HHsearch alignment for GI: 254780382 and conserved domain: PRK12902
>PRK12902 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.80 E-value=1.5e-18 Score=138.50 Aligned_cols=281 Identities=17% Similarity=0.233 Sum_probs=162.5
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 82 lg~r-~ydvQliGg~~Lh~G~--iaEM~TGEGKTL~atlp~ylnAL~Gk------gvHvvTvNdYLA~RDae~m~~vy~f 152 (946)
T PRK12902 82 LGMR-HFDVQLIGGMVLHEGQ--IAEMKTGEGKTLVATLPSYLNALTGK------GVHVVTVNDYLARRDAEWMGQVHRF 152 (946)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 4897-5579999899984684--13541788479999999999865599------7099726526568679999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CCCC-------
Q ss_conf 33221000012222222222210112210221023-33320000------001210010255100000-0010-------
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DMGF------- 163 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~gf------- 163 (465)
T Consensus 153 LGltvg~i~~~~~~~e--r~~aY~~DItY~Tn~E~gFDYLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPLIISg 230 (946)
T PRK12902 153 LGLSVGLIQQDMSPEE--RKKNYACDITYATNSELGFDYLRDNMATDISEVVQRPFNYCVIDEVDSILIDEARTPLIISG 230 (946)
T ss_pred HCCEEEEECCCCCHHH--HHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHHCCCCCEEECC
T ss_conf 1977835489989899--99985898279788875772353044788688438799658985425665432467646417
Q ss_pred --------HHHHHHHHHHHC-------------------CCCCCCCCCCC--------------CCCC------CCC-C-
Q ss_conf --------035788754310-------------------22222333432--------------1122------221-1-
Q gi|254780382|r 164 --------IPYIQNITSLVP-------------------FTRQTLLFSAT--------------MTDE------LQK-V- 194 (465)
Q Consensus 164 --------~~~i~~i~~~~~-------------------~~~q~i~~SAT--------------~~~~------v~~-l- 194 (465)
T Consensus 231 ~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~~dy~idek~~~v~lTe~G~~~~e~~l~~~~ly~~~~~~~~~i~~aL~ 310 (946)
T PRK12902 231 QVERPQEKYQKAAEVAAALQRAAELGKDGIDPEGDYEVDEKQRNVLLTDEGFAKAEQLLGVSDLFDPKDPWAHYIFNALK 310 (946)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 88765488999999999999865410134688888798757673310414699999873302236864559999999999
Q ss_pred CCC-CCCCCCC------------------------------------CCCCCCCCCCCCCC-CCCCC-------------
Q ss_conf 112-2222100------------------------------------13444321234642-11111-------------
Q gi|254780382|r 195 SEN-FLQNPKR------------------------------------IEVNTPSSTAETIE-HCFVA------------- 223 (465)
Q Consensus 195 ~~~-~l~~~~~------------------------------------i~v~~~~~~~~~i~-~~~~~------------- 223 (465)
T Consensus 311 A~~lf~~d~dYiV~dg~v~IvDefTGR~m~gRr~s~GLHQAiEAKE~v~i~~e~~t~AsIT~Qn~Fr~Y~kLsGMTGTA~ 390 (946)
T PRK12902 311 AKELFIKDVNYIVRNGEAVIVDEFTGRVMPGRRWSDGLHQAIEAKEGVEIQPETQTLASITYQNFFLLYPKLAGMTGTAK 390 (946)
T ss_pred HHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCHHHCCCCCCCH
T ss_conf 99988469818998998999868888777788142468999998728987888810022118789864616326856758
Q ss_pred --------------------------------CCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf --------------------------------222211024443210122345650677621344322222222223322
Q gi|254780382|r 224 --------------------------------TYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFS 271 (465)
Q Consensus 224 --------------------------------~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~ 271 (465)
T Consensus 391 te~~Ef~~iY~l~Vv~IPTn~p~~R~D~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLVGT~SVe~SE~ls~lL~~~gi~ 470 (946)
T PRK12902 391 TEEVEFEKTYKLEVTVIPTNRPRRRQDWPDQVYKTEIAKWRAVANETAEMHKQGRPVLVGTTSVEKSELLSALLAEQGIP 470 (946)
T ss_pred HHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC
T ss_conf 79999999868866985899984246270020179999999999999999758998899727579899999999855886
Q ss_pred CCCCCCCCCHHHHHH-HHHHHCCCCCEEEEEHHHHHHHHCC
Q ss_conf 222345420333234-4442013552388884664644078
Q gi|254780382|r 272 VCAIHGNIDQRSRMK-ILSNFKEGTIQLMVASDLAARGLDI 311 (465)
Q Consensus 272 v~~lhg~l~~~~R~~-~~~~F~~g~~~vLV~Td~~~~GiDi 311 (465)
T Consensus 471 h~VLNAk~~n~~~EAeIIA~-AG~~gaVTIATNMAGRGTDI 510 (946)
T PRK12902 471 HNLLNAKPENVEREAEIVAQ-AGRKGAVTIATNMAGRGTDI 510 (946)
T ss_pred CCEEECCCCCCHHHHHHHHH-CCCCCCEEEECCCCCCCCCE
T ss_conf 20325786442789999994-69999689745446898695