HHsearch alignment for GI: 254780382 and conserved domain: COG1875

>COG1875 NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].

Probab=96.12  E-value=0.046  Score=32.16  Aligned_cols=39  Identities=23%  Similarity=0.476  Sum_probs=19.7

Q ss_pred             CCCCEEEEEHHHHHHHHCCCCCCEEEEEC----CCCCHHHHHHHHH
Q ss_conf             35523888846646440788765002002----4677899887521
Q gi|254780382|r  293 EGTIQLMVASDLAARGLDIPDVGHVFNFD----VPNRAENYIHRIG  334 (465)
Q Consensus       293 ~g~~~vLV~Td~~~~GiDip~v~~VI~~d----~P~~~~~y~hR~G  334 (465)
T Consensus       334 ~~~iev~alt~--IRGRSl~~-~FiIIDEaQNLTpheikTiltR~G  376 (436)
T COG1875         334 RGRIEVEALTY--IRGRSLPD-SFIIIDEAQNLTPHELKTILTRAG  376 (436)
T ss_pred             CCCEEEEEEEE--ECCCCCCC-CEEEEEHHHCCCHHHHHHHHHHHC
T ss_conf             15425665201--31665553-069971212178888899987606