HHsearch alignment for GI: 254780382 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=91.85 E-value=0.16 Score=28.79 Aligned_cols=17 Identities=35% Similarity=0.483 Sum_probs=15.0
Q ss_pred CCCCEEEECCCCCCHHH
Q ss_conf 69979998279851789
Q gi|254780382|r 37 QRHDVCGIAQTGTGKTA 53 (465)
Q Consensus 37 ~g~dvi~~apTGsGKT~ 53 (465)
T Consensus 28 ~Ge~vaivG~sGsGKST 44 (229)
T cd03254 28 PGETVAIVGPTGAGKTT 44 (229)
T ss_pred CCCEEEEECCCCCHHHH
T ss_conf 99999999999980999