ANASTP +RA+
Sbjct: 17 EKQAITANNLANASTPGFRAQ 37
>gi|331646335|ref|ZP_08347438.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
gi|222032830|emb|CAP75569.1| flagellar basal-body rod protein flgF [Escherichia coli LF82]
gi|281178186|dbj|BAI54516.1| flagellar basal-body rod protein FlgF [Escherichia coli SE15]
gi|312945639|gb|ADR26466.1| flagellar basal body rod protein FlgF [Escherichia coli O83:H1
str. NRG 857C]
gi|330910891|gb|EGH39401.1| flagellar basal-body rod protein FlgF [Escherichia coli AA86]
gi|331045087|gb|EGI17214.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
Length = 251
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|126444045|ref|YP_001061246.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
gi|134280998|ref|ZP_01767708.1| flagellar biosynthesis/type III secretory pathway lipoprotein
[Burkholderia pseudomallei 305]
gi|167725930|ref|ZP_02409166.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
gi|167905090|ref|ZP_02492295.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC
13177]
gi|254182894|ref|ZP_04889487.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
gi|254299686|ref|ZP_04967135.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
gi|125657218|gb|ABN48706.1| flagellar hook protein FlgE [Burkholderia pseudomallei]
gi|126223536|gb|ABN87041.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
gi|134248020|gb|EBA48104.1| flagellar biosynthesis/type III secretory pathway lipoprotein
[Burkholderia pseudomallei 305]
gi|157809637|gb|EDO86807.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
gi|184213428|gb|EDU10471.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
Length = 395
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F IA N ++ + +S NIANA+T ++A ++F T+ + + T++
Sbjct: 3 FNIALSGINAINSQLNTISHNIANANTYGFKAGR-ANFATM----VAGTQANGTYIGSIT 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S + P + + GN
Sbjct: 58 QSVGTRGGFL---PTGRALDGAIDGN 80
>gi|324007917|gb|EGB77136.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 57-2]
Length = 251
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|323947621|gb|EGB43625.1| flagellar basal-body rod protein FlgF [Escherichia coli H120]
Length = 251
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|300954383|ref|ZP_07166837.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
gi|300318619|gb|EFJ68403.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
Length = 251
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|254698190|ref|ZP_05160018.1| flagellar hook protein FlgE [Brucella abortus bv. 2 str. 86/8/59]
gi|260762637|ref|ZP_05874969.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
gi|260673058|gb|EEX59879.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
Length = 396
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 59 SVLTDVRYGISDQGGIR--STSSTTDLTIDGN 88
>gi|157155680|ref|YP_001462311.1| flagellar basal body rod protein FlgF [Escherichia coli E24377A]
gi|193064568|ref|ZP_03045648.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
gi|256018666|ref|ZP_05432531.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
gi|260843317|ref|YP_003221095.1| flagellar component FlgF of cell-proximal portion of basal-body
rod [Escherichia coli O103:H2 str. 12009]
gi|260854560|ref|YP_003228451.1| flagellar component FlgF of cell-proximal portion of basal-body
rod [Escherichia coli O26:H11 str. 11368]
gi|260867440|ref|YP_003233842.1| flagellar component FlgF of cell-proximal portion of basal-body
rod [Escherichia coli O111:H- str. 11128]
gi|293433367|ref|ZP_06661795.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
gi|300816779|ref|ZP_07096999.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
gi|300922603|ref|ZP_07138703.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
gi|301328553|ref|ZP_07221614.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
gi|332279735|ref|ZP_08392148.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
gi|157077710|gb|ABV17418.1| flagellar basal-body rod protein FlgF [Escherichia coli E24377A]
gi|192927820|gb|EDV82434.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
gi|257753209|dbj|BAI24711.1| flagellar component FlgF of cell-proximal portion of basal-body
rod [Escherichia coli O26:H11 str. 11368]
gi|257758464|dbj|BAI29961.1| flagellar component FlgF of cell-proximal portion of basal-body
rod [Escherichia coli O103:H2 str. 12009]
gi|257763796|dbj|BAI35291.1| flagellar component FlgF of cell-proximal portion of basal-body
rod [Escherichia coli O111:H- str. 11128]
gi|291324186|gb|EFE63608.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
gi|300421080|gb|EFK04391.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
gi|300530553|gb|EFK51615.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
gi|300844945|gb|EFK72705.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
gi|323156884|gb|EFZ43018.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
gi|323175692|gb|EFZ61286.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
gi|323185800|gb|EFZ71161.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
gi|324117352|gb|EGC11259.1| flagellar basal-body rod protein FlgF [Escherichia coli E1167]
gi|332102087|gb|EGJ05433.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
Length = 251
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|206889889|ref|YP_002248123.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741827|gb|ACI20884.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 434
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
++ +NIANA+T ++A ++F IL+Q A
Sbjct: 20 SVIGDNIANANTVGFKASR-ANFADILSQTLGGASA 54
>gi|83595982|gb|ABC25342.1| flagellar hook protein [uncultured marine bacterium Ant24C4]
Length = 437
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
+ R +S+NIAN+ST Y+ + ++ F++++ +N T
Sbjct: 18 ATRLATISDNIANSSTFGYK-RAVTDFQSLVIENSNSKYTAGG 59
>gi|89067518|ref|ZP_01155031.1| flagellar hook-associated protein [Oceanicola granulosus
HTCC2516]
gi|89047087|gb|EAR53141.1| flagellar hook-associated protein [Oceanicola granulosus
HTCC2516]
Length = 478
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
M T A S R +IVS NIANA T Y + ++ T+L
Sbjct: 1 MSIATSIGSALSGLEVASRRAEIVSGNIANALTEGYGRRSLAVSSTML 48
>gi|323136553|ref|ZP_08071634.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
gi|322397870|gb|EFY00391.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
Length = 240
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
L +R ++ N+AN+ST YRA + SF+T++++
Sbjct: 15 LDKRLTTIAANVANSSTIGYRATGV-SFDTVMSKT 48
>gi|255321464|ref|ZP_05362622.1| flagellar basal-body rod protein FlgC [Campylobacter showae
RM3277]
gi|255301320|gb|EET80579.1| flagellar basal-body rod protein FlgC [Campylobacter showae
RM3277]
Length = 165
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDI----SSFETILNQNF 52
++ F I+ + R ++S NIANA+T P YR +++ F+++LN
Sbjct: 5 LSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGGP-YRRREVIFKAVDFDSVLNDEV 63
Query: 53 L 53
Sbjct: 64 A 64
>gi|256830992|ref|YP_003159720.1| hypothetical protein Dbac_3229 [Desulfomicrobium baculatum DSM
4028]
gi|256580168|gb|ACU91304.1| protein of unknown function DUF1078 domain protein
[Desulfomicrobium baculatum DSM 4028]
Length = 123
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
Q +S Q++ + N+AN +T + + + FET LN + + + + S L
Sbjct: 6 QAMQGISFSQQVAANNVANMNTNGFHSSRVE-FETGLNGQGVQVQ---DVYENTASGPLV 61
Query: 72 WNAHVIEAPLDQTT-GVQVSGNTVGITNELYKSGH 105
+ +E + V G+ + E+ +
Sbjct: 62 PSGEYVETDEGLRYEEMLVEGSNTDLATEMVQMIE 96
>gi|227328339|ref|ZP_03832363.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 19 ERQKIVSENIANASTPNYRAK 39
E+Q I + N+ANASTP +RA+
Sbjct: 17 EKQAITANNLANASTPGFRAQ 37
>gi|221640825|ref|YP_002527087.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
KD131]
gi|332559802|ref|ZP_08414124.1| FlgG2 [Rhodobacter sphaeroides WS8N]
gi|221161606|gb|ACM02586.1| Flagellar basal-body rod protein FlgG precursor [Rhodobacter
sphaeroides KD131]
gi|332277514|gb|EGJ22829.1| FlgG2 [Rhodobacter sphaeroides WS8N]
Length = 261
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ QIA+ + R ++S N+AN ST Y A+ + F + Q + T
Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARR-ADFADLHYQQVVRPGTVSAEDG 59
Query: 64 ESDSSGLHWNAHVIEAPLD 82
+G+ V + +
Sbjct: 60 RMLPTGVQLGMGVRPSAVS 78
>gi|90423517|ref|YP_531887.1| hypothetical protein RPC_2013 [Rhodopseudomonas palustris BisB18]
gi|90105531|gb|ABD87568.1| protein of unknown function DUF1078-like [Rhodopseudomonas
palustris BisB18]
Length = 464
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+S NIANA TP ++ D +SF +++ L E+ +
Sbjct: 24 ISGNIANAHTPGFKRID-TSFADLVSNQGPKRTLAGPVLAEARFT 67
>gi|330953723|gb|EGH53983.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
Length = 581
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A ++R ++ NIAN T +++ + F + L A H
Sbjct: 3 FNTAISGIQAANKRLEVAGNNIANVGTLGFKSSR-AQFSALYASAQLGAGQHAV------ 55
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGNTVGI 96
G ++ +Q V SGN + +
Sbjct: 56 --GDGVRLASVQQNFNQGETVISSGNALDM 83
>gi|331652130|ref|ZP_08353149.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
gi|331050408|gb|EGI22466.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|304404253|ref|ZP_07385915.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
YK9]
gi|304347231|gb|EFM13063.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
YK9]
Length = 272
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ ++ NIAN +T ++A + F+ IL+QN
Sbjct: 10 SGMRGFQTKLDVIGNNIANVNTVGFKAGRVM-FKDILSQNVAGVTA 54
>gi|300918679|ref|ZP_07135260.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
gi|300414173|gb|EFJ97483.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|218553655|ref|YP_002386568.1| flagellar basal body rod protein FlgF [Escherichia coli IAI1]
gi|218360423|emb|CAQ97977.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI1]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|218549195|ref|YP_002382986.1| flagellar basal body rod protein FlgF [Escherichia fergusonii
ATCC 35469]
gi|218356736|emb|CAQ89364.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia fergusonii ATCC 35469]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|168186142|ref|ZP_02620777.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C
str. Eklund]
gi|169295678|gb|EDS77811.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C
str. Eklund]
Length = 259
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 18 SERQKIVSENIANASTPNYRAKDI--SSFETIL 48
+Q ++S N+ANA+T Y+ D+ SF+ ++
Sbjct: 16 EAQQDVISNNLANATTVGYKKDDLVGKSFKDVM 48
>gi|170680164|ref|YP_001744103.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
gi|218704485|ref|YP_002412004.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
gi|293404361|ref|ZP_06648355.1| flgF [Escherichia coli FVEC1412]
gi|298380141|ref|ZP_06989746.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
gi|300899596|ref|ZP_07117835.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
gi|307310145|ref|ZP_07589795.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
gi|331662483|ref|ZP_08363406.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
gi|170517882|gb|ACB16060.1| flagellar basal-body rod protein FlgF [Escherichia coli SMS-3-5]
gi|218431582|emb|CAR12461.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli UMN026]
gi|291428947|gb|EFF01972.1| flgF [Escherichia coli FVEC1412]
gi|298279839|gb|EFI21347.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
gi|300356867|gb|EFJ72737.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
gi|306909863|gb|EFN40357.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
gi|315060355|gb|ADT74682.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli W]
gi|320200973|gb|EFW75557.1| Flagellar basal-body rod protein FlgF [Escherichia coli EC4100B]
gi|323379084|gb|ADX51352.1| flagellar basal-body rod protein FlgF [Escherichia coli KO11]
gi|331060905|gb|EGI32869.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|116250476|ref|YP_766314.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum
bv. viciae 3841]
gi|115255124|emb|CAK06198.1| putative flagella associated protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 244
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51
MQ + ++SQ A L +R +++N+AN +T +RA ++ F+ ++
Sbjct: 1 MQSGLYVSLSSQMA--LEKRLTTIADNMANVNTTGFRATEVK-FDEMVAAT 48
>gi|16129040|ref|NP_415595.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|89107923|ref|AP_001703.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. W3110]
gi|110805094|ref|YP_688614.1| flagellar basal body rod protein FlgF [Shigella flexneri 5 str.
8401]
gi|170080728|ref|YP_001730048.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|188495735|ref|ZP_03003005.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
gi|194438118|ref|ZP_03070211.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
gi|209918331|ref|YP_002292415.1| flagellar basal body rod protein FlgF [Escherichia coli SE11]
gi|218694611|ref|YP_002402278.1| flagellar basal body rod protein FlgF [Escherichia coli 55989]
gi|238900331|ref|YP_002926127.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|253773899|ref|YP_003036730.1| flagellar basal body rod protein FlgF [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161183|ref|YP_003044291.1| flagellar basal body rod protein FlgF [Escherichia coli B str.
REL606]
gi|256023225|ref|ZP_05437090.1| flagellar basal body rod protein FlgF [Escherichia sp. 4_1_40B]
gi|297517865|ref|ZP_06936251.1| flagellar basal body rod protein FlgF [Escherichia coli OP50]
gi|300821142|ref|ZP_07101291.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
gi|300902468|ref|ZP_07120450.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
gi|300950172|ref|ZP_07164117.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
gi|301029708|ref|ZP_07192762.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
gi|301304984|ref|ZP_07211086.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
gi|301644989|ref|ZP_07244955.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
gi|307137712|ref|ZP_07497068.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
gi|331641621|ref|ZP_08342756.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
gi|331667477|ref|ZP_08368341.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
gi|331676868|ref|ZP_08377564.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
gi|2494531|sp|P75938|FLGF_ECOLI RecName: Full=Flagellar basal-body rod protein flgF; AltName:
Full=Putative proximal rod protein
gi|1787317|gb|AAC74161.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. MG1655]
gi|4062655|dbj|BAA35886.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K12 substr. W3110]
gi|110614642|gb|ABF03309.1| flagellar basal-body rod protein FlgF [Shigella flexneri 5 str.
