HHsearch alignment for GI: 254780382 and conserved domain: KOG1001

Probab=96.15  E-value=0.0016  Score=41.62  Aligned_cols=110  Identities=23%  Similarity=0.251  Sum_probs=60.5

Q ss_pred             EEECCCCCCHHHHH-HHHHHHHHHCCC--CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99827985178999-999999986065--214782799982858999999999874102333221000012222222222
Q gi|254780382|r   42 CGIAQTGTGKTASF-VLPMLTILEKGR--ARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK  118 (465)
Q Consensus        42 i~~apTGsGKT~~~-~lp~l~~l~~~~--~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~  118 (465)
T Consensus       156 Iladd~glgkt~~ti~l~l~~~~~~~~~~~~~~~kttLivcp~-s~~~qW~~elek~~~~~~l~v~v~~g---r~kd~~e  231 (674)
T KOG1001         156 ILADDMGLGKTVKTIALILKQKLKSKEEDRQKEFKTTLIVCPT-SLLTQWKTELEKVTEEDKLSIYVYHG---RTKDKSE  231 (674)
T ss_pred             EEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCH-HHHHHHHHHHHCCCCCCCEEEEEECC---CCCCCCH
T ss_conf             6765101415899999999643677102330246743696665-88888888873358866469999616---4243313


Q ss_pred             CCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCC
Q ss_conf             210112210221023333200000012100102551000000
Q gi|254780382|r  119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLD  160 (465)
Q Consensus       119 l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~  160 (465)
T Consensus       232 -l~~~dvVltTy~il~~----~~l~~i~w~Riildea~~ikn  268 (674)
T KOG1001         232 -LNSYDVVLTTYDILKN----SPLVKIKWLRIVLDEAHTIKN  268 (674)
T ss_pred             -HCCCCEEEEEHHHHHC----CCCCCEEEEEEEECCCCCCCC
T ss_conf             -4177669933788515----350012578887012002678