HHsearch alignment for GI: 254780382 and conserved domain: PRK12326
>PRK12326 preprotein translocase subunit SecA; Reviewed.
Probab=99.81 E-value=1.7e-18 Score=138.29 Aligned_cols=322 Identities=20% Similarity=0.257 Sum_probs=188.9
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 86 lG~r-~ydVQliGg~~L~~G~--IaEM~TGEGKTL~atlpaylnAL~Gk------gVHvVTvNDYLA~RDaewm~piy~f 156 (775)
T PRK12326 86 LGLR-PFDVQLLGALRLLAGD--VVEMATGEGKTLAGAIAAAGYALGGR------RVHVITVNDYLARRDAEWMGPLLEA 156 (775)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEEECCCCHHHHHHHHHHHHHHCCC------CCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 3898-6468999899984595--36760688589999999999963699------8089822568788769999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCC------CCCCCCCEEECCCCCCCCC-CCCCH------
Q ss_conf 33221000012222222222210112210221023-3332000------0001210010255100000-00100------
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRG------KLLMNNIEILVIDEADRML-DMGFI------ 164 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~------~~~l~~~~~lViDEah~l~-~~gf~------ 164 (465)
T Consensus 157 LGLtvg~i~~~~~~~e--rr~aY~~DItY~Tn~E~GFDYLRDnm~~~~~~~vqr~~~faIVDEvDSILIDEArTPLIISG 234 (775)
T PRK12326 157 FGLTVGWITEESTAEE--RRAAYACDVTYASVNEIGFDVLRDQLVTDVADLVSPNPDVAIIDEADSVLVDEALVPLVLAG 234 (775)
T ss_pred HCCEECCCCCCCCHHH--HHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCEEEEECCCHHHHHCCCCCEEECC
T ss_conf 2977653789999799--99844687731155553244551321269888436778759986420001213577706508
Q ss_pred --------HHHHHHHHHHCCC--------CCCCCCCCC--------------CC-CCCCC--------C-CCCCC-CCCC
Q ss_conf --------3578875431022--------222333432--------------11-22221--------1-11222-2210
Q gi|254780382|r 165 --------PYIQNITSLVPFT--------RQTLLFSAT--------------MT-DELQK--------V-SENFL-QNPK 203 (465)
Q Consensus 165 --------~~i~~i~~~~~~~--------~q~i~~SAT--------------~~-~~v~~--------l-~~~~l-~~~~ 203 (465)
T Consensus 235 ~~~~~~~~~~~~~~v~~L~~~~dy~iDe~~k~v~LTe~G~~~vE~~l~~~~ly~~~~~~~~l~~v~~AL~A~~l~~rDvd 314 (775)
T PRK12326 235 TTHRETPRGEIIRLVRELKEGKDYTTDEDRRNVHLTDKGARKVEKALGGIDLYSEEHVGTTLTEVNVALHAHVLLQRDVH 314 (775)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98776649999999985678888798547664422513899999970887646732178999999999989998857974
Q ss_pred CC------------------------------------CCCCCCCCCCCC------------------------------
Q ss_conf 01------------------------------------344432123464------------------------------
Q gi|254780382|r 204 RI------------------------------------EVNTPSSTAETI------------------------------ 217 (465)
Q Consensus 204 ~i------------------------------------~v~~~~~~~~~i------------------------------ 217 (465)
T Consensus 315 YIV~dg~V~IVDe~TGR~m~gRrwsdGLHQAiEAKEgv~i~~e~~tlAsIT~Qn~Fr~Y~kLsGMTGTA~t~~~Ef~~iY 394 (775)
T PRK12326 315 YIVRDGAVHLINASRGRIAQLQRWPDGLQAAVEAKEGLETTETGEVLDTITVQALINRYPTVCGMTGTALAAGEQLRQFY 394 (775)
T ss_pred EEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 79987868995167787678984673067999996498768887314542799999752275377776166999999974
Q ss_pred ----------------CCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf ----------------2111112222110244432101223456506776213443222222222233222223454203
Q gi|254780382|r 218 ----------------EHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQ 281 (465)
Q Consensus 218 ----------------~~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~l~~ 281 (465)
T Consensus 395 ~L~V~~IPtn~P~~R~D~~D~vy~t~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~ls~~L~~~gi~h~VLNAk~~~ 474 (775)
T PRK12326 395 KLGVSVIPPNKPNIREDEADRVYATAAEKNDAIVEHIAEVHETGQPVLVGTRDVAESEELAERLVRRGVPAVVLNAKNDA 474 (775)
T ss_pred CCCEEEECCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCHH
T ss_conf 88659917999841045888164699999999999999999759988997071898999999998769983023689727
Q ss_pred HHHHHHHHHHCCC-CCEEEEEHHHHHHHHCCCC----------C-----CEEEEECCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 3323444420135-5238888466464407887----------6-----5002002467789988752102458885399
Q gi|254780382|r 282 RSRMKILSNFKEG-TIQLMVASDLAARGLDIPD----------V-----GHVFNFDVPNRAENYIHRIGRTGRAGRHGKA 345 (465)
Q Consensus 282 ~~R~~~~~~F~~g-~~~vLV~Td~~~~GiDip~----------v-----~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~ 345 (465)
T Consensus 475 ~E-A~IIA~--AG~~GaVTIATNMAGRGTDIkLGg~~e~~~~~V~elGGL~VIgterheSrRIDnQLrGRaGRQGDPGsS 551 (775)
T PRK12326 475 EE-AAVIAE--AGKYGAVTVSTQMAGRGTDIRLGGSDEADHDRVVELGGLHVVGTGRHRSQRLDNQLRGRAGRQGDPGSS 551 (775)
T ss_pred HH-HHHHHH--CCCCCCEEEECCCCCCCCCEECCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 69-999994--599998798233678986841489722324789865990785214333467786762231237999861
Q ss_pred EEEECHHHH
Q ss_conf 997788899
Q gi|254780382|r 346 FTLVAKEDI 354 (465)
Q Consensus 346 i~~~~~~d~ 354 (465)
T Consensus 552 ~FflSLEDd 560 (775)
T PRK12326 552 VFFVSWEDD 560 (775)
T ss_pred EEEEEECHH
T ss_conf 589970338