8401]
gi|169888563|gb|ACB02270.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli str. K-12 substr. DH10B]
gi|188490934|gb|EDU66037.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
gi|194423054|gb|EDX39048.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
gi|209911590|dbj|BAG76664.1| flagellar basal-body rod protein FlgF [Escherichia coli SE11]
gi|218351343|emb|CAU97049.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli 55989]
gi|238861103|gb|ACR63101.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BW2952]
gi|242376881|emb|CAQ31598.1| flagellar basal-body rod protein FlgF, subunit of Flagellar Motor
Complex and Flagellum [Escherichia coli BL21(DE3)]
gi|253324943|gb|ACT29545.1| flagellar basal-body rod protein FlgF [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973084|gb|ACT38755.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli B str. REL606]
gi|253977298|gb|ACT42968.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli BL21(DE3)]
gi|260449783|gb|ACX40205.1| flagellar basal-body rod protein FlgF [Escherichia coli DH1]
gi|299877396|gb|EFI85607.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
gi|300405500|gb|EFJ89038.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
gi|300450519|gb|EFK14139.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
gi|300526441|gb|EFK47510.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
gi|300839702|gb|EFK67462.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
gi|301076718|gb|EFK91524.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
gi|309701349|emb|CBJ00650.1| flagellar basal-body rod protein FlgF [Escherichia coli ETEC
H10407]
gi|315135709|dbj|BAJ42868.1| flagellar basal body rod protein FlgF [Escherichia coli DH1]
gi|315253878|gb|EFU33846.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 85-1]
gi|323937817|gb|EGB34081.1| flagellar basal-body rod protein FlgF [Escherichia coli E1520]
gi|323942546|gb|EGB38713.1| flagellar basal-body rod protein FlgF [Escherichia coli E482]
gi|323962676|gb|EGB58254.1| flagellar basal-body rod protein FlgF [Escherichia coli H489]
gi|323973334|gb|EGB68523.1| flagellar basal-body rod protein FlgF [Escherichia coli TA007]
gi|324017419|gb|EGB86638.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 117-3]
gi|331038419|gb|EGI10639.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
gi|331065062|gb|EGI36957.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
gi|331075557|gb|EGI46855.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
gi|332342623|gb|AEE55957.1| flagellar basal-body rod protein FlgF [Escherichia coli UMNK88]
Length = 251
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|253688971|ref|YP_003018161.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755549|gb|ACT13625.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 251
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 19 ERQKIVSENIANASTPNYRAK 39
E+Q I + N+ANASTP +RA+
Sbjct: 17 EKQAITANNLANASTPGFRAQ 37
>gi|255767784|ref|NP_391520.2| flagellar hook-basal body protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|254763418|sp|P39753|FLHP_BACSU RecName: Full=Flagellar hook-basal body complex protein flhP
gi|225185412|emb|CAB15656.2| putative flagellar hook-basal body protein [Bacillus subtilis
subsp. subtilis str. 168]
Length = 269
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
AS N L ++ +S N++N++T Y+AKD ++F ++ Q F
Sbjct: 7 TASTTLNQLQQQIDTISSNLSNSNTTGYKAKD-TNFSELVRQQF 49
>gi|163789641|ref|ZP_02184079.1| flagellar hook protein [Carnobacterium sp. AT7]
gi|159875173|gb|EDP69239.1| flagellar hook protein [Carnobacterium sp. AT7]
Length = 289
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
+ + ++S NIAN +T ++ + FE +L+Q A+T + +
Sbjct: 12 MKNIQTKMDVISNNIANVNTTAFKTGRVR-FEDMLSQTNASAQTGINAQQVGLGVQVGSI 70
Query: 74 AHVIEAPLDQTTGVQVS 90
V+ Q+TG +
Sbjct: 71 DTVMSGGSLQSTGRALD 87
>gi|144901061|emb|CAM77925.1| probable: Flagellar hook protein FlgE, gene: FLGE OR GSU0419
[Magnetospirillum gryphiswaldense MSR-1]
Length = 605
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+S+NI+N +T Y+ K+ + F+T+++++ TH L
Sbjct: 97 ISQNISNVNTTGYKRKE-TLFKTVMSESKAGPSTHSGKLN 135
>gi|295696121|ref|YP_003589359.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
gi|295411723|gb|ADG06215.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
Length = 265
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS- 68
A + ++ NIAN +T ++A + F +++Q A S+
Sbjct: 8 AVSGMRGFQTKMDVIGNNIANVNTVGFKASRVM-FHDLISQTLSGATAPGDTTGGSNPQQ 66
Query: 69 -GLHWNAHVIEAPLDQ--------TTGVQVSGN 92
GL I+ P+ T + + GN
Sbjct: 67 VGLGVGLASIDTPMTPGAPMMTGVPTDLAIDGN 99
>gi|209884526|ref|YP_002288383.1| flagellar basal-body rod protein FlgG [Oligotropha
carboxidovorans OM5]
gi|209872722|gb|ACI92518.1| flagellar basal-body rod protein FlgG [Oligotropha
carboxidovorans OM5]
Length = 262
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+++S NIAN T Y+ K ++SF+ +L ++ + G+ V
Sbjct: 19 QVISNNIANLRTTGYK-KQMASFQDLLYEHVQRVGAQASDQGTVLPVGIDIGGGVKTV 75
>gi|71023543|ref|XP_762001.1| hypothetical protein UM05854.1 [Ustilago maydis 521]
gi|74699289|sp|Q4P209|EAF11_USTMA RecName: Full=Chromatin modification-related protein EAF1; AltName:
Full=ESA1-associated factor 1; AltName: Full=Vacuolar
import and degradation protein 21
gi|46101566|gb|EAK86799.1| hypothetical protein UM05854.1 [Ustilago maydis 521]
Length = 1654
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 28/97 (28%), Gaps = 5/97 (5%)
Query: 17 LSERQKIVSENIANASTPNYRAKDI----SSFETILNQNFLMARTHETHLKESDSSGLHW 72
S R + +S+N+ +T AK++ F+ + TH T G
Sbjct: 602 RSYRHRTISDNVEQHNTDKLSAKEVVSSSQPFQAAAASLDDVEMTHSTSSSHIQKDGEPA 661
Query: 73 NAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYL 109
+ V + G + ++
Sbjct: 662 TVKAESGQPVEDADVTMDGGA-DADEAVTQAVESALQ 697
>gi|332298514|ref|YP_004440436.1| flagellar basal-body rod protein FlgG [Treponema brennaborense
DSM 12168]
gi|332181617|gb|AEE17305.1| flagellar basal-body rod protein FlgG [Treponema brennaborense
DSM 12168]
Length = 264
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART-------HETH 61
A+ N +S N++N +T Y+ + + FE ++ QN +A T
Sbjct: 7 TAATGMNGQQANIDAISNNLSNVNTTGYKQQRVE-FEDLIYQNLKLAGTPATEDTVTPVG 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ + +I Q TGV
Sbjct: 66 IQMGTGVKVGATQRIITQGSLQNTGVDTD 94
>gi|297183504|gb|ADI19634.1| flagellar hook protein flge [uncultured delta proteobacterium
HF0770_45N15]
Length = 494
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 32/81 (39%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+ +A+ + L E+ SSG A + + + V ++ E K +
Sbjct: 410 FDNAGKLAQLGDNLLVETLSSGKKVTGEPGTAGFGEIRSQMLEQSNVDLSLEFVKMIESQ 469
Query: 108 YLYELNTKLIKKLNSMVMHVV 128
++ N K + + M++ +V
Sbjct: 470 RAFQANAKTVTTSDEMIVDLV 490
>gi|304397206|ref|ZP_07379085.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
gi|308186395|ref|YP_003930526.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
gi|304355355|gb|EFM19723.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
gi|308056905|gb|ADO09077.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
Length = 260
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + +++ N+AN ST ++ + + FE ++ Q T + + + S
Sbjct: 7 IAKTGLDAQQMNMDVIANNLANVSTNGFK-RSRAVFEDLMYQTMRQPGTQSSE-QTTLPS 64
Query: 69 GLHWNAHVIEAPLDQ 83
GL V ++
Sbjct: 65 GLQIGTGVRPVTTER 79
>gi|299131785|ref|ZP_07024980.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
gi|298591922|gb|EFI52122.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
Length = 262
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEA 79
+++S NIAN T Y+ K ++SF+ +L ++ + G+ V
Sbjct: 19 QVISNNIANLRTTGYK-KQMASFQDLLYEHVQRVGAQASDQGTVLPVGIDIGGGVKTV 75
>gi|271500067|ref|YP_003333092.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
gi|270343622|gb|ACZ76387.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
Length = 251
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 19 ERQKIVSENIANASTPNYRAK----DISSFETILNQNFLMARTHETHLKESDSS----GL 70
E+Q + S N+ANASTP +RA+ + + N+ + + + + S G
Sbjct: 17 EQQAVTSHNMANASTPGFRAQLAAMRAVPIQGVTNETRTLVVSSTPGVDTTPGSMDYTGR 76
Query: 71 HWNAHVIEAPL------DQTTGVQVSGN 92
+ + + D + +GN
Sbjct: 77 SMDVALSQDGWLAVRAADGSEAYTRNGN 104
>gi|239906284|ref|YP_002953024.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
gi|239796149|dbj|BAH75138.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
Length = 518
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 26/68 (38%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
L + SG D G + + V + +E+ + ++ N+K++
Sbjct: 448 LSPTTESGKATVGRANSGVFDSIAGNTLESSNVDMASEMVNLIINQRAFQANSKVVTTAE 507
Query: 122 SMVMHVVR 129
S++ ++
Sbjct: 508 SLMETALQ 515
>gi|157164118|ref|YP_001467097.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
gi|112799948|gb|EAT97292.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
Length = 269
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 20 RQKIVSENIANASTPNYRAKDIS--SFETILNQN 51
R ++S N+AN +T Y+ D+ F I +
Sbjct: 18 RLNVISNNLANVNTIGYKRNDVVIGDFARIFKET 51
>gi|315296708|gb|EFU56003.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 16-3]
Length = 251
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|323341367|ref|ZP_08081611.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
25644]
gi|323091244|gb|EFZ33872.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
25644]
Length = 256
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M I+ N +VS N+AN T Y+ K ++F+ +LN T+
Sbjct: 1 MNMSQILSISRSGLNAYQHEMDVVSNNLANVDTLGYKDKR-TTFQELLNNG-----TNAN 54
Query: 61 HLKESDSSG 69
+ S ++G
Sbjct: 55 EVGLSQNAG 63
>gi|218700420|ref|YP_002408049.1| flagellar basal body rod protein FlgF [Escherichia coli IAI39]
gi|300938642|ref|ZP_07153371.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
gi|218370406|emb|CAR18213.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli IAI39]
gi|300456427|gb|EFK19920.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
Length = 251
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|26247217|ref|NP_753257.1| flagellar basal body rod protein FlgF [Escherichia coli CFT073]
gi|91210229|ref|YP_540215.1| flagellar basal body rod protein FlgF [Escherichia coli UTI89]
gi|117623263|ref|YP_852176.1| flagellar basal body rod protein FlgF [Escherichia coli APEC O1]
gi|227886565|ref|ZP_04004370.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
gi|237706937|ref|ZP_04537418.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
gi|300974381|ref|ZP_07172593.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
gi|301051139|ref|ZP_07197969.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
gi|26107618|gb|AAN79817.1|AE016759_91 Flagellar basal-body rod protein flgF [Escherichia coli CFT073]
gi|91071803|gb|ABE06684.1| flagellar basal-body rod protein FlgF [Escherichia coli UTI89]
gi|115512387|gb|ABJ00462.1| flagellar basal-body rod protein FlgF [Escherichia coli APEC O1]
gi|226898147|gb|EEH84406.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
gi|227836769|gb|EEJ47235.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
gi|294491134|gb|ADE89890.1| flagellar basal-body rod protein FlgF [Escherichia coli IHE3034]
gi|300297160|gb|EFJ53545.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
gi|300410624|gb|EFJ94162.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
gi|307553079|gb|ADN45854.1| flagellar basal-body rod protein FlgF [Escherichia coli ABU
83972]
gi|307627453|gb|ADN71757.1| flagellar basal body rod protein FlgF [Escherichia coli UM146]
gi|315287368|gb|EFU46779.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 110-3]
gi|315291071|gb|EFU50434.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 153-1]
gi|320196441|gb|EFW71064.1| Flagellar basal-body rod protein FlgF [Escherichia coli
WV_060327]
gi|323953237|gb|EGB49103.1| flagellar basal-body rod protein FlgF [Escherichia coli H252]
gi|323957901|gb|EGB53613.1| flagellar basal-body rod protein FlgF [Escherichia coli H263]
Length = 251
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|317121813|ref|YP_004101816.1| flagellar basal-body rod protein FlgC [Thermaerobacter
marianensis DSM 12885]
gi|315591793|gb|ADU51089.1| flagellar basal-body rod protein FlgC [Thermaerobacter
marianensis DSM 12885]
Length = 179
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 14/62 (22%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANAST-------------PNYRAKDISSFETILNQN 51
F IA+ R +++ N+AN T P ++ + + F +L +
Sbjct: 7 NTFDIAASGMTAQRLRLDLIASNLANVDTTRTAQGGPYRRLVPVFQER-VRPFAEVLRER 65
Query: 52 FL 53
Sbjct: 66 AA 67
>gi|290474973|ref|YP_003467857.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
bovienii SS-2004]
gi|289174290|emb|CBJ81080.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
[Xenorhabdus bovienii SS-2004]
Length = 251
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK 39
A A E Q + + N+ANASTP ++A+
Sbjct: 7 TAMGAARQTLEHQAVTANNLANASTPGFKAQ 37
>gi|213161842|ref|ZP_03347552.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 232
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|149183417|ref|ZP_01861850.1| FlhP [Bacillus sp. SG-1]
gi|148848862|gb|EDL63079.1| FlhP [Bacillus sp. SG-1]
Length = 278
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ N L ++ I+ N+AN+ T Y+ ++ E + Q + + + + +
Sbjct: 8 ATNTLNQLQKQMDIIGHNLANSDTNGYKRREAMFSELLFQQVSNLKGEKDANTRLTPGG 66
>gi|50120640|ref|YP_049807.1| flagellar basal body rod protein FlgF [Pectobacterium
atrosepticum SCRI1043]
gi|49611166|emb|CAG74612.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
SCRI1043]
Length = 251
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 19 ERQKIVSENIANASTPNYRAK 39
E+Q I + N+ANASTP +RA+
Sbjct: 17 EKQAITANNLANASTPGFRAQ 37
>gi|16126302|ref|NP_420866.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus
CB15]
gi|221235079|ref|YP_002517515.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus
NA1000]
gi|13637950|sp|Q06171|FLGF_CAUCR RecName: Full=Flagellar basal-body rod protein flgF
gi|13423542|gb|AAK24034.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus
CB15]
gi|220964251|gb|ACL95607.1| flagellar basal-body rod protein flgF [Caulobacter crescentus
NA1000]
Length = 245
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
S+ E IV+ NIANA+T ++ +D+ + +
Sbjct: 9 LSRQMTLRRE-LDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSP 57
>gi|333008281|gb|EGK27755.1| flagellar basal-body rod protein flgG [Shigella flexneri K-272]
gi|333019771|gb|EGK39043.1| flagellar basal-body rod protein flgG [Shigella flexneri K-227]
Length = 163
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|253997380|ref|YP_003049444.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
gi|253984059|gb|ACT48917.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
Length = 99
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 30/117 (25%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
N R + + NIAN ST N+ K++ + + T +K + +G
Sbjct: 8 SGMNAAQARLDVAANNIANLSTDNFTRKEV------VQADLPGGGTRVADIKSAAQAGS- 60
Query: 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ ++ + + Y N + K N M+M +
Sbjct: 61 -----------------------NLEADMVEQLQARNTYMTNLSVFKSNNDMLMGTI 94
>gi|222100099|ref|YP_002534667.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
4359]
gi|221572489|gb|ACM23301.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
4359]
Length = 268
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A+ + + ++ N+AN T Y+ K + F+ +L Q A T T + +G
Sbjct: 15 AATGMSAQQFKLDTIANNLANVDTTGYK-KVRAEFQDLLYQYVKNAGT-PTAATSTLPTG 72
Query: 70 LHWNAHVIEAPLDQTT---GVQVSGNTVGI 96
L+ V A + + +GN + +
Sbjct: 73 LYVGHGVRTAATTRIFTLGNFEQTGNALDL 102
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 23/65 (35%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
+ +SG + + + V + E+ + YE N+++I+ + M
Sbjct: 200 ATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYEFNSRVIQTADEM 259
Query: 124 VMHVV 128
+
Sbjct: 260 LRTAT 264
>gi|330501138|ref|YP_004378007.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina
NK-01]
gi|328915424|gb|AEB56255.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina
NK-01]
Length = 243
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
AS+ + L+ R + N+AN +TP +RA E HL ++G
Sbjct: 12 ASRTMSSLTVR----ANNLANVNTPGFRA----DLEQAQAVAVEGYGYDSRHLARVKNNG 63
Query: 70 LHWNAH 75
++
Sbjct: 64 VNLAPG 69
>gi|323976550|gb|EGB71638.1| flagellar basal-body rod protein FlgF [Escherichia coli TW10509]
Length = 251
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|315618247|gb|EFU98837.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
