HHsearch alignment for GI: 254780382 and conserved domain: PRK12326

>PRK12326 preprotein translocase subunit SecA; Reviewed.
Probab=99.81  E-value=1.7e-18  Score=138.29  Aligned_cols=322  Identities=20%  Similarity=0.257  Sum_probs=188.9

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf             87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r   19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN   98 (465)
Q Consensus        19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~   98 (465)
T Consensus        86 lG~r-~ydVQliGg~~L~~G~--IaEM~TGEGKTL~atlpaylnAL~Gk------gVHvVTvNDYLA~RDaewm~piy~f  156 (775)
T PRK12326         86 LGLR-PFDVQLLGALRLLAGD--VVEMATGEGKTLAGAIAAAGYALGGR------RVHVITVNDYLARRDAEWMGPLLEA  156 (775)
T ss_pred             CCCC-CCHHHHHHHHHHHCCC--EEEEECCCCHHHHHHHHHHHHHHCCC------CCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             3898-6468999899984595--36760688589999999999963699------8089822568788769999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCC------CCCCCCCEEECCCCCCCCC-CCCCH------
Q ss_conf             33221000012222222222210112210221023-3332000------0001210010255100000-00100------
Q gi|254780382|r   99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRG------KLLMNNIEILVIDEADRML-DMGFI------  164 (465)
Q Consensus        99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~------~~~l~~~~~lViDEah~l~-~~gf~------  164 (465)
T Consensus       157 LGLtvg~i~~~~~~~e--rr~aY~~DItY~Tn~E~GFDYLRDnm~~~~~~~vqr~~~faIVDEvDSILIDEArTPLIISG  234 (775)
T PRK12326        157 FGLTVGWITEESTAEE--RRAAYACDVTYASVNEIGFDVLRDQLVTDVADLVSPNPDVAIIDEADSVLVDEALVPLVLAG  234 (775)
T ss_pred             HCCEECCCCCCCCHHH--HHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCEEEEECCCHHHHHCCCCCEEECC
T ss_conf             2977653789999799--99844687731155553244551321269888436778759986420001213577706508


Q ss_pred             --------HHHHHHHHHHCCC--------CCCCCCCCC--------------CC-CCCCC--------C-CCCCC-CCCC
Q ss_conf             --------3578875431022--------222333432--------------11-22221--------1-11222-2210
Q gi|254780382|r  165 --------PYIQNITSLVPFT--------RQTLLFSAT--------------MT-DELQK--------V-SENFL-QNPK  203 (465)
Q Consensus       165 --------~~i~~i~~~~~~~--------~q~i~~SAT--------------~~-~~v~~--------l-~~~~l-~~~~  203 (465)
T Consensus       235 ~~~~~~~~~~~~~~v~~L~~~~dy~iDe~~k~v~LTe~G~~~vE~~l~~~~ly~~~~~~~~l~~v~~AL~A~~l~~rDvd  314 (775)
T PRK12326        235 TTHRETPRGEIIRLVRELKEGKDYTTDEDRRNVHLTDKGARKVEKALGGIDLYSEEHVGTTLTEVNVALHAHVLLQRDVH  314 (775)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             98776649999999985678888798547664422513899999970887646732178999999999989998857974


Q ss_pred             CC------------------------------------CCCCCCCCCCCC------------------------------
Q ss_conf             01------------------------------------344432123464------------------------------
Q gi|254780382|r  204 RI------------------------------------EVNTPSSTAETI------------------------------  217 (465)
Q Consensus       204 ~i------------------------------------~v~~~~~~~~~i------------------------------  217 (465)
T Consensus       315 YIV~dg~V~IVDe~TGR~m~gRrwsdGLHQAiEAKEgv~i~~e~~tlAsIT~Qn~Fr~Y~kLsGMTGTA~t~~~Ef~~iY  394 (775)
T PRK12326        315 YIVRDGAVHLINASRGRIAQLQRWPDGLQAAVEAKEGLETTETGEVLDTITVQALINRYPTVCGMTGTALAAGEQLRQFY  394 (775)
T ss_pred             EEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             79987868995167787678984673067999996498768887314542799999752275377776166999999974


Q ss_pred             ----------------CCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             ----------------2111112222110244432101223456506776213443222222222233222223454203
Q gi|254780382|r  218 ----------------EHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQ  281 (465)
Q Consensus       218 ----------------~~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~l~~  281 (465)
T Consensus       395 ~L~V~~IPtn~P~~R~D~~D~vy~t~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~ls~~L~~~gi~h~VLNAk~~~  474 (775)
T PRK12326        395 KLGVSVIPPNKPNIREDEADRVYATAAEKNDAIVEHIAEVHETGQPVLVGTRDVAESEELAERLVRRGVPAVVLNAKNDA  474 (775)
T ss_pred             CCCEEEECCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCHH
T ss_conf             88659917999841045888164699999999999999999759988997071898999999998769983023689727


Q ss_pred             HHHHHHHHHHCCC-CCEEEEEHHHHHHHHCCCC----------C-----CEEEEECCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf             3323444420135-5238888466464407887----------6-----5002002467789988752102458885399
Q gi|254780382|r  282 RSRMKILSNFKEG-TIQLMVASDLAARGLDIPD----------V-----GHVFNFDVPNRAENYIHRIGRTGRAGRHGKA  345 (465)
Q Consensus       282 ~~R~~~~~~F~~g-~~~vLV~Td~~~~GiDip~----------v-----~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~  345 (465)
T Consensus       475 ~E-A~IIA~--AG~~GaVTIATNMAGRGTDIkLGg~~e~~~~~V~elGGL~VIgterheSrRIDnQLrGRaGRQGDPGsS  551 (775)
T PRK12326        475 EE-AAVIAE--AGKYGAVTVSTQMAGRGTDIRLGGSDEADHDRVVELGGLHVVGTGRHRSQRLDNQLRGRAGRQGDPGSS  551 (775)
T ss_pred             HH-HHHHHH--CCCCCCEEEECCCCCCCCCEECCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             69-999994--599998798233678986841489722324789865990785214333467786762231237999861


Q ss_pred             EEEECHHHH
Q ss_conf             997788899
Q gi|254780382|r  346 FTLVAKEDI  354 (465)
Q Consensus       346 i~~~~~~d~  354 (465)
T Consensus       552 ~FflSLEDd  560 (775)
T PRK12326        552 VFFVSWEDD  560 (775)
T ss_pred             EEEEEECHH
T ss_conf             589970338