HHsearch alignment for GI: 254780382 and conserved domain: PRK13826

>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=95.52  E-value=0.19  Score=28.27  Aligned_cols=114  Identities=19%  Similarity=0.186  Sum_probs=62.8

Q ss_pred             CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCE-EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHH
Q ss_conf             698889999999787987898999999999769979-9982798517899999999998606521478279998285899
Q gi|254780382|r    6 LGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDV-CGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTREL   84 (465)
Q Consensus         6 l~l~~~l~~~l~~~~~~~pt~iQ~~~i~~~l~g~dv-i~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreL   84 (465)
T Consensus       365 h~V~~~~~~~a~~~-~~~Ls~EQ~~Av~hiT~~~~Ia~VvG~AGaGKSt--mL~aARea----wEa~GyrV~GaALsGk-  436 (1102)
T PRK13826        365 HGVREAVLAATFAR-HARLSDEQKTAIEHVAGAERIAAVIGRAGAGKTT--MMKAAREA----WEAAGYRVVGGALAGK-  436 (1102)
T ss_pred             CCCCHHHHHHHHHH-HCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHH--HHHHHHHH----HHHCCCEEEEECCCHH-
T ss_conf             78767899999850-2138999999999853788668998428887889--99999999----9977977980150078-


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCC
Q ss_conf             9999999874102333221000012222222222210112210221023333200000012100102551000
Q gi|254780382|r   85 AAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADR  157 (465)
Q Consensus        85 a~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~  157 (465)
T Consensus       437 ------AAegLe~~sGI~SrTl------------------------As~e~~w~~gr~~L~~~dVlVIDEAGM  479 (1102)
T PRK13826        437 ------AAEGLEKEAGIASRTL------------------------SSWELRWNQGRDQLDNKTVFVLDEAGM  479 (1102)
T ss_pred             ------HHHHHHHCCCCCCHHH------------------------HHHHHHHCCCCCCCCCCCEEEEECCCC
T ss_conf             ------9997753469530338------------------------999987435865567873899845556