HHsearch alignment for GI: 254780382 and conserved domain: KOG1000
>KOG1000 consensus.
Probab=99.51 E-value=2.4e-13 Score=104.97 Aligned_cols=326 Identities=15% Similarity=0.203 Sum_probs=183.9
Q ss_pred CCCHHHHHHHHHHH-CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 78989999999997-69979998279851789999999999860652147827999828589999999998741023332
Q gi|254780382|r 23 KPTPIQIKTIPLVL-QRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNL 101 (465)
Q Consensus 23 ~pt~iQ~~~i~~~l-~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~~~l 101 (465)
T Consensus 198 ~LlPFQreGv~faL~RgGR~llADeMGLGKTiQA-l-aIA~yyraEw----p-lliVcPAs-vrftWa~al~r~lps~-~ 268 (689)
T KOG1000 198 RLLPFQREGVIFALERGGRILLADEMGLGKTIQA-L-AIARYYRAEW----P-LLIVCPAS-VRFTWAKALNRFLPSI-H 268 (689)
T ss_pred HHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHH-H-HHHHHHHHCC----C-EEEEECHH-HHHHHHHHHHHHCCCC-C
T ss_conf 6170356547889853873998412454168899-9-9999986048----6-79992278-8689999999853102-6
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 21000012222222222210112210221023333200000012100102551000000010035788754310222223
Q gi|254780382|r 102 TVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTL 181 (465)
Q Consensus 102 ~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~~~q~i 181 (465)
T Consensus 269 pi~vv~~~~D~~~~---~~t~~~v~ivSye~ls-~l-~~~l~~~~~~vvI~DEsH~Lk~sk-tkr~Ka~~dllk~akhvI 342 (689)
T KOG1000 269 PIFVVDKSSDPLPD---VCTSNTVAIVSYEQLS-LL-HDILKKEKYRVVIFDESHMLKDSK-TKRTKAATDLLKVAKHVI 342 (689)
T ss_pred CEEEEECCCCCCCC---CCCCCEEEEEEHHHHH-HH-HHHHHCCCCEEEEEECHHHHHCCC-HHHHHHHHHHHHHHHHEE
T ss_conf 04788526677654---5667727898789999-99-998736541189971256541011-223666656998764447
Q ss_pred CCCCCCC--CCC-----------------CCCCCCCCCCCCCCC-----------------------CCC-----CCCCC
Q ss_conf 3343211--222-----------------211112222210013-----------------------444-----32123
Q gi|254780382|r 182 LFSATMT--DEL-----------------QKVSENFLQNPKRIE-----------------------VNT-----PSSTA 214 (465)
Q Consensus 182 ~~SAT~~--~~v-----------------~~l~~~~l~~~~~i~-----------------------v~~-----~~~~~ 214 (465)
T Consensus 343 LLSGTPavSRP~elytqi~avd~tlfp~f~efa~rYCd~-k~vr~~~Dykg~tnl~EL~~lL~k~lMIRRlK~dvL~qLP 421 (689)
T KOG1000 343 LLSGTPAVSRPSELYTQIRAVDHTLFPNFHEFAIRYCDG-KQVRFCFDYKGCTNLEELAALLFKRLMIRRLKADVLKQLP 421 (689)
T ss_pred EECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC-CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 723885567814421355541210042289987775376-4110245037787789999999999999999998875388
Q ss_pred CCCCCCCCCC----------------------CCCCCH--------------H-HHHHHHCCC----CCCCCCEEEEEEC
Q ss_conf 4642111112----------------------222110--------------2-444321012----2345650677621
Q gi|254780382|r 215 ETIEHCFVAT----------------------YAQYSK--------------K-CALLQQLLQ----SQDTMKNGIIFCN 253 (465)
Q Consensus 215 ~~i~~~~~~~----------------------~~~~~~--------------k-~~~l~~l~~----~~~~~~k~iIF~~ 253 (465)
T Consensus 422 pK-rr~Vv~~~~gr~da~~~~lv~~a~~~t~~~~~e~~~~~l~l~y~~tgiaK~~av~eyi~~~~~l~d~~~~KflVFaH 500 (689)
T KOG1000 422 PK-RREVVYVSGGRIDARMDDLVKAAADYTKVNSMERKHESLLLFYSLTGIAKAAAVCEYILENYFLPDAPPRKFLVFAH 500 (689)
T ss_pred CC-CEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEH
T ss_conf 01-04899974786226789999875320012366665677887898751102088999997474445688735999941
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCEE-EEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
Q ss_conf 34432222222222332222234542033323444420135-5238-888466464407887650020024677899887
Q gi|254780382|r 254 QKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEG-TIQL-MVASDLAARGLDIPDVGHVFNFDVPNRAENYIH 331 (465)
Q Consensus 254 t~~~~~~l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g-~~~v-LV~Td~~~~GiDip~v~~VI~~d~P~~~~~y~h 331 (465)
T Consensus 501 H~~vLd~Iq~~~~~r~vg~IRIDGst~s~~R~ll~qsFQ~seev~VAvlsItA~gvGLt~tAa~~VVFaEL~wnPgvLlQ 580 (689)
T KOG1000 501 HQIVLDTIQVEVNKRKVGSIRIDGSTPSHRRTLLCQSFQTSEEVRVAVLSITAAGVGLTLTAASVVVFAELHWNPGVLLQ 580 (689)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCEEEEEEECCCCCEEEE
T ss_conf 48799999999987479758856989843478999873146314799999863144414651325899982378754775
Q ss_pred HHHCCCCCCCCEEE--EEEECHH--HHHHHHHHHHHHC
Q ss_conf 52102458885399--9977888--9999999999962
Q gi|254780382|r 332 RIGRTGRAGRHGKA--FTLVAKE--DIKHIDAIEKLIE 365 (465)
Q Consensus 332 R~GR~gR~g~~G~~--i~~~~~~--d~~~~~~i~~~~~ 365 (465)
T Consensus 581 AEDRaHRiGQkssV~v~ylvAKgT~Ddy~Wp~l~~KL~ 618 (689)
T KOG1000 581 AEDRAHRIGQKSSVFVQYLVAKGTADDYMWPMLQQKLD 618 (689)
T ss_pred CHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 14656640566511389999548457777899999987