HHsearch alignment for GI: 254780382 and conserved domain: PRK07471

>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=93.50  E-value=0.39  Score=26.20  Aligned_cols=142  Identities=17%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             HHHHHHHHH----CCC---CEEEECCCCCCHH-HHHHHHHHHHHHCCCCCCC-----CCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             999999997----699---7999827985178-9999999999860652147-----82799982858999999999874
Q gi|254780382|r   28 QIKTIPLVL----QRH---DVCGIAQTGTGKT-ASFVLPMLTILEKGRARVR-----MPRTLILEPTRELAAQVADNFEK   94 (465)
Q Consensus        28 Q~~~i~~~l----~g~---dvi~~apTGsGKT-~~~~lp~l~~l~~~~~~~~-----~~~~lil~PtreLa~Qi~~~~~~   94 (465)
T Consensus        22 qe~~~~~L~~a~~~grl~HA~Lf~Gp~GiGK~tlA~~~A--~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i~~----   95 (363)
T PRK07471         22 HAAAEAALLDAYRSGRLHHAWLIGGPQGIGKATLAYRMA--RFLLATPPPGGDAVFPPPASLAVDPDHPVARRIAA----   95 (363)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH--HHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHC----
T ss_conf             199999999999859976458767999818899999999--99857999777776787053125877728999952----


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             10233322100001222222222221011221022102333320000001210010255100000001003578875431
Q gi|254780382|r   95 YGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLV  174 (465)
Q Consensus        95 ~~~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~  174 (465)
T Consensus        96 -~~hpdl~~--i~r~~--d~k~~~~--~~~I~Vd~iR~l~~~~~~~p-~~g~~kV~IId~ad~mn~~a-aNALLK~LEEP  166 (363)
T PRK07471         96 -GAHGGLLT--LERSW--NEKGKRL--RTVITVDEVRETIGFFGLTA-AEGGWRVVIVDTADEMNANA-ANALLKVLEEP  166 (363)
T ss_pred             -CCCCCEEE--EECCC--CCCCCCC--CCCCCHHHHHHHHHHHCCCC-CCCCCEEEEEECHHHHCHHH-HHHHHHHHCCC
T ss_conf             -69998466--76200--1133321--24453999999999972485-24896699986878738899-99999972158


Q ss_pred             CCCCCCCCCC
Q ss_conf             0222223334
Q gi|254780382|r  175 PFTRQTLLFS  184 (465)
Q Consensus       175 ~~~~q~i~~S  184 (465)
T Consensus       167 P~~t~fiLit  176 (363)
T PRK07471        167 PARSLLLLVS  176 (363)
T ss_pred             CCCEEEEEEE
T ss_conf             9883899863