Length = 251
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|262396033|ref|YP_003287886.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
gi|262339627|gb|ACY53421.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
Length = 243
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+++SG E + G+ V + E+ + YE+N K++ +
Sbjct: 174 FRETEASGPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 233
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 234 DMLKFVSQ 241
>gi|296122946|ref|YP_003630724.1| hypothetical protein Plim_2702 [Planctomyces limnophilus DSM
3776]
gi|296015286|gb|ADG68525.1| protein of unknown function DUF1078 domain protein [Planctomyces
limnophilus DSM 3776]
Length = 256
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
+++Q A + RQ +++ N+AN T ++ DI+ F +
Sbjct: 7 LSAQGAESQAMRQGVLANNLANVGTNAFKP-DIAVFRSYF 45
>gi|170755157|ref|YP_001782254.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
str. Okra]
gi|169120369|gb|ACA44205.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
Okra]
Length = 263
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 24 VSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQ 83
+S N+AN +T Y+ +D+ SF+ ++ + + T + +G A Q
Sbjct: 22 ISNNLANVNTVGYKREDV-SFQELVQETLKRKG-YPTSDRPEIQTGTGVKATNWIRDTHQ 79
Query: 84 TTGVQVSGNTVGI--TNE---LYKSGHIKYLYELNTKLIKKLNSMV 124
+ +GN + + Y YE + + N M+
Sbjct: 80 QGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVDRNGML 125
>gi|167576662|ref|ZP_02369536.1| flagellar hook protein flgE [Burkholderia thailandensis TXDOH]
Length = 395
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F IA N ++ + +S NIAN++T ++A ++F T+ + + T++ +
Sbjct: 3 FNIALSGINAINSQLNTISHNIANSNTYGFKAGR-ANFATM----VAGTQANGTYIGSTT 57
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
S + P + + GN
Sbjct: 58 QSVGTRGGFL---PTGRALDGAIDGN 80
>gi|51598543|ref|YP_072731.1| flagellar hook protein FlgE [Borrelia garinii PBi]
gi|51573114|gb|AAU07139.1| flagellar hook protein [Borrelia garinii PBi]
Length = 442
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--- 60
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDSRGGTNPKQVG 68
Query: 61 -HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + +H GV +G
Sbjct: 69 LGMNVATIDTIHTQGAFQSTQKASDLGVSGNG 100
>gi|74311639|ref|YP_310058.1| flagellar basal body rod protein FlgF [Shigella sonnei Ss046]
gi|73855116|gb|AAZ87823.1| flagellar protein for cell-proximal portion of basal-body rod
[Shigella sonnei Ss046]
Length = 251
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|323174794|gb|EFZ60409.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
Length = 251
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|311033282|ref|ZP_07711372.1| hypothetical protein Bm3-1_22549 [Bacillus sp. m3-13]
Length = 280
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF----------LMARTHE 59
A+ N L ++ ++S N+AN T Y+ + +SF+ +L Q AR E
Sbjct: 8 ATNTMNQLQKQLDLISHNVANVDTVGYKQRS-ASFQELLAQQSNNQPLAQYDNQTARQSE 66
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ SGL + + T +
Sbjct: 67 LGIRVGSGSGLSKTQLHLTQGPMKATDRMLD 97
>gi|218887374|ref|YP_002436695.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758328|gb|ACL09227.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 145
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 38/144 (26%), Gaps = 19/144 (13%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YR-------AKDIS-SFET 46
M +T I + N I+S N+AN T YR A+DI F
Sbjct: 1 MDFMTAIDIGASALNAERTNMNIISMNLANVKTTRTEQGGPYRRKTTIMAAQDIDDPFAK 60
Query: 47 ILNQNF--LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSG 104
+ + H+ N V E+
Sbjct: 61 HMQGALDRELKGVRVMHVATDSRPLKRVYEPGHPDADQDGFVAYPDINVV---EEMASLM 117
Query: 105 HIKYLYELNTKLIKKLNSMVMHVV 128
+ YE N I + +M +
Sbjct: 118 TAQRGYEANVTTIDTVKAMYTKAL 141
>gi|310764859|gb|ADP09809.1| Flagellar basal-body rod protein FlgF [Erwinia sp. Ejp617]
Length = 245
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
A AN RQ + S N+ANA+T +RA+ +++F +
Sbjct: 7 TAMSAANAALNRQAVTSNNMANAATTGFRAQ-MAAFRAV 44
>gi|309788146|ref|ZP_07682752.1| flagellar basal-body rod flgG domain protein [Shigella
dysenteriae 1617]
gi|308923998|gb|EFP69499.1| flagellar basal-body rod flgG domain protein [Shigella
dysenteriae 1617]
Length = 82
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|283833629|ref|ZP_06353370.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
29220]
gi|291071312|gb|EFE09421.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
29220]
Length = 251
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|213421404|ref|ZP_03354470.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 197
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|30248324|ref|NP_840394.1| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC
19718]
gi|30138210|emb|CAD84218.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
Length = 260
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I+ + + +++ N+AN ST ++ + FE +L Q + + S
Sbjct: 7 ISKTGLDAQQTKMDVIANNLANISTNGFK-RMRPVFEDLLYQTIRQPGAQSSE-RTRLPS 64
Query: 69 GLHWNAHVIEAPLDQ---TTGVQVSGNT--VGITNE 99
GL V + +Q +GNT V I E
Sbjct: 65 GLQLGTGVRPVATENIFLQGNLQQTGNTRDVAIQGE 100
>gi|83944162|ref|ZP_00956618.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
gi|83845029|gb|EAP82910.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
Length = 261
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++ NIANA+T +++ ++F+ ++ Q+F A + +
Sbjct: 1 MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGR-AAFQDLVYQSFASAGSLTSEEG 59
Query: 64 ESDSSGLHWNAHVIEA 79
+ G V A
Sbjct: 60 TARPVGTDIGLGVQAA 75
>gi|307823529|ref|ZP_07653758.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
SV96]
gi|307735514|gb|EFO06362.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
SV96]
Length = 138
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 12/138 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI---------SSFETILNQN 51
M + F IA N S R +V+ NI+NA++ + A D+ + + ++N+
Sbjct: 1 MASSSIFDIAGSGMNAQSLRLNLVASNISNANSVSSSAADVYKSRQPVFAAELDKVINKQ 60
Query: 52 FLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYE 111
++ + + E + + A + + NTV E+ Y+
Sbjct: 61 NATSKVNVLGVVEGQDAPVMEYAPNHPMANSDGYIFKSNVNTV---EEMANMMSASRSYQ 117
Query: 112 LNTKLIKKLNSMVMHVVR 129
N ++ M++ ++
Sbjct: 118 NNVDVLNTAKQMMLQTLK 135
>gi|293409443|ref|ZP_06653019.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
gi|291469911|gb|EFF12395.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
Length = 251
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|256014942|ref|YP_003104951.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
gi|255997602|gb|ACU49289.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
Length = 262
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
+ IA+ N ++++ NIAN +T ++ + + F +L Q+ A
Sbjct: 1 MKALMIAATGMNAQQLNLEVIANNIANINTTGFK-RARAEFTDLLYQSERTAG 52
>gi|205353083|ref|YP_002226884.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205272864|emb|CAR37793.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|326628163|gb|EGE34506.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 260
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|86747251|ref|YP_483747.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
palustris HaA2]
gi|86570279|gb|ABD04836.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
palustris HaA2]
Length = 136
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 8/131 (6%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKD---ISSFETILNQNFLMART---- 57
+ IA + R ++ + N+AN + + + + +T
Sbjct: 3 SISAIAVSGLKAATRRLEVSASNVANQQSTGALPTANGAVPAGAPQAYTPLQVTQTAVPG 62
Query: 58 HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLI 117
T + ++ +AP +G+ + N V + EL KY Y N +
Sbjct: 63 SGTQTSVTPTTPGTIAIADPQAPFADESGMVAAPN-VDLAQELIGQMVAKYSYTANLATL 121
Query: 118 KKLNSMVMHVV 128
K M ++
Sbjct: 122 KADRDMTKALL 132
>gi|148259129|ref|YP_001233256.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum
JF-5]
gi|146400810|gb|ABQ29337.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum
JF-5]
Length = 485
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 31/85 (36%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
IAS + + ++ +VS+NIANA+T Y + + + + +
Sbjct: 7 LAIASSGLSAIDQQLAVVSQNIANANTSGYSVETANLSAATAGGQGSGVISAPATRQVNT 66
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG 91
S N + + +SG
Sbjct: 67 SIQTQVNNSIAQQSYQAVISTTLSG 91
>gi|120554033|ref|YP_958384.1| hypothetical protein Maqu_1105 [Marinobacter aquaeolei VT8]
gi|120323882|gb|ABM18197.1| protein of unknown function DUF1078 domain protein [Marinobacter
aquaeolei VT8]
Length = 637
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
F S + NIANAST +++ + F + FL A T+
Sbjct: 3 FNTGLSGLRAASVDLDVTGNNIANASTVGFKSSKVQ-FGDLYASGFLSAGTNP 54
>gi|294013087|ref|YP_003546547.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum
UT26S]
gi|292676417|dbj|BAI97935.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum
UT26S]
Length = 246
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRA 38
A RQ +S N+AN +T +RA
Sbjct: 4 LVNTALTAMRGAMARQAAISNNLANVNTTGFRA 36
>gi|237731008|ref|ZP_04561489.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2]
gi|226906547|gb|EEH92465.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2]
Length = 251
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|302392387|ref|YP_003828207.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
5501]
gi|302204464|gb|ADL13142.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
5501]
Length = 557
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ ++ NI+N +T Y+ ++ F+ +LNQ A
Sbjct: 10 SGLKAHQTKMDVIGNNISNVNTTGYKGSRVT-FKEMLNQTMEGASA 54
>gi|296103609|ref|YP_003613755.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058068|gb|ADF62806.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 260
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA ++S N+AN +T ++ + + F+ +L QN T + + S
Sbjct: 7 IAKTGLEAQQLNMDVISNNLANVNTNGFKRQR-AVFQDLLYQNMRQPGAQSTE-QNTLPS 64
Query: 69 GLHWNAHVIEAPLDQTT---GVQVSGN--TVGITNE 99
GL V + G+ +G+ V I E
Sbjct: 65 GLQLGTGVRPVSTQRVHTQGGMNQTGDEYDVAIEGE 100
>gi|270262400|ref|ZP_06190671.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
gi|270043084|gb|EFA16177.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
Length = 251
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK 39
A A E+Q + + N+ANASTP +RA+
Sbjct: 7 TAMGAARQTLEQQSVTANNLANASTPGFRAQ 37
>gi|300024606|ref|YP_003757217.1| flagellar basal-body rod protein FlgG [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526427|gb|ADJ24896.1| flagellar basal-body rod protein FlgG [Hyphomicrobium
denitrificans ATCC 51888]
Length = 262
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 13/100 (13%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART------ 57
+ IA+ + ++++ N+AN +T ++ + + F +L Q A T
Sbjct: 1 MRALSIAATGMSAQQTNVEVIANNVANINTTGFK-RARAEFTDLLYQTDRAAGTLARDDD 59
Query: 58 ------HETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
++ L + H + AP + + G
Sbjct: 60 TMIPEGNQIGLGVRTVAIRHLSMQGALAPTSNKLDLALDG 99
>gi|228984828|ref|ZP_04145000.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775026|gb|EEM23420.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 137
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+++ + ++K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDRSP----ANGVNIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|218230982|ref|YP_002366429.1| flagellar basal body rod protein FlgC [Bacillus cereus B4264]
gi|218158939|gb|ACK58931.1| flagellar basal-body rod protein FlgC [Bacillus cereus B4264]
Length = 137
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDG----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANKEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|86747891|ref|YP_484387.1| flagellar hook protein FlgE [Rhodopseudomonas palustris HaA2]
gi|86570919|gb|ABD05476.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 421
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M A N S ++S+NIAN+ST Y+ +SFE+++ +
Sbjct: 1 MSLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSS-ASFESLVTNTSGASSYSSG 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ S +S + + +Q +G
Sbjct: 60 GVTASATSNITTQGLLTSTTTATNIAIQGNG 90
>gi|312147981|gb|ADQ30640.1| flagellar hook protein FlgE [Borrelia burgdorferi JD1]
Length = 442
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|300854216|ref|YP_003779200.1| putative flagellar hook protein FlgE [Clostridium ljungdahlii DSM
13528]
gi|300434331|gb|ADK14098.1| predicted flagellar hook protein FlgE [Clostridium ljungdahlii
DSM 13528]
Length = 323
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-MARTHETHL 62
+ A ++ + S+NIAN+ST +++K++ FE +L+QN + + L
Sbjct: 2 LPSLYTAISGLRVNQQKLNVTSDNIANSSTTGFKSKNMI-FEDMLSQNLSDPSAPVDGGL 60
Query: 63 KESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
++ V D T G + N
Sbjct: 61 GGINARQSGLGVKVAGINTDFTAGSSQTTN 90
>gi|223040442|ref|ZP_03610716.1| flagellar basal-body rod protein FlgC [Campylobacter rectus
RM3267]
gi|222878292|gb|EEF13399.1| flagellar basal-body rod protein FlgC [Campylobacter rectus
RM3267]
Length = 165
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANAST-------PNYRAKDI----SSFETILNQNF 52
++ F I+ + R ++S NIANA+T P YR +++ F+++LN
Sbjct: 5 LSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGGP-YRRREVIFKAVDFDSVLNDEV 63
Query: 53 L 53
Sbjct: 64 A 64
>gi|319648038|ref|ZP_08002255.1| FlhP protein [Bacillus sp. BT1B_CT2]
gi|317389673|gb|EFV70483.1| FlhP protein [Bacillus sp. BT1B_CT2]
Length = 271
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
AS L ++ +S N+AN T Y+AK+ +SF ++ Q + S +
Sbjct: 3 TASNTMFELQKQIDNISHNLANTDTTGYKAKN-TSFSELIRQQIEQVNEKNNEVAASRKT 61
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
V D+ T Q S
Sbjct: 62 PPGLRLGVGAVMTDRLTHKQGS 83
>gi|77464904|ref|YP_354408.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
2.4.1]
gi|77389322|gb|ABA80507.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides
2.4.1]
Length = 261
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 18/113 (15%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ QIA+ + R ++S N+AN ST Y A+ + F + H +
Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARR-ADFADL-------------HYQ 46
Query: 64 ESDSSGL--HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
++ G + ++ + GV+ S +V ++ + +L
Sbjct: 47 QAVRPGTVSAEDGRMLPTGVQLGMGVRPSAVSVVLSQ--GALAQTRGDLDLAI 97
>gi|302390533|ref|YP_003826354.1| flagellar basal-body rod protein FlgG [Thermosediminibacter
oceani DSM 16646]
gi|302201161|gb|ADL08731.1| flagellar basal-body rod protein FlgG [Thermosediminibacter
oceani DSM 16646]
Length = 268
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 10/95 (10%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
AS ++S N+AN +T Y+ + F+ +L + + +
Sbjct: 8 ASSGMLAQQLNVDVISNNLANVNTTGYKKSRVE-FKDLLYETLR----RPDVFQPGQGNP 62
Query: 70 LHWNAHVIEAPLDQT-----TGVQVSGNTVGITNE 99
+ P T +Q +GNT + E
Sbjct: 63 VGLQVGHGVRPASTTRFFTEGNLQQTGNTFDLAIE 97
>gi|298507071|gb|ADI85794.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
KN400]
Length = 477
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNY 36
M ++ IA ++ SENI N +TP Y
Sbjct: 1 MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGY 36
>gi|268317781|ref|YP_003291500.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
4252]
gi|262335315|gb|ACY49112.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
4252]
Length = 262
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ + A+ N ++ N+ANA+T ++ + F+ +L Q E
Sbjct: 2 LRALRTAALGMNAQQTNVDNIAHNLANANTTGFKNARVV-FQDLLYQTVQTPGQEEAEGL 60
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQV--SGNTVGI 96
+S + + A + Q T + +GN + +
Sbjct: 61 TPPASLQLGSGVAVVATVRQFTQGSLVETGNALDL 95
>gi|259907635|ref|YP_002647991.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
gi|224963257|emb|CAX54741.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
gi|283477477|emb|CAY73393.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM
12163]
Length = 245
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
A AN RQ + S N+ANA+T +RA+ +++F +
Sbjct: 7 TAMSAANAALNRQAVTSNNMANAATTGFRAQ-MAAFRAV 44
>gi|121997318|ref|YP_001002105.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
SL1]
gi|121588723|gb|ABM61303.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
SL1]
Length = 246
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSF 44
+A A E Q ++N+ANASTP +RA D+ SF
Sbjct: 7 VAMTGAKHSLEAQHHNNQNLANASTPGFRA-DLDSF 41
>gi|83955138|ref|ZP_00963794.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp.
