RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0330

>gnl|CDD|35551 KOG0330, KOG0330, KOG0330, ATP-dependent RNA helicase [RNA processing and modification]. Length = 476
 Score =  310 bits (796), Expect = 4e-85
 Identities = 147/392 (37%), Positives = 226/392 (57%), Gaps = 7/392 (1%)

Query: 1   MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60
             FADLG+ P+++ A  + G+ KPT IQ + IP+ L   DV G+A+TG+GKT +F LP+L
Sbjct: 61  KSFADLGVHPELLEACQELGWKKPTKIQSEAIPVALGGRDVIGLAETGSGKTGAFALPIL 120

Query: 61  TILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLE 120
             L +     ++   L+L PTRELA Q+A+ FE  G    L VA+L+GG+    Q  +L 
Sbjct: 121 QRLLQEP---KLFFALVLTPTRELAQQIAEQFEALGSGIGLRVAVLVGGMDMMLQANQLS 177

Query: 121 RGADVLICTPGRILDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQ 179
           +   +L+ TPGR+ DH    K   +  ++ LV+DEADR+LDM F   +  I  ++P  RQ
Sbjct: 178 KKPHILVATPGRLWDHLENTKGFSLEQLKFLVLDEADRLLDMDFEEELDYILKVIPRERQ 237

Query: 180 TLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLL 239
           T LFSATMT +++K+    L NP ++ V++   T + ++  ++    +  K   L+  L 
Sbjct: 238 TFLFSATMTKKVRKLQRASLDNPVKVAVSSKYQTVDHLKQTYLFVPGKD-KDTYLVYLL- 295

Query: 240 QSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLM 299
            ++    + I+FCN       L   L   GF    +HG + Q  R+  L+ FK G   ++
Sbjct: 296 -NELAGNSVIVFCNTCNTTRFLALLLRNLGFQAIPLHGQMSQSKRLGALNKFKAGARSIL 354

Query: 300 VASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDA 359
           V +D+A+RGLDIP V  V N+D+P  +++YIHR+GRT RAGR GKA TLV + D++ +  
Sbjct: 355 VCTDVASRGLDIPHVDVVVNYDIPTHSKDYIHRVGRTARAGRSGKAITLVTQYDVELVQR 414

Query: 360 IEKLIEKKVDWLNGDLSSLNPPLEKIDIAQHN 391
           IE  + KK+     D + +    E++  AQ  
Sbjct: 415 IEHALGKKLPEYKVDKNEVMSLNERVAEAQKE 446