RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0335

>gnl|CDD|35556 KOG0335, KOG0335, KOG0335, ATP-dependent RNA helicase [RNA processing and modification]. Length = 482
 Score =  266 bits (682), Expect = 9e-72
 Identities = 136/396 (34%), Positives = 214/396 (54%), Gaps = 25/396 (6%)

Query: 2   DFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLT 61
            F +  L   +   +  +GY KPTP+Q  +IP++    D+   AQTG+GKTA+F++P+++
Sbjct: 75  TFDEAILGEALAGNIKRSGYTKPTPVQKYSIPIISGGRDLMACAQTGSGKTAAFLIPIIS 134

Query: 62  ILEKGR-------ARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEA 114
            L                PR LIL PTREL  Q+ +   K+     +   ++ GG    A
Sbjct: 135 YLLDEGPEDRGESGGGVYPRALILAPTRELVDQIYNEARKFSYLSGMKSVVVYGGTDLGA 194

Query: 115 QNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLD-MGFIPYIQNI--- 170
           Q + ++RG D+L+ TPGR+ D   RGK+ ++N + LV+DEADRMLD MGF P I+ I   
Sbjct: 195 QLRFIKRGCDILVATPGRLKDLIERGKISLDNCKFLVLDEADRMLDEMGFEPQIRKIVEQ 254

Query: 171 -TSLVPFTRQTLLFSATMTDELQKVSENFL-QNPKRIEVNTPSSTAETIEHCFVATYAQY 228
                   RQTLLFSAT   E+Q+++ +FL  N   + V    ST+E I    +    + 
Sbjct: 255 LGMPPKNNRQTLLFSATFPKEIQRLAADFLKDNYIFLAVGRVGSTSENITQKILFVN-EM 313

Query: 229 SKKCALLQQLLQSQDTMKNG-------IIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQ 281
            K+  LL  L +      +G       ++F   K+    L   L   G+   +IHG+  Q
Sbjct: 314 EKRSKLLDLLNKDDGPPSDGEPKWEKTLVFVETKRGADELAAFLSSNGYPAKSIHGDRTQ 373

Query: 282 RSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGR 341
             R + L++F+ G   ++VA+++AARGLDIP+V HV N+D+P   ++Y+HRIGRTGR G 
Sbjct: 374 IEREQALNDFRNGKAPVLVATNVAARGLDIPNVKHVINYDMPADIDDYVHRIGRTGRVGN 433

Query: 342 HGKAFTLVAKEDIKHIDAIEKLIEK----KVDWLNG 373
            G+A +   +++     A+ +++ +       WL+ 
Sbjct: 434 GGRATSFFNEKNQNIAKALVEILTEANQEVPQWLSE 469