RPSBLAST alignment for GI: 254780382 and conserved domain: COG0514
>gnl|CDD|30860 COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]. Length = 590
Score = 110 bits (275), Expect = 1e-24
Identities = 88/354 (24%), Positives = 140/354 (39%), Gaps = 31/354 (8%)
Query: 20 GYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILE 79
GY P Q + I +L D + TG GK+ + +P A + TL++
Sbjct: 14 GYASFRPGQQEIIDALLSGKDTLVVMPTGGGKSLCYQIP---------ALLLEGLTLVVS 64
Query: 80 PTRELAA-QVADNFEKYGKNYNLTVALLIGGIPFEAQN---KKLERGA-DVLICTPGRIL 134
P L QV + + A L + E + +L+ G +L +P R++
Sbjct: 65 PLISLMKDQVDQL-----EAAGIRAAYLNSTLSREERQQVLNQLKSGQLKLLYISPERLM 119
Query: 135 DHFNRGKLLMNNIEILVIDEADRMLDMG--FIPYIQNITSLVP-FTRQTLL-FSATMTDE 190
L I ++ IDEA + G F P + + L +L +AT T
Sbjct: 120 SPRFLELLKRLPISLVAIDEAHCISQWGHDFRPDYRRLGRLRAGLPNPPVLALTATATPR 179
Query: 191 LQK--VSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLLQSQDTMKNG 248
++ + LQ+ S + V + L L Q K+G
Sbjct: 180 VRDDIREQLGLQDANIFRG---SFDRPNLALKVVEKGEPSDQLAFLATVLPQLS---KSG 233
Query: 249 IIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARG 308
II+C +K V L L K G S A H + R ++ F I++MVA++ G
Sbjct: 234 IIYCLTRKKVEELAEWLRKNGISAGAYHAGLSNEERERVQQAFLNDEIKVMVATNAFGMG 293
Query: 309 LDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEK 362
+D PDV V ++D+P E+Y GR GR G +A L + EDI+ + +
Sbjct: 294 IDKPDVRFVIHYDLPGSIESYYQETGRAGRDGLPAEAILLYSPEDIRWQRYLIE 347