HHsearch alignment for GI: 254780382 and conserved domain: PRK09200
>PRK09200 preprotein translocase subunit SecA; Reviewed.
Probab=99.87 E-value=1.7e-20 Score=151.09 Aligned_cols=324 Identities=19% Similarity=0.244 Sum_probs=191.9
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 75 lg~~-~~dvQl~g~~~l~~g~--iaEm~TGEGKTL~a~l~~~l~al~g~------~vhvvTvNdYLA~RDa~~m~~iy~~ 145 (799)
T PRK09200 75 LGMR-PYDVQLIGALVLHEGN--IAEMQTGEGKTLTATMPLYLNALEGK------GVHLITTNDYLAKRDFEEMGQVYEF 145 (799)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 5997-6568999899984695--24551788589999999999974699------8189800557778879999999998
Q ss_pred CCCCCCCCCCCCCCC---CCCCCCCCHHHHHHCCCCHH-HHHHHCC------CCCCCCCEEECCCCCCCCC-CCC-----
Q ss_conf 332210000122222---22222210112210221023-3332000------0001210010255100000-001-----
Q gi|254780382|r 99 YNLTVALLIGGIPFE---AQNKKLERGADVLICTPGRI-LDHFNRG------KLLMNNIEILVIDEADRML-DMG----- 162 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~---~~~~~l~~~~~IiV~TP~rl-~~~l~~~------~~~l~~~~~lViDEah~l~-~~g----- 162 (465)
T Consensus 146 lGl~vg~~~~~~~~~~~~~~~r~~~Y~~di~Y~tn~e~gfDyLrDn~~~~~~~~v~r~~~~aivDEvDsiLiDeArtPli 225 (799)
T PRK09200 146 LGLTVGLNFSDIDDYEYQAGEKKAIYEADIIYTTNSELGFDYLRDNLADSKEDKVLRPLNYAIIDEVDSILLDEAQTPLV 225 (799)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCHHHHHCCCCCCCHHHCCCCCCCEEEEECHHHHHHHCCCCCCE
T ss_conf 29658333688864437979999887477222356540034530120156765257789668985326677741356412
Q ss_pred ----------CHHHHHHHHHHHCC--------CCCCCCCCCC--------------CCCC-------CC-CCCC-C-CCC
Q ss_conf ----------00357887543102--------2222333432--------------1122-------22-1111-2-222
Q gi|254780382|r 163 ----------FIPYIQNITSLVPF--------TRQTLLFSAT--------------MTDE-------LQ-KVSE-N-FLQ 200 (465)
Q Consensus 163 ----------f~~~i~~i~~~~~~--------~~q~i~~SAT--------------~~~~-------v~-~l~~-~-~l~ 200 (465)
T Consensus 226 isg~~~~~~~~~~~~~~~~~~l~~~~dy~~d~~~~~v~lt~~G~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~~~~~~ 305 (799)
T PRK09200 226 ISGAPRVQSNLYHIAAEFVKTLEEDVDYEFDKEKKEVWLTDQGIEKAESYFGIDNLYSEEHQVLVRHIILALRAHYLFER 305 (799)
T ss_pred ECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 14898765279999999985267744378511006776244579999997099754765577899999999999999845
Q ss_pred CCCC------------------------------------CCCCCCCCCCCCC---------------------------
Q ss_conf 2100------------------------------------1344432123464---------------------------
Q gi|254780382|r 201 NPKR------------------------------------IEVNTPSSTAETI--------------------------- 217 (465)
Q Consensus 201 ~~~~------------------------------------i~v~~~~~~~~~i--------------------------- 217 (465)
T Consensus 306 d~~YiV~~~~v~ivDe~TGR~~~gr~~s~GlhQaiEaKE~v~i~~e~~t~a~it~Qn~Fr~y~kl~GmTGTa~~~~~Ef~ 385 (799)
T PRK09200 306 DVDYIVYDGEIVLIDRFTGRVLPGRKLQDGLHQAIEAKEGVEVTEENRTMASITIQNLFRMFPKLSGMTGTAKTEEKEFF 385 (799)
T ss_pred CCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHH
T ss_conf 86279866818998789887489982665779999987089878887312664489898647231257676098999999
Q ss_pred -------------------CCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------------------2111112222110244432101223456506776213443222222222233222223454
Q gi|254780382|r 218 -------------------EHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGN 278 (465)
Q Consensus 218 -------------------~~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~ 278 (465)
T Consensus 386 ~iY~l~v~~iPtn~p~~r~d~~d~v~~t~~~k~~av~~~v~~~~~~g~pvLvgt~sv~~Se~~s~~L~~~~i~h~vLnAk 465 (799)
T PRK09200 386 EVYNMEVVQIPTNRPIIRIDYPDKVFATVDEKYKAVIEEVKERHETGRPVLIGTGSIEQSEYFSKLLFEAGIPHNLLNAK 465 (799)
T ss_pred HHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCC
T ss_conf 98687769889999854454743010899999999999999998579988998385799999999998657643320532
Q ss_pred CCHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHCCC---CC-----CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEE
Q ss_conf 2033323444420135-523888846646440788---76-----50020024677899887521024588853999977
Q gi|254780382|r 279 IDQRSRMKILSNFKEG-TIQLMVASDLAARGLDIP---DV-----GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLV 349 (465)
Q Consensus 279 l~~~~R~~~~~~F~~g-~~~vLV~Td~~~~GiDip---~v-----~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~ 349 (465)
T Consensus 466 ~~~~Ea-~Iia~--AG~~g~vTiaTnMAGRGtDI~l~~~v~~~GGL~Vigterhes~Rid~QlrGR~gRQGdpG~s~f~~ 542 (799)
T PRK09200 466 NAAQEA-QIIAE--AGQKGAVTVATNMAGRGTDIKLGEGVHELGGLAVIGTERMESRRVDLQLRGRSGRQGDPGSSQFFI 542 (799)
T ss_pred CHHHHH-HHHHH--CCCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEE
T ss_conf 177899-99982--789994898454558986953384535438817740344514667767516534579998548998
Q ss_pred CHHHH
Q ss_conf 88899
Q gi|254780382|r 350 AKEDI 354 (465)
Q Consensus 350 ~~~d~ 354 (465)
T Consensus 543 sled~ 547 (799)
T PRK09200 543 SLEDD 547 (799)
T ss_pred ECCHH
T ss_conf 51478