HHsearch alignment for GI: 254780382 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=91.45 E-value=0.69 Score=24.60 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=17.7
Q ss_pred CCCEEEEEECCCCCCCCCCCCCC--CCCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf 56506776213443222222222--233222223-454203332344442
Q gi|254780382|r 244 TMKNGIIFCNQKKNVVNLCHSLE--KQGFSVCAI-HGNIDQRSRMKILSN 290 (465)
Q Consensus 244 ~~~k~iIF~~t~~~~~~l~~~L~--~~g~~v~~l-hg~l~~~~R~~~~~~ 290 (465)
T Consensus 222 ~g~~Vl~fS-LEMs~eql~~R~la~~s~i~~~~i~~g~l~~~~~~~~~~a 270 (421)
T TIGR03600 222 EGKPVLFFS-LEMSAEQLGERLLASKSGINTGNIRTGRFNDSDFNRLLNA 270 (421)
T ss_pred CCCEEEEEE-CCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHH
T ss_conf 698389992-5799999999999985489776665289998999999999