HHsearch alignment for GI: 254780382 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=95.57 E-value=0.1 Score=30.01 Aligned_cols=46 Identities=15% Similarity=0.251 Sum_probs=26.5
Q ss_pred HHHCCCCEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
Q ss_conf 99769979998279851789-9999999998606521478279998285899999
Q gi|254780382|r 34 LVLQRHDVCGIAQTGTGKTA-SFVLPMLTILEKGRARVRMPRTLILEPTRELAAQ 87 (465)
Q Consensus 34 ~~l~g~dvi~~apTGsGKT~-~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Q 87 (465)
T Consensus 97 fi~~~~Nvil~G~~GtGKThLA~Alg-~~A~~------~G~~v~f~~-~~~L~~~ 143 (258)
T PRK09183 97 FIERNENIVLLGPSGVGKTHLAIALG-YEAVR------AGIKVRFTT-AADLLLQ 143 (258)
T ss_pred HHHCCCCEEEECCCCCCHHHHHHHHH-HHHHH------CCCEEEEEE-HHHHHHH
T ss_conf 66558867998999986899999999-99998------799399978-9999999