RPSBLAST alignment for GI: 254780382 and conserved domain: PRK11776
>gnl|CDD|183308 PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional. Length = 460
Score = 344 bits (884), Expect = 4e-95
Identities = 155/385 (40%), Positives = 227/385 (58%), Gaps = 18/385 (4%)
Query: 1 MDFADLGLSPKVVCAVLDA-GYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPM 59
F+ L L P ++ A L+ GY + TPIQ +++P +L DV A+TG+GKTA+F L +
Sbjct: 4 TAFSTLPLPPALL-ANLNELGYTEMTPIQAQSLPAILAGKDVIAQAKTGSGKTAAFGLGL 62
Query: 60 LTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN-YNLTVALLIGGIPFEAQNKK 118
L L+ R RV+ L+L PTRELA QVA + + N+ V L GG+P Q
Sbjct: 63 LQKLDVKRFRVQ---ALVLCPTRELADQVAKEIRRLARFIPNIKVLTLCGGVPMGPQIDS 119
Query: 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178
LE GA +++ TPGRILDH +G L ++ + LV+DEADRMLDMGF I I P R
Sbjct: 120 LEHGAHIIVGTPGRILDHLRKGTLDLDALNTLVLDEADRMLDMGFQDAIDAIIRQAPARR 179
Query: 179 QTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQL 238
QTLLFSAT + + +S+ F ++P ++V + IE F ++ LQ+L
Sbjct: 180 QTLLFSATYPEGIAAISQRFQRDPVEVKVESTHD-LPAIEQRFYEV--SPDERLPALQRL 236
Query: 239 L---QSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGT 295
L Q + ++FCN KK + +L QGFS A+HG+++QR R ++L F +
Sbjct: 237 LLHHQPESC----VVFCNTKKECQEVADALNAQGFSALALHGDLEQRDRDQVLVRFANRS 292
Query: 296 IQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIK 355
++VA+D+AARGLDI + V N+++ E ++HRIGRTGRAG G A +LVA E+++
Sbjct: 293 CSVLVATDVAARGLDIKALEAVINYELARDPEVHVHRIGRTGRAGSKGLALSLVAPEEMQ 352
Query: 356 HIDAIEKLIEKKVDWLNGDLSSLNP 380
+AIE + +K++W L SL+P
Sbjct: 353 RANAIEDYLGRKLNW--EPLPSLSP 375