NAS-14.1]
gi|83840467|gb|EAP79640.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp.
NAS-14.1]
Length = 261
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ IA+ +++ NIANA+T +++ ++F+ ++ Q+F A + +
Sbjct: 1 MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGR-AAFQDLVYQSFASAGSLTSEEG 59
Query: 64 ESDSSGLHWNAHVIEA 79
+ G V A
Sbjct: 60 TARPVGTDIGLGVQAA 75
>gi|313682110|ref|YP_004059848.1| flagellar basal-body rod protein flgg [Sulfuricurvum kujiense DSM
16994]
gi|313154970|gb|ADR33648.1| flagellar basal-body rod protein FlgG [Sulfuricurvum kujiense DSM
16994]
Length = 262
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 25 SENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+ NIAN +T Y+ K + F ++ + A T + +S +
Sbjct: 23 ANNIANVNTMGYK-KSRAEFADLMYKVMTYAGTSTSDTTKSPTG 65
>gi|291617022|ref|YP_003519764.1| FlgG [Pantoea ananatis LMG 20103]
gi|291152052|gb|ADD76636.1| FlgG [Pantoea ananatis LMG 20103]
gi|327393473|dbj|BAK10895.1| flagellar basal-body rod protein FlgG [Pantoea ananatis AJ13355]
Length = 260
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + +++ N+AN ST ++ + + FE ++ Q T + + + S
Sbjct: 7 IAKTGLDAQQMNMDVIANNLANVSTNGFK-RSRAVFEDLMYQTMRQPGTQSSE-QTTLPS 64
Query: 69 GLHWNAHVIEAPLDQ 83
GL V ++
Sbjct: 65 GLQIGTGVRPVTTER 79
>gi|204930805|ref|ZP_03221678.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204320264|gb|EDZ05468.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
Length = 260
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|163738039|ref|ZP_02145455.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
BS107]
gi|161388655|gb|EDQ13008.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
BS107]
Length = 440
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 18 SERQKIVSENIANASTPNYR 37
+ R +S+NIANASTP Y+
Sbjct: 25 ASRLASISDNIANASTPGYK 44
>gi|160901817|ref|YP_001567398.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
gi|160359461|gb|ABX31075.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
Length = 261
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
A+ N + I+S N+AN T Y+ K + F+ +L + A T
Sbjct: 8 AATGMNAEQRKLDIISNNLANVDTTGYK-KQRAEFQDLLYSSVKEAGT 54
>gi|52785608|ref|YP_091437.1| flagellar basal body rod protein FlgG [Bacillus licheniformis
ATCC 14580]
gi|163119437|ref|YP_079022.2| flagellar basal body rod protein FlgG [Bacillus licheniformis
ATCC 14580]
gi|319645990|ref|ZP_08000220.1| FlgE protein [Bacillus sp. BT1B_CT2]
gi|52348110|gb|AAU40744.1| FlgE [Bacillus licheniformis ATCC 14580]
gi|145902944|gb|AAU23384.2| flagellar hook protein [Bacillus licheniformis ATCC 14580]
gi|317391740|gb|EFV72537.1| FlgE protein [Bacillus sp. BT1B_CT2]
Length = 263
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLH 71
+ +V+ NI+N +T Y+ ++ F+ I++Q A + + + +
Sbjct: 10 SGMKNFQTKLDVVANNISNINTAGYKKSRVT-FKDIVSQQLSGASSSTANRGSVNGQQVG 68
Query: 72 WNAHV 76
A +
Sbjct: 69 LGATI 73
>gi|39998134|ref|NP_954085.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
PCA]
gi|39985080|gb|AAR36435.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
PCA]
Length = 477
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNY 36
M ++ IA ++ SENI N +TP Y
Sbjct: 1 MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGY 36
>gi|37525842|ref|NP_929186.1| flagellar basal-body rod protein FlgF (putative proximal rod
protein) [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785271|emb|CAE14212.1| Flagellar basal-body rod protein FlgF (Putative proximal rod
protein) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 251
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP ++A+
Sbjct: 19 QAVTANNLANASTPGFKAQ 37
>gi|307293786|ref|ZP_07573630.1| flagellar basal-body rod protein FlgF [Sphingobium
chlorophenolicum L-1]
gi|306879937|gb|EFN11154.1| flagellar basal-body rod protein FlgF [Sphingobium
chlorophenolicum L-1]
Length = 246
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 6 FFQIASQHANWLSERQKIVSENIANASTPNYRA 38
A RQ +S N+AN +T +RA
Sbjct: 4 LVNTALTAMRGAMARQAAISNNLANVNTTGFRA 36
>gi|296282278|ref|ZP_06860276.1| flagellar basal-body rod protein FlgF [Citromicrobium
bathyomarinum JL354]
Length = 246
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
A +RQ+ ++ N+AN T +RA
Sbjct: 7 TALSGMQASMDRQRAIASNMANTDTLGFRA 36
>gi|256833243|ref|YP_003161970.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
gi|256686774|gb|ACV09667.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
Length = 134
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 9/124 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M IAS + VS+N+AN +T R D +F+ A
Sbjct: 1 MTTFGAIGIASTGLTVNRKWLDAVSDNLANVNT--VRPTDEEAFQARY--VIAQAAGGPR 56
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLYELNTK 115
+ +G+ + + + G V +++++ + + Y+ +T
Sbjct: 57 DTAGTQVAGIELGSAEGRLVYEPDHPLADEGGYVRYPDIDLSSQMSQLIMAQRGYQASTA 116
Query: 116 LIKK 119
++++
Sbjct: 117 VVER 120
>gi|156934438|ref|YP_001438354.1| flagellar basal body rod protein FlgG [Cronobacter sakazakii ATCC
BAA-894]
gi|156532692|gb|ABU77518.1| hypothetical protein ESA_02269 [Cronobacter sakazakii ATCC
BAA-894]
Length = 260
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|119477951|ref|ZP_01618051.1| Flagellar basal body rod protein [marine gamma proteobacterium
HTCC2143]
gi|119448864|gb|EAW30106.1| Flagellar basal body rod protein [marine gamma proteobacterium
HTCC2143]
Length = 261
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
I+ + R +S N+ANA+T Y+ +D FE +L Q +
Sbjct: 7 ISKTGLSAQDTRLATISNNLANAATVGYK-RDSVVFEDLLYQIRRQPGAQSS 57
>gi|158320521|ref|YP_001513028.1| hypothetical protein Clos_1488 [Alkaliphilus oremlandii OhILAs]
gi|158140720|gb|ABW19032.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
oremlandii OhILAs]
Length = 448
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-RTHETHLKESDSS 68
A + ++ NIAN +T ++ ++ F+ + +Q A R E ++
Sbjct: 8 AVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVT-FQEVFSQTLRGAGRAQEGGRGGTNPQ 66
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
+ +V T G S
Sbjct: 67 QVGLGINVNSMDTFHTRGSVES 88
>gi|83594184|ref|YP_427936.1| hypothetical protein Rru_A2852 [Rhodospirillum rubrum ATCC 11170]
gi|83577098|gb|ABC23649.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 727
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+VS N+AN +TP Y K + +LN + + +T
Sbjct: 23 LVSHNLANINTPGYTRKIFNPESVVLNGSGVGVQT 57
>gi|312962289|ref|ZP_07776780.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
WH6]
gi|311283216|gb|EFQ61806.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
WH6]
Length = 678
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNY 36
++ I N ++S NIAN +TP Y
Sbjct: 1 MSLLNIGMSGLNAAQGSLSVLSNNIANVNTPGY 33
>gi|238755322|ref|ZP_04616665.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC
29473]
gi|238706458|gb|EEP98832.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC
29473]
Length = 260
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + +++ N+AN ST ++ + + FE +L Q + + + S
Sbjct: 7 IAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTMRQPGAQSSE-QTTLPS 64
Query: 69 GLHWNAHVIEAPLDQ 83
GL V ++
Sbjct: 65 GLQIGTGVRPVATER 79
>gi|224417697|ref|ZP_03655703.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
98-5491]
gi|253827046|ref|ZP_04869931.1| flagellar basal body rod protein [Helicobacter canadensis MIT
98-5491]
gi|313141240|ref|ZP_07803433.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
98-5491]
gi|253510452|gb|EES89111.1| flagellar basal body rod protein [Helicobacter canadensis MIT
98-5491]
gi|313130271|gb|EFR47888.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
98-5491]
Length = 166
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 49/162 (30%), Gaps = 40/162 (24%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDIS----SFETILNQN-- 51
++ F I+ + +R ++S NIANA+T YR +++ F+ +LNQ
Sbjct: 3 LSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGGPYRRRELILKAFDFDKVLNQKYQ 62
Query: 52 ------------FLMARTHETH-------------LKESDSSGLHWNAHVIEAPLDQTTG 86
M +E + DS +
Sbjct: 63 KSNNLLKYEDPLDEMDSFNEQREPKPALMSVYVDKIVRDDSQPKMKYEPNHPDANSEGYV 122
Query: 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVV 128
+ N V E+ Y+ N + +M + +
Sbjct: 123 AYPNINAVV---EMADLIEATKAYQANVAAFQSAKNMANNAI 161
>gi|212709493|ref|ZP_03317621.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens
DSM 30120]
gi|212687831|gb|EEB47359.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens
DSM 30120]
Length = 251
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAK 39
A A E Q IVS NIAN ST ++A+
Sbjct: 7 TAMGGARHALENQSIVSNNIANVSTAGFKAQ 37
>gi|188997558|ref|YP_001931809.1| flagellar basal body rod protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932625|gb|ACD67255.1| flagellar basal body rod protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 236
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYR 37
QPI + A +E+ + NIAN++TP ++
Sbjct: 5 FQPIYILASGGERA---TEQLDTTTNNIANSNTPGFK 38
>gi|126653431|ref|ZP_01725527.1| flagellar hook-basal body protein [Bacillus sp. B14905]
gi|126589787|gb|EAZ83920.1| flagellar hook-basal body protein [Bacillus sp. B14905]
Length = 125
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52
A+ L + +S NIAN++T ++AK+ +SF +L Q F
Sbjct: 7 TATNTMGQLQNKLDTISNNIANSNTTGFKAKE-ASFNELLYQQF 49
>gi|332533169|ref|ZP_08409038.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037451|gb|EGI73905.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
haloplanktis ANT/505]
Length = 667
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
IAS SE + S+NIAN +T Y ++ + F T+++ T
Sbjct: 4 NLLNIASSGVRASSELLQTTSKNIANVNTEGYV-RERTEFTTMVDNQVGRGET 55
>gi|219684598|ref|ZP_03539541.1| flagellar hook protein FlgE [Borrelia garinii PBr]
gi|219671960|gb|EED29014.1| flagellar hook protein FlgE [Borrelia garinii PBr]
Length = 442
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--- 60
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDSRGGTNPKQVG 68
Query: 61 -HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + +H GV +G
Sbjct: 69 LGMNVATIDTIHTQGAFQSTQKASDLGVSGNG 100
>gi|87306343|ref|ZP_01088490.1| flagellar hook basal body protein flgG [Blastopirellula marina
DSM 3645]
gi|87290522|gb|EAQ82409.1| flagellar hook basal body protein flgG [Blastopirellula marina
DSM 3645]
Length = 266
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHL 62
+ A+ L + ++S N+AN +T ++ KD +FE + N ++ +
Sbjct: 2 SVQTLYTAATGMQTLQTKLDVISNNLANVNTTAFK-KDRINFEDLFYDNRVLPGKLDGSS 60
Query: 63 KESDSSGLHWNAHVIEAPLDQTTG 86
+ + G H V
Sbjct: 61 NPTPT-GTHIGMGVRVQSTQTDYQ 83
>gi|224533123|ref|ZP_03673723.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
gi|224511850|gb|EEF82251.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
gi|312149691|gb|ADQ29762.1| flagellar hook protein FlgE [Borrelia burgdorferi N40]
Length = 442
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|216264643|ref|ZP_03436635.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
gi|215981116|gb|EEC21923.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
Length = 442
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|32477363|ref|NP_870357.1| FlgF [Rhodopirellula baltica SH 1]
gi|32447914|emb|CAD77434.1| FlgF [Rhodopirellula baltica SH 1]
gi|327537336|gb|EGF24069.1| Flagellar basal-body rod FlgF [Rhodopirellula baltica WH47]
Length = 273
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRA 38
+++ A + R + +S N+AN TP ++
Sbjct: 30 LSAAGAQAQNHRLQQISHNLANVDTPGFKP 59
>gi|15594628|ref|NP_212417.1| flagellar hook protein FlgE [Borrelia burgdorferi B31]
gi|223889009|ref|ZP_03623600.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
gi|226321601|ref|ZP_03797127.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
gi|2494528|sp|Q44767|FLGE_BORBU RecName: Full=Flagellar hook protein flgE
gi|1165267|gb|AAA85606.1| FlgE [Borrelia burgdorferi]
gi|2688183|gb|AAC66665.1| flagellar hook protein (flgE) [Borrelia burgdorferi B31]
gi|223885825|gb|EEF56924.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
gi|226232790|gb|EEH31543.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
Length = 442
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|89068728|ref|ZP_01156114.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
HTCC2516]
gi|89045691|gb|EAR51753.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
HTCC2516]
Length = 432
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 17/112 (15%)
Query: 18 SERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVI 77
+R + S +AN S P + + K S +SG
Sbjct: 335 GQRMSLFSLPVANVSNP-----------------EGLVAGNGNAYKLSRASGAMTLGIAG 377
Query: 78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129
+ G+ V I EL + Y N K++ + M+ R
Sbjct: 378 GGGTASIYAGALEGSNVDIAEELTDLIATQRAYSTNAKVVTTADEMLDETTR 429
>gi|254227985|ref|ZP_04921415.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
gi|151939481|gb|EDN58309.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
Length = 261
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLN 121
+E+++SG E + G+ V + E+ + YE+N K++ +
Sbjct: 192 FRETEASGPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251
Query: 122 SMVMHVVR 129
M+ V +
Sbjct: 252 DMLKFVSQ 259
>gi|195941363|ref|ZP_03086745.1| flagellar hook protein FlgE [Borrelia burgdorferi 80a]
gi|221217779|ref|ZP_03589247.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
gi|224533707|ref|ZP_03674295.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
gi|225549062|ref|ZP_03770037.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
gi|225550122|ref|ZP_03771082.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
gi|226320584|ref|ZP_03796144.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
gi|221192456|gb|EEE18675.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
gi|224513000|gb|EEF83363.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
gi|225369234|gb|EEG98687.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
gi|225370288|gb|EEG99726.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
gi|226234003|gb|EEH32724.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
Length = 442
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|218249383|ref|YP_002374806.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
gi|218164571|gb|ACK74632.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
Length = 442
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|86157813|ref|YP_464598.1| hypothetical protein Adeh_1387 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774324|gb|ABC81161.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 428
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M +T + S +V +NIANA+T +++ ++FE L+Q + + +
Sbjct: 1 MSLLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGR-AAFEDALSQTV-IGGSGQV 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + A T + + GN
Sbjct: 59 GLGARLAGVQKILTQGALASTGLATDLALQGN 90
>gi|295097205|emb|CBK86295.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 134
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDISSFETILNQNFLM 54
M + F I+ S+R + + N+ANA + P+ YRA+ + FE + +
Sbjct: 1 MSLFSVFDISGSAMAAQSKRLNVSASNMANADSVAGPDGQPYRARQVM-FEADTSAGQGI 59
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ + ES + +Q V + NE+ + Y+ N
Sbjct: 60 GGVRVSDVVESTAPDRLVYEPGNPLADEQGYVRMP---NVNVVNEMVNTISASRSYQANV 116
Query: 115 KLIKKLNSMVMHVVR 129
+++ +++ +
Sbjct: 117 EVMNSARALMQKTLT 131
>gi|316932791|ref|YP_004107773.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
palustris DX-1]
gi|315600505|gb|ADU43040.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
palustris DX-1]
