HHsearch alignment for GI: 254780382 and conserved domain: COG5008
>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=92.74 E-value=0.23 Score=27.66 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=21.5
Q ss_pred ECCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCC
Q ss_conf 213443222222222233222-223454203332344442013
Q gi|254780382|r 252 CNQKKNVVNLCHSLEKQGFSV-CAIHGNIDQRSRMKILSNFKE 293 (465)
Q Consensus 252 ~~t~~~~~~l~~~L~~~g~~v-~~lhg~l~~~~R~~~~~~F~~ 293 (465)
T Consensus 209 vRsretMey-Ai~fAeTGHLcmaTLHAN~anQaleRIinffP~ 250 (375)
T COG5008 209 VRSRETMEY-AIQFAETGHLCMATLHANNANQALERIINFFPE 250 (375)
T ss_pred CCCHHHHHH-HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCH
T ss_conf 043767999-998873286589985057715789999863968