RPSBLAST alignment for GI: 254780382 and conserved domain: PRK01297

>gnl|CDD|179276 PRK01297, PRK01297, ATP-dependent RNA helicase RhlB; Provisional. Length = 475
 Score =  283 bits (726), Expect = 6e-77
 Identities = 144/375 (38%), Positives = 224/375 (59%), Gaps = 12/375 (3%)

Query: 3   FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
           F D  L+P+++ A+ D G+   TPIQ + +   L  HD  G AQTGTGKTA+F++ ++  
Sbjct: 89  FHDFNLAPELMHAIHDLGFPYCTPIQAQVLGYTLAGHDAIGRAQTGTGKTAAFLISIINQ 148

Query: 63  L-----EKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNK 117
           L      K R     PR LI+ PTREL  Q+A +     K   L V   +GG+ F+ Q K
Sbjct: 149 LLQTPPPKERYMGE-PRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLK 207

Query: 118 KLE-RGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPF 176
           +LE R  D+L+ TPGR+LD   RG++ ++ +E++V+DEADRMLDMGFIP ++ I    P 
Sbjct: 208 QLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPR 267

Query: 177 T--RQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCAL 234
              RQTLLFSAT TD++  +++ +  +P  +E+   +  ++T+E    A     S K  L
Sbjct: 268 KEERQTLLFSATFTDDVMNLAKQWTTDPAIVEIEPENVASDTVEQHVYAVAG--SDKYKL 325

Query: 235 LQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEG 294
           L  L+ +Q+  +  ++F N+K  V  +   L K G +   + G++ Q  R+K L  F+EG
Sbjct: 326 LYNLV-TQNPWERVMVFANRKDEVRRIEERLVKDGINAAQLSGDVPQHKRIKTLEGFREG 384

Query: 295 TIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354
            I+++VA+D+A RG+ I  + HV NF +P   ++Y+HRIGRTGRAG  G + +   ++D 
Sbjct: 385 KIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGVSISFAGEDDA 444

Query: 355 KHIDAIEKLIEKKVD 369
             +  IE+L+ +K+ 
Sbjct: 445 FQLPEIEELLGRKIS 459