RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0331

>gnl|CDD|35552 KOG0331, KOG0331, KOG0331, ATP-dependent RNA helicase [RNA processing and modification]. Length = 519
 Score =  334 bits (858), Expect = 3e-92
 Identities = 151/374 (40%), Positives = 219/374 (58%), Gaps = 10/374 (2%)

Query: 2   DFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLT 61
            F +LGLS +++ A+ + G+ KPTPIQ +  P+ L   D+ GIA+TG+GKT +++LP + 
Sbjct: 92  AFQELGLSEELMKALKEQGFEKPTPIQAQGWPIALSGRDLVGIARTGSGKTLAYLLPAIV 151

Query: 62  ILEKGRA---RVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK 118
            L   +    R   P  L+L PTRELA QV     ++GK+  L    + GG P   Q + 
Sbjct: 152 HLNNEQGKLSRGDGPIVLVLAPTRELAVQVQAEAREFGKSLRLRSTCVYGGAPKGPQLRD 211

Query: 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITS-LVPFT 177
           LERG DV+I TPGR++D    G L ++ +  LV+DEADRMLDMGF P I+ I S +    
Sbjct: 212 LERGVDVVIATPGRLIDLLEEGSLNLSRVTYLVLDEADRMLDMGFEPQIRKILSQIPRPD 271

Query: 178 RQTLLFSATMTDELQKVSENFLQNPKRIEV--NTPSSTAETIEHCFVATYAQYSKKCALL 235
           RQTL+FSAT   E+++++E+FL NP +I V           I    +      + K   L
Sbjct: 272 RQTLMFSATWPKEVRQLAEDFLNNPIQINVGNKKELKANHNIRQ--IVEVCDETAKLRKL 329

Query: 236 QQLLQSQDTMKNG--IIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKE 293
            +LL+   +   G  IIFC  K+    L  +L ++G+   AIHG+  Q  R  +L  F+E
Sbjct: 330 GKLLEDISSDSEGKVIIFCETKRTCDELARNLRRKGWPAVAIHGDKSQSERDWVLKGFRE 389

Query: 294 GTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKED 353
           G   ++VA+D+AARGLD+PDV  V N+D PN  E+Y+HRIGRTGRAG+ G A T    ++
Sbjct: 390 GKSPVLVATDVAARGLDVPDVDLVINYDFPNNVEDYVHRIGRTGRAGKKGTAITFFTSDN 449

Query: 354 IKHIDAIEKLIEKK 367
            K    + K++ + 
Sbjct: 450 AKLARELIKVLREA 463