HHsearch alignment for GI: 254780382 and conserved domain: PRK12906
>PRK12906 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.83 E-value=1.9e-19 Score=144.37 Aligned_cols=323 Identities=18% Similarity=0.210 Sum_probs=188.8
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 77 lg~r-~ydvQl~Gg~~L~~G~--iaEM~TGEGKTL~atlp~ylnaL~Gk------gvhvvTvNdYLA~RDae~m~~vy~~ 147 (823)
T PRK12906 77 LGLY-PFDVQIIGGIALHFGN--IAEMRTGEGKTLTATLPVYLNALEGK------GVHVVTVNEYLAKRDATEMGELYRW 147 (823)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 3897-6478999899983695--25650688589999999999864699------8089805446558679999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCC------CCCCCCCEEECCCCCCCCC-CCC--------
Q ss_conf 33221000012222222222210112210221023-3332000------0001210010255100000-001--------
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRG------KLLMNNIEILVIDEADRML-DMG-------- 162 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~------~~~l~~~~~lViDEah~l~-~~g-------- 162 (465)
T Consensus 148 lGltvg~i~~~~~~~e--rr~aY~~DItY~Tn~e~gFDYLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPLIISg 225 (823)
T PRK12906 148 LGLTVGLNLNDMSPDE--KREAYNCDITYSTNSELGFDYLRDNMVVYKEQMVQRPLNYAIVDEVDSILIDEARTPLIISG 225 (823)
T ss_pred CCCEEEEECCCCCHHH--HHHHHCCCCEEECCCCEECCCCCCCCCCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEEEC
T ss_conf 0966712089999899--99985078446256550211135441268888347888558985414654323567626625
Q ss_pred -------CHHHHHHHHHHHCC-------------------CCCCCCCCCC---------------CCCCC--CCCC----
Q ss_conf -------00357887543102-------------------2222333432---------------11222--2111----
Q gi|254780382|r 163 -------FIPYIQNITSLVPF-------------------TRQTLLFSAT---------------MTDEL--QKVS---- 195 (465)
Q Consensus 163 -------f~~~i~~i~~~~~~-------------------~~q~i~~SAT---------------~~~~v--~~l~---- 195 (465)
T Consensus 226 ~~~~~~~~y~~~~~~v~~l~~~~~~~~~~~~~~~dy~id~~~~~v~lt~~G~~~~e~~~~~~~ly~~~~~~~~~~i~~aL 305 (823)
T PRK12906 226 PAEGASDLYIRADRFVKTLTKDEDDDADDDEDHGDYKIDEPSKTVSLTEEGIEKAEKLLGLDNLYDPENQALVHHIDQAL 305 (823)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 77555358999999999998634311233477777587425466775177999988604888778831105999999999
Q ss_pred --CC-CCCCCCC------------------------------------CCCCCCCCCCCCCC------------------
Q ss_conf --12-2222100------------------------------------13444321234642------------------
Q gi|254780382|r 196 --EN-FLQNPKR------------------------------------IEVNTPSSTAETIE------------------ 218 (465)
Q Consensus 196 --~~-~l~~~~~------------------------------------i~v~~~~~~~~~i~------------------ 218 (465)
T Consensus 306 ~A~~lf~~d~dYiV~d~~V~ivDe~TGR~m~gRr~s~GLHQAiEaKE~v~i~~e~~tlA~IT~QnfFr~Y~kLsGMTGTA 385 (823)
T PRK12906 306 RANYLMLKDKDYIVQNGEVLIVDEFTGRVMEGRRYSDGLHQAIEAKEGVEIQNENQTLATITYQNYFRLYKKLSGMTGTA 385 (823)
T ss_pred HHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCHHHCCCCCCC
T ss_conf 99999857985899889189987888886899926646799999872887788873036766999986462531676776
Q ss_pred ----------------------------CCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf ----------------------------1111122221102444321012234565067762134432222222222332
Q gi|254780382|r 219 ----------------------------HCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGF 270 (465)
Q Consensus 219 ----------------------------~~~~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~ 270 (465)
T Consensus 386 ~te~~Ef~~iY~l~Vv~IPTn~P~~R~d~~d~iy~t~~~K~~Ai~~ei~~~~~~gqPvLvGT~SVe~SE~ls~~L~~~gi 465 (823)
T PRK12906 386 KTEEEEFREIYNMDVITIPTNRPVIRVDLPDLLYPTLDSKFNAVVDDIKERHAKGQPVLVGTVSIESSERLSQLLDKAGI 465 (823)
T ss_pred HHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 87899999986886187179998511507434647999999999999999986799889971758999999999997687
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCC--------------------------------C----
Q ss_conf 2222345420333234444201355238888466464407887--------------------------------6----
Q gi|254780382|r 271 SVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPD--------------------------------V---- 314 (465)
Q Consensus 271 ~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~--------------------------------v---- 314 (465)
T Consensus 466 ~h~vLNAk~~~~EA-~IIa~-AG~~GaVTIATNMAGRGTDI~LGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~G 543 (823)
T PRK12906 466 PHAVLNAKNHAKEA-EIIAQ-AGQRGAVTIATNMAGRGTDIKLGGNPFEDIEAYQEAWIRELPKMKQRCEERRDKVRELG 543 (823)
T ss_pred CHHHHCCCCHHHHH-HHHHH-CCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 03530687757899-99983-48999389706556898796308973021343322246678888887765568999738
Q ss_pred -CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHHH
Q ss_conf -5002002467789988752102458885399997788899
Q gi|254780382|r 315 -GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354 (465)
Q Consensus 315 -~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d~ 354 (465)
T Consensus 544 GL~VIgTErheSrRIDnQLrGRaGRQGDPGss~F~lSLEDd 584 (823)
T PRK12906 544 GLAVIGTERHESRRIDNQLRGRSGRQGDPGSTRFYLSLEDD 584 (823)
T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCHH
T ss_conf 93798504440256787872321347999852376533469