HHsearch alignment for GI: 254780382 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=93.50 E-value=0.39 Score=26.20 Aligned_cols=142 Identities=17% Similarity=0.201 Sum_probs=57.2
Q ss_pred HHHHHHHHH----CCC---CEEEECCCCCCHH-HHHHHHHHHHHHCCCCCCC-----CCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 999999997----699---7999827985178-9999999999860652147-----82799982858999999999874
Q gi|254780382|r 28 QIKTIPLVL----QRH---DVCGIAQTGTGKT-ASFVLPMLTILEKGRARVR-----MPRTLILEPTRELAAQVADNFEK 94 (465)
Q Consensus 28 Q~~~i~~~l----~g~---dvi~~apTGsGKT-~~~~lp~l~~l~~~~~~~~-----~~~~lil~PtreLa~Qi~~~~~~ 94 (465)
T Consensus 22 qe~~~~~L~~a~~~grl~HA~Lf~Gp~GiGK~tlA~~~A--~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i~~---- 95 (363)
T PRK07471 22 HAAAEAALLDAYRSGRLHHAWLIGGPQGIGKATLAYRMA--RFLLATPPPGGDAVFPPPASLAVDPDHPVARRIAA---- 95 (363)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH--HHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHC----
T ss_conf 199999999999859976458767999818899999999--99857999777776787053125877728999952----
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 10233322100001222222222221011221022102333320000001210010255100000001003578875431
Q gi|254780382|r 95 YGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLV 174 (465)
Q Consensus 95 ~~~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~ 174 (465)
T Consensus 96 -~~hpdl~~--i~r~~--d~k~~~~--~~~I~Vd~iR~l~~~~~~~p-~~g~~kV~IId~ad~mn~~a-aNALLK~LEEP 166 (363)
T PRK07471 96 -GAHGGLLT--LERSW--NEKGKRL--RTVITVDEVRETIGFFGLTA-AEGGWRVVIVDTADEMNANA-ANALLKVLEEP 166 (363)
T ss_pred -CCCCCEEE--EECCC--CCCCCCC--CCCCCHHHHHHHHHHHCCCC-CCCCCEEEEEECHHHHCHHH-HHHHHHHHCCC
T ss_conf -69998466--76200--1133321--24453999999999972485-24896699986878738899-99999972158
Q ss_pred CCCCCCCCCC
Q ss_conf 0222223334
Q gi|254780382|r 175 PFTRQTLLFS 184 (465)
Q Consensus 175 ~~~~q~i~~S 184 (465)
T Consensus 167 P~~t~fiLit 176 (363)
T PRK07471 167 PARSLLLLVS 176 (363)
T ss_pred CCCEEEEEEE
T ss_conf 9883899863