HHsearch alignment for GI: 254780382 and conserved domain: PRK09751
>PRK09751 putative ATP-dependent helicase Lhr; Provisional.
Probab=100.00 E-value=1.4e-45 Score=312.06 Aligned_cols=332 Identities=23% Similarity=0.307 Sum_probs=227.3
Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCC-------CCCCCEEEEECCCHHHHHHHHHHHHHHC------------CCCCCCC
Q ss_conf 98279851789999999999860652-------1478279998285899999999987410------------2333221
Q gi|254780382|r 43 GIAQTGTGKTASFVLPMLTILEKGRA-------RVRMPRTLILEPTRELAAQVADNFEKYG------------KNYNLTV 103 (465)
Q Consensus 43 ~~apTGsGKT~~~~lp~l~~l~~~~~-------~~~~~~~lil~PtreLa~Qi~~~~~~~~------------~~~~l~~ 103 (465)
T Consensus 1 VvAPTGSGKTLAAFL~aLd~L~~~~~~~~~~~~~~~~~~VLYISPLKALa~Dv~rNL~~PL~gI~~~~~~~g~~~~~i~V 80 (1490)
T PRK09751 1 VIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 80 (1490)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 95988743989999999999996145555556788973899959278889999999987998889999862567899758
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCC-CCCCCCEEECCCCCCCCCCCCCH----HHHHHHHHHHCCCC
Q ss_conf 00001222222222221011221022102333320000-00121001025510000000100----35788754310222
Q gi|254780382|r 104 ALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGK-LLMNNIEILVIDEADRMLDMGFI----PYIQNITSLVPFTR 178 (465)
Q Consensus 104 ~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~-~~l~~~~~lViDEah~l~~~gf~----~~i~~i~~~~~~~~ 178 (465)
T Consensus 81 ~vRtGDT~~~eR~r~~r~PPdILITTPESL~LlLtsk~r~~L~~v~~VIVDEiHalagsKRGahLaLsLeRL~~l~~~~~ 160 (1490)
T PRK09751 81 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSA 160 (1490)
T ss_pred EEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 63799999999999850899839848899999873569999779989996286442058839999999999998658999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC------C------CC-------CCHHHHHHHH
Q ss_conf 22333432112222111122222--10013444321234642111112------2------22-------1102444321
Q gi|254780382|r 179 QTLLFSATMTDELQKVSENFLQN--PKRIEVNTPSSTAETIEHCFVAT------Y------AQ-------YSKKCALLQQ 237 (465)
Q Consensus 179 q~i~~SAT~~~~v~~l~~~~l~~--~~~i~v~~~~~~~~~i~~~~~~~------~------~~-------~~~k~~~l~~ 237 (465)
T Consensus 161 qRIGLSATv~p-~e~vA-~fLgg~rpv~I-V~~~~~k~~~l~v-~vPv~d~~~~~~~~~~~g~~~~~~~~~siw~~v~~~ 236 (1490)
T PRK09751 161 QRIGLSATVRS-ASDVA-AFLGGDRPVTV-VNPPAMRHPQIRI-VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETG 236 (1490)
T ss_pred CEEEEECCCCC-HHHHH-HHHCCCCCEEE-ECCCCCCCCEEEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 68999776689-99999-87379998378-6888888752799-704665333332356776322355545316788999
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCC------------------------------CC---CCCCCCCCCCHHHH
Q ss_conf 0122345650677621344322222222223------------------------------32---22223454203332
Q gi|254780382|r 238 LLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQ------------------------------GF---SVCAIHGNIDQRSR 284 (465)
Q Consensus 238 l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~------------------------------g~---~v~~lhg~l~~~~R 284 (465)
T Consensus 237 i~~~i~~hrsTLVF~NTR~~AErl~~~L~el~~erl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ia~aHHGSlSke~R 316 (1490)
T PRK09751 237 ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 316 (1490)
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99999726876999788799999999999999987324643221100001112222112356654334455576899999
Q ss_pred HHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCC-CCCCCEEEEEEECHH-HHHHHHH-HH
Q ss_conf 34444201355238888466464407887650020024677899887521024-588853999977888-9999999-99
Q gi|254780382|r 285 MKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTG-RAGRHGKAFTLVAKE-DIKHIDA-IE 361 (465)
Q Consensus 285 ~~~~~~F~~g~~~vLV~Td~~~~GiDip~v~~VI~~d~P~~~~~y~hR~GR~g-R~g~~G~~i~~~~~~-d~~~~~~-i~ 361 (465)
T Consensus 317 ~~vE~~LK~G~LraVVaTSSLELGIDiG~VDlVVQvgsP~sVAs~lQRvGRAGH~vg~~S~g~~~p~~r~dlle~av~~~ 396 (1490)
T PRK09751 317 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 396 (1490)
T ss_pred HHHHHHHHCCCCCEEEECCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 99999986799778997780540776446557998069667889999710125788984407996287789999999999
Q ss_pred HHHCCCCCCCCCCHHHH
Q ss_conf 99623123044636652
Q gi|254780382|r 362 KLIEKKVDWLNGDLSSL 378 (465)
Q Consensus 362 ~~~~~~~~~~~~~~~~~ 378 (465)
T Consensus 397 ~~~~G~iE~~~~p~npL 413 (1490)
T PRK09751 397 CMFAGRLENLTPPHNPL 413 (1490)
T ss_pred HHHCCCCCCCCCCCCHH
T ss_conf 99829988778898559