HHsearch alignment for GI: 254780382 and conserved domain: PRK12727
>PRK12727 flagellar biosynthesis regulator FlhF; Provisional.
Probab=96.94 E-value=0.0016 Score=41.56 Aligned_cols=31 Identities=13% Similarity=0.381 Sum_probs=15.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEH
Q ss_conf 33222223454203332344442013552388884
Q gi|254780382|r 268 QGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVAS 302 (465)
Q Consensus 268 ~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~T 302 (465)
T Consensus 404 lgvpv~~~~---~~~~l~~~l~~l~~~~l-vliDT 434 (557)
T PRK12727 404 LGIAVHEAD---SAESLLDLLERLRDYKL-VLIDT 434 (557)
T ss_pred HCCEEEEEC---CHHHHHHHHHHHCCCCE-EEEEC
T ss_conf 397579828---99999999998369998-99949