HHsearch alignment for GI: 254780382 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=99.94 E-value=2.9e-26 Score=188.34 Aligned_cols=185 Identities=39% Similarity=0.605 Sum_probs=147.8
Q ss_pred HCCCCCCCHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
Q ss_conf 787987898999999999769-9799982798517899999999998606521478279998285899999999987410
Q gi|254780382|r 18 DAGYVKPTPIQIKTIPLVLQR-HDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYG 96 (465)
Q Consensus 18 ~~~~~~pt~iQ~~~i~~~l~g-~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~ 96 (465)
T Consensus 3 ~~~~~~~~~~Q~~~~~~~~~~~~~~~i~~~tGsGKT~~~~~~~~~~~~~~~----~~~~li~~P~~~l~~q~~~~~~~~~ 78 (201)
T smart00487 3 KFGFEPLRPYQKEAIEALLSGLRDVILAAPTGSGKTLAALLPALEALKRGK----GKRVLVLVPTRELAEQWAEELKKLG 78 (201)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC----CCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 137999998899999999838998899899996099999999999863389----9759999085999999998860102
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 233322100001222222222221011-2210221023333200000012100102551000000010035788754310
Q gi|254780382|r 97 KNYNLTVALLIGGIPFEAQNKKLERGA-DVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVP 175 (465)
Q Consensus 97 ~~~~l~~~~~~gg~~~~~~~~~l~~~~-~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~ 175 (465)
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~t~~~l~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~ 158 (201)
T smart00487 79 PSLGLKVVGLYGGDSKREQLRKLESGKTDILVTTPGRLLDLLENDLLELSNVDLVILDEAHRLLDGGFGDQLEKLLKLLP 158 (201)
T ss_pred CCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHCC
T ss_conf 10204455652477379999999759998999558999999972754525431999989677512570999999999679
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2222233343211222211112222210013
Q gi|254780382|r 176 FTRQTLLFSATMTDELQKVSENFLQNPKRIE 206 (465)
Q Consensus 176 ~~~q~i~~SAT~~~~v~~l~~~~l~~~~~i~ 206 (465)
T Consensus 159 ~~~~~i~lSAT~~~~~~~~~~~~~~~~~~~~ 189 (201)
T smart00487 159 KNVQLLLLSATPPEEIENLLELFLNDPVFID 189 (201)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 9997899924898689999999789978998