HHsearch alignment for GI: 254780382 and conserved domain: PRK04195
>PRK04195 replication factor C large subunit; Provisional.
Probab=96.30 E-value=0.02 Score=34.46 Aligned_cols=41 Identities=12% Similarity=0.276 Sum_probs=22.6
Q ss_pred CCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 10010255100000001003578875431022222333432
Q gi|254780382|r 146 NIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLLFSAT 186 (465)
Q Consensus 146 ~~~~lViDEah~l~~~gf~~~i~~i~~~~~~~~q~i~~SAT 186 (465)
T Consensus 99 ~~KlIIlDEvD~l~~~~d~gg~~al~~~ik~s~~PiIli~N 139 (403)
T PRK04195 99 KRKLILLDEVDGIHGNADRGGVRAILEIIKKAKNPIILTAN 139 (403)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 73499963434457244479999999998548870899826