HHsearch alignment for GI: 254780382 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=100.00 E-value=0 Score=718.67 Aligned_cols=376 Identities=35% Similarity=0.600 Sum_probs=344.6
Q ss_pred CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC--CCCCCEEEEE
Q ss_conf 98436698889999999787987898999999999769979998279851789999999999860652--1478279998
Q gi|254780382|r 1 MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRA--RVRMPRTLIL 78 (465)
Q Consensus 1 ~~f~~l~l~~~l~~~l~~~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~--~~~~~~~lil 78 (465)
T Consensus 182 ~~F~~~~fp~~il~~i~~~GF~~PTPIQ~qaIPiaLsGrDvIgiAqTGSGKTLAFlLP~l~hi~~q~~~~~~~gP~aLIL 261 (602)
T PTZ00110 182 VSFEYTSFPDYILKSIEAAGFTEPTPIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQPLLRPGDGPIVLVL 261 (602)
T ss_pred CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf 66501599999999999769999998999998798569867998789788999999999999851634367899769997
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCC
Q ss_conf 28589999999998741023332210000122222222222101122102210233332000000121001025510000
Q gi|254780382|r 79 EPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRM 158 (465)
Q Consensus 79 ~PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l 158 (465)
T Consensus 262 aPTRELA~QI~~e~~~~~~~~~ir~~~i~GG~~~~~Q~~~L~~G~dIvVATPGRLiDlL~~~~~~L~~v~yLVLDEADRM 341 (602)
T PTZ00110 262 APTRELAEQIREQALQFGRSSKLKNSVAYGGVPKRFQTYALRRGVEILIACPGRLIDFLESNVTNLRRVTYLVLDEADRM 341 (602)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEEECHHHH
T ss_conf 38399999999999997154785499997996879999987169999997923899999649987431028998757766
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 000100357887543102222233343211222211112222-21001344432-1234642111112222110244432
Q gi|254780382|r 159 LDMGFIPYIQNITSLVPFTRQTLLFSATMTDELQKVSENFLQ-NPKRIEVNTPS-STAETIEHCFVATYAQYSKKCALLQ 236 (465)
Q Consensus 159 ~~~gf~~~i~~i~~~~~~~~q~i~~SAT~~~~v~~l~~~~l~-~~~~i~v~~~~-~~~~~i~~~~~~~~~~~~~k~~~l~ 236 (465)
T Consensus 342 LDmGFe~qI~~Il~~i~pdRQTlLFSAT~p~~V~~LA~~~L~~~Pv~I~Vg~~~~~a~~~I~Q~v~vv~-~-~eK~~~L~ 419 (602)
T PTZ00110 342 LDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQSLARDLCKEEPVHVNVGSLDLTTCHNIKQEVFVIE-E-HEKRAKLK 419 (602)
T ss_pred HCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEC-H-HHHHHHHH
T ss_conf 354629999999985897877999955899899999999820698899936888777787058999965-1-88999999
Q ss_pred HCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCE
Q ss_conf 10122345650677621344322222222223322222345420333234444201355238888466464407887650
Q gi|254780382|r 237 QLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGH 316 (465)
Q Consensus 237 ~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~v~~ 316 (465)
T Consensus 420 ~lL~~~~~~~kvIIFvnTK~~ad~L~~~L~~~G~~a~~LHGd~~Q~eR~~~L~~Fr~G~~~ILVATDVAARGLDI~dV~~ 499 (602)
T PTZ00110 420 ELLGQIMDGGKILIFSETKKGADTLTKELRLDGWPALCIHGDKKQEERTWVLNEFKTGKHPIMIATDVASRGLDVRDVKY 499 (602)
T ss_pred HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCE
T ss_conf 99985278996899929738999999999867995798208899999999999997699988988222331555157987
Q ss_pred EEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 02002467789988752102458885399997788899999999999623123044636652
Q gi|254780382|r 317 VFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEKLIEKKVDWLNGDLSSL 378 (465)
Q Consensus 317 VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~ 378 (465)
T Consensus 500 VINYD~P~~~edYVHRIGRTGRAG~kG~A~TF~Tpd~~~~a~~Lv~~L~ea~q~vp~~L~~l 561 (602)
T PTZ00110 500 VINFDFPNQIEDYVHRIGRTGRAGAKGASYTFLTPDKYRSARELVKLMREAKQEIPPELEKL 561 (602)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99958979802210135615068993169999777707789999999998389999899998