HHsearch alignment for GI: 254780382 and conserved domain: pfam00271
>pfam00271 Helicase_C Helicase conserved C-terminal domain. The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.
Probab=99.75 E-value=9.9e-19 Score=139.73 Aligned_cols=78 Identities=46% Similarity=0.883 Sum_probs=75.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 222223322222345420333234444201355238888466464407887650020024677899887521024588
Q gi|254780382|r 263 HSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAG 340 (465)
Q Consensus 263 ~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~v~~VI~~d~P~~~~~y~hR~GR~gR~g 340 (465)
T Consensus 1 ~~l~~~g~~~~~i~g~~~~~~R~~~~~~f~~~~~~ilv~t~~~~~Gid~~~~~~vi~~~~~~s~~~~~Q~~GR~~R~g 78 (78)
T pfam00271 1 KLLRKPGIKVARLHGGLSQEEREEILEDFRNGKSKVLVATDVAGRGIDLPDVNVVINYDLPWNPASYIQRIGRAGRAG 78 (78)
T ss_pred CCHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCC
T ss_conf 945568985999869799999999999998799739999256525677878999999789969899999972687799