BLAST/PSIBLAST alignment of GI: 254780382 and GI: 116252340 at iteration 1
>gi|116252340|ref|YP_768178.1| cold-shock DeaD-box protein A (ATP-dependent RNA helicase) [Rhizobium leguminosarum bv. viciae 3841] Length = 521
>gi|115256988|emb|CAK08082.1| putative cold-shock DeaD-box protein A (ATP-dependent RNA helicase) [Rhizobium leguminosarum bv. viciae 3841] Length = 521
 Score =  568 bits (1463), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 274/440 (62%), Positives = 337/440 (76%), Gaps = 1/440 (0%)

Query: 3   FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
           FADLGLS KV+ AV DAGY  PTPIQ   IP  L+R D+CGIAQTGTGKTASFVLPML++
Sbjct: 10  FADLGLSQKVLSAVTDAGYTIPTPIQAGAIPFALERRDICGIAQTGTGKTASFVLPMLSL 69

Query: 63  LEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERG 122
           LEKGRAR RMPRTLILEPTRELAAQVA+NFEKYGKN+ L VALLIGG+ FE Q++KLERG
Sbjct: 70  LEKGRARARMPRTLILEPTRELAAQVAENFEKYGKNHRLNVALLIGGVSFEDQDRKLERG 129

Query: 123 ADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLL 182
           ADVLICTPGR+LDHF RGKLLM+ +EILVIDEADRMLDMGFIP I+ I  ++PFTRQTL 
Sbjct: 130 ADVLICTPGRLLDHFERGKLLMSGVEILVIDEADRMLDMGFIPDIERIAKMIPFTRQTLF 189

Query: 183 FSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLLQSQ 242
           FSATM  E+QK+++ FLQNP+RIEV  P+S A T+   FVA++ +  +K A+L++L+++Q
Sbjct: 190 FSATMPSEIQKLADRFLQNPERIEVAKPASAAATVTQRFVASHGKDYEKRAVLRELVRAQ 249

Query: 243 DTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVAS 302
             +KN IIFCN+KK+V +L  SLE+ GFSV A+HG++DQRSR   L +F++G +QL+VAS
Sbjct: 250 TELKNAIIFCNRKKDVADLFRSLERHGFSVGALHGDMDQRSRTMTLQSFRDGNLQLLVAS 309

Query: 303 DLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEK 362
           D+AARGLDIPDV HVFNFDVP  +E+Y+HRIGRTGRAGR G AFTLV K D K +DAIEK
Sbjct: 310 DVAARGLDIPDVSHVFNFDVPIHSEDYVHRIGRTGRAGRSGAAFTLVTKRDTKFVDAIEK 369

Query: 363 LIEKKVDWLNGDLSSLNPPLEKIDIAQHNHARKNNPIPQKSTGFDRR-KKNYSSQKSHIP 421
           LI +KV+WL+GDL+SL PP E    ++           +   G DR  ++N    +    
Sbjct: 370 LIGQKVEWLSGDLTSLPPPAEDSRDSERPRRNSRERGARDGAGRDRAPRENGDKDRGRGR 429

Query: 422 LKESEKISKLQQDIQENDAD 441
              +    K   DIQ+N  D
Sbjct: 430 GNRAAASHKSDIDIQDNGVD 449