HHsearch alignment for GI: 254780382 and conserved domain: PRK12903
>PRK12903 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.83 E-value=2e-19 Score=144.27 Aligned_cols=323 Identities=17% Similarity=0.205 Sum_probs=188.1
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 75 lg~r-~ydvQl~gg~~l~~G~--iaEM~TGEGKTL~atlp~ylnal~g~------gvhvvTvNdYLA~RDae~m~~~y~~ 145 (885)
T PRK12903 75 LGKR-PYDVQIIGGIILDLGS--VAEMKTGEGKTITSIAPVYLNALEGK------GVIVSTVNEYLAERDAEEMGKVFKF 145 (885)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 1898-6378999899984595--14650688579999999999874699------8089806456558559999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CCCC-------
Q ss_conf 33221000012222222222210112210221023-33320000------001210010255100000-0010-------
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DMGF------- 163 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~gf------- 163 (465)
T Consensus 146 lGltvg~~~~~~~~~~--r~~aY~~ditY~tn~e~gFDyLrDnm~~~~~~~vqr~~~~aIvDEvDSiLIDeArtPLiisg 223 (885)
T PRK12903 146 LGLSVGINKANMDPNL--KREAYNCDITYSTHSELGFDYLRDNMVSSYEEKVQRGLNFCLIDEVDSILIDEARTPLIISG 223 (885)
T ss_pred HCCEEEECCCCCCHHH--HHHHHCCCCEEECCCCEEECCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCCCCEEEC
T ss_conf 2965601189999799--99985699679778650301140011358377258899803665411443304677525767
Q ss_pred --------HHHHHHHHHHHCC-------CCCCCCCCCC--------------CC---------------------CCC--
Q ss_conf --------0357887543102-------2222333432--------------11---------------------222--
Q gi|254780382|r 164 --------IPYIQNITSLVPF-------TRQTLLFSAT--------------MT---------------------DEL-- 191 (465)
Q Consensus 164 --------~~~i~~i~~~~~~-------~~q~i~~SAT--------------~~---------------------~~v-- 191 (465)
T Consensus 224 ~~~~~~~~y~~~~~~~~~l~~~dy~id~~~~~v~lte~G~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~~l~~~d~dY 303 (885)
T PRK12903 224 GKSNESNLYKAADQFVRTLEEDDYKIDEESKAIYLTEKGIKKANKFFKLDNLYAIENSELFHRIQNALRAHKVFKEGVEY 303 (885)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 89886469999999865336566886314477642511589999842664446611579999999999999998569707
Q ss_pred ----------CCCCCCCC---------CCC----CCCCCCCCCCCCCC--------------------------------
Q ss_conf ----------21111222---------221----00134443212346--------------------------------
Q gi|254780382|r 192 ----------QKVSENFL---------QNP----KRIEVNTPSSTAET-------------------------------- 216 (465)
Q Consensus 192 ----------~~l~~~~l---------~~~----~~i~v~~~~~~~~~-------------------------------- 216 (465)
T Consensus 304 iV~d~~v~ivDe~TGR~m~grr~s~GLhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~ 383 (885)
T PRK12903 304 IVRDGKIELVDQFTGRIMEGRSYSEGLQQAIQAKEMVEIEPETKTLATITYQNFFRLFKKLSGMTGTAKTEEQEFIDIYN 383 (885)
T ss_pred EEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHHHHHC
T ss_conf 99779289987898862788803036899999872887798873136630998986460422676777889999999869
Q ss_pred --------------CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf --------------421111122221102444321012234565067762134432222222222332222234542033
Q gi|254780382|r 217 --------------IEHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQR 282 (465)
Q Consensus 217 --------------i~~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~l~~~ 282 (465)
T Consensus 384 l~v~~iPtn~p~~R~d~~d~vy~t~~~k~~av~~ei~~~~~~gqPvLvgt~sve~Se~ls~~L~~~~i~h~vLNAk~~~~ 463 (885)
T PRK12903 384 MRVNVVPTNKPVIRKDEPDSIFGTKHAKWKAVVKEVKRVHEKGQPILIGTAQVEDSEQLHEYLLEANIPHTVLNAKQHAR 463 (885)
T ss_pred CEEEECCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCHHH
T ss_conf 73698189998521428323107899999999999999985799889956847999999999985687703554686588
Q ss_pred HHHHHHHHHCCCCCEEEEEHHHHHHHHCCCC---C-----CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHHH
Q ss_conf 3234444201355238888466464407887---6-----5002002467789988752102458885399997788899
Q gi|254780382|r 283 SRMKILSNFKEGTIQLMVASDLAARGLDIPD---V-----GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354 (465)
Q Consensus 283 ~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~---v-----~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d~ 354 (465)
T Consensus 464 E-A~Iia~-AG~~g~VTiATNMAGRGTDI~Lg~~v~~~GGL~VigterhesrRiD~QLrGR~gRQGDpG~s~f~~SleD~ 541 (885)
T PRK12903 464 E-AEIIAK-AGQKGAITIATNMAGRGTDIKLSKGVLELGGLYVLGTEKAESRRIDNQLRGRSGRQGDVGESRFFISLDDQ 541 (885)
T ss_pred H-HHHHHH-CCCCCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCHH
T ss_conf 9-999995-48999189837667899685741658972985898426562045888860743468999735999972648