HHsearch alignment for GI: 254780382 and conserved domain: COG5008

>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=92.74  E-value=0.23  Score=27.66  Aligned_cols=41  Identities=15%  Similarity=0.301  Sum_probs=21.5

Q ss_pred             ECCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCC
Q ss_conf             213443222222222233222-223454203332344442013
Q gi|254780382|r  252 CNQKKNVVNLCHSLEKQGFSV-CAIHGNIDQRSRMKILSNFKE  293 (465)
Q Consensus       252 ~~t~~~~~~l~~~L~~~g~~v-~~lhg~l~~~~R~~~~~~F~~  293 (465)
T Consensus       209 vRsretMey-Ai~fAeTGHLcmaTLHAN~anQaleRIinffP~  250 (375)
T COG5008         209 VRSRETMEY-AIQFAETGHLCMATLHANNANQALERIINFFPE  250 (375)
T ss_pred             CCCHHHHHH-HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCH
T ss_conf             043767999-998873286589985057715789999863968