HHsearch alignment for GI: 254780382 and conserved domain: PRK01297

>PRK01297 ATP-dependent RNA helicase RhlB; Provisional.
Probab=91.85  E-value=0.12  Score=29.61  Aligned_cols=69  Identities=19%  Similarity=0.366  Sum_probs=31.0

Q ss_pred             EEEEEECCCCCCCCCCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHH-----HHHHH-HCCCCCCE
Q ss_conf             06776213443222222222----2332222234542033323444420135523888846-----64644-07887650
Q gi|254780382|r  247 NGIIFCNQKKNVVNLCHSLE----KQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASD-----LAARG-LDIPDVGH  316 (465)
Q Consensus       247 k~iIF~~t~~~~~~l~~~L~----~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td-----~~~~G-iDip~v~~  316 (465)
T Consensus       161 ~aLIL~PTRELa~QI~~~~~~L~~~~~l~v~~~~GG~~~~~q---~~~l~~~~~dIvVaTPGRL~~l~~~~~~~l~~v~~  237 (472)
T PRK01297        161 RALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQ---LKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEV  237 (472)
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH---HHHHHCCCCCEEEECHHHHHHHHCCCCEECCCCEE
T ss_conf             299987999999999999999746279769999789887999---99985589988997979999874348254255229


Q ss_pred             EE
Q ss_conf             02
Q gi|254780382|r  317 VF  318 (465)
Q Consensus       317 VI  318 (465)
T Consensus       238 lV  239 (472)
T PRK01297        238 MV  239 (472)
T ss_pred             EE
T ss_conf             99