HHsearch alignment for GI: 254780382 and conserved domain: pfam06862
>pfam06862 DUF1253 Protein of unknown function (DUF1253). This family represents the C-terminal portion (approximately 500 residues) of several hypothetical eukaryotic proteins of unknown function.
Probab=99.57 E-value=4.9e-14 Score=109.45 Aligned_cols=288 Identities=22% Similarity=0.304 Sum_probs=180.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCCCC-C----CCCCCCCCCCCC----------------------C--------C
Q ss_conf 782799982858999999999874102333-2----210000122222----------------------2--------2
Q gi|254780382|r 71 RMPRTLILEPTRELAAQVADNFEKYGKNYN-L----TVALLIGGIPFE----------------------A--------Q 115 (465)
Q Consensus 71 ~~~~~lil~PtreLa~Qi~~~~~~~~~~~~-l----~~~~~~gg~~~~----------------------~--------~ 115 (465)
T Consensus 34 tRPKVLIL~P~R~~A~~~V~~l~~l~~~~~~v~nk~RF~~ef~~~~~~~~~~~~~~kP~D~~~~F~GN~DD~FrlGik~t 113 (435)
T pfam06862 34 TRPKVLILLPTRNIALEVVDTLIKLLPASDQVENKKRFNDEFGEDDDEEPPTLKTKKPEDFQALFKGNNDDMFRLGIKFT 113 (435)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEC
T ss_conf 88869998587899999999999875836667889999876188511157544679958899972899767388877870
Q ss_pred CCCCC-----CHHHHHHCCCCHHHHHHHCC------CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHC---------
Q ss_conf 22221-----01122102210233332000------00012100102551000000010035788754310---------
Q gi|254780382|r 116 NKKLE-----RGADVLICTPGRILDHFNRG------KLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVP--------- 175 (465)
Q Consensus 116 ~~~l~-----~~~~IiV~TP~rl~~~l~~~------~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~--------- 175 (465)
T Consensus 114 rksikLys~Fy~SDIIiASPLGLr~~i~~~~~k~rd~DFLSSIEvlIiDqad~l~MQN-W~Hv~~v~~~lN~~Pk~~h~~ 192 (435)
T pfam06862 114 RKSIKLYSPFYSSDIIIASPLGLRMIIENEDEKKRDYDFLSSIEVLIVDQADVILMQN-WEHVLTVFKHLNKIPKKSHGA 192 (435)
T ss_pred CCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH-HHHHHHHHHHHCCCCCCCCCC
T ss_conf 6705984565658979988188899863677644456400004678743266898741-999999999844487756799
Q ss_pred ---------------CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC------CCCCCCCCCCCCCCCCCCCC-----
Q ss_conf ---------------2222233343211222211112222210-01344------43212346421111122221-----
Q gi|254780382|r 176 ---------------FTRQTLLFSATMTDELQKVSENFLQNPK-RIEVN------TPSSTAETIEHCFVATYAQY----- 228 (465)
Q Consensus 176 ---------------~~~q~i~~SAT~~~~v~~l~~~~l~~~~-~i~v~------~~~~~~~~i~~~~~~~~~~~----- 228 (465)
T Consensus 193 DfsRVR~w~L~g~ak~~RQTii~s~~~~p~~nsl~~~~~~N~~Gkvr~~~~~~~g~i~~v~~~v~Q~F~R~~~~s~~~~~ 272 (435)
T pfam06862 193 DFSRVRMWYLDGQAKYYRQTIIFSSYITPEINSLFNSKCVNYRGKVKLKPIYKSGVIGQVGLKVRQIFQRFDASSIVDDP 272 (435)
T ss_pred CEEHEEHHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEECCCCCCCCH
T ss_conf 82000075726723553466886336888899999974735565588734777755102567864269985689845474
Q ss_pred CHHH-----HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf 1024-----44321012234565067762134432222222222332222234542033323444420135523888846
Q gi|254780382|r 229 SKKC-----ALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASD 303 (465)
Q Consensus 229 ~~k~-----~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td 303 (465)
T Consensus 273 d~Rf~~F~~~vlp~l~~~-~~~~~~LI~iPSYfDfVRvRn~l~~~~~sF~~i~EYt~~~~israR~~F~~g~~~iLLyTE 351 (435)
T pfam06862 273 DARFKFFTSNVLPQLRKS-SYDSGTLIFIPSYFDFVRIRNYLKKENVSFAAISEYTSQKKISRARTLFFSGRIKVLLYTE 351 (435)
T ss_pred HHHHHHHHHHHHHHHHHC-CCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEH
T ss_conf 689999999760576635-7889789995645899999999987088377675638877899999998759941899960
Q ss_pred HHH--HHHCCCCCCEEEEECCCCCHHHHHHHH---HCC---CCCCCCEEEEEEECHHHHHHHHHH
Q ss_conf 646--440788765002002467789988752---102---458885399997788899999999
Q gi|254780382|r 304 LAA--RGLDIPDVGHVFNFDVPNRAENYIHRI---GRT---GRAGRHGKAFTLVAKEDIKHIDAI 360 (465)
Q Consensus 304 ~~~--~GiDip~v~~VI~~d~P~~~~~y~hR~---GR~---gR~g~~G~~i~~~~~~d~~~~~~i 360 (465)
T Consensus 352 R~hffrRy~ikGi~~vIFY~~P~~p~FY~El~~~l~~s~~~~~~~~~~~v~~lyskyD~l~LErI 416 (435)
T pfam06862 352 RLHFFRRYKIKGVKNVIFYGPPENPQFYSELVRMLGKSVNNGEALAAASVRALYSKYDALALERI 416 (435)
T ss_pred HHHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHH
T ss_conf 24441120027874799978999833899998655125445445677679999871548789887