HHsearch alignment for GI: 254780382 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=91.68 E-value=0.89 Score=23.89 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=25.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 9998279851789999999999860652147827999828589999999998741
Q gi|254780382|r 41 VCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKY 95 (465)
Q Consensus 41 vi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~ 95 (465)
T Consensus 2 ~li~g~~g~GKttl~~~-~~~~~~~-----~~~~~~~~~-~ee~~~q~~~~~~~~ 49 (165)
T cd01120 2 ILVFGPTGSGKTTLALQ-LALNIAT-----KGGKVVYVD-IEEEIEELTERLIGE 49 (165)
T ss_pred EEEECCCCCCHHHHHHH-HHHHHHH-----CCCEEEEEE-CCCCHHHHHHHHHHH
T ss_conf 89998999989999999-9999876-----399799998-666448999999986