HHsearch alignment for GI: 254780382 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=96.96 E-value=0.0041 Score=38.96 Aligned_cols=141 Identities=14% Similarity=0.143 Sum_probs=62.1
Q ss_pred CCCCHHHHHHHHHHH----CCC---CEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 878989999999997----699---7999827985178999999999986065214782799982858999999999874
Q gi|254780382|r 22 VKPTPIQIKTIPLVL----QRH---DVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEK 94 (465)
Q Consensus 22 ~~pt~iQ~~~i~~~l----~g~---dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~ 94 (465)
T Consensus 3 ~~~~PWq~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~-A~~~A~~llc~~~~~~~--~---~~-------~~-~~i~ 68 (319)
T PRK08769 3 SAFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAV-ALALAEHVLASGPDPAL--A---QR-------TR-QLIA 68 (319)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH-HHHHHHHHHCCCCCCCC--C---CH-------HH-HHHH
T ss_conf 5558776899999999997699420687589998789999-99999998379979765--4---33-------88-9996
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 10233322100001222222222221011221022102333320000001210010255100000001003578875431
Q gi|254780382|r 95 YGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLV 174 (465)
Q Consensus 95 ~~~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~ 174 (465)
T Consensus 69 ~g~HPD~~~i~~~~~~----~~~k~k--~~I~IdqiR~l~~~~~~~p-~~g~~KV~IId~Ad~mn~~A-aNalLK~LEEP 140 (319)
T PRK08769 69 AGTHPDLQLVSFIPNR----TGDKLR--TEIVIEQVREISQKLALTP-QYGIAQVVIVDPADAINRSA-CNALLKTLEEP 140 (319)
T ss_pred CCCCCCEEEEECCCCC----CCCCCC--CCCCHHHHHHHHHHHHHCC-CCCCCEEEEECCHHHCCHHH-HHHHHHHHCCC
T ss_conf 6899896877534444----543112--3486999999999961372-02795699980667528999-99999982279
Q ss_pred CCCCCCCCCC
Q ss_conf 0222223334
Q gi|254780382|r 175 PFTRQTLLFS 184 (465)
Q Consensus 175 ~~~~q~i~~S 184 (465)
T Consensus 141 p~~~~~iL~~ 150 (319)
T PRK08769 141 SPGRYLWLIS 150 (319)
T ss_pred CCCEEEEEEE
T ss_conf 9884899986