HHsearch alignment for GI: 254780382 and conserved domain: pfam12340
>pfam12340 DUF3638 Protein of unknown function (DUF3638). This domain family is found in eukaryotes, and is approximately 230 amino acids in length. There are two conserved sequence motifs: LLE and NMG.
Probab=97.66 E-value=0.0002 Score=47.46 Aligned_cols=152 Identities=18% Similarity=0.318 Sum_probs=83.6
Q ss_pred CHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC---CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
Q ss_conf 843669888999999978798789899999999976---99799982798517899999999998606521478279998
Q gi|254780382|r 2 DFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQ---RHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLIL 78 (465)
Q Consensus 2 ~f~~l~l~~~l~~~l~~~~~~~pt~iQ~~~i~~~l~---g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil 78 (465)
T Consensus 4 nW~p~~~P~~Ll~E~-e~~il-iR~~Q~~va~~~i~~~~~~n~v~QlnMGeGKTsV-I~Pmla~~LAdg~~----Lvr~v 76 (229)
T pfam12340 4 NWDPLDYPDWLLLEI-ESNIL-IRPVQVDVARAMISPSSGSNSVLQLNMGEGKTSV-IVPMVAAVLADGSR----LVRVI 76 (229)
T ss_pred CCCCHHCHHHHHHHH-HCCCE-ECHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCEE-EHHHHHHHHCCCCC----EEEEE
T ss_conf 888111638989999-84965-4289999999985755788722011206996224-37889999748884----58998
Q ss_pred CCCHHHHHHHHHHHHH-HCCCCCCCCCC--CCCCCCCCCC----CCC----CCCHHHHHHCCCCHHHHHHHC-------C
Q ss_conf 2858999999999874-10233322100--0012222222----222----210112210221023333200-------0
Q gi|254780382|r 79 EPTRELAAQVADNFEK-YGKNYNLTVAL--LIGGIPFEAQ----NKK----LERGADVLICTPGRILDHFNR-------G 140 (465)
Q Consensus 79 ~PtreLa~Qi~~~~~~-~~~~~~l~~~~--~~gg~~~~~~----~~~----l~~~~~IiV~TP~rl~~~l~~-------~ 140 (465)
T Consensus 77 vp-~~Ll~q~~~~L~~~lggll~r~v~~lPFsR~~~~~~~~~~~~~~~~~~~~~~~GIll~~PEhilSf~L~~le~l~~~ 155 (229)
T pfam12340 77 VP-KPLLRQMAQMLQSRLGGLLGREIYHLPFSRRTPTTESEINLYRQLHEECMKEGGVLLAQPEHILSFKLSGLQRLIDG 155 (229)
T ss_pred CC-HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 26-88999999999998642137705984034768899899999999999999729879968078776898868998738
Q ss_pred CC-----------CCCCCEEECCCCCCCCCCC
Q ss_conf 00-----------0121001025510000000
Q gi|254780382|r 141 KL-----------LMNNIEILVIDEADRMLDM 161 (465)
Q Consensus 141 ~~-----------~l~~~~~lViDEah~l~~~ 161 (465)
T Consensus 156 ~~~~a~~m~~~~~~l~~~~rDIlDEsD~~L~~ 187 (229)
T pfam12340 156 KLSEARSMIKTQQWLDEHSRDILDESDENLAV 187 (229)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
T ss_conf 87899999999999984487104451034565