RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0326
>gnl|CDD|35547 KOG0326, KOG0326, KOG0326, ATP-dependent RNA helicase [RNA processing and modification]. Length = 459
Score = 220 bits (562), Expect = 5e-58
Identities = 116/367 (31%), Positives = 197/367 (53%), Gaps = 7/367 (1%)
Query: 2 DFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLT 61
+F D L +++ + + G+ KP+PIQ ++IP+ L D+ A+ GTGKTA++ +P+L
Sbjct: 86 EFEDYCLKRELLMGIFEKGFEKPSPIQEESIPIALTGRDILARAKNGTGKTAAYCIPVLE 145
Query: 62 ILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLER 121
++ + ++ +IL PTRELA Q + ++ K+ + V + GG +L +
Sbjct: 146 KIDPKKNVIQ---AIILVPTRELALQTSQVCKELSKHLGIKVMVTTGGTSLRDDIMRLNQ 202
Query: 122 GADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTL 181
+++ TPGRILD +G +++ ILV+DEAD++L + F P ++ + S +P RQ L
Sbjct: 203 TVHLVVGTPGRILDLAKKGVADLSDCVILVMDEADKLLSVDFQPIVEKLISFLPKERQIL 262
Query: 182 LFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLLQS 241
L+SAT ++ + L+ P I + + ++ + + +K L L S
Sbjct: 263 LYSATFPLTVKGFMDRHLKKPYEINLMEELTLKGVTQY---YAFVEERQKVHCLNTLF-S 318
Query: 242 QDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVA 301
+ + IIFCN V L + + G+S IH + Q R ++ +F+ G + +V
Sbjct: 319 KLQINQSIIFCNSTNRVELLAKKITELGYSCYYIHAKMAQEHRNRVFHDFRNGKCRNLVC 378
Query: 302 SDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIE 361
+DL RG+DI V V NFD P AE Y+HRIGR+GR G G A L+ ED ++ IE
Sbjct: 379 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITYEDRFNLYRIE 438
Query: 362 KLIEKKV 368
+ + ++
Sbjct: 439 QELGTEI 445