HHsearch alignment for GI: 254780382 and conserved domain: PRK13103

>PRK13103 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.80  E-value=7.4e-18  Score=134.10  Aligned_cols=322  Identities=18%  Similarity=0.232  Sum_probs=184.8

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf             87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r   19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN   98 (465)
Q Consensus        19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~   98 (465)
T Consensus        79 lg~r-~~dvQl~gg~~lh~g~--iaEM~TGEGKTL~atlp~ylnal~g~------gvhvvTvNdYLA~RDae~m~~~y~~  149 (913)
T PRK13103         79 MGMR-HFDVQLIGGMTLHEGK--IAEMRTGEGKTLVGTLAVYLNALSGK------GVHVVTVNDYLARRDANWMRPLYEF  149 (913)
T ss_pred             CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf             4897-6468999899984685--14651788559999999999875599------7099726536558669999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CC--------C
Q ss_conf             33221000012222222222210112210221023-33320000------001210010255100000-00--------1
Q gi|254780382|r   99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DM--------G  162 (465)
Q Consensus        99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~--------g  162 (465)
T Consensus       150 lGltvg~i~~~~~~~~--r~~aY~~DitY~tn~e~gFDyLRDnm~~~~~~~vqr~~~~aivDEvDSiLIDEArtPLiIsg  227 (913)
T PRK13103        150 LGLSVGIVTPFQPPEE--KRAAYAADITYGTNNEFGFDYLRDNMAFSLDDKFQRELNFAVIDEVDSILIDEARTPLIISG  227 (913)
T ss_pred             HCCEEEECCCCCCHHH--HHHHCCCCCEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEEEC
T ss_conf             1976855189999799--99746688644357643353457331048788436677647874235555312568536506


Q ss_pred             -------CHHHHHHHHHHHC-------------------CCCCCCCCCCC--------C------C--CCC---CC----
Q ss_conf             -------0035788754310-------------------22222333432--------1------1--222---21----
Q gi|254780382|r  163 -------FIPYIQNITSLVP-------------------FTRQTLLFSAT--------M------T--DEL---QK----  193 (465)
Q Consensus       163 -------f~~~i~~i~~~~~-------------------~~~q~i~~SAT--------~------~--~~v---~~----  193 (465)
T Consensus       228 ~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~~~y~~de~~~~v~lt~~G~~~~e~~l~~~~~~~~~~~l~~~~~~~~~  307 (913)
T PRK13103        228 QAEDSSKLYIEINRLIPRLTQHIEEVEGQVTQEGHFTIDEKTRQVELNEAGHQFIEEMLTQAGLLAEGESLYSAHNLGLL  307 (913)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC
T ss_conf             87642578999999999998766543202366786687146565875544799999998767655553100341102422


Q ss_pred             ------CC-CC-CCCCCCCC------------------------------------CCCCCCCCCCCCC-CCCCC-----
Q ss_conf             ------11-12-22221001------------------------------------3444321234642-11111-----
Q gi|254780382|r  194 ------VS-EN-FLQNPKRI------------------------------------EVNTPSSTAETIE-HCFVA-----  223 (465)
Q Consensus       194 ------l~-~~-~l~~~~~i------------------------------------~v~~~~~~~~~i~-~~~~~-----  223 (465)
T Consensus       308 ~~v~~aL~A~~l~~~d~~YiV~d~~v~ivDe~TGR~m~grr~s~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kl  387 (913)
T PRK13103        308 THVYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQNYFRLYNKL  387 (913)
T ss_pred             CCHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHH
T ss_conf             24778899999986698689988908998688887688981653689999987489778887302330199887345042


Q ss_pred             ----------------------------------------CCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf             ----------------------------------------2222110244432101223456506776213443222222
Q gi|254780382|r  224 ----------------------------------------TYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCH  263 (465)
Q Consensus       224 ----------------------------------------~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~  263 (465)
T Consensus       388 sGMTGTa~te~~Ef~~iY~l~Vv~IPtn~p~~R~d~~d~iy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~Sve~SE~ls~  467 (913)
T PRK13103        388 SGMTGTADTEAFEFRQIYGLDVMVIPPNKPLARKDFNDLVYLTAEEKYAAIITDIKECMALGRPVLVGTATIETSEHMSN  467 (913)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf             16756738689999998688669827999861011998698389999999999999999749988996274688999999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCC---CC--------------------------
Q ss_conf             2222332222234542033323444420135523888846646440788---76--------------------------
Q gi|254780382|r  264 SLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIP---DV--------------------------  314 (465)
Q Consensus       264 ~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip---~v--------------------------  314 (465)
T Consensus       468 ~L~~~gi~h~VLNAk~~~~E-A~Iia~-AG~~gaVTIATNMAGRGTDI~LGgn~e~~~~~~~~~~~e~~~~~~~~~~~~~  545 (913)
T PRK13103        468 LLKKEGIEHKVLNAKYHEKE-AEIIAQ-AGAPGALTIATNMAGRGTDILLGGNWEVEVAALENPTPEQIAQIKADWQKRH  545 (913)
T ss_pred             HHHHCCCCCEEECCCCHHHH-HHHHHH-CCCCCCEEEECCCCCCCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             99976997512048873799-999983-3789978971645689869526886034443103676778999999999887


Q ss_pred             --------CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHH
Q ss_conf             --------500200246778998875210245888539999778889
Q gi|254780382|r  315 --------GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKED  353 (465)
Q Consensus       315 --------~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d  353 (465)
T Consensus       546 ~~V~~~GGL~VIgterheSrRiDnQLrGRsGRQGDPG~s~F~lSleD  592 (913)
T PRK13103        546 QQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDPGSSRFYLSLED  592 (913)
T ss_pred             HHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECH
T ss_conf             78986298499961655212578786074356899986548997046