HHsearch alignment for GI: 254780382 and conserved domain: PRK13103
>PRK13103 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.80 E-value=7.4e-18 Score=134.10 Aligned_cols=322 Identities=18% Similarity=0.232 Sum_probs=184.8
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 79 lg~r-~~dvQl~gg~~lh~g~--iaEM~TGEGKTL~atlp~ylnal~g~------gvhvvTvNdYLA~RDae~m~~~y~~ 149 (913)
T PRK13103 79 MGMR-HFDVQLIGGMTLHEGK--IAEMRTGEGKTLVGTLAVYLNALSGK------GVHVVTVNDYLARRDANWMRPLYEF 149 (913)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 4897-6468999899984685--14651788559999999999875599------7099726536558669999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CC--------C
Q ss_conf 33221000012222222222210112210221023-33320000------001210010255100000-00--------1
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DM--------G 162 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~--------g 162 (465)
T Consensus 150 lGltvg~i~~~~~~~~--r~~aY~~DitY~tn~e~gFDyLRDnm~~~~~~~vqr~~~~aivDEvDSiLIDEArtPLiIsg 227 (913)
T PRK13103 150 LGLSVGIVTPFQPPEE--KRAAYAADITYGTNNEFGFDYLRDNMAFSLDDKFQRELNFAVIDEVDSILIDEARTPLIISG 227 (913)
T ss_pred HCCEEEECCCCCCHHH--HHHHCCCCCEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEEEC
T ss_conf 1976855189999799--99746688644357643353457331048788436677647874235555312568536506
Q ss_pred -------CHHHHHHHHHHHC-------------------CCCCCCCCCCC--------C------C--CCC---CC----
Q ss_conf -------0035788754310-------------------22222333432--------1------1--222---21----
Q gi|254780382|r 163 -------FIPYIQNITSLVP-------------------FTRQTLLFSAT--------M------T--DEL---QK---- 193 (465)
Q Consensus 163 -------f~~~i~~i~~~~~-------------------~~~q~i~~SAT--------~------~--~~v---~~---- 193 (465)
T Consensus 228 ~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~~~y~~de~~~~v~lt~~G~~~~e~~l~~~~~~~~~~~l~~~~~~~~~ 307 (913)
T PRK13103 228 QAEDSSKLYIEINRLIPRLTQHIEEVEGQVTQEGHFTIDEKTRQVELNEAGHQFIEEMLTQAGLLAEGESLYSAHNLGLL 307 (913)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC
T ss_conf 87642578999999999998766543202366786687146565875544799999998767655553100341102422
Q ss_pred ------CC-CC-CCCCCCCC------------------------------------CCCCCCCCCCCCC-CCCCC-----
Q ss_conf ------11-12-22221001------------------------------------3444321234642-11111-----
Q gi|254780382|r 194 ------VS-EN-FLQNPKRI------------------------------------EVNTPSSTAETIE-HCFVA----- 223 (465)
Q Consensus 194 ------l~-~~-~l~~~~~i------------------------------------~v~~~~~~~~~i~-~~~~~----- 223 (465)
T Consensus 308 ~~v~~aL~A~~l~~~d~~YiV~d~~v~ivDe~TGR~m~grr~s~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kl 387 (913)
T PRK13103 308 THVYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQNYFRLYNKL 387 (913)
T ss_pred CCHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHH
T ss_conf 24778899999986698689988908998688887688981653689999987489778887302330199887345042
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf ----------------------------------------2222110244432101223456506776213443222222
Q gi|254780382|r 224 ----------------------------------------TYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCH 263 (465)
Q Consensus 224 ----------------------------------------~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~ 263 (465)
T Consensus 388 sGMTGTa~te~~Ef~~iY~l~Vv~IPtn~p~~R~d~~d~iy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~Sve~SE~ls~ 467 (913)
T PRK13103 388 SGMTGTADTEAFEFRQIYGLDVMVIPPNKPLARKDFNDLVYLTAEEKYAAIITDIKECMALGRPVLVGTATIETSEHMSN 467 (913)
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf 16756738689999998688669827999861011998698389999999999999999749988996274688999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCC---CC--------------------------
Q ss_conf 2222332222234542033323444420135523888846646440788---76--------------------------
Q gi|254780382|r 264 SLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIP---DV-------------------------- 314 (465)
Q Consensus 264 ~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip---~v-------------------------- 314 (465)
T Consensus 468 ~L~~~gi~h~VLNAk~~~~E-A~Iia~-AG~~gaVTIATNMAGRGTDI~LGgn~e~~~~~~~~~~~e~~~~~~~~~~~~~ 545 (913)
T PRK13103 468 LLKKEGIEHKVLNAKYHEKE-AEIIAQ-AGAPGALTIATNMAGRGTDILLGGNWEVEVAALENPTPEQIAQIKADWQKRH 545 (913)
T ss_pred HHHHCCCCCEEECCCCHHHH-HHHHHH-CCCCCCEEEECCCCCCCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 99976997512048873799-999983-3789978971645689869526886034443103676778999999999887
Q ss_pred --------CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHH
Q ss_conf --------500200246778998875210245888539999778889
Q gi|254780382|r 315 --------GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKED 353 (465)
Q Consensus 315 --------~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d 353 (465)
T Consensus 546 ~~V~~~GGL~VIgterheSrRiDnQLrGRsGRQGDPG~s~F~lSleD 592 (913)
T PRK13103 546 QQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDPGSSRFYLSLED 592 (913)
T ss_pred HHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECH
T ss_conf 78986298499961655212578786074356899986548997046