HHsearch alignment for GI: 254780382 and conserved domain: PRK08699
>PRK08699 DNA polymerase III subunit delta'; Validated.
Probab=93.83 E-value=0.2 Score=28.07 Aligned_cols=142 Identities=15% Similarity=0.115 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHCC-----CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH--C
Q ss_conf 898999999999769-----979998279851789999999999860652147827999828589999999998741--0
Q gi|254780382|r 24 PTPIQIKTIPLVLQR-----HDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKY--G 96 (465)
Q Consensus 24 pt~iQ~~~i~~~l~g-----~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~--~ 96 (465)
T Consensus 2 iypW~~~~w~~l~~~~~rl~HA~L~~Gp~G~Gk~~-~A~~~A~~llC~~~~~~~-~~Cg~C~----------sC~~~~~g 69 (325)
T PRK08699 2 IYPWHQEQWRQIAEHWERRPNAWLFVGKKGTGKTA-FARFAAKALLCETPAPGC-KPCGECM----------SCHLFGQG 69 (325)
T ss_pred CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHH-HHHHHHHHHHCCCCCCCC-CCCCCCH----------HHHHHHCC
T ss_conf 88745799999998344501179757999978999-999999998289998889-9898888----------89998659
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 23332210000122222222222101122102210233332000000121001025510000000100357887543102
Q gi|254780382|r 97 KNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPF 176 (465)
Q Consensus 97 ~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~ 176 (465)
T Consensus 70 ~HPD~~~i~p~~~~~--~~g~---~~~~I~idqiR~l~~~~~~~~-~~~~~kV~ii~~ae~mn~~a-aNaLLK~LEEPp~ 142 (325)
T PRK08699 70 SHPDFYEITPLADEP--ENGR---KLLQIKIDAVREIIDNVYLTS-VRGGLRVILIHPAESMNVQA-ANSLLKVLEEPPP 142 (325)
T ss_pred CCCCEEEEECCCCCC--CCCC---CCCCCCHHHHHHHHHHHCCCC-CCCCCEEEEECCHHHHCHHH-HHHHHHHHCCCCC
T ss_conf 999968851344530--0166---556676999999999971086-56894699985777758999-9999998417888
Q ss_pred CCCCCCCC
Q ss_conf 22223334
Q gi|254780382|r 177 TRQTLLFS 184 (465)
Q Consensus 177 ~~q~i~~S 184 (465)
T Consensus 143 ~~~fiL~t 150 (325)
T PRK08699 143 QVVFLLVS 150 (325)
T ss_pred CEEEEEEE
T ss_conf 84899987