Length = 623
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59
IA +VS N+ANA TP Y K ++ T+ Q + +
Sbjct: 7 LSIAMAGLRVNQASMSLVSSNVANAETPGYVRKTVNQGVTVSGQTGTGVQVNG 59
>gi|237755436|ref|ZP_04584061.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692400|gb|EEP61383.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 236
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYR 37
QPI + A +E+ + NIAN++TP ++
Sbjct: 5 FQPIYILASGGERA---TEQLDTTTNNIANSNTPGFK 38
>gi|157363239|ref|YP_001470006.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
gi|157313843|gb|ABV32942.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
Length = 261
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 24/64 (37%)
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
E+ +SG + + V + E+ + YELN + I+ ++M
Sbjct: 193 ETTASGEPIEGTPNQDGFGALQQGYLEKANVDVVKEMVDMITAQRAYELNARAIQTADNM 252
Query: 124 VMHV 127
+ V
Sbjct: 253 LQTV 256
>gi|157146225|ref|YP_001453544.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
BAA-895]
gi|157083430|gb|ABV13108.1| hypothetical protein CKO_01982 [Citrobacter koseri ATCC BAA-895]
Length = 251
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|313650476|gb|EFS14883.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
2457T]
gi|332758232|gb|EGJ88555.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
gi|332759647|gb|EGJ89952.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
gi|332761418|gb|EGJ91702.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
gi|332767680|gb|EGJ97873.1| flagella basal body rod family protein [Shigella flexneri
2930-71]
gi|333004882|gb|EGK24402.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
gi|333005639|gb|EGK25157.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
gi|333019455|gb|EGK38738.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
gi|333019765|gb|EGK39037.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
Length = 90
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST---PN---YRAKDI 41
M + F IA S+R + + N+ANA + P+ YRAK +
Sbjct: 1 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQV 47
>gi|307627452|gb|ADN71756.1| flagellar basal body rod protein FlgG [Escherichia coli UM146]
Length = 260
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|292489132|ref|YP_003532019.1| flagellar basal-body rod protein FlgF [Erwinia amylovora
CFBP1430]
gi|292900251|ref|YP_003539620.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291200099|emb|CBJ47225.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
gi|291554566|emb|CBA22179.1| Flagellar basal-body rod protein flgF [Erwinia amylovora
CFBP1430]
gi|312173290|emb|CBX81545.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC
BAA-2158]
Length = 245
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI 47
A AN RQ + S N+ANA+T +RA+ +++F +
Sbjct: 7 TAMSAANAALNRQAVTSNNMANAATTGFRAQ-MAAFRAV 44
>gi|260597447|ref|YP_003210018.1| flagellar basal body rod protein FlgG [Cronobacter turicensis
z3032]
gi|260216624|emb|CBA29921.1| Flagellar basal-body rod protein flgG [Cronobacter turicensis
z3032]
Length = 260
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|229096230|ref|ZP_04227203.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
gi|229102343|ref|ZP_04233051.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
gi|229115185|ref|ZP_04244595.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
gi|228668325|gb|EEL23757.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
gi|228680990|gb|EEL35159.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
gi|228687190|gb|EEL41095.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
Length = 137
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFASMLDG----APTNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|219685755|ref|ZP_03540566.1| flagellar hook protein FlgE [Borrelia garinii Far04]
gi|219672694|gb|EED29722.1| flagellar hook protein FlgE [Borrelia garinii Far04]
Length = 442
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--- 60
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDSRGGTNPKQVG 68
Query: 61 -HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
+ + +H GV +G
Sbjct: 69 LGMNVATIDTIHTQGAFQSTQKASDLGVSGNG 100
>gi|52787553|ref|YP_093382.1| FlhP [Bacillus licheniformis ATCC 14580]
gi|163119681|ref|YP_080952.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
14580]
gi|52350055|gb|AAU42689.1| FlhP [Bacillus licheniformis ATCC 14580]
gi|145903191|gb|AAU25314.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
14580]
Length = 275
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
AS L ++ +S N+AN T Y+AK+ +SF ++ Q + S +
Sbjct: 7 TASNTMFELQKQIDNISHNLANTDTTGYKAKN-TSFSELIRQQIEQVNEKNNEVAASRKT 65
Query: 69 GLHWNAHVIEAPLDQTTGVQVS 90
V D+ T Q S
Sbjct: 66 PPGLRLGVGAVMTDRLTHKQGS 87
>gi|17989431|ref|NP_542064.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
str. 16M]
gi|23499916|ref|NP_699356.1| flagellar basal body rod protein FlgG [Brucella suis 1330]
gi|62317103|ref|YP_222956.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 1
str. 9-941]
gi|83269095|ref|YP_418386.1| flagellar basal body rod protein FlgG [Brucella melitensis biovar
Abortus 2308]
gi|148557926|ref|YP_001257213.1| flagellar basal body rod protein FlgG [Brucella ovis ATCC 25840]
gi|161620236|ref|YP_001594122.1| flagellar basal body rod protein FlgG [Brucella canis ATCC 23365]
gi|163844346|ref|YP_001622001.1| flagellar basal body rod protein FlgG [Brucella suis ATCC 23445]
gi|189022368|ref|YP_001932109.1| flagellar basal body rod protein FlgG [Brucella abortus S19]
gi|225628625|ref|ZP_03786659.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
gi|237816665|ref|ZP_04595657.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
A]
gi|254691412|ref|ZP_05154666.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 6
str. 870]
gi|254695290|ref|ZP_05157118.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 3
str. Tulya]
gi|254702576|ref|ZP_05164404.1| flagellar basal body rod protein FlgG [Brucella suis bv. 3 str.
686]
gi|254706292|ref|ZP_05168120.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
M163/99/10]
gi|254711414|ref|ZP_05173225.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
B2/94]
gi|254720610|ref|ZP_05182421.1| flagellar basal body rod protein FlgG [Brucella sp. 83/13]
gi|254731833|ref|ZP_05190411.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 4
str. 292]
gi|256029956|ref|ZP_05443570.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
M292/94/1]
gi|256043073|ref|ZP_05446017.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
str. Rev.1]
gi|256059608|ref|ZP_05449806.1| flagellar basal body rod protein FlgG [Brucella neotomae 5K33]
gi|256111943|ref|ZP_05452894.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 3
str. Ether]
gi|256158118|ref|ZP_05456036.1| flagellar basal body rod protein FlgG [Brucella ceti M490/95/1]
gi|256252928|ref|ZP_05458464.1| flagellar basal body rod protein FlgG [Brucella ceti B1/94]
gi|256256598|ref|ZP_05462134.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 9
str. C68]
gi|260544341|ref|ZP_05820162.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
gi|260564303|ref|ZP_05834788.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
16M]
gi|260568516|ref|ZP_05838985.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
gi|260757026|ref|ZP_05869374.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6
str. 870]
gi|260759602|ref|ZP_05871950.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4
str. 292]
gi|260882836|ref|ZP_05894450.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9
str. C68]
gi|261215659|ref|ZP_05929940.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3
str. Tulya]
gi|261220019|ref|ZP_05934300.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
gi|261313736|ref|ZP_05952933.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
M163/99/10]
gi|261319022|ref|ZP_05958219.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
B2/94]
gi|261323577|ref|ZP_05962774.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
gi|261753156|ref|ZP_05996865.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
686]
gi|265985650|ref|ZP_06098385.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
gi|265986975|ref|ZP_06099532.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
M292/94/1]
gi|265989511|ref|ZP_06102068.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
str. Rev.1]
gi|265993390|ref|ZP_06105947.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
str. Ether]
gi|265996635|ref|ZP_06109192.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
gi|297249954|ref|ZP_06933655.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5
str. B3196]
gi|306838572|ref|ZP_07471409.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
gi|306841049|ref|ZP_07473773.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
gi|17985308|gb|AAL54328.1| flagellar basal-body rod protein flgg [Brucella melitensis bv. 1
str. 16M]
gi|23463493|gb|AAN33361.1| flagellar basal-body rod protein FlgG [Brucella suis 1330]
gi|62197296|gb|AAX75595.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 1
str. 9-941]
gi|82939369|emb|CAJ12317.1| Flagellar basal body rod protein [Brucella melitensis biovar
Abortus 2308]
gi|148369211|gb|ABQ62083.1| flagellar basal-body rod protein FlgG [Brucella ovis ATCC 25840]
gi|161337047|gb|ABX63351.1| flagellar basal-body rod protein FlgG [Brucella canis ATCC 23365]
gi|163675069|gb|ABY39179.1| flagellar basal-body rod protein FlgG [Brucella suis ATCC 23445]
gi|189020942|gb|ACD73663.1| Flagellar basal body rod protein [Brucella abortus S19]
gi|225616471|gb|EEH13519.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
gi|237787478|gb|EEP61694.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
A]
gi|260097612|gb|EEW81486.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
gi|260151946|gb|EEW87039.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
16M]
gi|260155181|gb|EEW90262.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
gi|260669920|gb|EEX56860.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4
str. 292]
gi|260677134|gb|EEX63955.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6
str. 870]
gi|260872364|gb|EEX79433.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9
str. C68]
gi|260917266|gb|EEX84127.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3
str. Tulya]
gi|260918603|gb|EEX85256.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
gi|261298245|gb|EEY01742.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
B2/94]
gi|261299557|gb|EEY03054.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
gi|261302762|gb|EEY06259.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
M163/99/10]
gi|261742909|gb|EEY30835.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
686]
gi|262550932|gb|EEZ07093.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
gi|262764260|gb|EEZ10292.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
str. Ether]
gi|263000180|gb|EEZ12870.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
str. Rev.1]
gi|264659172|gb|EEZ29433.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
M292/94/1]
gi|264664242|gb|EEZ34503.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
gi|297173823|gb|EFH33187.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5
str. B3196]
gi|306288938|gb|EFM60238.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
gi|306406358|gb|EFM62600.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
Length = 262
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
IA+ N ++++ NIAN +T ++ + + F +L Q+ A
Sbjct: 6 IAATGMNAQQLNLEVIANNIANINTTGFK-RARAEFTDLLYQSERTAG 52
>gi|332187894|ref|ZP_08389627.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
gi|332012055|gb|EGI54127.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
Length = 251
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 12/84 (14%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ Q ++ N+ANAST +RA D F+ I + +
Sbjct: 7 TAATGMRSHMAAQSAIANNMANASTIGFRA-DRVVFDRIDLKG-----------GGAAFE 54
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGN 92
A + VQ +GN
Sbjct: 55 ARMPTAEEVTDADRAPGTVQHTGN 78
>gi|323967018|gb|EGB62444.1| flagellar basal-body rod protein FlgF [Escherichia coli M863]
gi|327253476|gb|EGE65114.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
Length = 251
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|294675564|ref|YP_003576179.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
gi|294474384|gb|ADE83772.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
Length = 452
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%)
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
+ + S +SG + + P G G+ V + EL + Y
Sbjct: 373 GLTALDNQTFQVSSTSGSFYLWDAGDGPTGAVEGYAREGSAVDVAQELTNLIQTQRAYSS 432
Query: 113 NTKLIKKLNSMVMHVV 128
N K+I+ ++ M+
Sbjct: 433 NAKVIQTVDEMLQETT 448
>gi|224372658|ref|YP_002607030.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
gi|223589304|gb|ACM93040.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
Length = 261
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 20 RQKIVSENIANASTPNYRAKD--ISSFETILNQ 50
R ++S N+AN +T ++ D I FE + ++
Sbjct: 18 RLNVISNNLANVNTAGFKQDDIIIGDFERLFSE 50
>gi|225552055|ref|ZP_03772995.1| flagellar hook protein FlgE [Borrelia sp. SV1]
gi|225371053|gb|EEH00483.1| flagellar hook protein FlgE [Borrelia sp. SV1]
Length = 442
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA--------RTHET--H 61
R +V NIAN +T ++ K +F+ +++Q+ A T+
Sbjct: 10 SGLQNHQTRMDVVGNNIANVNTIGFK-KGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
L + +S + + + + VSGN
Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGN 99
>gi|328948413|ref|YP_004365750.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
2489]
gi|328448737|gb|AEB14453.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
2489]
Length = 463
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 12 QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR--THETHLKESDSSG 69
R ++ NI+N +T ++ K ++F+ +++Q A T E G
Sbjct: 10 SGLQNHQTRMDVIGNNISNVNTYGFK-KGRATFQDMISQQINGAARPTEEVGGVNPKEVG 68
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
L + I+ Q +Q +GNT + +
Sbjct: 69 LGMSVATIDTIFTQ-GNLQTTGNTTDLAIQ 97
>gi|269796400|ref|YP_003315855.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
10542]
gi|269098585|gb|ACZ23021.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
10542]
Length = 134
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 11/135 (8%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST------PNYRAKDISSFETILNQNFLM 54
M IAS + VS+N+AN +T ++A+ + + +N
Sbjct: 1 MTTFGAIGIASTGMTVNRKWLDAVSDNLANINTVRPSDEAAFQARYVVASAVGYPENGQG 60
Query: 55 ARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNT 114
+ L ++ +H H + + V + ++ + + Y+ N
Sbjct: 61 VQVAGIELGSAEGRMVHEPDHPLADAEGYVKYPE-----VDMAGQMSQMIMAQRGYQANA 115
Query: 115 KLIKKLNSMVMHVVR 129
++ + + ++
Sbjct: 116 SVVDRAKATYEAALQ 130
>gi|254464969|ref|ZP_05078380.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
gi|206685877|gb|EDZ46359.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
Length = 435
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%)
Query: 53 LMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYEL 112
M K +D SG + E P + G + V + EL + Y
Sbjct: 356 GMQALDSQTYKPTDDSGAFYLWDAGEGPTGEILGYAQEESAVDVATELTDMIKTQRAYSS 415
Query: 113 NTKLIKKLNSMVMHVV 128
N K+I+ ++ M+
Sbjct: 416 NAKVIQTVDEMLQETT 431
