HHsearch alignment for GI: 254780382 and conserved domain: PRK12898
>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.83 E-value=2.4e-19 Score=143.65 Aligned_cols=322 Identities=22% Similarity=0.268 Sum_probs=189.2
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 115 lg~r-~ydvQliGg~~Lh~G~--IaEM~TGEGKTL~atlpaylnAL~G~------gVHvvTvNDYLA~RDae~mg~iy~f 185 (673)
T PRK12898 115 LGMR-HFPVQLMGGLALLEGW--LAEMQTGEGKTLTATLPAGTAALAGR------PVHVITVNDYLAERDAEQMRPLYEA 185 (673)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEEECCCCHHHHHHHHHHHHHHCCC------CEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 3898-6468999899984584--35750788589999999999973699------7089804557778769999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCC-------------------------CCCCCCCEEECC
Q ss_conf 33221000012222222222210112210221023-3332000-------------------------000121001025
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRG-------------------------KLLMNNIEILVI 152 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~-------------------------~~~l~~~~~lVi 152 (465)
T Consensus 186 LGLsvg~i~~~~~~~e--Rr~aY~~DItYgTn~E~GFDYLRDnm~~~~~~~~~~~~~~~l~~~~~~~~~~vqR~l~fAIV 263 (673)
T PRK12898 186 LGVTVGCVIEDQDPEE--RRAAYGADVTYCTNKELVFDYLRDRIALGQRAGDARLALESLRGGSERSGQLLLRGLHFAIV 263 (673)
T ss_pred HCCEEEEECCCCCHHH--HHHHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCEEEE
T ss_conf 2977845179999799--99972699579565233245776413023343211111011013346677751356753787
Q ss_pred CCCCCCC-CCC--------------CHH---HHHHHHHHHCCC--------CCCCCCCCC---------------CCCC-
Q ss_conf 5100000-001--------------003---578875431022--------222333432---------------1122-
Q gi|254780382|r 153 DEADRML-DMG--------------FIP---YIQNITSLVPFT--------RQTLLFSAT---------------MTDE- 190 (465)
Q Consensus 153 DEah~l~-~~g--------------f~~---~i~~i~~~~~~~--------~q~i~~SAT---------------~~~~- 190 (465)
T Consensus 264 DEvDSILIDEARTPLIISgp~~~~~~~~~y~~a~~~~~~L~~~~dY~iDek~k~v~LTe~G~~~ie~~l~~~~~~~~~~~ 343 (673)
T PRK12898 264 DEADSVLIDEARTPLIISAPAKEEDGAAVLRRALALAAELQEGEDYRIDAATKQIELTEAGRARIAALAESLPPAWRGAV 343 (673)
T ss_pred ECHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 33033121024676101477777640899999999998567888779866888265786799999997241565565311
Q ss_pred -----CCC-CCC-C-CCCCCCCC------------------------------------CCCCCCCCCCCC---------
Q ss_conf -----221-111-2-22221001------------------------------------344432123464---------
Q gi|254780382|r 191 -----LQK-VSE-N-FLQNPKRI------------------------------------EVNTPSSTAETI--------- 217 (465)
Q Consensus 191 -----v~~-l~~-~-~l~~~~~i------------------------------------~v~~~~~~~~~i--------- 217 (465)
T Consensus 344 ~~~~~i~~ALrA~~lf~rDvdYIV~dgeVvIVDEfTGR~m~GRrwsdGLHQAIEAKEgV~I~~e~qTlAsIT~QnfFR~Y 423 (673)
T PRK12898 344 RREELVRQALSALHLFRRDEHYIVRDGKVVIVDEFTGRVMPDRSWSDGLHQAIEAKEGVELTDPRETLARITFQRFFRRY 423 (673)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 48999999999999985798389978928998788885068880663789999985399878312356643499999856
Q ss_pred -------------------------------------CCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf -------------------------------------2111112222110244432101223456506776213443222
Q gi|254780382|r 218 -------------------------------------EHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVN 260 (465)
Q Consensus 218 -------------------------------------~~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~ 260 (465)
T Consensus 424 ~kLsGMTGTA~tea~Ef~~iY~L~Vv~IPTnrP~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~SE~ 503 (673)
T PRK12898 424 LRLAGMTGTAREVAGELWSVYGLPVVRIPTNRPSQRIVLPTEVFLTLAAKWAAVAARVRELHASGRPVLVGTRSVAASER 503 (673)
T ss_pred CHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 17405777857579999997599769868999730123798585699999999999999998679988998375899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHCCCC---C-----CEEEEECCCCCHHHHHH
Q ss_conf 2222222332222234542033323444420135-5238888466464407887---6-----50020024677899887
Q gi|254780382|r 261 LCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEG-TIQLMVASDLAARGLDIPD---V-----GHVFNFDVPNRAENYIH 331 (465)
Q Consensus 261 l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g-~~~vLV~Td~~~~GiDip~---v-----~~VI~~d~P~~~~~y~h 331 (465)
T Consensus 504 lS~~L~~~gi~h~VLNAk~~~~E-A~IIA~--AG~~GaVTIATNMAGRGTDI~Lg~~V~~~GGLhVIgTerheSrRIDnQ 580 (673)
T PRK12898 504 LSALLREAGLPHQVLNAKQDAEE-AAIVAR--AGQRGRITVATNMAGRGTDIKLEPEVAARGGLHVILTERHESARIDRQ 580 (673)
T ss_pred HHHHHHHCCCCHHHCCCCCHHHH-HHHHHH--CCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 99999986997566478666879-999994--399998797023678986847676788628988984375511245656
Q ss_pred HHHCCCCCCCCEEEEEEECHHHH
Q ss_conf 52102458885399997788899
Q gi|254780382|r 332 RIGRTGRAGRHGKAFTLVAKEDI 354 (465)
Q Consensus 332 R~GR~gR~g~~G~~i~~~~~~d~ 354 (465)
T Consensus 581 LrGRsGRQGDPGss~f~lSleDd 603 (673)
T PRK12898 581 LAGRCGRQGDPGSSEAILSLEDD 603 (673)
T ss_pred HHCCCCCCCCCCCEEEEEEECHH
T ss_conf 42354468999851489981467