RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0328
>gnl|CDD|35549 KOG0328, KOG0328, KOG0328, Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily [Translation, ribosomal structure and biogenesis]. Length = 400
Score = 263 bits (673), Expect = 7e-71
Identities = 138/376 (36%), Positives = 213/376 (56%), Gaps = 5/376 (1%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
F D+GL ++ + G+ KP+ IQ + IP +L+ DV AQ+GTGKTA+F + +L
Sbjct: 29 FDDMGLKEDLLRGIYAYGFEKPSAIQQRAIPQILKGRDVIAQAQSGTGKTATFSISVLQS 88
Query: 63 LEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERG 122
L+ VR + LIL PTRELA Q+ G N+ IGG KKL+ G
Sbjct: 89 LD---ISVRETQALILSPTRELAVQIQKVILALGDYMNVQCHACIGGKNLGEDIKKLDYG 145
Query: 123 ADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLL 182
V+ TPGR+LD R L +++LV+DEAD ML+ GF I +I +P Q +L
Sbjct: 146 QHVVSGTPGRVLDMIKRRSLRTRAVKMLVLDEADEMLNKGFKEQIYDIYRYLPPGAQVVL 205
Query: 183 FSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLLQSQ 242
SAT+ E+ +++E F+ +P RI V T E I+ FVA + K L L
Sbjct: 206 VSATLPHEILEMTEKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCD--LYDT 263
Query: 243 DTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVAS 302
T+ +IFCN K+ V L + + F+V ++HG+++Q+ R KI+++F+ G ++++ +
Sbjct: 264 LTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMEQKERDKIMNDFRSGKSRVLITT 323
Query: 303 DLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEK 362
D+ ARG+D+ V V N+D+PN E YIHRIGR+GR GR G A V +D++ + IE+
Sbjct: 324 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDLRILRDIEQ 383
Query: 363 LIEKKVDWLNGDLSSL 378
++D + +++ L
Sbjct: 384 YYSTQIDEMPMNVADL 399