>gi|153953785|ref|YP_001394550.1| hypothetical protein CKL_1160 [Clostridium kluyveri DSM 555]
gi|219854401|ref|YP_002471523.1| hypothetical protein CKR_1058 [Clostridium kluyveri NBRC 12016]
gi|146346666|gb|EDK33202.1| FlgE [Clostridium kluyveri DSM 555]
gi|219568125|dbj|BAH06109.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 348
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M P + I+ AN ++ ++ NIAN+ST Y+ + + +F+ +++QN T
Sbjct: 1 MLPSMYSGISGLRAN--QQKLNVIGNNIANSSTTAYKTQSM-NFQDMISQNLSDPSAPST 57
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTG 86
+ + V D TTG
Sbjct: 58 SIGGVNGKQSGLGVQVAGISTDFTTG 83
>gi|158321569|ref|YP_001514076.1| hypothetical protein Clos_2549 [Alkaliphilus oremlandii OhILAs]
gi|158141768|gb|ABW20080.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
oremlandii OhILAs]
Length = 264
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
A+ +S N+AN +T Y+ + + F+ +L N T+L + + S
Sbjct: 6 TAASGMKAQQLNMDTISNNLANVNTTGYKKQKVE-FKDLLYANM-----RTTNLVDGEGS 59
Query: 69 GLHWNAHVIEAPLDQTTGVQVSGN 92
++ P+ TT + +GN
Sbjct: 60 PVNLQVGHGVMPVA-TTRLFTTGN 82
>gi|42526518|ref|NP_971616.1| flagellar basal body rod protein FlgG [Treponema denticola ATCC
35405]
gi|41816711|gb|AAS11497.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
35405]
gi|325473456|gb|EGC76651.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
Length = 264
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART-------HETH 61
A+ N V+ N+AN +T ++ K + FE ++ Q A T
Sbjct: 7 TAATGMNTQQANIDTVANNLANVNTSGFK-KQRAEFEDLIYQTVKTAGTPATEDTITPVG 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ + L + E Q TGV
Sbjct: 66 VQMGHGARLAATQRIFEQGSLQNTGVTSD 94
>gi|56965597|ref|YP_177331.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
gi|56911843|dbj|BAD66370.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
Length = 262
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA----RTHE 59
++ A+ + L + +S N+ANA T ++ + +SF +L +L R
Sbjct: 1 MSIGHTAAATLSQLQAKIDTISNNMANAETTGFKRRS-ASFADVLTSEYLNQPNENRQTP 59
Query: 60 THLKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
L+ + L +E + TG ++
Sbjct: 60 HGLRVGTGAKLAQTQIQLEQGTLRETGRELD 90
>gi|311280015|ref|YP_003942246.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
gi|308749210|gb|ADO48962.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
Length = 260
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTVRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|296102907|ref|YP_003613053.1| flagellar basal body rod protein FlgF [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295057366|gb|ADF62104.1| flagellar basal body rod protein FlgF [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 251
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTASNLANASTPGFRAQ 37
>gi|253990126|ref|YP_003041482.1| flagellar basal-body rod protein flgf [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781576|emb|CAQ84739.1| flagellar basal-body rod protein flgf (putative proximal rod
protein) [Photorhabdus asymbiotica]
Length = 251
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP ++A+
Sbjct: 19 QAVTANNLANASTPGFKAQ 37
>gi|170288994|ref|YP_001739232.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
gi|170176497|gb|ACB09549.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
Length = 261
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
A+ + + ++ N+AN T Y+ K + F+ +L Q A T T S +G
Sbjct: 8 AATGMSAQQFKLDTIANNLANVDTTGYK-KVRAEFQDLLYQYVKNAGT-PTAATSSLPTG 65
Query: 70 LHWNAHVIEAPLDQTT---GVQVSGNTVGI 96
L+ V A + + +GN + +
Sbjct: 66 LYVGHGVRTAATTRIFTLGNFEQTGNALDL 95
>gi|170725957|ref|YP_001759983.1| flagellar basal body rod protein FlgG [Shewanella woodyi ATCC
51908]
gi|169811304|gb|ACA85888.1| flagellar basal-body rod protein FlgG [Shewanella woodyi ATCC
51908]
Length = 262
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKESDSSGLHWNAHVIE 78
++S N+ANAST Y+ K + FE +L Q A T L + G +
Sbjct: 20 SVISNNVANASTVGYK-KSRAVFEDLLYQTVNQAGGVSASNTKLPNGLNVGAGTKVVATQ 78
Query: 79 APLDQTTGVQVSGNTVGITNE 99
Q + N++ + E
Sbjct: 79 KVFTQGNMLTTD-NSLDLMVE 98
>gi|323174793|gb|EFZ60408.1| flagellar basal-body rod protein flgG domain protein [Escherichia
coli LT-68]
Length = 79
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|283953936|ref|ZP_06371465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni 414]
gi|283794541|gb|EFC33281.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
jejuni 414]
Length = 262
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+ S NIAN +T ++ K + F ++ Q A T + + S V P
Sbjct: 20 VTSNNIANVNTAGFK-KSRAEFADLMYQVMKYAGTSTS---ATTLSPSGIEVGVGVRPTA 75
Query: 83 QTTGVQVSGN 92
T V GN
Sbjct: 76 -VTKVFTEGN 84
>gi|283780137|ref|YP_003370892.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
gi|283438590|gb|ADB17032.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
Length = 266
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL--NQNFLMARTHET 60
+ A+ L + +++ N+AN +T ++ + ++FE + + ++ +
Sbjct: 2 SVQTLYTAATGMESLQTKLDVIANNLANVNTTGFK-RGRANFEDLFYRQEKLPGSQDQQQ 60
Query: 61 HLKESDSS-GLHWNAHVIEAPLD----QTTGVQVSGNTVGITNE 99
+L + ++ GL ++ + Q TG Q+ V I +
Sbjct: 61 NLTATGTAIGLGSRVSSVQTNFNQGAFQETGGQLD---VAIEGQ 101
>gi|261339378|ref|ZP_05967236.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
ATCC 35316]
gi|288318179|gb|EFC57117.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
ATCC 35316]
Length = 260
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|254511992|ref|ZP_05124059.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
KLH11]
gi|221535703|gb|EEE38691.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
KLH11]
Length = 261
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFE---TILNQNFLMARTHET 60
+ +IA+ R + +S N+AN +T Y + + + + ++ + T
Sbjct: 1 MRALKIAATGMTAQQMRVETISNNLANMNTTGYNTRRAEFADLHYQQVARAGAVSASDGT 60
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNE 99
L GL + L+Q G+ +G+ + + E
Sbjct: 61 VLPTGIQLGLGVRPAAVTVQLEQ-GGLSATGSDLDVAIE 98
>gi|195940720|ref|ZP_03086102.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
str. EC4024]
gi|295096223|emb|CBK85313.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 260
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|153011524|ref|YP_001372738.1| flagellar basal body rod protein FlgG [Ochrobactrum anthropi ATCC
49188]
gi|151563412|gb|ABS16909.1| flagellar basal-body rod protein FlgG [Ochrobactrum anthropi ATCC
49188]
Length = 262
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
IA+ N ++++ NIAN +T ++ + + F +L Q+ A
Sbjct: 6 IAATGMNAQQLNLEVIANNIANINTTGFK-RARAEFSDLLYQSERTAG 52
>gi|126730135|ref|ZP_01745947.1| flagellar basal body rod protein [Sagittula stellata E-37]
gi|126709515|gb|EBA08569.1| flagellar basal body rod protein [Sagittula stellata E-37]
Length = 237
Score = 33.8 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 31/114 (27%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN-------FLMARTHETHL 62
S+ ++ L E Q +++ NIANA+T +R ++ F L++ R H+T
Sbjct: 9 LSRQSSLLREMQ-VIANNIANANTTGFR-QEGMIFSEYLSEGDRLDSVSMAAGRIHKTSF 66
Query: 63 KESD----------------------SSGLHWNAHVIEAPLDQTTGVQVSGNTV 94
+ + +G +P + V GN V
Sbjct: 67 AQGELEPTGSAYDLAIEGEGFFLVGTPNGERLTRAGAFSPSAEGLLVTPDGNPV 120
>gi|114320058|ref|YP_741741.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226452|gb|ABI56251.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
MLHE-1]
Length = 246
Score = 33.8 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
+A A E Q+ + N+AN TP +RA + +++ E+ +
Sbjct: 7 LAMTGAKHTLEAQQHNNHNLANVDTPGFRA----DLDALMSAPVRGPGHDARAYSEALTV 62
Query: 69 GLH-WNAHVIEAPLDQTTGVQVSG 91
G +++ + G
Sbjct: 63 GSDFRQGGIVQTGRALDVAIDGDG 86
>gi|320354701|ref|YP_004196040.1| hypothetical protein Despr_2613 [Desulfobulbus propionicus DSM
2032]
gi|320123203|gb|ADW18749.1| protein of unknown function DUF1078 domain protein [Desulfobulbus
propionicus DSM 2032]
Length = 117
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ Q A A S + + + NIAN +T YR + +L+ +
Sbjct: 2 ISGIQSALSGAQAFSAKIESNAHNIANLNTEGYRKSRV-----VLSAGVAQSV------- 49
Query: 64 ESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSM 123
++ + V+ Q V+ N V + E+ + Y N + ++ ++M
Sbjct: 50 QATVGRVDAPGPVVNEETAQGYAVRELSN-VDLGEEIPDLMRNTHGYAANLRTVQVSDNM 108
Query: 124 VMHVV 128
+ ++
Sbjct: 109 LQTLL 113
>gi|306846278|ref|ZP_07478839.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
gi|306273273|gb|EFM55142.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
Length = 262
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
IA+ N ++++ NIAN +T ++ + + F +L Q+ A
Sbjct: 6 IAATGMNAQQLNLEVIANNIANINTTGFK-RARAEFTDLLYQSERTAG 52
>gi|218689030|ref|YP_002397242.1| flagellar basal body rod protein FlgF [Escherichia coli ED1a]
gi|218426594|emb|CAR07422.1| flagellar component of cell-proximal portion of basal-body rod
[Escherichia coli ED1a]
Length = 251
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 19 QAVTANNLANASTPGFRAQ 37
>gi|73539450|ref|YP_299817.1| flagellar hook protein FlgE [Ralstonia eutropha JMP134]
gi|72122787|gb|AAZ64973.1| Flagellar basal body rod protein:Protein of unknown function
DUF1078:Flagellar basal body FlaE [Ralstonia eutropha
JMP134]
Length = 417
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F N + ++ NIAN++T Y+A + F + + T + +S
Sbjct: 3 FGQGVSGINAAAANLDVIGNNIANSNTVGYKAST-AQFADVYAGTKIGLGTTVNSVVQSF 61
Query: 67 SSG 69
+ G
Sbjct: 62 TQG 64
>gi|296102906|ref|YP_003613052.1| flagellar basal body rod protein FlgG [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295057365|gb|ADF62103.1| flagellar basal body rod protein FlgG [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 260
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|259417939|ref|ZP_05741858.1| flagellar basal-body rod protein FlgG [Silicibacter sp.
TrichCH4B]
gi|259346845|gb|EEW58659.1| flagellar basal-body rod protein FlgG [Silicibacter sp.
TrichCH4B]
Length = 261
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ +IA+ + R + +S N+AN +T Y A+ + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARR-AEFADLHYQQISRAGTVNASDG 59
Query: 64 ESDSSGLHWNAHVIEAPLD---QTTGVQVSGN--TVGIT 97
+G+ V A + + +GN V I
Sbjct: 60 TVLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDVAID 98
>gi|239815263|ref|YP_002944173.1| hypothetical protein Vapar_2278 [Variovorax paradoxus S110]
gi|239801840|gb|ACS18907.1| protein of unknown function DUF1078 domain protein [Variovorax
paradoxus S110]
Length = 395
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 7/77 (9%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETH-------LKESDSSGLHWNA 74
++++ N AN +TP +++ + + + L + + L + +S
Sbjct: 20 RVIANNTANINTPGFKSSSLQFADMFYSGGNLGGGSTSQNRDQVGFGLSTAGTSLSFKQG 79
Query: 75 HVIEAPLDQTTGVQVSG 91
+ + D V G
Sbjct: 80 ELRQTGNDLDMAVDGQG 96
>gi|220932550|ref|YP_002509458.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
168]
gi|219993860|gb|ACL70463.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
168]
Length = 471
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 83 QTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130
+ +SG V + E+ + Y K++ K++ M+ ++ G
Sbjct: 424 ENKQASISG--VSLDEEMANMIKFQQAYNAAAKMVSKVDEMLNTLING 469
>gi|171059410|ref|YP_001791759.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
gi|170776855|gb|ACB34994.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
Length = 260
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
I+ + +VS N+AN +T Y+ K + FE ++ Q + + + +
Sbjct: 7 ISKTGMEAQQTQLDVVSNNLANVATNGYK-KSHAVFEDLMYQTLRQSGAASSEQTQLPTG 65
Query: 69 GLHWNAHVIEAPLDQTTG--VQVSGNTVGI 96
A Q T +Q SGNT+ +
Sbjct: 66 LQVGLGVRTVATSRQFTQGNLQQSGNTLDV 95
>gi|167623363|ref|YP_001673657.1| flagellar basal body rod protein FlgG [Shewanella halifaxensis
HAW-EB4]
gi|167353385|gb|ABZ75998.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
HAW-EB4]
Length = 262
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKESDSSGLHWNAHVIE 78
++S N+ANAST ++ K + FE +L QN A T L S G +
Sbjct: 20 SVISNNVANASTVGFK-KSRAVFEDLLYQNVSQAGGISASNTKLPNGLSIGAGTKVVATQ 78
Query: 79 APLDQTTGVQVSGNTVGITNE 99
Q + N++ + E
Sbjct: 79 EMFTQGNMLTTD-NSLDLMVE 98
>gi|163850383|ref|YP_001638426.1| hypothetical protein Mext_0950 [Methylobacterium extorquens PA1]
gi|163661988|gb|ABY29355.1| protein of unknown function DUF1078 domain protein
[Methylobacterium extorquens PA1]
Length = 460
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + Q A S +S NIAN+ T Y+ D +SF +L ++T +
Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRID-TSFVDMLVDGDAKSQTAGS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
S L + + +T + + G
Sbjct: 60 ---VGAFSELTNSIQGNKVSTGVSTNMAIDG 87
>gi|157961173|ref|YP_001501207.1| flagellar basal body rod protein FlgG [Shewanella pealeana ATCC
700345]
gi|157846173|gb|ABV86672.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
700345]
Length = 262
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMAR---THETHLKESDSSGLHWNAHVIE 78
++S N+ANAST ++ K + FE +L QN A T L S G +
Sbjct: 20 SVISNNVANASTVGFK-KSRAVFEDLLYQNVNQAGGISASNTKLPNGLSIGSGTKVVATQ 78
Query: 79 APLDQTTGVQVSGNTVGITNE 99
Q + N++ + E
Sbjct: 79 EIFTQGNMLTTD-NSLDLLVE 98
>gi|146311248|ref|YP_001176322.1| flagellar basal body rod protein FlgG [Enterobacter sp. 638]
gi|145318124|gb|ABP60271.1| flagellar basal-body rod protein FlgG [Enterobacter sp. 638]
Length = 260
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|95929874|ref|ZP_01312615.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
gi|95134170|gb|EAT15828.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
Length = 261
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%)
Query: 46 TILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGH 105
I + + E+ SSG+ E L + + G+ V + E+
Sbjct: 176 AIFSNESGLRSLGRNLFAETLSSGVANTGIPGENGLGTLSQGYLEGSNVSVMEEMVNMIA 235
Query: 106 IKYLYELNTKLIKKLNSMVMHV 127
+ YE+N+K I+ + M+
Sbjct: 236 GQRAYEVNSKAIQTADEMLQMT 257
>gi|317047693|ref|YP_004115341.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
gi|316949310|gb|ADU68785.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
Length = 260
Score = 33.4 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + +++ N+AN ST ++ + + FE ++ Q T + + + S
Sbjct: 7 IAKTGLDAQQTNMDVIANNLANVSTNGFK-RSRAVFEDLMYQTVRQPGTQSSE-QTTLPS 64
Query: 69 GLHWNAHVIEAPLDQ 83
G+ V ++
Sbjct: 65 GMQIGTGVRPVTTER 79
>gi|322421663|ref|YP_004200886.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
gi|320128050|gb|ADW15610.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
Length = 238
Score = 33.4 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILN 49
R ++S N+ANAST ++A D FE+IL
Sbjct: 15 AQRRLDVISNNLANASTTGFKA-DQIQFESILA 46
>gi|229058378|ref|ZP_04196762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
gi|228719887|gb|EEL71477.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
Length = 137
Score = 33.4 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANASTPN------YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T Y + + ++F ++L+ A T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTGAPGAEPYHRRSVVLESNNNFASMLDG----APTNGVKVKSIETDR 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 NENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|237731009|ref|ZP_04561490.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
gi|226906548|gb|EEH92466.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
Length = 260
Score = 33.4 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|17988503|ref|NP_541136.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. 16M]
gi|256042866|ref|ZP_05445812.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str.
