HHsearch alignment for GI: 254780382 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=95.73 E-value=0.067 Score=31.13 Aligned_cols=22 Identities=32% Similarity=0.419 Sum_probs=18.0
Q ss_pred HHHHCCCCEEEECCCCCCHHHH
Q ss_conf 9997699799982798517899
Q gi|254780382|r 33 PLVLQRHDVCGIAQTGTGKTAS 54 (465)
Q Consensus 33 ~~~l~g~dvi~~apTGsGKT~~ 54 (465)
T Consensus 93 ~fi~~~~Nvil~G~~GtGKThL 114 (254)
T PRK06526 93 DFVTGKENVVFLGPPGTGKTHL 114 (254)
T ss_pred CHHHCCCCEEEECCCCCCHHHH
T ss_conf 1776588789989999868999