HHsearch alignment for GI: 254780382 and conserved domain: PRK12902

>PRK12902 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.80  E-value=1.5e-18  Score=138.50  Aligned_cols=281  Identities=17%  Similarity=0.233  Sum_probs=162.5

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf             87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r   19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN   98 (465)
Q Consensus        19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~   98 (465)
T Consensus        82 lg~r-~ydvQliGg~~Lh~G~--iaEM~TGEGKTL~atlp~ylnAL~Gk------gvHvvTvNdYLA~RDae~m~~vy~f  152 (946)
T PRK12902         82 LGMR-HFDVQLIGGMVLHEGQ--IAEMKTGEGKTLVATLPSYLNALTGK------GVHVVTVNDYLARRDAEWMGQVHRF  152 (946)
T ss_pred             CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf             4897-5579999899984684--13541788479999999999865599------7099726526568679999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CCCC-------
Q ss_conf             33221000012222222222210112210221023-33320000------001210010255100000-0010-------
Q gi|254780382|r   99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DMGF-------  163 (465)
Q Consensus        99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~gf-------  163 (465)
T Consensus       153 LGltvg~i~~~~~~~e--r~~aY~~DItY~Tn~E~gFDYLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPLIISg  230 (946)
T PRK12902        153 LGLSVGLIQQDMSPEE--RKKNYACDITYATNSELGFDYLRDNMATDISEVVQRPFNYCVIDEVDSILIDEARTPLIISG  230 (946)
T ss_pred             HCCEEEEECCCCCHHH--HHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHHCCCCCEEECC
T ss_conf             1977835489989899--99985898279788875772353044788688438799658985425665432467646417


Q ss_pred             --------HHHHHHHHHHHC-------------------CCCCCCCCCCC--------------CCCC------CCC-C-
Q ss_conf             --------035788754310-------------------22222333432--------------1122------221-1-
Q gi|254780382|r  164 --------IPYIQNITSLVP-------------------FTRQTLLFSAT--------------MTDE------LQK-V-  194 (465)
Q Consensus       164 --------~~~i~~i~~~~~-------------------~~~q~i~~SAT--------------~~~~------v~~-l-  194 (465)
T Consensus       231 ~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~~dy~idek~~~v~lTe~G~~~~e~~l~~~~ly~~~~~~~~~i~~aL~  310 (946)
T PRK12902        231 QVERPQEKYQKAAEVAAALQRAAELGKDGIDPEGDYEVDEKQRNVLLTDEGFAKAEQLLGVSDLFDPKDPWAHYIFNALK  310 (946)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf             88765488999999999999865410134688888798757673310414699999873302236864559999999999


Q ss_pred             CCC-CCCCCCC------------------------------------CCCCCCCCCCCCCC-CCCCC-------------
Q ss_conf             112-2222100------------------------------------13444321234642-11111-------------
Q gi|254780382|r  195 SEN-FLQNPKR------------------------------------IEVNTPSSTAETIE-HCFVA-------------  223 (465)
Q Consensus       195 ~~~-~l~~~~~------------------------------------i~v~~~~~~~~~i~-~~~~~-------------  223 (465)
T Consensus       311 A~~lf~~d~dYiV~dg~v~IvDefTGR~m~gRr~s~GLHQAiEAKE~v~i~~e~~t~AsIT~Qn~Fr~Y~kLsGMTGTA~  390 (946)
T PRK12902        311 AKELFIKDVNYIVRNGEAVIVDEFTGRVMPGRRWSDGLHQAIEAKEGVEIQPETQTLASITYQNFFLLYPKLAGMTGTAK  390 (946)
T ss_pred             HHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCHHHCCCCCCCH
T ss_conf             99988469818998998999868888777788142468999998728987888810022118789864616326856758


Q ss_pred             --------------------------------CCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             --------------------------------222211024443210122345650677621344322222222223322
Q gi|254780382|r  224 --------------------------------TYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFS  271 (465)
Q Consensus       224 --------------------------------~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~  271 (465)
T Consensus       391 te~~Ef~~iY~l~Vv~IPTn~p~~R~D~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLVGT~SVe~SE~ls~lL~~~gi~  470 (946)
T PRK12902        391 TEEVEFEKTYKLEVTVIPTNRPRRRQDWPDQVYKTEIAKWRAVANETAEMHKQGRPVLVGTTSVEKSELLSALLAEQGIP  470 (946)
T ss_pred             HHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC
T ss_conf             79999999868866985899984246270020179999999999999999758998899727579899999999855886


Q ss_pred             CCCCCCCCCHHHHHH-HHHHHCCCCCEEEEEHHHHHHHHCC
Q ss_conf             222345420333234-4442013552388884664644078
Q gi|254780382|r  272 VCAIHGNIDQRSRMK-ILSNFKEGTIQLMVASDLAARGLDI  311 (465)
Q Consensus       272 v~~lhg~l~~~~R~~-~~~~F~~g~~~vLV~Td~~~~GiDi  311 (465)
T Consensus       471 h~VLNAk~~n~~~EAeIIA~-AG~~gaVTIATNMAGRGTDI  510 (946)
T PRK12902        471 HNLLNAKPENVEREAEIVAQ-AGRKGAVTIATNMAGRGTDI  510 (946)
T ss_pred             CCEEECCCCCCHHHHHHHHH-CCCCCCEEEECCCCCCCCCE
T ss_conf             20325786442789999994-69999689745446898695