Rev.1]
gi|260564103|ref|ZP_05834588.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
gi|265989301|ref|ZP_06101858.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str.
Rev.1]
gi|38257707|sp|Q8YDL6|FLGE_BRUME RecName: Full=Flagellar hook protein flgE
gi|17984295|gb|AAL53400.1| flagellar hook protein flge [Brucella melitensis bv. 1 str. 16M]
gi|260151746|gb|EEW86839.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
gi|262999970|gb|EEZ12660.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str.
Rev.1]
Length = 396
Score = 33.4 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 59 SVLTDVRYGISDQGGIR--STSSTTDLAIDGN 88
>gi|320538206|ref|ZP_08038101.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
gi|320145023|gb|EFW36744.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
Length = 452
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 14 ANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
R ++ N+AN +T ++ + +F+ +++Q A
Sbjct: 1 MQNHQTRMDVIGNNVANVNTTGFK-RGRVNFQDLISQQLSGA 41
>gi|304570583|ref|YP_388203.2| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 547
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 17 LSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA 55
ER ++ NIAN +T ++ + FE ++Q+ A
Sbjct: 17 HGERMNVLGNNIANVNTVGFKGARM-DFEDFISQDVNTA 54
>gi|295096224|emb|CBK85314.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 243
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 21 QKIVSENIANASTPNYRAK 39
Q + + N+ANASTP +RA+
Sbjct: 11 QAVTASNLANASTPGFRAQ 29
>gi|291613044|ref|YP_003523201.1| flagellar hook-associated protein FlgK [Sideroxydans
lithotrophicus ES-1]
gi|291583156|gb|ADE10814.1| flagellar hook-associated protein FlgK [Sideroxydans
lithotrophicus ES-1]
Length = 640
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDI 41
++ + IA N S NIANA+TP Y + I
Sbjct: 1 MSIYGIAVSALNAAQAGLTTTSNNIANANTPGYSRQAI 38
>gi|157147102|ref|YP_001454421.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
gi|157084307|gb|ABV13985.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
Length = 396
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 20/103 (19%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
++V N AN + +KD +++ + + T T L S SG ++
Sbjct: 307 QLVLANFANPN--GLASKDGTTWVQTASSGAPLTGTPGTGLLGSVKSGALESS------- 357
Query: 82 DQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
V +T+EL + Y+ NTK+I ++M+
Sbjct: 358 -----------NVDLTSELVGLMTAQRNYQANTKVISTNDNMM 389
>gi|218528943|ref|YP_002419759.1| hypothetical protein Mchl_0913 [Methylobacterium chloromethanicum
CM4]
gi|218521246|gb|ACK81831.1| protein of unknown function DUF1078 domain protein
[Methylobacterium chloromethanicum CM4]
Length = 460
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M + Q A S +S NIAN+ T Y+ D +SF +L ++T +
Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRID-TSFVDMLVDGDAKSQTAGS 59
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSG 91
S L + + +T + + G
Sbjct: 60 ---VGAFSELTNSIQGNKVSTGVSTNMAIDG 87
>gi|2832235|gb|AAC01569.1| flagellar hook [Brucella abortus]
Length = 396
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 59 SVLTDVRYGISDQGGIR--STSSTTDLAIDGN 88
>gi|62317957|ref|YP_223810.1| flagellar hook protein FlgE [Brucella abortus bv. 1 str. 9-941]
gi|83269934|ref|YP_419225.1| flagellar hook protein FlgE [Brucella melitensis biovar Abortus
2308]
gi|189023208|ref|YP_001932949.1| flagellar hook protein FlgE [Brucella abortus S19]
gi|225686885|ref|YP_002734857.1| flagellar hook protein FlgE [Brucella melitensis ATCC 23457]
gi|254691611|ref|ZP_05154865.1| flagellar hook protein FlgE [Brucella abortus bv. 6 str. 870]
gi|254731634|ref|ZP_05190212.1| flagellar hook protein FlgE [Brucella abortus bv. 4 str. 292]
gi|256112177|ref|ZP_05453098.1| flagellar hook protein FlgE [Brucella melitensis bv. 3 str.
Ether]
gi|256256798|ref|ZP_05462334.1| flagellar hook protein FlgE [Brucella abortus bv. 9 str. C68]
gi|256261978|ref|ZP_05464510.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
gi|260544142|ref|ZP_05819963.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
gi|260757242|ref|ZP_05869590.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
gi|260759393|ref|ZP_05871741.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
gi|260883046|ref|ZP_05894660.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
gi|265993603|ref|ZP_06106160.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str.
Ether]
gi|297250151|ref|ZP_06933852.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
gi|68845076|sp|O52070|FLGE_BRUAB RecName: Full=Flagellar hook protein flgE
gi|12330680|gb|AAG52877.1| FlgE [Brucella abortus]
gi|62198150|gb|AAX76449.1| FlgE, flagellar hook protein [Brucella abortus bv. 1 str. 9-941]
gi|82940208|emb|CAJ13264.1| Flagellar basal body rod protein:Trypsin inhibitor Kunitz
[Brucella melitensis biovar Abortus 2308]
gi|189021782|gb|ACD74503.1| Trypsin inhibitor Kunitz [Brucella abortus S19]
gi|225642990|gb|ACO02903.1| flagellar basal body FlaE domain protein [Brucella melitensis
ATCC 23457]
gi|260097413|gb|EEW81287.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
gi|260669711|gb|EEX56651.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
gi|260677350|gb|EEX64171.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
gi|260872574|gb|EEX79643.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
gi|262764473|gb|EEZ10505.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str.
Ether]
gi|263091462|gb|EEZ15998.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
gi|297174020|gb|EFH33384.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
gi|326411303|gb|ADZ68367.1| flagellar hook protein FlgE [Brucella melitensis M28]
gi|326554592|gb|ADZ89231.1| flagellar hook protein FlgE [Brucella melitensis M5-90]
Length = 396
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 59 SVLTDVRYGISDQGGIR--STSSTTDLAIDGN 88
>gi|294500941|ref|YP_003564641.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
B1551]
gi|294350878|gb|ADE71207.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
B1551]
Length = 149
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 17/138 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN----------YRAKDI-------SSFETILNQ 50
I S R +VS N+ANA T Y+ K + SF ++L+
Sbjct: 8 NITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVIQSDRSPSFSSLLHS 67
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ + + + +N D V V E+ Y
Sbjct: 68 EINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVKMPNVDPLKEMTDLISATRSY 127
Query: 111 ELNTKLIKKLNSMVMHVV 128
E N + S++ +
Sbjct: 128 EANVTVFNTNKSILTKAL 145
>gi|271500066|ref|YP_003333091.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
gi|270343621|gb|ACZ76386.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
Length = 399
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
F A N S ++ NIAN++T ++A +I SF + + + T + +
Sbjct: 3 FSQAVSGLNAASSNLDVIGNNIANSATVGFKASNI-SFADMYAGSNVGLGTKVASVLQDF 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSGN 92
+G N + V ++GN
Sbjct: 62 GNGSINN-------TSRALDVAINGN 80
>gi|225686012|ref|YP_002733984.1| flagellar basal body rod protein FlgG [Brucella melitensis ATCC
23457]
gi|256262865|ref|ZP_05465397.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
63/9]
gi|225642117|gb|ACO02030.1| flagellar basal-body rod protein FlgG [Brucella melitensis ATCC
23457]
gi|263092700|gb|EEZ16909.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
63/9]
gi|326410335|gb|ADZ67399.1| flagellar basal body rod protein FlgG [Brucella melitensis M28]
gi|326553627|gb|ADZ88266.1| flagellar basal body rod protein FlgG [Brucella melitensis M5-90]
Length = 262
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMAR 56
IA+ N ++++ NIAN +T ++ + + F +L Q+ A
Sbjct: 6 IAATGMNAQQLNLEVIANNIANINTTGFK-RARAEFTDLLYQSERTAG 52
>gi|196033444|ref|ZP_03100856.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
gi|195993878|gb|EDX57834.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
Length = 137
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+ + T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADIYERRSVVLESNNSFANMLDGSP----TNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|92116937|ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobacter hamburgensis
X14]
gi|91799831|gb|ABE62206.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
Length = 255
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL 48
M+ ++ Q L + +V+ N+AN +T Y+A D S FE L
Sbjct: 1 MENTLLIGLSRQMM--LERQMDVVANNVANVTTNGYKA-DRSLFEEYL 45
>gi|16760055|ref|NP_455672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16764535|ref|NP_460150.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142174|ref|NP_805516.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56413834|ref|YP_150909.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62179696|ref|YP_216113.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161614598|ref|YP_001588563.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553033|ref|ZP_02346783.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994043|ref|ZP_02575135.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234105|ref|ZP_02659163.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237261|ref|ZP_02662319.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244778|ref|ZP_02669710.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264028|ref|ZP_02686001.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467131|ref|ZP_02700973.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822622|ref|ZP_02834622.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446556|ref|YP_002040433.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450313|ref|YP_002045178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472223|ref|ZP_03078207.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194734396|ref|YP_002114178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251031|ref|YP_002146864.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262058|ref|ZP_03162132.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362757|ref|YP_002142394.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|200390304|ref|ZP_03216915.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|207857313|ref|YP_002243964.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213424682|ref|ZP_03357447.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582039|ref|ZP_03363865.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213613179|ref|ZP_03371005.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648928|ref|ZP_03378981.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865503|ref|ZP_03387622.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224584317|ref|YP_002638115.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911001|ref|ZP_04654838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289828578|ref|ZP_06546403.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|60392289|sp|P0A1J3|FLGG_SALTY RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|60392290|sp|P0A1J4|FLGG_SALTI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
Full=Distal rod protein
gi|25298926|pir||AD0640 flagellar basal-body rod protein FlgG (distal rod protein)
[imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|47677|emb|CAA36314.1| flgG protein product (AA 1-260) [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|16419696|gb|AAL20109.1| flagellar biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16502349|emb|CAD08303.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29137804|gb|AAO69365.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56128091|gb|AAV77597.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|62127329|gb|AAX65032.1| flagellar biosynthesis, cell-distal portion of basal-body rod
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161363962|gb|ABX67730.1| hypothetical protein SPAB_02348 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405219|gb|ACF65441.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408617|gb|ACF68836.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194458587|gb|EDX47426.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194709898|gb|ACF89119.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630467|gb|EDX49093.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197094234|emb|CAR59739.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197214734|gb|ACH52131.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197240313|gb|EDY22933.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289797|gb|EDY29158.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199602749|gb|EDZ01295.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205322431|gb|EDZ10270.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328014|gb|EDZ14778.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331903|gb|EDZ18667.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336447|gb|EDZ23211.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341038|gb|EDZ27802.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347402|gb|EDZ34033.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709116|emb|CAR33449.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468844|gb|ACN46674.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261246390|emb|CBG24199.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992953|gb|ACY87838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157720|emb|CBW17212.1| flagellar basal-body rod protein FlgG (distal rod protein)
[Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912166|dbj|BAJ36140.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086381|emb|CBY96154.1| Flagellar basal-body rod protein flgG Distal rod protein
[Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321223797|gb|EFX48860.1| Flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616549|gb|EFY13458.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620510|gb|EFY17374.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622504|gb|EFY19349.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629655|gb|EFY26430.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632625|gb|EFY29371.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636880|gb|EFY33583.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641582|gb|EFY38220.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644072|gb|EFY40618.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650028|gb|EFY46446.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653953|gb|EFY50276.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658485|gb|EFY54747.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663343|gb|EFY59545.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670077|gb|EFY66217.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674859|gb|EFY70950.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676671|gb|EFY72738.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682593|gb|EFY78612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686654|gb|EFY82633.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322714166|gb|EFZ05737.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323129449|gb|ADX16879.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195768|gb|EFZ80944.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198340|gb|EFZ83444.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323209179|gb|EFZ94116.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209683|gb|EFZ94612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217861|gb|EGA02576.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222149|gb|EGA06533.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224921|gb|EGA09179.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229663|gb|EGA13786.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232888|gb|EGA16984.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240623|gb|EGA24665.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242937|gb|EGA26958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250254|gb|EGA34143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252629|gb|EGA36467.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258843|gb|EGA42496.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261032|gb|EGA44625.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266941|gb|EGA50426.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269982|gb|EGA53431.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332988070|gb|AEF07053.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 260
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|254227981|ref|ZP_04921411.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
gi|151939477|gb|EDN58305.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
Length = 144
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 44/139 (31%), Gaps = 10/139 (7%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANAST----PNYRAKDISS-FETILNQNFLMA 55
M + I + R V+ N+ANA P+ K + F T+ + L
Sbjct: 1 MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQLTT 60
Query: 56 RTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTV-----GITNELYKSGHIKYLY 110
E + NA E + + V + E+ +
Sbjct: 61 ENGVYPNAEVRIVDVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSF 120
Query: 111 ELNTKLIKKLNSMVMHVVR 129
E N +++ + SM ++R
Sbjct: 121 ETNVEVLSNVKSMQQGLLR 139
>gi|320173530|gb|EFW48726.1| Flagellar basal-body rod protein FlgG [Shigella dysenteriae CDC
74-1112]
Length = 260
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|283833628|ref|ZP_06353369.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
29220]
gi|291071311|gb|EFE09420.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
29220]
Length = 260
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|256059804|ref|ZP_05449999.1| flagellar hook protein FlgE [Brucella neotomae 5K33]
gi|261323784|ref|ZP_05962981.1| flagellar hook protein flgE [Brucella neotomae 5K33]
gi|261299764|gb|EEY03261.1| flagellar hook protein flgE [Brucella neotomae 5K33]
Length = 396
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 59 SVLTDVRYGISDQGGIR--STSSTTDLAIDGN 88
>gi|254720773|ref|ZP_05182584.1| flagellar hook protein FlgE [Brucella sp. 83/13]
gi|265985831|ref|ZP_06098566.1| flagellar hook protein flgE [Brucella sp. 83/13]
gi|306840136|ref|ZP_07472921.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
gi|264664423|gb|EEZ34684.1| flagellar hook protein flgE [Brucella sp. 83/13]
gi|306404781|gb|EFM61075.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
Length = 396
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 4 ITFFQIAS---QHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
++ + + N + R V++NIANAST Y+ + +L +
Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQY--NSG 58
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ G+ + TT + + GN
Sbjct: 59 SVLTDVRYGISDQGGIR--STSSTTDLAIDGN 88
>gi|170768358|ref|ZP_02902811.1| flagellar basal-body rod protein FlgG [Escherichia albertii
TW07627]
gi|170123124|gb|EDS92055.1| flagellar basal-body rod protein FlgG [Escherichia albertii
TW07627]
Length = 260
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|188582486|ref|YP_001925931.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
BJ001]
gi|179345984|gb|ACB81396.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
BJ001]
Length = 263
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 22 KIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPL 81
+++S NIAN T Y+ + + F+ +L QN + + + +GL + V
Sbjct: 19 QVISNNIANLRTTGYKRQQVH-FQDLLYQNLRRSGSSTSDQNTILPAGLALGSGVKTTST 77
Query: 82 DQ 83
+
Sbjct: 78 AR 79
>gi|189426330|ref|YP_001953507.1| flagellar basal body rod protein FlgG [Geobacter lovleyi SZ]
gi|189422589|gb|ACD96987.1| flagellar basal-body rod protein FlgG [Geobacter lovleyi SZ]
Length = 262
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-------MARTHETH 61
A+ N ++ +++ N+AN +T ++ K + F+ ++ Q A
Sbjct: 7 TAASGMNTQTQNINVIANNLANVNTTGFK-KSRADFQDLMYQTVQNPGSPSTNAAQIPVG 65
Query: 62 LKESDSSGLHWNAHVIEAPLDQTTGVQVS 90
++ S L + TG Q+
Sbjct: 66 IQFGMGSKLAAVSKQFTPGDFSNTGGQLD 94
>gi|116252321|ref|YP_768159.1| hypothetical protein RL2575 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256969|emb|CAK08063.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 101
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 35/131 (26%), Gaps = 34/131 (25%)
Query: 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET 60
M A + R ++ NIAN+STP Y
Sbjct: 1 MSISGIASTALSGMRAQTTRVSAIANNIANSSTPGY-----------------------A 37
Query: 61 HLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKL 120
L S +S + +P EL + Y+ N + +
Sbjct: 38 RLNTSLTSVEPGGVQAVVSPTASDIDPAT---------ELADLIEAEQSYKANAVVFETG 88
Query: 121 NSM--VMHVVR 129
M ++ ++
Sbjct: 89 ADMWEMLMSIK 99
>gi|24112486|ref|NP_706996.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
301]
gi|30062614|ref|NP_836785.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
2457T]
gi|24051372|gb|AAN42703.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
301]
gi|30040860|gb|AAP16591.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
2457T]
gi|281600496|gb|ADA73480.1| Flagellar basal body rod protein flgG [Shigella flexneri 2002017]
gi|313650470|gb|EFS14877.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2a str.
