HHsearch alignment for GI: 254780382 and conserved domain: TIGR02788

>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=96.11  E-value=0.0064  Score=37.73  Aligned_cols=60  Identities=27%  Similarity=0.346  Sum_probs=34.0

Q ss_pred             HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99769979998279851789999999999860652147827999828589999999998741023332210000122
Q gi|254780382|r   34 LVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGI  110 (465)
Q Consensus        34 ~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~  110 (465)
T Consensus       154 Ai~~~knIii~GGTgSGKTT-f~kal~~~IP~~E------R~iTIED~~E~~~----------~hhpN~V~L~ysk~  213 (328)
T TIGR02788       154 AIASRKNIIISGGTGSGKTT-FLKALVKEIPKDE------RLITIEDTRELFL----------PHHPNKVHLFYSKG  213 (328)
T ss_pred             HHHCCCEEEEEECCCCHHHH-HHHHHHHCCCCCC------CEEEEEEEECCCC----------CCCCCEEEEEECCC
T ss_conf             98738919999068971899-9999973276225------2788852011478----------88986456553464