HHsearch alignment for GI: 254780382 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=97.56 E-value=0.00037 Score=45.74 Aligned_cols=57 Identities=30% Similarity=0.367 Sum_probs=42.0
Q ss_pred CCHHHHHHH-HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC-CCCCCCCCEEEEECCCHHH
Q ss_conf 898999999-999769979998279851789999999999860-6521478279998285899
Q gi|254780382|r 24 PTPIQIKTI-PLVLQRHDVCGIAQTGTGKTASFVLPMLTILEK-GRARVRMPRTLILEPTREL 84 (465)
Q Consensus 24 pt~iQ~~~i-~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~-~~~~~~~~~~lil~PtreL 84 (465)
T Consensus 124 mtaaQ~d~l~~Av~ar~NIlv~GGTGSGKTTL-aNAlla~I~~l~~---P~dR~vIiEDT~El 182 (315)
T TIGR02782 124 MTAAQRDVLREAVAARKNILVVGGTGSGKTTL-ANALLAEIAKLND---PDDRVVIIEDTAEL 182 (315)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECCCCCCHHHH-HHHHHHHHHHCCC---CCCEEEEEECCHHH
T ss_conf 55789999999997129889981458857999-9999998852169---99618998547132