HHsearch alignment for GI: 254780382 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=100.00 E-value=1.3e-31 Score=222.79 Aligned_cols=282 Identities=22% Similarity=0.350 Sum_probs=192.9
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 75 ~G~-~~w~~Qr~WakR~~~g~SFaiiAPTG~GKT-tfgl~~sly~a-----~kgkks~~i~PT~~Lv~Q~~~kl~~~~~~ 147 (1176)
T PRK09401 75 VGS-EPWSLQRTWAKRLLLGESFAIIAPTGVGKT-TFGLVMALYLA-----KKGKKSYIIFPTRLLVEQVVEKLRKLAEK 147 (1176)
T ss_pred HCC-CCCHHHHHHHHHHHCCCCEEEECCCCCCHH-HHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 689-984889999999866897489888998888-99999999998-----65983999968889999999999999997
Q ss_pred CC--CCCCCCCCCCCCCCCCC---CCCC-HHHHHHCCCCHHHHHHHCCCCCCC--CCEEECCCCCCCCCC----------
Q ss_conf 33--22100001222222222---2210-112210221023333200000012--100102551000000----------
Q gi|254780382|r 99 YN--LTVALLIGGIPFEAQNK---KLER-GADVLICTPGRILDHFNRGKLLMN--NIEILVIDEADRMLD---------- 160 (465)
Q Consensus 99 ~~--l~~~~~~gg~~~~~~~~---~l~~-~~~IiV~TP~rl~~~l~~~~~~l~--~~~~lViDEah~l~~---------- 160 (465)
T Consensus 148 ~~~~~~~~~y~~~~~~~~kee~~~~~~~gdfdIlitT~~fl----~kn~~~l~~~~f~fifvDDVDs~LKssKnid~~l~ 223 (1176)
T PRK09401 148 VGVKVRLLYYHSSLKKKEKEEFLERLEEGDFDILVTTSQFL----SKNFDELPKDRFDFVFVDDVDAVLKSSKNIDKLLK 223 (1176)
T ss_pred HCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHH----HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHH
T ss_conf 09984089985677666789999886559986899856767----65487603568888999341877752340999999
Q ss_pred -CCCHHH-HHHHHHHH-------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -010035-78875431-------------------------022222333432112222111122222100134443212
Q gi|254780382|r 161 -MGFIPY-IQNITSLV-------------------------PFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSST 213 (465)
Q Consensus 161 -~gf~~~-i~~i~~~~-------------------------~~~~q~i~~SAT~~~~v~~l~~~~l~~~~~i~v~~~~~~ 213 (465)
T Consensus 224 llGf~~e~i~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~livsSAT~~prg~r--~~lfreLlgFevg~~~~~ 301 (1176)
T PRK09401 224 LLGFSEEDIEKAMELIKLKRKTEELKEEIEELEEKIREIRKKKKGVLVVSSATGRPRGIR--IKLFRELLGFEVGRPRFY 301 (1176)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH--HHHHHHHHCCCCCCCCCC
T ss_conf 839999999999999997523434445677889999987436874999975777888853--899999829867886423
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCC---CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 346421111122221102444321012234565067762134---43222222222233222223454203332344442
Q gi|254780382|r 214 AETIEHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQK---KNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSN 290 (465)
Q Consensus 214 ~~~i~~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~---~~~~~l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~ 290 (465)
T Consensus 302 lRni~D~y~~~~~----~~~~~~e~v~~l--G~GgLifv~~~~g~e~~~~~~~~l~~~g~~a~~~~~~~-----~~~le~ 370 (1176)
T PRK09401 302 LRNIVDVYIEPED----LVEKLVELVKRL--GDGGLVFVPTDYGKEYAEELKEYLESHGIKAEAYSGRK-----KEFLEK 370 (1176)
T ss_pred EEEEEEEECCCCC----HHHHHHHHHHHH--CCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCC-----HHHHHH
T ss_conf 0212577605766----889999999984--89549997676588999999999997696699960588-----668889
Q ss_pred HCCCCCEEEEEH----HHHHHHHCCCC-CCEEEEECCCC
Q ss_conf 013552388884----66464407887-65002002467
Q gi|254780382|r 291 FKEGTIQLMVAS----DLAARGLDIPD-VGHVFNFDVPN 324 (465)
Q Consensus 291 F~~g~~~vLV~T----d~~~~GiDip~-v~~VI~~d~P~ 324 (465)
T Consensus 371 f~~Ge~dvLvG~asyyg~lvRGiDlP~~irYaiF~GvPk 409 (1176)
T PRK09401 371 FEEGEIDVLIGVASYYGVLVRGIDLPERIRYAIFYGVPK 409 (1176)
T ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCE
T ss_conf 757886489997012452101577641168999976963