RPSBLAST alignment for GI: 254780382 and conserved domain: COG1643

>gnl|CDD|31829 COG1643, HrpA, HrpA-like helicases [DNA replication, recombination, and repair]. Length = 845
 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 82/383 (21%), Positives = 154/383 (40%), Gaps = 52/383 (13%)

Query: 35  VLQRHDVCGI-AQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNF- 92
            ++++ V  I  +TG+GKT    LP   +LE+G            +P R LAA+      
Sbjct: 61  AIEQNQVVIIVGETGSGKTTQ--LP-QFLLEEGLGIAGK--IGCTQP-RRLAARSVAERV 114

Query: 93  -EKYGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILV 151
            E+ G+    TV   I    FE++     R   + + T G +L       LL +   +++
Sbjct: 115 AEELGEKLGETVGYSI---RFESKVSPRTR---IKVMTDGILLREIQNDPLL-SGYSVVI 167

Query: 152 IDEA-DRMLDMGFI-PYIQNITSLVPFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNT 209
           IDEA +R L+   +   ++++ +      + ++ SAT+    ++ S  F   P  IE+  
Sbjct: 168 IDEAHERSLNTDILLGLLKDLLARRRDDLKLIIMSATLDA--ERFSAYFGNAP-VIEIEG 224

Query: 210 PSSTAETI-EHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQ 268
            +   E        A Y       A +   L+      + ++F   ++ +      LEK 
Sbjct: 225 RTYPVEIRYLPEAEADYILLDAIVAAVDIHLREGS--GSILVFLPGQREIERTAEWLEKA 282

Query: 269 ----GFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPN 324
                  +  ++G +    ++++      G  ++++A+++A   L IP + +V +  +  
Sbjct: 283 ELGDDLEILPLYGALSAEEQVRVFEPAPGGKRKVVLATNIAETSLTIPGIRYVIDSGL-A 341

Query: 325 RAENYIHRIG----------------RTGRAGR--HGKAFTLVAKEDIKHIDAIEKLIEK 366
           + + Y  R G                R GRAGR   G  + L ++ED             
Sbjct: 342 KEKRYDPRTGLTRLETEPISKASADQRAGRAGRTGPGICYRLYSEEDFLAFPE-----FT 396

Query: 367 KVDWLNGDLSSLNPPLEKIDIAQ 389
             + L  DLS L   L+ + I Q
Sbjct: 397 LPEILRTDLSGLVLQLKSLGIGQ 419