2457T]
gi|332758238|gb|EGJ88561.1| flagellar basal-body rod protein FlgG [Shigella flexneri 4343-70]
gi|332759659|gb|EGJ89964.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2747-71]
gi|332761424|gb|EGJ91708.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-671]
gi|332767686|gb|EGJ97879.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2930-71]
gi|333005399|gb|EGK24917.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-218]
gi|333019426|gb|EGK38709.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-304]
Length = 260
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|146278639|ref|YP_001168798.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17025]
gi|145556880|gb|ABP71493.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
ATCC 17025]
Length = 261
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
+ QIA+ + R ++S N+AN ST Y + + F + Q + T
Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNPRR-ADFADLHYQQMVRPGTVSAEDG 59
Query: 64 ESDSSGLHWNAHVIEAPLD 82
+G+ V + +
Sbjct: 60 RMLPTGVQLGMGVRPSAVS 78
>gi|238794000|ref|ZP_04637618.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
29909]
gi|238726632|gb|EEQ18168.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
29909]
Length = 260
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSS 68
IA + +++ N+AN ST ++ + + FE +L Q + + + S
Sbjct: 7 IAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTMRQPGAQSSE-QTTLPS 64
Query: 69 GLHWNAHVIEAPLDQ 83
GL V ++
Sbjct: 65 GLQIGTGVRPVATER 79
>gi|260222467|emb|CBA32060.1| hypothetical protein Csp_D30230 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 188
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHET-HLKES 65
FQ N S+ ++ NIANA+T +A + F ++ A + T + S
Sbjct: 3 FQTGLSGLNSSSKNLDVIGNNIANANTVGMKASR-TEFAALIATQLGPAGGNLTPGIGVS 61
Query: 66 DSSGLHWNAHVIEAPLDQTTGVQVSGN 92
+ + V ++GN
Sbjct: 62 VGTVAQQFTQGNISITGNNLDVAINGN 88
>gi|254462012|ref|ZP_05075428.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
HTCC2083]
gi|206678601|gb|EDZ43088.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
HTCC2083]
Length = 261
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMART 57
+ +IA+ + R +++S N+AN ST Y + + F + Q A T
Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLANMSTTGYNTRR-AEFADLHYQQMSRAGT 53
>gi|197104382|ref|YP_002129759.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
HLK1]
gi|196477802|gb|ACG77330.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
HLK1]
Length = 245
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Query: 10 ASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSG 69
SQ E +I++ NIAN T ++ + + + +D
Sbjct: 9 LSQQMVLRRE-MEIIANNIANLDTTGFKVESLMQKTDARAPAMTLGGPKPVKFVTADGVA 67
Query: 70 LHWNAHVIE 78
+ +
Sbjct: 68 RDFGQGALR 76
>gi|161503733|ref|YP_001570845.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865080|gb|ABX21703.1| hypothetical protein SARI_01818 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 260
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLK 63
I+ IA + +++ N+AN ST ++ + + FE +L Q + +
Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQR-AVFEDLLYQTIRQPGAQSSE-Q 59
Query: 64 ESDSSGLHWNAHVIEAPLDQ 83
+ SGL V ++
Sbjct: 60 TTLPSGLQIGTGVRPVATER 79
>gi|126462483|ref|YP_001043597.1| hypothetical protein Rsph17029_1715 [Rhodobacter sphaeroides ATCC
17029]
gi|126104147|gb|ABN76825.1| protein of unknown function DUF1078 domain protein [Rhodobacter
sphaeroides ATCC 17029]
Length = 251
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 36 YRAKDISSFETILNQNFLMARTHETHLKE-SDSSGLHWNAHVIEAPLDQTTGV---QVSG 91
Y +D + + + L+A T + D G P DQ V + G
Sbjct: 150 YEPQDGPPGQQV--EGPLIATTIPDGVTLRKDPDGRIRAGGEPLPPPDQRARVLQGVLEG 207
Query: 92 NTVGITNELYKSGHIKYLYELNTKLIKK 119
+ V EL S ++ +ELN ++I
Sbjct: 208 SNVNTMEELVSSIELQRTFELNLRMISS 235
>gi|30261743|ref|NP_844120.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
Ames]
gi|47526963|ref|YP_018312.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
'Ames Ancestor']
gi|49184573|ref|YP_027825.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
Sterne]
gi|49480942|ref|YP_035864.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52143711|ref|YP_083115.1| flagellar basal body rod protein FlgC [Bacillus cereus E33L]
gi|65319012|ref|ZP_00391971.1| COG1558: Flagellar basal body rod protein [Bacillus anthracis str.
A2012]
gi|165869530|ref|ZP_02214189.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0488]
gi|167633252|ref|ZP_02391577.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0442]
gi|170686301|ref|ZP_02877523.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0465]
gi|170706453|ref|ZP_02896913.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0389]
gi|190566322|ref|ZP_03019240.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
Tsiankovskii-I]
gi|196038959|ref|ZP_03106266.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
gi|218902859|ref|YP_002450693.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
gi|227815498|ref|YP_002815507.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
684]
gi|228914323|ref|ZP_04077938.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228926780|ref|ZP_04089848.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228933028|ref|ZP_04095891.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945347|ref|ZP_04107702.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229090705|ref|ZP_04221938.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
gi|229121296|ref|ZP_04250527.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
gi|229155315|ref|ZP_04283426.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
gi|229602307|ref|YP_002866143.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0248]
gi|254683233|ref|ZP_05147094.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
CNEVA-9066]
gi|254723821|ref|ZP_05185607.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
A1055]
gi|254740994|ref|ZP_05198682.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
Kruger B]
gi|254755237|ref|ZP_05207271.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
Vollum]
gi|254759773|ref|ZP_05211797.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
Australia 94]
gi|300117337|ref|ZP_07055127.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
gi|301053281|ref|YP_003791492.1| flagellar basal body rod protein [Bacillus anthracis CI]
gi|30255971|gb|AAP25606.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
Ames]
gi|47502111|gb|AAT30787.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
'Ames Ancestor']
gi|49178500|gb|AAT53876.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
Sterne]
gi|49332498|gb|AAT63144.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51977180|gb|AAU18730.1| flagellar basal-body rod protein [Bacillus cereus E33L]
gi|164714970|gb|EDR20488.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0488]
gi|167531290|gb|EDR93968.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0442]
gi|170128551|gb|EDS97418.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0389]
gi|170669998|gb|EDT20739.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0465]
gi|190562457|gb|EDV16424.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
Tsiankovskii-I]
gi|196030104|gb|EDX68704.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
gi|218535692|gb|ACK88090.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
gi|227007024|gb|ACP16767.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
684]
gi|228628240|gb|EEK84956.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
gi|228662141|gb|EEL17750.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
gi|228692647|gb|EEL46373.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
gi|228814319|gb|EEM60585.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826629|gb|EEM72400.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228832893|gb|EEM78462.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228845317|gb|EEM90353.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229266715|gb|ACQ48352.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
A0248]
gi|298725172|gb|EFI65824.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
gi|300375450|gb|ADK04354.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
str. CI]
Length = 137
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 16/115 (13%)
Query: 21 QKIVSENIANAST---PN---YRAKDI-----SSFETILNQNFLMARTHETHLKESDSSG 69
++ S NI NA+T P Y + + +SF +L+ + T+ +K ++
Sbjct: 19 MEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDGSP----TNGVKIKSIEADK 74
Query: 70 LHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMV 124
+ P G N + +T E+ + +YE NT ++ M+
Sbjct: 75 TENLVYDPTHPHANEEGYVRYPN-IDVTAEMTNVMVAQKMYEANTSVLNANKKML 128
>gi|315929129|gb|EFV08356.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni
subsp. jejuni 305]
Length = 250
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 23 IVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLD 82
+ S NIAN +T ++ K + F ++ Q A T + + S V P
Sbjct: 20 VTSNNIANVNTAGFK-KSRAEFADLMYQVMKYAGTSTS---ATTLSPSGIEVGVGVRPTA 75
Query: 83 QTTGVQVSGN 92
T V GN
Sbjct: 76 -VTKVFTEGN 84
>gi|295706287|ref|YP_003599362.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
gi|294803946|gb|ADF41012.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
Length = 149
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 17/138 (12%)
Query: 8 QIASQHANWLSERQKIVSENIANASTPN----------YRAKDI-------SSFETILNQ 50
I S R +VS N+ANA T Y+ K + SF ++L+
Sbjct: 8 NITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVMQSDRSPSFSSVLHS 67
Query: 51 NFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLY 110
+ + + + +N D V V E+ Y
Sbjct: 68 EINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVQMPNVDPLKEMTDLISATRSY 127
Query: 111 ELNTKLIKKLNSMVMHVV 128
E N + S++ +
Sbjct: 128 EANVTVFNTNKSILTKAL 145
>gi|283784085|ref|YP_003363950.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
gi|282947539|emb|CBG87091.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
Length = 400
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
++IA+ N ++E+ +S NIANA T Y++ + F + + M + +
Sbjct: 3 YEIAATGLNAVNEQLDGISNNIANAGTVGYKSMT-TDFSAMYADSQAMGVSVAGTAQSIA 61
Query: 67 SSG 69
G
Sbjct: 62 RGG 64
>gi|171059412|ref|YP_001791761.1| hypothetical protein Lcho_2731 [Leptothrix cholodnii SP-6]
gi|170776857|gb|ACB34996.1| protein of unknown function DUF1078 domain protein [Leptothrix
cholodnii SP-6]
Length = 501
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHETHLKESD 66
FQ N S+ +++ N+ANA+T +A + F + T +
Sbjct: 3 FQQGLSGLNATSKNLEVIGNNVANANTYGTKASR-AEFADMYASTINNIGTGNVGIGVQV 61
Query: 67 SSGLHWNAHVIEAPLDQTTGVQVSG 91
++ + D + ++G
Sbjct: 62 AAVSQQFTQGSLSATDNPLDMAING 86
>gi|94968682|ref|YP_590730.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
versatilis Ellin345]
gi|94550732|gb|ABF40656.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
versatilis Ellin345]
Length = 145
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 15/123 (12%)
Query: 20 RQKIVSENIANASTPN------YRAKDISSFETILNQNFLMARTHETHLKESDSSGLHWN 73
R +IV+ N+ANA T YR K + ++A+ L
Sbjct: 20 RAEIVAGNMANAETTRTAEGGPYRRKQVIFSSAQPTFGMVLAKAGGEPAIGGGVRVLDIV 79
Query: 74 AHVIEAPLDQTTGVQVSGN--------TVGITNELYKSGHIKYLYELNTKLIKKLNSMVM 125
+ L G N + E Y+LN ++ M+
Sbjct: 80 QDSRDPVLRYEPG-HPDANAEGMVAYPNIDPIEETVDLMSALRSYQLNASAVQAAKQMIQ 138
Query: 126 HVV 128
+
Sbjct: 139 QSL 141
>gi|150019059|ref|YP_001311313.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
NCIMB 8052]
gi|149905524|gb|ABR36357.1| flagellar basal body rod protein [Clostridium beijerinckii NCIMB
8052]
Length = 256
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 21 QKIVSENIANASTPNYRAKDI--SSFETILNQNFLMARTHETHLKESDSSGLHWNAHVIE 78
Q++V+ NIAN + Y+ +++ SSFE ++ N + + + + + +E
Sbjct: 19 QEVVTNNIANVNNTGYKKRELTKSSFEDVMISNRQKLVGDKYVKNDIGNLNMGVKVNDVE 78
Query: 79 APLDQTTGVQVSGNT 93
Q T
Sbjct: 79 TVFTQGAFKSTDSMT 93
>gi|254227983|ref|ZP_04921413.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
gi|262396035|ref|YP_003287888.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
gi|151939479|gb|EDN58307.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
gi|262339629|gb|ACY53423.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
Length = 398
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%)
Query: 48 LNQNFLMARTHETHLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIK 107
+A+ T +S SSG L T + G+ V +T+EL +
Sbjct: 315 FANTQGLAKVSGTAWTQSFSSGAPITGVPGSGTLGDLTPGALEGSNVDLTSELVALMTAQ 374
Query: 108 YLYELNTKLIKKLNSMVMH 126
Y+ N K I + +
Sbjct: 375 RNYQANAKTISTSDKLTQA 393
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.145 0.432
Lambda K H
0.267 0.0448 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,478,704,459
Number of Sequences: 14124377
Number of extensions: 90140816
Number of successful extensions: 257606
Number of sequences better than 10.0: 3911
Number of HSP's better than 10.0 without gapping: 2789
Number of HSP's successfully gapped in prelim test: 2011
Number of HSP's that attempted gapping in prelim test: 251362
Number of HSP's gapped (non-prelim): 6228
length of query: 130
length of database: 4,842,793,630
effective HSP length: 96
effective length of query: 34
effective length of database: 3,486,853,438
effective search space: 118553016892
effective search space used: 118553016892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 76 (33.8 bits)