RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0344
>gnl|CDD|35565 KOG0344, KOG0344, KOG0344, ATP-dependent RNA helicase [RNA processing and modification]. Length = 593
Score = 187 bits (475), Expect = 8e-48
Identities = 127/375 (33%), Positives = 197/375 (52%), Gaps = 20/375 (5%)
Query: 5 DLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILE 64
D ++ +++ + + G+ +PTPIQ + IP+ L++ DV A TG+GKT +F LP+L L
Sbjct: 140 DYSMNKRLLENLQELGFDEPTPIQKQAIPVFLEKRDVLACAPTGSGKTLAFNLPILQHL- 198
Query: 65 KGRARVRMP---RTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK--- 118
K ++ + R LIL PTRELAAQ+ KY + + +L A +
Sbjct: 199 KDLSQEKHKVGLRALILSPTRELAAQIYREMRKY--SIDEGTSLRAAQFSKPAYPSQKPA 256
Query: 119 --LERGADVLICTPGRILDHFNRGKLLMN--NIEILVIDEADRMLD-MGFIPYIQNITSL 173
+ D+LI TP RI+ GKL ++ +E LV+DEAD + + F+ + +I S
Sbjct: 257 FLSDEKYDILISTPMRIVGLLGLGKLNIDLSKVEWLVVDEADLLFEPEFFVEQLADIYSA 316
Query: 174 V--PFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKK 231
P R L FSAT++ +++ +E + KR+ V +S ET++ V ++ K
Sbjct: 317 CQSPDIRVAL-FSATISVYVEEWAELIKSDLKRVIVGLRNSANETVDQELVFCGSEKGKL 375
Query: 232 CALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEK-QGFSVCAIHGNIDQRSRMKILSN 290
AL Q L + +IF K+ L LE +V IHG Q+ R + +
Sbjct: 376 LALRQ--LVASGFKPPVLIFVQSKERAKQLFEELEIYDNINVDVIHGERSQKQRDETMER 433
Query: 291 FKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVA 350
F+ G I +++ +DL ARG+D V V N+D P +YIHRIGRTGRAGR GKA T
Sbjct: 434 FRIGKIWVLICTDLLARGIDFKGVNLVINYDFPQSDLSYIHRIGRTGRAGRSGKAITFYT 493
Query: 351 KEDIKHIDAIEKLIE 365
+D+ I +I +++E
Sbjct: 494 DQDMPRIRSIAEVME 508