RPSBLAST alignment for GI: 254780382 and conserved domain: PRK01297
>gnl|CDD|179276 PRK01297, PRK01297, ATP-dependent RNA helicase RhlB; Provisional. Length = 475
Score = 283 bits (726), Expect = 6e-77
Identities = 144/375 (38%), Positives = 224/375 (59%), Gaps = 12/375 (3%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
F D L+P+++ A+ D G+ TPIQ + + L HD G AQTGTGKTA+F++ ++
Sbjct: 89 FHDFNLAPELMHAIHDLGFPYCTPIQAQVLGYTLAGHDAIGRAQTGTGKTAAFLISIINQ 148
Query: 63 L-----EKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNK 117
L K R PR LI+ PTREL Q+A + K L V +GG+ F+ Q K
Sbjct: 149 LLQTPPPKERYMGE-PRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLK 207
Query: 118 KLE-RGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPF 176
+LE R D+L+ TPGR+LD RG++ ++ +E++V+DEADRMLDMGFIP ++ I P
Sbjct: 208 QLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPR 267
Query: 177 T--RQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCAL 234
RQTLLFSAT TD++ +++ + +P +E+ + ++T+E A S K L
Sbjct: 268 KEERQTLLFSATFTDDVMNLAKQWTTDPAIVEIEPENVASDTVEQHVYAVAG--SDKYKL 325
Query: 235 LQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEG 294
L L+ +Q+ + ++F N+K V + L K G + + G++ Q R+K L F+EG
Sbjct: 326 LYNLV-TQNPWERVMVFANRKDEVRRIEERLVKDGINAAQLSGDVPQHKRIKTLEGFREG 384
Query: 295 TIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354
I+++VA+D+A RG+ I + HV NF +P ++Y+HRIGRTGRAG G + + ++D
Sbjct: 385 KIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGVSISFAGEDDA 444
Query: 355 KHIDAIEKLIEKKVD 369
+ IE+L+ +K+
Sbjct: 445 FQLPEIEELLGRKIS 459