RPSBLAST alignment for GI: 254780382 and conserved domain: COG1643
>gnl|CDD|31829 COG1643, HrpA, HrpA-like helicases [DNA replication, recombination, and repair]. Length = 845
Score = 49.6 bits (118), Expect = 2e-06
Identities = 82/383 (21%), Positives = 154/383 (40%), Gaps = 52/383 (13%)
Query: 35 VLQRHDVCGI-AQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNF- 92
++++ V I +TG+GKT LP +LE+G +P R LAA+
Sbjct: 61 AIEQNQVVIIVGETGSGKTTQ--LP-QFLLEEGLGIAGK--IGCTQP-RRLAARSVAERV 114
Query: 93 -EKYGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILV 151
E+ G+ TV I FE++ R + + T G +L LL + +++
Sbjct: 115 AEELGEKLGETVGYSI---RFESKVSPRTR---IKVMTDGILLREIQNDPLL-SGYSVVI 167
Query: 152 IDEA-DRMLDMGFI-PYIQNITSLVPFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNT 209
IDEA +R L+ + ++++ + + ++ SAT+ ++ S F P IE+
Sbjct: 168 IDEAHERSLNTDILLGLLKDLLARRRDDLKLIIMSATLDA--ERFSAYFGNAP-VIEIEG 224
Query: 210 PSSTAETI-EHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQ 268
+ E A Y A + L+ + ++F ++ + LEK
Sbjct: 225 RTYPVEIRYLPEAEADYILLDAIVAAVDIHLREGS--GSILVFLPGQREIERTAEWLEKA 282
Query: 269 ----GFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPN 324
+ ++G + ++++ G ++++A+++A L IP + +V + +
Sbjct: 283 ELGDDLEILPLYGALSAEEQVRVFEPAPGGKRKVVLATNIAETSLTIPGIRYVIDSGL-A 341
Query: 325 RAENYIHRIG----------------RTGRAGR--HGKAFTLVAKEDIKHIDAIEKLIEK 366
+ + Y R G R GRAGR G + L ++ED
Sbjct: 342 KEKRYDPRTGLTRLETEPISKASADQRAGRAGRTGPGICYRLYSEEDFLAFPE-----FT 396
Query: 367 KVDWLNGDLSSLNPPLEKIDIAQ 389
+ L DLS L L+ + I Q
Sbjct: 397 LPEILRTDLSGLVLQLKSLGIGQ 419