RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0337
>gnl|CDD|35558 KOG0337, KOG0337, KOG0337, ATP-dependent RNA helicase [RNA processing and modification]. Length = 529
Score = 241 bits (616), Expect = 3e-64
Identities = 132/354 (37%), Positives = 205/354 (57%), Gaps = 4/354 (1%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
F +GL KV+ A+ G+ PTPIQ KTIPL+L+ DV G+A+TG+GKTA+F++PM+
Sbjct: 23 FQSMGLDYKVLRAIHKKGFNTPTPIQRKTIPLILEGRDVVGMARTGSGKTAAFLIPMIEK 82
Query: 63 LEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERG 122
L K ++ + R LIL PTRELA Q + G+ L +LL+GG E Q L
Sbjct: 83 L-KSHSQTGL-RALILSPTRELALQTLKVVKDLGRGTKLRQSLLVGGDSIEEQFILLNEN 140
Query: 123 ADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLL 182
D++I TPGR+L L ++++E +V DEADR+ +MGF + I S +P +RQTLL
Sbjct: 141 PDIIIATPGRLLHLGVEMTLTLSSVEYVVFDEADRLFEMGFQEQLHEILSRLPESRQTLL 200
Query: 183 FSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLLQSQ 242
FSAT+ +L ++ L P + ++ + +E ++ F + ++K A L +L +
Sbjct: 201 FSATLPRDLVDFAKAGLVPPVLVRLDVETKISELLKVRFF--RVRKAEKEAALLSILGGR 258
Query: 243 DTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVAS 302
K I+F K +V + L G I+ ++DQ +R +F+ ++V +
Sbjct: 259 IKDKQTIVFVATKHHVEYVRGLLRDFGGEGSDIYSSLDQEARKINGRDFRGRKTSILVVT 318
Query: 303 DLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKH 356
D+AARGLDIP + +V N+D P + ++HR+GR RAGR G+A++LVA D +
Sbjct: 319 DVAARGLDIPLLDNVINYDFPPDDKLFVHRVGRVARAGRTGRAYSLVASTDDPY 372