HHsearch alignment for GI: 254780382 and conserved domain: PRK00440
>PRK00440 rfc replication factor C small subunit; Reviewed.
Probab=96.74 E-value=0.014 Score=35.43 Aligned_cols=41 Identities=17% Similarity=0.279 Sum_probs=25.3
Q ss_pred CCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 2100102551000000010035788754310222223334321
Q gi|254780382|r 145 NNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLLFSATM 187 (465)
Q Consensus 145 ~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~~~q~i~~SAT~ 187 (465)
T Consensus 100 ~~~kiiiiDE~d~l~~~a-q~aL~~~mE~~~~~~~fi-l~~n~ 140 (318)
T PRK00440 100 APFKIIFLDEADNLTSDA-QQALRRTMEMYSQTTRFI-LSCNY 140 (318)
T ss_pred CCEEEEEEECCCCCCHHH-HHHHHHHHHCCCCCCEEE-EECCC
T ss_conf 973899986855322556-788876431056662588-63488