RPSBLAST alignment for GI: 254780382 and conserved domain: TIGR01054

>gnl|CDD|162177 TIGR01054, rgy, reverse gyrase. Generally, these gyrases are encoded as a single polypeptide. An exception was found in Methanopyrus kandleri, where enzyme is split within the topoisomerase domain, yielding a heterodimer of gene products designated RgyB and RgyA. Length = 1171

 Score = 55.2 bits (133), Expect = 3e-08
 Identities = 68/318 (21%), Positives = 116/318 (36%), Gaps = 65/318 (20%)

Query: 44  IAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTV 103
           IA TG GKT +F L M   L K   R       I+ PT  L  QVA+      +   +  
Sbjct: 99  IAPTGVGKT-TFGLAMSLFLAKKGKRC-----YIILPTTLLVIQVAEKISSLAEKAGVGT 152

Query: 104 ALLI---GGIPFEAQNKKLER----GADVLICTPGRILDHFNRGKLLMNNIEILVIDEAD 156
             +      +P + + + +ER      D+LI T   +  +++    L    + + +D+ D
Sbjct: 153 VNIGAYHSRLPTKEKKEFMERIENGDFDILITTTMFLSKNYDE---LGPKFDFIFVDDVD 209

Query: 157 RMLDMGFIPYIQNITSLVPFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAET 216
            +L       +  +  L+ F+ + +   A     L+      L   KR+E+       + 
Sbjct: 210 ALLKAS--KNVDKLLKLLGFSEELIE-KAWKLIRLRLKLYRALHAKKRLELLEAIPGKK- 265

Query: 217 IEHCFV---ATYAQYSKKCALLQQLL-----QSQDTMKN--------------------- 247
              C +   AT     K+  L ++LL        DT++N                     
Sbjct: 266 -RGCLIVSSATGRPRGKRAKLFRELLGFEVGGGSDTLRNVVDVYVEDEDLKETLLEIVKK 324

Query: 248 ----GIIFCNQ---KKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMV 300
               GI++ +    K+    +   LE  G    A H    +         F EG I +++
Sbjct: 325 LGTGGIVYVSIDYGKEKAEEIAEFLENHGVKAVAYHATKPKE----DYEKFAEGEIDVLI 380

Query: 301 --AS--DLAARGLDIPDV 314
             AS      RGLD+P+ 
Sbjct: 381 GVASYYGTLVRGLDLPER 398