RPSBLAST alignment for GI: 254780382 and conserved domain: PRK11776

>gnl|CDD|183308 PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional. Length = 460
 Score =  344 bits (884), Expect = 4e-95
 Identities = 155/385 (40%), Positives = 227/385 (58%), Gaps = 18/385 (4%)

Query: 1   MDFADLGLSPKVVCAVLDA-GYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPM 59
             F+ L L P ++ A L+  GY + TPIQ +++P +L   DV   A+TG+GKTA+F L +
Sbjct: 4   TAFSTLPLPPALL-ANLNELGYTEMTPIQAQSLPAILAGKDVIAQAKTGSGKTAAFGLGL 62

Query: 60  LTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN-YNLTVALLIGGIPFEAQNKK 118
           L  L+  R RV+    L+L PTRELA QVA    +  +   N+ V  L GG+P   Q   
Sbjct: 63  LQKLDVKRFRVQ---ALVLCPTRELADQVAKEIRRLARFIPNIKVLTLCGGVPMGPQIDS 119

Query: 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178
           LE GA +++ TPGRILDH  +G L ++ +  LV+DEADRMLDMGF   I  I    P  R
Sbjct: 120 LEHGAHIIVGTPGRILDHLRKGTLDLDALNTLVLDEADRMLDMGFQDAIDAIIRQAPARR 179

Query: 179 QTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQL 238
           QTLLFSAT  + +  +S+ F ++P  ++V +       IE  F        ++   LQ+L
Sbjct: 180 QTLLFSATYPEGIAAISQRFQRDPVEVKVESTHD-LPAIEQRFYEV--SPDERLPALQRL 236

Query: 239 L---QSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGT 295
           L   Q +      ++FCN KK    +  +L  QGFS  A+HG+++QR R ++L  F   +
Sbjct: 237 LLHHQPESC----VVFCNTKKECQEVADALNAQGFSALALHGDLEQRDRDQVLVRFANRS 292

Query: 296 IQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIK 355
             ++VA+D+AARGLDI  +  V N+++    E ++HRIGRTGRAG  G A +LVA E+++
Sbjct: 293 CSVLVATDVAARGLDIKALEAVINYELARDPEVHVHRIGRTGRAGSKGLALSLVAPEEMQ 352

Query: 356 HIDAIEKLIEKKVDWLNGDLSSLNP 380
             +AIE  + +K++W    L SL+P
Sbjct: 353 RANAIEDYLGRKLNW--EPLPSLSP 375