HHsearch alignment for GI: 254780382 and conserved domain: PRK04914
>PRK04914 ATP-dependent helicase HepA; Validated.
Probab=99.96 E-value=2.5e-29 Score=208.07 Aligned_cols=307 Identities=21% Similarity=0.337 Sum_probs=181.3
Q ss_pred CCCHHHHHHHHHHHCCC--CEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH-HHHCCCC
Q ss_conf 78989999999997699--79998279851789999999999860652147827999828589999999998-7410233
Q gi|254780382|r 23 KPTPIQIKTIPLVLQRH--DVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNF-EKYGKNY 99 (465)
Q Consensus 23 ~pt~iQ~~~i~~~l~g~--dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~-~~~~~~~ 99 (465)
T Consensus 151 ~l~pHQ~~ia~~v~~r~~PRvLLADEVGLGKTIEAGLIl~ell~rgra----~RvLIvvP~-~L~~QW~~EL~~KF~L~f 225 (955)
T PRK04914 151 GLIPHQLYIAHEVGRRHAPRVLLADEVGLGKTIEAGLIIHQQLLTGRA----ERVLIIVPE-TLQHQWLVEMLRRFNLRF 225 (955)
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC----CEEEEECCH-HHHHHHHHHHHHHCCCCC
T ss_conf 656379999999971458848970588886899999999999974877----779999277-998999999999839980
Q ss_pred CCCCCCCCCC--CCC-CCCCCCCCCHHHHHHCCCCHHHHHHHCCC-----CCCCCCEEECCCCCCCCCC--CCCHHHHHH
Q ss_conf 3221000012--222-22222221011221022102333320000-----0012100102551000000--010035788
Q gi|254780382|r 100 NLTVALLIGG--IPF-EAQNKKLERGADVLICTPGRILDHFNRGK-----LLMNNIEILVIDEADRMLD--MGFIPYIQN 169 (465)
Q Consensus 100 ~l~~~~~~gg--~~~-~~~~~~l~~~~~IiV~TP~rl~~~l~~~~-----~~l~~~~~lViDEah~l~~--~gf~~~i~~ 169 (465)
T Consensus 226 ----~i~D~~r~~~~~~~~~NpF~~-~~~vI~S----ld~l~~~~~~~e~l~~a~WDLVIVDEAHhL~~~~~~~s~~y-~ 295 (955)
T PRK04914 226 ----SLFDEERCAEAQADADNPFET-EQLVICS----LDFLRKNKKRLEQALDAEWDLLVVDEAHHLVWSEEAPSREY-Q 295 (955)
T ss_pred ----EEECCHHHHHHHCCCCCCCCC-CCEEEEE----HHHHCCCHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCHHH-H
T ss_conf ----995518888753357997545-8979987----89960396789987338988899713445305887888799-9
Q ss_pred HHHHH-CCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCC----------------------CCCC--------------
Q ss_conf 75431-022222333432112-2221-1112222210013----------------------4443--------------
Q gi|254780382|r 170 ITSLV-PFTRQTLLFSATMTD-ELQK-VSENFLQNPKRIE----------------------VNTP-------------- 210 (465)
Q Consensus 170 i~~~~-~~~~q~i~~SAT~~~-~v~~-l~~~~l~~~~~i~----------------------v~~~-------------- 210 (465)
T Consensus 296 lve~La~~~~~lLLLTATP~QlG~e~~Fa~L~LLDPdrF~d~~~F~~e~~~y~~va~~v~~L~~~~~l~~~~~~~l~~~l 375 (955)
T PRK04914 296 VVEQLAEVIPGVLLLTATPEQLGQESHFARLRLLDPDRFHDYEAFVEEEQQYRPVADAVQALLDGEKLSDDALNALGELL 375 (955)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 99999851597699847998898666898852779421158888998887557899999986315668889999999986
Q ss_pred ---------------------------------CCC--------CCCCC---CC-----CCCCCC---------------
Q ss_conf ---------------------------------212--------34642---11-----111222---------------
Q gi|254780382|r 211 ---------------------------------SST--------AETIE---HC-----FVATYA--------------- 226 (465)
Q Consensus 211 ---------------------------------~~~--------~~~i~---~~-----~~~~~~--------------- 226 (465)
T Consensus 376 ~e~~~~~l~~~~~~~~~~~~~~r~~li~~Lldr~gtgrvlfRntRa~v~gfp~R~l~~~~l~~~~~~~~~~~~~~~~~~~ 455 (955)
T PRK04914 376 GEQDIEPLLQAINSDSEDAQAARQELISELLDRHGTGRVLFRNTRAAVKGFPKRELHPYPLPLPEQYQTAIRKSLEARAR 455 (955)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 44114478987521444569999999999986232157777656777431655453105678715678765432324678
Q ss_pred --------------------CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHH
Q ss_conf --------------------21102444321012234565067762134432222222222-332222234542033323
Q gi|254780382|r 227 --------------------QYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEK-QGFSVCAIHGNIDQRSRM 285 (465)
Q Consensus 227 --------------------~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~-~g~~v~~lhg~l~~~~R~ 285 (465)
T Consensus 456 ~~l~~E~~~~~~~~~~~~~~~~D~rv~~Li~~Lk~~-~~eKvLVFte~~~Ta~~L~~~Lr~~~Gi~~avfh~gms~~ERd 534 (955)
T PRK04914 456 DMLYPEQIYQEFEGDNATWWNFDPRVEWLIDFLKSH-RSEKVLVICAKAETALQLEQALREREGIRAAVFHEGMSIIERD 534 (955)
T ss_pred HHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC-CCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
T ss_conf 751735666545655655421388999999999857-7985899968389999999999875599569970999989999
Q ss_pred HHHHHHCCCC--CEEEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 4444201355--23888846646440788765002002467789988752102458885399
Q gi|254780382|r 286 KILSNFKEGT--IQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKA 345 (465)
Q Consensus 286 ~~~~~F~~g~--~~vLV~Td~~~~GiDip~v~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~ 345 (465)
T Consensus 535 raaa~Fa~~e~gaqVLI~TEagsEG~NLQF~~~LVnyDLPWNP~rLEQRIGRlDRiGQ~~dV 596 (955)
T PRK04914 535 RAAAYFADEEDGAQVLLCSEIGSEGRNFQFASHLVLFDLPFNPDLLEQRIGRLDRIGQKHDI 596 (955)
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 99998617677851999725212450377743523525898765889985206542786750