HHsearch alignment for GI: 254780382 and conserved domain: COG3973
>COG3973 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=96.30 E-value=0.049 Score=32.00 Aligned_cols=92 Identities=17% Similarity=0.178 Sum_probs=53.2
Q ss_pred CCCCHHH-HHHHHHCCCCCCCHH----HHHHHHHHHC--CCCEEEECCCCCCHHHHHHHHHHHH-HHCCCCCCCCCEEEE
Q ss_conf 6988899-999997879878989----9999999976--9979998279851789999999999-860652147827999
Q gi|254780382|r 6 LGLSPKV-VCAVLDAGYVKPTPI----QIKTIPLVLQ--RHDVCGIAQTGTGKTASFVLPMLTI-LEKGRARVRMPRTLI 77 (465)
Q Consensus 6 l~l~~~l-~~~l~~~~~~~pt~i----Q~~~i~~~l~--g~dvi~~apTGsGKT~~~~lp~l~~-l~~~~~~~~~~~~li 77 (465)
T Consensus 187 ~~~~dEvL~~~Lek~ss~~mrdIV~TIQkEQneIIR~ek~~ilVVQGaAGSGKTtiALH-RvAyLlY~~R~~l~~k~vlv 265 (747)
T COG3973 187 TGGRDEVLQRVLEKNSSAKMRDIVETIQKEQNEIIRFEKNKILVVQGAAGSGKTTIALH-RVAYLLYGYRGPLQAKPVLV 265 (747)
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCEEE
T ss_conf 85389999999986263127789998617677787555787489955888871358899-99999853566246686599
Q ss_pred ECCCHHHHHHHHHHHHHHCCC
Q ss_conf 828589999999998741023
Q gi|254780382|r 78 LEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 78 l~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 266 l~PN~vFleYis~VLPeLGe~ 286 (747)
T COG3973 266 LGPNRVFLEYISRVLPELGEE 286 (747)
T ss_pred ECCCHHHHHHHHHHCHHHCCC
T ss_conf 828389999998755441668