HHsearch alignment for GI: 254780382 and conserved domain: COG3421
>COG3421 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.49 E-value=0.00023 Score=47.00 Aligned_cols=150 Identities=19% Similarity=0.251 Sum_probs=65.8
Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCC----CC
Q ss_conf 98279851789999999999860652147827999828589999999998-74102333221000012222222----22
Q gi|254780382|r 43 GIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNF-EKYGKNYNLTVALLIGGIPFEAQ----NK 117 (465)
Q Consensus 43 ~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~-~~~~~~~~l~~~~~~gg~~~~~~----~~ 117 (465)
T Consensus 2 f~matgsgkt~~ma~lil~~y~kgyr~-----flffvnq~nilekt~~nftd~~s~kylf~e~i~~~d~~i~ikkvn~fs 76 (812)
T COG3421 2 FEMATGSGKTLVMAGLILECYKKGYRN-----FLFFVNQANILEKTKLNFTDSVSSKYLFSENININDENIEIKKVNNFS 76 (812)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCHHH-----EEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 643358870059999999999734041-----899852116888888614661556676666663278620245411467
Q ss_pred CCCCHHHHHHCCCCHHHHHHHCCC---C---CCCCCEE-ECCCCCCCCCCCC---------CHHHHHH-HHHHHC--CCC
Q ss_conf 221011221022102333320000---0---0121001-0255100000001---------0035788-754310--222
Q gi|254780382|r 118 KLERGADVLICTPGRILDHFNRGK---L---LMNNIEI-LVIDEADRMLDMG---------FIPYIQN-ITSLVP--FTR 178 (465)
Q Consensus 118 ~l~~~~~IiV~TP~rl~~~l~~~~---~---~l~~~~~-lViDEah~l~~~g---------f~~~i~~-i~~~~~--~~~ 178 (465)
T Consensus 77 ehnd~iei~fttiq~l~~d~~~~ken~itledl~~~klvfl~deahhln~~tkkk~~de~~~~~~we~~v~la~~~nkd~ 156 (812)
T COG3421 77 EHNDAIEIYFTTIQGLFSDFTRAKENAITLEDLKDQKLVFLADEAHHLNTETKKKLNDEASEKRNWESVVKLALEQNKDN 156 (812)
T ss_pred CCCCCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 56785479972258889888762124413866853836897241544205543101317787760999999987549874
Q ss_pred CCCCCCCCCCCCCCCCCCCC
Q ss_conf 22333432112222111122
Q gi|254780382|r 179 QTLLFSATMTDELQKVSENF 198 (465)
Q Consensus 179 q~i~~SAT~~~~v~~l~~~~ 198 (465)
T Consensus 157 ~~lef~at~~k~-k~v~~ky 175 (812)
T COG3421 157 LLLEFSATIPKE-KSVEDKY 175 (812)
T ss_pred EEEHHHHCCCCC-CCHHHHH
T ss_conf 440123148853-3588873